View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF10145A_low_155 (Length: 336)
Name: NF10145A_low_155
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr2 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 42664748 - 42665074
Alignment:
| Q | 1 | ggctttgttactgcattattaatatattatagatcaatgcccccacccc-ggataaaatacataatttttgcttcttatgcttgtggcttaaggtaaatg | 99 | Q |
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| T | 42664748 | ggctttgttactgcattattaatatattatagatcaatgcccccacccccggataaaatacataatttttgcttcttatgcttgtggcttaaggtaaatg | 42664847 | T |
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| Q | 100 | tgggtactaccaagcaactccatacaatctgttatcttcaagcggagaactcgtctcgaaagactactccattaggctggagcattccttggcttatatg | 199 | Q |
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| T | 42664848 | tgggtactaccaagcaactccatacaatctgttatcttcaagcggagaactcgtctcgaaagactactccattaggctggagcattccttggcttataag | 42664947 | T |
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| Q | 200 | cttcatttattaaacaagactctttaatatggggttcagcaaggcaccaccgtttgatcgtcgacatcctcgacggtttctcttccaacccttcacctcg | 299 | Q |
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| T | 42664948 | cttcatttattaaacaagactctttaatatggggttcaacaatgcaccaccatttgagcgtcgacatcctcgacggtttcacttccaacacttcacctcg | 42665047 | T |
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| Q | 300 | ttggccataaccctttattggcttcat | 326 | Q |
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| T | 42665048 | ttggccataaccctctattggcttcat | 42665074 | T |
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