View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_157 (Length: 335)

Name: NF10145A_low_157
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_157
NF10145A_low_157
[»] chr7 (12 HSPs)
chr7 (17-314)||(23983290-23983588)
chr7 (33-160)||(22567843-22567970)
chr7 (34-146)||(28534243-28534355)
chr7 (91-188)||(36449287-36449383)
chr7 (78-206)||(9427879-9428007)
chr7 (78-306)||(24324557-24324787)
chr7 (133-236)||(9107308-9107410)
chr7 (78-113)||(48058442-48058477)
chr7 (80-118)||(9107408-9107446)
chr7 (78-242)||(31409760-31409925)
chr7 (86-181)||(1321012-1321109)
chr7 (78-188)||(42533018-42533129)
[»] chr2 (26 HSPs)
chr2 (17-314)||(16952081-16952380)
chr2 (17-314)||(17022746-17023045)
chr2 (62-314)||(17060098-17060351)
chr2 (78-332)||(10173339-10173593)
chr2 (124-245)||(20572226-20572346)
chr2 (33-147)||(25504639-25504754)
chr2 (81-160)||(13699066-13699144)
chr2 (80-177)||(27879913-27880011)
chr2 (17-115)||(24308447-24308550)
chr2 (78-181)||(12343037-12343139)
chr2 (81-151)||(4974992-4975063)
chr2 (81-151)||(4992900-4992971)
chr2 (78-178)||(7696184-7696283)
chr2 (220-306)||(34230292-34230378)
chr2 (62-205)||(27740153-27740293)
chr2 (78-175)||(15126186-15126283)
chr2 (78-159)||(22884913-22884991)
chr2 (21-177)||(2063078-2063218)
chr2 (78-113)||(15360985-15361020)
chr2 (62-205)||(33788393-33788535)
chr2 (93-205)||(43816249-43816359)
chr2 (81-181)||(1269698-1269797)
chr2 (21-94)||(20572339-20572413)
chr2 (83-139)||(37770413-37770469)
chr2 (101-176)||(41086572-41086648)
chr2 (83-135)||(41113502-41113554)
[»] chr5 (15 HSPs)
chr5 (21-323)||(17853773-17854073)
chr5 (33-147)||(8731153-8731268)
chr5 (78-253)||(26045723-26045901)
chr5 (78-160)||(39183963-39184044)
chr5 (80-177)||(24072047-24072142)
chr5 (78-188)||(14302203-14302314)
chr5 (78-170)||(33109957-33110050)
chr5 (79-138)||(7682815-7682874)
chr5 (78-132)||(30097600-30097654)
chr5 (78-119)||(7195060-7195101)
chr5 (104-188)||(33258665-33258750)
chr5 (81-178)||(8297694-8297790)
chr5 (82-113)||(22675101-22675132)
chr5 (78-125)||(26405307-26405354)
chr5 (132-180)||(39024259-39024306)
[»] chr1 (22 HSPs)
chr1 (80-314)||(16577344-16577579)
chr1 (66-177)||(38548824-38548934)
chr1 (21-177)||(38544457-38544613)
chr1 (17-303)||(41126188-41126462)
chr1 (91-187)||(16148987-16149083)
chr1 (78-181)||(32882584-32882688)
chr1 (33-160)||(17033810-17033937)
chr1 (78-181)||(34775089-34775193)
chr1 (78-157)||(46603606-46603683)
chr1 (78-160)||(42374386-42374467)
chr1 (87-205)||(49820311-49820427)
chr1 (57-105)||(17993861-17993909)
chr1 (63-115)||(37200386-37200438)
chr1 (78-138)||(46768437-46768497)
chr1 (24-126)||(26602553-26602656)
chr1 (220-306)||(16147649-16147735)
chr1 (78-188)||(10785221-10785330)
chr1 (17-64)||(16577581-16577628)
chr1 (77-205)||(40934044-40934169)
chr1 (81-119)||(6583014-6583052)
chr1 (153-181)||(24659146-24659174)
chr1 (98-180)||(31290799-31290880)
[»] chr6 (9 HSPs)
chr6 (78-314)||(32935102-32935337)
chr6 (23-205)||(33968340-33968518)
chr6 (17-144)||(17278199-17278326)
chr6 (78-126)||(15120362-15120410)
chr6 (78-118)||(16180675-16180715)
chr6 (78-113)||(13098347-13098382)
chr6 (101-181)||(20701583-20701664)
chr6 (223-306)||(20701710-20701793)
chr6 (132-240)||(21266263-21266369)
[»] chr4 (13 HSPs)
chr4 (78-236)||(12296322-12296480)
chr4 (81-266)||(19673231-19673420)
chr4 (83-188)||(22810925-22811029)
chr4 (64-119)||(43373852-43373907)
chr4 (79-177)||(46487477-46487575)
chr4 (78-181)||(41117727-41117829)
chr4 (78-188)||(49747739-49747849)
chr4 (78-309)||(19814978-19815213)
chr4 (78-181)||(38636993-38637095)
chr4 (81-188)||(48098546-48098651)
chr4 (94-173)||(20632261-20632339)
chr4 (78-113)||(28967136-28967171)
chr4 (81-188)||(19311128-19311236)
[»] scaffold1613 (1 HSPs)
scaffold1613 (21-177)||(736-892)
[»] chr8 (10 HSPs)
chr8 (21-112)||(25184861-25184953)
chr8 (78-181)||(10248326-10248430)
chr8 (80-222)||(17720486-17720626)
chr8 (33-231)||(15906839-15907037)
chr8 (78-187)||(17656495-17656606)
chr8 (64-119)||(30235877-30235932)
chr8 (67-119)||(41791017-41791069)
chr8 (86-188)||(12197842-12197945)
chr8 (86-188)||(12442270-12442373)
chr8 (17-119)||(1760888-1760992)
[»] chr3 (20 HSPs)
chr3 (62-205)||(27399140-27399282)
chr3 (24-180)||(823141-823297)
chr3 (62-177)||(25594292-25594406)
chr3 (78-179)||(37123601-37123703)
chr3 (17-161)||(45354645-45354790)
chr3 (82-151)||(12086489-12086559)
chr3 (64-120)||(1652636-1652692)
chr3 (82-181)||(14194152-14194248)
chr3 (89-145)||(32010016-32010072)
chr3 (17-239)||(13018024-13018246)
chr3 (163-306)||(39021122-39021267)
chr3 (129-188)||(14879648-14879708)
chr3 (80-160)||(40689518-40689597)
chr3 (80-177)||(46358167-46358266)
chr3 (62-115)||(16266000-16266052)
chr3 (156-201)||(23328188-23328233)
chr3 (66-181)||(25647905-25648017)
chr3 (104-179)||(28937498-28937574)
chr3 (101-180)||(33143733-33143813)
chr3 (82-188)||(50518852-50518956)
[»] scaffold0050 (1 HSPs)
scaffold0050 (82-188)||(36920-37024)
[»] scaffold0499 (1 HSPs)
scaffold0499 (78-113)||(6828-6863)
[»] scaffold0063 (1 HSPs)
scaffold0063 (89-188)||(58339-58439)
[»] scaffold0119 (1 HSPs)
scaffold0119 (81-181)||(41905-42004)


Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 23983588 - 23983290
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  23983588 acatcataaaagacatccctacacacaacacctagtcataccttaccttcaacacacatgaggacaacacccaccaaaataaacaccaccacctaaaaca 23983489  T
Q  116 gacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcc 215  Q
    |||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  23983488 gactcattcacgaaaacaaccactgaaaaacgatatacataactacccatcatcactactcaccccaaaagaagaccgctctaaatgaaattctcggtcc 23983389  T
Q  216 tcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaacacaaaaa 314  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||||||||    
T  23983388 tcatcatcaaagctgaaccagatccgaaaagctcatattcgaaagatcattcaactgtcaccacctctcaacctccgatacaccgaaagaacacaaaaa 23983290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 22567843 - 22567970
Alignment:
Q  33 ccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaa 131  Q
    |||||||||||| ||||||||| ||||||| |||||||| | ||  ||||||| ||||||||||| ||||||||||||||||||||||  |||||| |||    
T  22567843 ccctacacacaacacctagtcaaaccctaccttcaacacccctagggacaacatccaccaaaatacacatcaccacctaaaacagactctttcacg-aaa 22567941  T
Q  132 cgaccactgaaaaacgatatacataacca 160  Q
    | |||||||||||||| ||| ||||||||    
T  22567942 caaccactgaaaaacggtatccataacca 22567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 28534243 - 28534355
Alignment:
Q  34 cctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaac 132  Q
    ||||||||||| | |||| || ||||||| |||||||| | | | ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  28534243 cctacacacaacaactagccaaaccctaccttcaacacccctgaggacaacacccaccaaaataaacatcaccacctaaaacagactctttcacg-aaac 28534341  T
Q  133 gaccactgaaaaac 146  Q
    ||||||||||||||    
T  28534342 gaccactgaaaaac 28534355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 36449383 - 36449287
Alignment:
Q  91 aaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 188  Q
    ||||||||||||||||||||||| |||||  |||||| |||| ||| |||||||||||||| ||||||||| ||||||||||||||||| | ||||||    
T  36449383 aaaataaacatcaccacctaaaatagactacttcacg-aaacaaccgctgaaaaacgatatccataaccactcatcgtcactactcaccacaaaagaa 36449287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 9427879 - 9428007
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
    ||||||||| ||||||||||||||||| |||||||||| | |  |||||| | || |||||| ||||| ||||| ||||||||||| |||||||||||||    
T  9427879 gacaacacctaccaaaataaacatcactacctaaaacaaattctttcacgaagacaaccactaaaaaatgatatccataaccacccgtcgtcactactca 9427978  T
Q  178 ccccgaaagaagaccgctctaaatgaaat 206  Q
     ||| ||| |  | | |||||||||||||    
T  9427979 tccctaaatagcatccctctaaatgaaat 9428007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 306
Target Start/End: Original strand, 24324557 - 24324787
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacg-taaacgaccactg-aaaaacgatatacataaccacccatcgtcactact 175  Q
    |||||||| |||||||||| || ||||||| |||||||||||  ||||||  ||||||||| || || |||||||| |  ||||| ||||||||||||||    
T  24324557 gacaacactcaccaaaatacacgtcaccacttaaaacagactccttcacgaaaaacgaccattgtaagaacgatatcc--aacca-ccatcgtcactact 24324653  T
Q  176 caccccgaaag---aagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgcta 272  Q
    |||||| ||||   || ||| ||| |||| ||| ||||  |||| | |||||||| ||| ||||| ||||||| ||| ||  ||||| ||||||| |||     
T  24324654 cacccctaaagaaaaacacccctcaaaataaaactctccgtcctgaacaccaaagctgagccacagccgaaaagctcctaaccgaaagatcattcagctt 24324753  T
Q  273 tcaccccctctcaacctccgatacaccgaaagaa 306  Q
     |||| || ||| ||||||||| |||| ||||||    
T  24324754 ccaccacccctcgacctccgatccacctaaagaa 24324787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 9107410 - 9107308
Alignment:
Q  133 gaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaa 232  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||| ||| ||| ||  || ||||||||||||  | | ||||||||||||||||||||     
T  9107410 gaccattggaaaacgatatccataaccacccatcgccactactcatcccaaaataactcccctctaaatgaaacac-ccatcctcatcaccaaagttgag 9107312  T
Q  233 ccac 236  Q
    ||||    
T  9107311 ccac 9107308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 48058442 - 48058477
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  48058442 gacaacacccaccaaaataaacatcaccacctaaaa 48058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 9107446 - 9107408
Alignment:
Q  80 caacacccaccaaaataaacatcaccacctaaaacagac 118  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9107446 caacacccaccaaaataagcatcaccacctaaaacagac 9107408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 242
Target Start/End: Original strand, 31409760 - 31409925
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacat-aaccacccatcgtcactact 175  Q
    |||||||||| ||||||||||||||| ||| |||||||||||  ||||   ||||||||| || |||||  |||| ||| ||| |||||| | ||| |||    
T  31409760 gacaacaccctccaaaataaacatcatcacataaaacagactccttca-aaaaacgaccattgaaaaaataatatccataaactacccattgccaccact 31409858  T
Q  176 caccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccga 242  Q
    |||||| |||||| |||  | |||||||||  | ||||| ||  ||||||| |||||||||||||||    
T  31409859 caccccaaaagaacacccgtataaatgaaacacccgatcatccacaccaaaattgaaccacatccga 31409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 1321109 - 1321012
Alignment:
Q  86 ccaccaaaataaacatcaccacctaaaacagacttatt-cacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 181  Q
    ||||||||||| |||||||||||||||||||||   || |||| || | ||||||| |||||||||||  |  ||||| |||||||||||||||||||    
T  1321109 ccaccaaaatacacatcaccacctaaaacagacccctttcacgaaagcaaccactgtaaaaacgatatctaataccactcatcgtcactactcacccc 1321012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 42533018 - 42533129
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    |||||||||||| |||| | || ||| ||||||||||| || |||||||| || | |||| || ||||| || || ||  ||||||||||||||||||||    
T  42533018 gacaacacccacaaaaaaatacgtcatcacctaaaacatacctattcacgaaagcaaccattgtaaaaatgaaatccaataccacccatcgtcactactc 42533117  T
Q  177 accccgaaagaa 188  Q
     |||| ||||||    
T  42533118 gcccccaaagaa 42533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 16952081 - 16952380
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    |||||||||||||||  ||||||||||| |||||||||   ||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||||||    
T  16952081 acatcataaaagacactcctacacacaacacctagtcattgcctaccttcaacacccatgacgacaacacccac-aaaataaacatcaccacttaaaaca 16952179  T
Q  116 gacttattcacgtaaacgacc-actg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgat 213  Q
    |||   |||||| |||| | | |||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||| ||| |||||||||||| || |  |    
T  16952180 gacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagt 16952279  T
Q  214 cctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaacacaaaa 313  Q
    ||||| |||||||||||| ||||||||||||| ||| ||| ||||| ||| ||  |||  |||| |||||||||||||||| |||||||||||||| |||    
T  16952280 cctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaa 16952379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 17022746 - 17023045
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    |||||||||||||||  ||||||||||| |||||||||   ||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||||||    
T  17022746 acatcataaaagacactcctacacacaacacctagtcattgcctaccttcaacacccatgacgacaacacccac-aaaataaacatcaccacttaaaaca 17022844  T
Q  116 gacttattcacgtaaacgacc-actg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgat 213  Q
    |||   |||||| |||| | | |||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||| ||| |||||||||||| || |  |    
T  17022845 gacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagt 17022944  T
Q  214 cctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaacacaaaa 313  Q
    ||||| |||||||||||| ||||||||||||| ||| ||| ||||| ||| ||  |||  |||| |||||||||||||||| |||||||||||||| |||    
T  17022945 cctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaa 17023044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 314
Target Start/End: Original strand, 17060098 - 17060351
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgacc-actg-aaaaacgatatacataacc 159  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||   |||||| |||| | | |||| ||||| ||||| ||| |||    
T  17060098 cttcaacacccatgacgacaacacccac-aaaataaacatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcacc 17060196  T
Q  160 acccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaa 259  Q
    || ||||||||||||||||||| |||||| ||| |||||||||||| || |  |||||| |||||||||||| ||||||||||||| ||| ||| |||||    
T  17060197 actcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaa 17060296  T
Q  260 tatcattccgctatcaccccctctcaacctccgatacaccgaaagaacacaaaaa 314  Q
     ||| ||  |||  |||| |||||||||||||||| |||||||||||||| ||||    
T  17060297 gatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaa 17060351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 78 - 332
Target Start/End: Original strand, 10173339 - 10173593
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||| ||||| ||||||| |  ||||  |||||||||||| | |||| | ||||||| |||| ||||||||||||||  ||||| ||||||||||||||    
T  10173339 gacaatacccatcaaaatacatgtcacggcctaaaacagacgtcttcatgaaaacgactactgtaaaaacgatatacaacaccactcatcgtcactactc 10173438  T
Q  177 accccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcac 276  Q
    ||||| |||||| ||  ||| |||| ||| ||||  |||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||||||  ||  |||    
T  10173439 acccc-aaagaatactcctcaaaattaaactctcagtcctcaacaccaaagctgagccacatccgaaaagctcatattcaaaagatcattcaacttccac 10173537  T
Q  277 cccctctcaacctccgatacaccgaaagaacacaaaaataaccccaacaccaaact 332  Q
    | |||||| ||||||||| |||||||||||||| || | || ||||| ||||||||    
T  10173538 cacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaact 10173593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 20572346 - 20572226
Alignment:
Q  124 cacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcacc 223  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||| | |||||| ||| |||||||||||| ||||  ||||||||||     
T  20572346 cacgaaaacgaccactgaaaaacgatatccataaccacc-atcgccactactcacctcaaaagaacacccctctaaatgaaactctcattcctcatcact 20572248  T
Q  224 aaagttgaaccacatccgaaaa 245  Q
    |||| | ||||| |||||||||    
T  20572247 aaagctaaaccatatccgaaaa 20572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 25504639 - 25504754
Alignment:
Q  33 ccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaa-cacccaccaaaataaacatcaccacctaaaacagacttattcacgtaa 130  Q
    |||||||||||| ||||||||| |||| || |||||||| | | | ||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||    
T  25504639 ccctacacacaacacctagtcaaaccccaccttcaacacccctgatgacaaacacccaccaaaataaacatcaccacctaaaacagagtctttcacg-aa 25504737  T
Q  131 acgaccactgaaaaacg 147  Q
    |||||||||||||||||    
T  25504738 acgaccactgaaaaacg 25504754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 13699066 - 13699144
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 160  Q
    ||||||||||||||||||||||||||||||||||| |||  || ||| ||||||||||||||||||| ||||||||||||    
T  13699066 aacacccaccaaaataaacatcaccacctaaaacacactcttttacg-aaacgaccactgaaaaacggtatacataacca 13699144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 27879913 - 27880011
Alignment:
Q  80 caacacccaccaaaa-taaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||| | |||||||| ||||||||||| || ||||||||| ||||  |||||||||    
T  27879913 caacacccaccaaaaataaacatcaccacctaaaacagactccttcaggaaaacgacctctgaaaaacgaaatccataaccactcatcaccactactca 27880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 24308447 - 24308550
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctactt-caacacacata-----acgacaacacccaccaaaataaacatcaccaccta 110  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||| |||      |||||||||||||||||||||||||||| ||||||    
T  24308447 acatcataaaagaca-ccctacacagaatacctagtcaaaccctactttcaacactcatctgatgacgacaacacccaccaaaataaacatcatcaccta 24308545  T
Q  111 aaaca 115  Q
    |||||    
T  24308546 aaaca 24308550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 12343139 - 12343037
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||| ||| ||||||| || |||||||||||||||||||  |||||| |||||||| ||| ||||||||||| |  |||||| ||||||||||||||    
T  12343139 gacaacatccatcaaaatacacgtcaccacctaaaacagactccttcacgaaaacgacctctgtaaaaacgatatcc--aaccactcatcgtcactactc 12343042  T
Q  177 acccc 181  Q
    |||||    
T  12343041 acccc 12343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 4975063 - 4974992
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatat 151  Q
    ||||||||||||| || ||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4975063 aacacccaccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatat 4974992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 4992971 - 4992900
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatat 151  Q
    ||||||||||||| || ||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4992971 aacacccaccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatat 4992900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 7696283 - 7696184
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| |||||||||||||||| | |||  |||||| ||||||||| || ||||| ||||| |  |||||| ||||||||||||||    
T  7696283 gacaacacccaccaaaatacacatcaccacctaaaataaactccttcacgaaaacgaccaatgtaaaaatgatattc--aaccactcatcgtcactactc 7696186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 34230378 - 34230292
Alignment:
Q  220 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaa 306  Q
    |||||||||||| ||||||| ||||| ||| |||| |||| ||||||| |||  |||| |||||||||||||||| |||||||||||    
T  34230378 caccaaagttgagccacatctgaaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaa 34230292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 27740293 - 27740153
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccac 161  Q
    ||||||||| ||| | |||||| |||| ||||||||||  |||||||||| ||| |||  |||||| |||| ||||||||| |||||||| |||||||||    
T  27740293 cttcaacacccatgaggacaacgcccatcaaaataaac--caccacctaatacaaactccttcacg-aaactaccactgaagaacgatattcataaccac 27740197  T
Q  162 ccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 205  Q
     | ||| ||||||||| |||  || || ||| ||||||||||||    
T  27740196 tcgtcgccactactcatcccagaataacacccctctaaatgaaa 27740153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 15126186 - 15126283
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacct-aaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactact 175  Q
    ||||| |||||||||||||||||||||||||| |||||| |||  |||||| |||| ||| || |||||| | || ||||||||||||||| |||||||    
T  15126186 gacaatacccaccaaaataaacatcaccacctaaaaacaaactcgttcacg-aaaccacccctaaaaaacaaaatccataaccacccatcgccactact 15126283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 22884913 - 22884991
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacc 159  Q
    |||||||||||| ||||  |||||||||||||||||||||||  |||||| ||||||||||||| |||||| || |||||||    
T  22884913 gacaacacccactaaaa--aacatcaccacctaaaacagactccttcacg-aaacgaccactgacaaacgaaatccataacc 22884991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 2063218 - 2063078
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacaccctacttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagactt 120  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |             |||||||||| |||||||||||||||||||||||||   |||     
T  2063218 cataaaagacatccctacacacaacacctagtcaaaccctacct-------------gacaacacccgccaaaataaacatcaccacctaaaa---actc 2063135  T
Q  121 attcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactca 177  Q
     |||| | |||||||||||| ||||||||||| ||||||||  ||| | |||||||||    
T  2063134 cttcaag-aaacgaccactgaaaaaacgatatccataaccatacattgccactactca 2063078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 15361020 - 15360985
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  15361020 gacaacacccaccaaaataaacatcaccacctaaaa 15360985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 33788393 - 33788535
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccac 161  Q
    ||||||||| ||| |  ||||||||||| |||||||||||  ||||||||||||| ||  | |||| |||| |||||||| |||| | || |||||||||    
T  33788393 cttcaacacccatgagtacaacacccactaaaataaacattgccacctaaaacaggctcctccacg-aaacaaccactgacaaacaaaatccataaccac 33788491  T
Q  162 ccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 205  Q
    |  ||| ||||||||  ||| ||| || ||| ||||||||||||    
T  33788492 ctgtcgccactactcgtcccaaaataacacccctctaaatgaaa 33788535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 43816249 - 43816359
Alignment:
Q  93 aataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagacc 192  Q
    ||||||||||||||||||||| |||||  |||||| |||| |||||||||||||| ||| ||||  ||  ||||| ||||||||  ||||||| || ||     
T  43816249 aataaacatcaccacctaaaatagactctttcacg-aaacaaccactgaaaaacggtatccatacaca-gcatcgccactactcctcccgaaaaaacact 43816346  T
Q  193 gctctaaatgaaa 205  Q
     ||||||||||||    
T  43816347 cctctaaatgaaa 43816359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 1269797 - 1269698
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccact-gaaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    ||||||||  |||||| |||||||||||||||||| | |  ||| || |||||||| ||  ||||||||||| |  ||||||||||||||||||||| ||    
T  1269797 aacacccataaaaatacacatcaccacctaaaacaaattccttctcggaaacgacctctataaaaacgatatcc--aaccacccatcgtcactactcgcc 1269700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 20572413 - 20572339
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacacccta-cttcaacacacataacgacaacacccaccaaaa 94  Q
    ||||||||||| |||||||||||| || || ||| |||||| ||||||||| ||| | |||||||||||| ||||    
T  20572413 cataaaagacacccctacacacaacacttactcataccctaccttcaacacccatgaggacaacacccacgaaaa 20572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 37770413 - 37770469
Alignment:
Q  83 cacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccact 139  Q
    |||||||||||||  || |||||||||||||||||||  |||||| |||| ||||||    
T  37770413 cacccaccaaaatccacgtcaccacctaaaacagactccttcacgaaaaccaccact 37770469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 41086572 - 41086648
Alignment:
Q  101 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||   || ||| || ||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  41086572 tcaccacctaaaacagaccccttaacgaaagcgaccactctaaaaacgatatccaataccacccatcgtcactactc 41086648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 41113502 - 41113554
Alignment:
Q  83 cacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgac 135  Q
    ||||||||||||||||| | || ||||||||||||||  |||||| |||||||    
T  41113502 cacccaccaaaataaacgttactacctaaaacagactccttcacgaaaacgac 41113554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 323
Target Start/End: Original strand, 17853773 - 17854073
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    ||||||| |||||| ||| ||||| |||||| || ||||||| |||| ||| ||| | || |||||||||||||||||||||||||  ||||||||||||    
T  17853773 cataaaaaacatccatactcacaacacctagccaaaccctaccttcaccacccatgaggaaaacacccaccaaaataaacatcaccttctaaaacagact 17853872  T
Q  120 tattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcat 219  Q
      || ||| |||||| |||||||||||||||| ||||||||||||||  ||||||||||||| |||| ||||  ||||||||||||  | | ||||||||    
T  17853873 cctttacg-aaacgatcactgaaaaacgatatccataaccacccatcaccactactcaccccaaaagtagacacctctaaatgaaacac-caatcctcat 17853970  T
Q  220 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaacacaaaaataacc 319  Q
    ||||| || ||| |||||||||||||  |||||||| ||| |||||||  ||  |||| ||||||||| || | | |||||||||||||  ||||||| |    
T  17853971 caccatagctgagccacatccgaaaa-gtcatattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaacattaaaataagc 17854069  T
Q  320 ccaa 323  Q
    ||||    
T  17854070 ccaa 17854073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 8731268 - 8731153
Alignment:
Q  33 ccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaa-cacccaccaaaataaacatcaccacctaaaacagacttattcacgtaa 130  Q
    |||||||||||| ||||||||| |||| || |||||||| | | | ||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||    
T  8731268 ccctacacacaacacctagtcaaaccccaccttcaacacccctgatgacaaacacccaccaaaataaacatcaccacctaaaacagagtctttcacg-aa 8731170  T
Q  131 acgaccactgaaaaacg 147  Q
    |||||||||||||||||    
T  8731169 acgaccactgaaaaacg 8731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 253
Target Start/End: Original strand, 26045723 - 26045901
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||  || |||||||||||||||||||| |||| | ||| |||||| | |||||||| || ||  ||| ||||||||||||||||    
T  26045723 gacaacacccaccaaaattcacgtcaccacctaaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacctcccatcgtcactactc 26045822  T
Q  177 accccga--aagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatat 253  Q
    ||||| |  || || ||| ||| |||| ||| |||| ||||| | ||||||||||||  ||| |||||||| |||||||    
T  26045823 accccaaagaaaaacacccctcaaaattaaactctcaatcctaaacaccaaagttgagtcacctccgaaaagctcatat 26045901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 39183963 - 39184044
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 160  Q
    |||||||||||| |||||||| ||||||||||||||||||||   ||||| ||||||||||||||||||| ||| ||||||||    
T  39183963 gacaacacccactaaaataaagatcaccacctaaaacagactctatcacg-aaacgaccactgaaaaacggtatccataacca 39184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 24072047 - 24072142
Alignment:
Q  80 caacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
    |||||||||||||||||||||||||||| |||||||| | |  ||||| ||||||||||| |||||||||||  || | |||||||||||||||||||    
T  24072047 caacacccaccaaaataaacatcaccacataaaacagtc-tcctcacg-aaacgaccactaaaaaacgatatctatgatcacccatcgtcactactca 24072142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 14302203 - 14302314
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| || ||||||||||||||||| |  ||| || ||||||||| || ||||||||||| ||  ||||||  ||||||||||||    
T  14302203 gacaacacccaccaaaatacacgtcaccacctaaaacagattccttcgcgaaaacgaccaatgtaaaaacgatatccaacaccacctgtcgtcactactc 14302302  T
Q  177 accccgaaagaa 188  Q
    | ||| ||||||    
T  14302303 atccccaaagaa 14302314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 33109957 - 33110050
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtca 170  Q
    ||||||||||||||||||| || ||| ||||||||||| ||   |||||| |||||||||||| ||||||||||| ||  ||||||||||||||    
T  33109957 gacaacacccaccaaaatacacgtcatcacctaaaacaaaccccttcacgaaaacgaccactgtaaaaacgatatccaataccacccatcgtca 33110050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 7682874 - 7682815
Alignment:
Q  79 acaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccac 138  Q
    |||||||||||||||||| |||||||||||||||| |||||  |||||  ||||||||||    
T  7682874 acaacacccaccaaaatacacatcaccacctaaaatagactctttcacaaaaacgaccac 7682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 30097654 - 30097600
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaac 132  Q
    ||||||||||||||||||| || |||||||||||||||||||  |||||| ||||    
T  30097654 gacaacacccaccaaaatacacgtcaccacctaaaacagactccttcacgaaaac 30097600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 7195060 - 7195101
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  7195060 gacaacacccaccaaaatacacgtcaccacctaaaacagact 7195101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 33258665 - 33258750
Alignment:
Q  104 ccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 188  Q
    ||||||||||||||  | |||||| || ||||||||| ||||||||||| ||  |||| |||||| ||||||||||||| ||||||    
T  33258665 ccacctaaaacagatctcttcacgaaagcgaccactgtaaaaacgatatccaataccatccatcgccactactcacccctaaagaa 33258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 178
Target Start/End: Complemental strand, 8297790 - 8297694
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcac 178  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||| | ||| ||||| || ||||||||| | |  ||||||| |||||||||||||||    
T  8297790 aacatccaccaaaatacacatcaccacctaaaacacactccttcaagaaaaagaccaatgtaaaaacgatttcc--aaccacctatcgtcactactcac 8297694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 113
Target Start/End: Original strand, 22675101 - 22675132
Alignment:
Q  82 acacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||||||||||    
T  22675101 acacccaccaaaataaacatcaccacctaaaa 22675132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 26405307 - 26405354
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattca 125  Q
    ||||||| ||||||||||| || |||||||||||||||||||| ||||    
T  26405307 gacaacaaccaccaaaatacacgtcaccacctaaaacagacttcttca 26405354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 39024259 - 39024306
Alignment:
Q  132 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccc 180  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||    
T  39024259 cgaccattgaaaaacgatatccataa-cactcatcgtcactactcaccc 39024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 314
Target Start/End: Complemental strand, 16577579 - 16577344
Alignment:
Q  80 caacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaac-gatatacataaccacccatcgtcactactcac 178  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||||| |||||  ||||| ||||||||  ||||||| ||||||||    
T  16577579 caacacccaccaaaataaacatcatcacctaaaacagactctttcacgaaaacgaccactcaaaaaatgatatccataaccattcatcgtccctactcac 16577480  T
Q  179 cccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccc 278  Q
     || |||||| ||| ||||||| |||| | ||  ||  ||||||||||||||| ||||||||||||| ||| ||||| ||| ||||||| |||  ||||     
T  16577479 tccaaaagaacacccctctaaaagaaactttcagtcaccatcaccaaagttgagccacatccgaaaagctcctattccaaagatcattcagcttccacca 16577380  T
Q  279 cctctcaacctccgatacaccgaaagaacacaaaaa 314  Q
    ||||||||||||| ||  ||||||||||| ||||||    
T  16577379 cctctcaacctccaatctaccgaaagaacgcaaaaa 16577344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 38548824 - 38548934
Alignment:
Q  66 aacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccat 165  Q
    ||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||| |||||||||||||    
T  38548824 aacactcataagggcaacatccaccaaaataaacatcaccacctaaaacagactctttcacg-aaacgatcactgaaaaacgatattcataaccacccat 38548922  T
Q  166 cgtcactactca 177  Q
    ||||||||||||    
T  38548923 cgtcactactca 38548934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 38544457 - 38544613
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    |||||||||||||||||||||||| |||||| || | | ||| |||||||| ||| | |||||||  |||||||||||||||||||||||||||||||||    
T  38544457 cataaaagacatccctacacacaacacctagccaaatcgtaccttcaacacccatgaggacaacatacaccaaaataaacatcaccacctaaaacagact 38544556  T
Q  120 tattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
      ||||||  || || ||||| |||||||||| ||||||||| |||||||||||||||    
T  38544557 ctttcacg-gaatgatcactggaaaacgatatccataaccactcatcgtcactactca 38544613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 41126188 - 41126462
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    |||| |||||||||| |||||||||||| || ||| || ||||||| |||||||| ||  | ||||||||| || |||||| | ||||||||||||||||    
T  41126188 acattataaaagacacccctacacacaacacatagccataccctaccttcaacacccaagaggacaacacctac-aaaatacatatcaccacctaaaaca 41126286  T
Q  116 gacttattcacgtaaacga-ccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatc 214  Q
    |||  ||||||| |||| | |||||| |||||||||| ||| ||||||||||||||||||||||||             |||||||||||| ||||  ||    
T  41126287 gacgcattcacgaaaacaaaccactgtaaaacgatatccatcaccacccatcgtcactactcaccc-------------ctctaaatgaaactctcagtc 41126373  T
Q  215 ctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaa 303  Q
    ||||||||||||||||| ||||||| ||||| ||| ||| | ||| ||| ||| |||  || | ||||||||||||| || ||||||||    
T  41126374 ctcatcaccaaagttgatccacatctgaaaagctcctatccaaaagatcgttcagcttccagcacctctcaacctccaatccaccgaaa 41126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 16149083 - 16148987
Alignment:
Q  91 aaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaaga 187  Q
    |||||| || ||||||||||||||||||   |||| ||||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||||    
T  16149083 aaaatacacgtcaccacctaaaacagacaccttcatgtaaacgactactgaaaaacgatatccaaaagcacccatcgtcactactcacccccaaaga 16148987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 32882688 - 32882584
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| |||||||| |||||||| ||||  |||||| |||||| ||||| ||| ||||||| ||  ||||||||||||||||||||    
T  32882688 gacaacacccaccaaaatatacatcaccgcctaaaactgactccttcacgaaaacgagcactgtaaacacgatatccaacaccacccatcgtcactactc 32882589  T
Q  177 acccc 181  Q
    |||||    
T  32882588 acccc 32882584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 160
Target Start/End: Complemental strand, 17033937 - 17033810
Alignment:
Q  33 ccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaa 131  Q
    |||||||||||| | ||||||| ||||||| |||||||| | |   ||||||| |||| ||||||||||| ||||||||||||| |||  |||||| |||    
T  17033937 ccctacacacaacaactagtcaaaccctaccttcaacacccctggggacaacatccacgaaaataaacattaccacctaaaacatactctttcacg-aaa 17033839  T
Q  132 cgaccactgaaaaacgatatacataacca 160  Q
    |||||||| ||||||| ||||||||||||    
T  17033838 cgaccacttaaaaacggtatacataacca 17033810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 34775193 - 34775089
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| || ||| |||||||||||||||  |||||| ||||||| |||| |||||||| || |   || |||| ||||||||||||    
T  34775193 gacaacacccaccaaaatacacgtcatcacctaaaacagactccttcacgaaaacgacaactgtaaaaacgaaatcccacactacccgtcgtcactactc 34775094  T
Q  177 acccc 181  Q
    |||||    
T  34775093 acccc 34775089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 46603683 - 46603606
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataa 157  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||| || ||| ||| |||||    
T  46603683 gacaacacccaccaaaataaa-atcaccatctaaaacagacttcttcacg-aaacgaccactggaacacgttatccataa 46603606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 42374467 - 42374386
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 160  Q
    |||||| |||||||| |||||||||||||||||||||| | |  |||||| ||||||||||||||||||  ||| ||||||||    
T  42374467 gacaacccccaccaagataaacatcaccacctaaaacaaattccttcacg-aaacgaccactgaaaaactgtatccataacca 42374386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 49820427 - 49820311
Alignment:
Q  87 caccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaag 186  Q
    ||||||||||||||||||||||||||| |||||  || | | |||||| |||||||||||||||| ||||||||||| ||| ||| || || ||| |||     
T  49820427 caccaaaataaacatcaccacctaaaaaagactcctt-atg-aaacgagcactgaaaaacgatatccataaccacccgtcgccaccacacatcccaaaat 49820330  T
Q  187 aagaccgctctaaatgaaa 205  Q
    |  ||| ||||||||||||    
T  49820329 atcacccctctaaatgaaa 49820311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 17993861 - 17993909
Alignment:
Q  57 ccctacttcaacacacataacgacaacacccaccaaaataaacatcacc 105  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  17993861 ccctacgtcaacacccataaggacaacacccaccaaaataaacatcacc 17993909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 37200438 - 37200386
Alignment:
Q  63 ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    |||||||| ||| | |||||||||||| |||||||||||||||||||||||||    
T  37200438 ttcaacactcatgaggacaacacccactaaaataaacatcaccacctaaaaca 37200386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 46768497 - 46768437
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccac 138  Q
    ||||||||||||||||||  || |||||||||||||||||||  |||||| ||||||||||    
T  46768497 gacaacacccaccaaaattcacgtcaccacctaaaacagactccttcacgaaaacgaccac 46768437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 26602553 - 26602656
Alignment:
Q  24 aaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttat 122  Q
    |||| ||| |||||||||||| |||||| || ||||||| |||||||  |   | |||||||||||  ||||||||||||||||||||| ||||||| ||    
T  26602553 aaaatacacccctacacacaacacctagccaaaccctaccttcaacaaccccgaggacaacacccatgaaaataaacatcaccacctaacacagactcat 26602652  T
Q  123 tcac 126  Q
    ||||    
T  26602653 tcac 26602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 16147735 - 16147649
Alignment:
Q  220 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaa 306  Q
    |||||||| ||| ||||||||||||| |||||||  |||| |||||||  || ||||| |||||| |||||||||  ||||||||||    
T  16147735 caccaaagctgagccacatccgaaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaa 16147649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 10785221 - 10785330
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||| ||||||| |  | | ||| |||||||||||  |||||| |||||||  |||||||| |||||| ||  ||||||||||||||||||||    
T  10785221 gacaacacccatcaaaatacatgttatcacttaaaacagactccttcacgaaaacgacatctgaaaaaacgatatcca--accacccatcgtcactactc 10785318  T
Q  177 accccgaaagaa 188  Q
    | |||| |||||    
T  10785319 atcccgcaagaa 10785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 16577628 - 16577581
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctactt 64  Q
    ||||||||||||||| |||||||||||| | ||||||| |||||||||    
T  16577628 acatcataaaagacacccctacacacaacatctagtcataccctactt 16577581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 205
Target Start/End: Complemental strand, 40934169 - 40934044
Alignment:
Q  77 cgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacat-aaccacccatcgtcactact 175  Q
    ||||||||| |||||||||||||||   ||||||||| |||||  |||||| ||| || || ||||||||||||| ||| |||||| ||||  |||||||    
T  40934169 cgacaacacacaccaaaataaacat---cacctaaaagagactccttcacg-aaatgatcattgaaaaacgatatccataaaccacacatcaccactact 40934074  T
Q  176 caccccgaaagaagaccgctctaaatgaaa 205  Q
     ||| | |||||| |||  |||||||||||    
T  40934073 tacctcaaaagaacacccgtctaaatgaaa 40934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 6583014 - 6583052
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    |||||||||||||||| || |||||||||||||||||||    
T  6583014 aacacccaccaaaatacacgtcaccacctaaaacagact 6583052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 181
Target Start/End: Complemental strand, 24659174 - 24659146
Alignment:
Q  153 cataaccacccatcgtcactactcacccc 181  Q
    |||||||||||||||||||||||||||||    
T  24659174 cataaccacccatcgtcactactcacccc 24659146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 31290799 - 31290880
Alignment:
Q  98 acatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccc 180  Q
    ||||||||||||||| ||||||  ||| || |||||||||||| ||||| ||||  |  ||||| |||||||||||||||||||    
T  31290799 acatcaccacctaaatcagactccttcgcgaaaacgaccactgtaaaaatgatagcc--aaccatccatcgtcactactcaccc 31290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 78 - 314
Target Start/End: Original strand, 32935102 - 32935337
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
    ||||||||||||||||||||||| |||||||||||| |||||  || ||| ||||| || || |||||||||||||||||||||||||| |||||||| |    
T  32935102 gacaacacccaccaaaataaacaccaccacctaaaatagactccttaacgaaaacgccccctcaaaaacgatatacataaccacccatcatcactactga 32935201  T
Q  178 ccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcacc 277  Q
    |||| ||| || | | |||||||||||| || |  | ||||||||||||| |||   ||||||||||| ||||| ||||||| ||||| | |||  ||||    
T  32935202 cccc-aaaaaacatccctctaaatgaaactcacagtgctcatcaccaaagctgagttacatccgaaaaactcatgttcgaaagatcatgcagcttccacc 32935300  T
Q  278 ccctctcaacctccgatacaccgaaagaacacaaaaa 314  Q
     |||| ||||||  ||  |||||||||||||| ||||    
T  32935301 acctcccaacctttgaaccaccgaaagaacactaaaa 32935337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 33968340 - 33968518
Alignment:
Q  23 taaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagactta 121  Q
    ||||||||| |||||||||||  |||||| || ||||||| |||||||| | | | ||||||||||||||||||| ||||   |||||||||||||||      
T  33968340 taaaagacacccctacacacatcacctagccaaaccctaccttcaacacccttgaggacaacacccaccaaaatagacat---cacctaaaacagactct 33968436  T
Q  122 ttcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 205  Q
    || ||  ||||||||||||||||| | ||| ||||||||  |||| |||||||||| ||| ||| || ||| ||||||||||||    
T  33968437 tttac-aaaacgaccactgaaaaatggtatccataacca-gcatcatcactactcatcccaaaataacacccctctaaatgaaa 33968518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 17278199 - 17278326
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    ||||||||||||||| |  |  |||||| | |||| || ||||||| |||||||| |||   |||||||||||||||||||||||| |||||||||| ||    
T  17278199 acatcataaaagacaccattgaacacaagatctagccaaaccctaccttcaacacccatgcggacaacacccaccaaaataaacattaccacctaaatca 17278298  T
Q  116 gacttattcacgtaaacgaccactgaaaa 144  Q
    ||||  |||||| |||||| |||||||||    
T  17278299 gactccttcacg-aaacgaacactgaaaa 17278326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 15120362 - 15120410
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcac 126  Q
    ||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  15120362 gacaacatccaccaaaatacacatcaccacctaaaacagactcattcac 15120410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 16180675 - 16180715
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagac 118  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  16180675 gacaacatccaccaaaataaacatcaccacctaaaacagac 16180715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 13098347 - 13098382
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  13098347 gacaacacccaccaaaataaacatcaccacctaaaa 13098382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 20701583 - 20701664
Alignment:
Q  101 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 181  Q
    |||||||||| |||||||  ||||||| || | ||||||| ||||||||||| ||  || ||||||||||||||||||||||    
T  20701583 tcaccacctataacagacccattcacgaaagcaaccactgtaaaaacgatatccaatactacccatcgtcactactcacccc 20701664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 20701710 - 20701793
Alignment:
Q  223 caaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccccctctcaacctccgatacaccgaaagaa 306  Q
    ||||||||| |||||| |||||| ||| ||| ||||| ||||||| |||  |||  |||||| ||||||||| |||||||||||    
T  20701710 caaagttgagccacattcgaaaagctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaa 20701793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 21266369 - 21266263
Alignment:
Q  132 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttga 231  Q
    ||||||||||||||||| || || ||| ||| |||||||||||||||||| || ||| |||| | |||| ||||  ||| ||||||| |||||||  |||    
T  21266369 cgaccactgaaaaacgacatccagaacaacc-atcgtcactactcaccccaaaggaacaccgttgtaaaagaaa-actcaatcctcaacaccaaaactga 21266272  T
Q  232 accacatcc 240  Q
     ||||||||    
T  21266271 gccacatcc 21266263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 12296480 - 12296322
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa-cagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactc 176  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||  || || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  12296480 gacaacacccaccaaaataaacatcaccacctaaaaacagactcctttccg-aagcgaccactgaaaaacgatatccataaccacccatcgccactactc 12296382  T
Q  177 accccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccac 236  Q
    | ||| ||| || ||| ||||||||||||  |||  ||||||||||| ||||||| ||||    
T  12296381 atcccaaaataacacccctctaaatgaaacactccgtcctcatcacctaagttgagccac 12296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 266
Target Start/End: Complemental strand, 19673420 - 19673231
Alignment:
Q  81 aacacccaccaaaataaacatcacca---cctaaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactc 176  Q
    |||||||||||||| | || ||||||   ||| |||||||| | |||||| ||| |||||||| |||| | |||| ||  |||| || ||||||||||||    
T  19673420 aacacccaccaaaaaacacgtcaccagtacctcaaacagacgtcttcacgaaaatgaccactgtaaaagcaatatccaacaccatccgtcgtcactactc 19673321  T
Q  177 accccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcatt 266  Q
    ||||| |||||| ||  ||| |||| ||| ||||  |||||| |||||||||| | |||||||||||||  |||||| | ||||||||||    
T  19673320 acccccaaagaacactcctcaaaattaaactctcagtcctcaacaccaaagtttagccacatccgaaaagttcatatccaaaatatcatt 19673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 22810925 - 22811029
Alignment:
Q  83 cacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 181  Q
    |||||||||||||| || ||||| |||||||||||||  |||||| || ||||||||| ||||||||||| |   |||| ||||||||||||||||||||    
T  22810925 cacccaccaaaatacacgtcacctcctaaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcc--taccatccatcgtcactactcacccc 22811022  T
Q  182 gaaagaa 188  Q
     ||||||    
T  22811023 caaagaa 22811029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 43373852 - 43373907
Alignment:
Q  64 tcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  43373852 tcaacacacataaggacaacacccaccaaaataaacatcaccccctaaaactgact 43373907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 46487575 - 46487477
Alignment:
Q  79 acaacacccaccaaaataaacatcaccacctaaaa-cagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
    |||| |||||||||||||||||||||| ||||||| ||||||  |||| | || |||||||||||||||||||| |||||||||  |||| |||||||||    
T  46487575 acaatacccaccaaaataaacatcacctcctaaaaacagactccttcatg-aagcgaccactgaaaaacgatattcataaccacatatcgccactactca 46487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 41117727 - 41117829
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| | ||||||||||| |||||||| || |||| |||| |||  || ||||||||||| |  ||||||||||||||| |||||    
T  41117727 gacaacacccaccaaaatacatatcaccacctagaacagactcatgcacgaaaacaaccgttgtaaaaacgatatcc--aaccacccatcgtcattactc 41117824  T
Q  177 acccc 181  Q
    |||||    
T  41117825 acccc 41117829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 49747849 - 49747739
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||  |  |||||||||||||||||||  |||||| ||||||||| || |||||||| || ||  ||| ||||| ||||||||||    
T  49747849 gacaacacccaccaaaattcatgtcaccacctaaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacaccgcccattgtcactactc 49747751  T
Q  177 accccgaaagaa 188  Q
    ||||| ||||||    
T  49747750 acccctaaagaa 49747739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 309
Target Start/End: Original strand, 19814978 - 19815213
Alignment:
Q  78 gacaacacccaccaaaataaacatcacca---cctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcacta 173  Q
    ||||||||||||||||| | || ||||||   ||| |||||||| | |||||| ||| |||||| | ||||| ||||| ||  |||| || | |||||||    
T  19814978 gacaacacccaccaaaaaacacgtcaccagtacctcaaacagacgtcttcacgaaaatgaccacggtaaaaatgatatccaataccatccgttgtcacta 19815077  T
Q  174 ctcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctat 273  Q
    |||||||| |||||| ||  ||| | || ||| ||||  |||||| |||||||||| | ||||||| |||||  || ||| ||||| ||||||  |||      
T  19815078 ctcacccccaaagaacacttctcaagattaaactctcagtcctcaacaccaaagtttagccacatcggaaaagttcctatccgaaagatcatttagcttc 19815177  T
Q  274 caccccctctcaacctccgatacaccgaaagaacac 309  Q
    ||||  ||||| ||||||| | ||||||||||||||    
T  19815178 caccatctctcgacctccggtccaccgaaagaacac 19815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 38636993 - 38637095
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    |||||||||||| |||||| |  ||||||||||||||| |||  |||||| |||| ||| ||| ||||| ||||| ||  ||||||||||||||||||||    
T  38636993 gacaacacccacgaaaatacatgtcaccacctaaaacaaactccttcacgaaaacaaccgctgtaaaaatgatatcca--accacccatcgtcactactc 38637090  T
Q  177 acccc 181  Q
    |||||    
T  38637091 acccc 38637095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 48098651 - 48098546
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    ||||||||||||| || || |||||||||||||||  |||  ||||  |||||||||||| ||||||||||| ||| || |||| |||||||||||||||    
T  48098651 aacacccaccaaa-tacacgtcaccacctaaaacactctt--tcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcgtcactactcacc 48098555  T
Q  180 ccgaaagaa 188  Q
    || ||||||    
T  48098554 cccaaagaa 48098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 20632261 - 20632339
Alignment:
Q  94 ataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcacta 173  Q
    |||||||||||| |||||||||||||  |||||  |||| ||||||||| ||||||| |||||||||||| ||| |||||    
T  20632261 ataaacatcaccccctaaaacagactctttcaca-aaacaaccactgaagaacgatacacataaccacccgtcgccacta 20632339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 28967171 - 28967136
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28967171 gacaacacccaccaaaataaacatcgccacctaaaa 28967136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 19311128 - 19311236
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    |||||||||||||||| || ||||||||  ||||||| |  |||||| |||||| ||||| ||||||||||| ||  | |  ||| ||||||| ||||||    
T  19311128 aacacccaccaaaatacacgtcaccaccataaacagattccttcacgaaaacgagcactgtaaaaacgatatccaacatcctccaccgtcactgctcacc 19311227  T
Q  180 ccgaaagaa 188  Q
    || ||||||    
T  19311228 cccaaagaa 19311236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 736 - 892
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    |||||||||||||||||||||||| |||||| || | | ||| |||||||| ||| | |||||||  |||||||||||||||||||||||||||||||||    
T  736 cataaaagacatccctacacacaacacctagccaaatcgtaccttcaacacccatgaggacaacatacaccaaaataaacatcaccacctaaaacagact 835  T
Q  120 tattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 177  Q
      ||||||  || || ||||| |||||||||| ||||||||| |||||||||||||||    
T  836 ctttcacg-gaatgatcactggaaaacgatatccataaccactcatcgtcactactca 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 25184861 - 25184953
Alignment:
Q  21 cataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaa 112  Q
    |||||||||||||| |||||||||||||||| ||  |||||| |||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  25184861 cataaaagacatccatacacacaatacctagccaagccctaccttcaacactcatgaggacaacacccaccaaaataaacatcaccacctaaa 25184953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 10248326 - 10248430
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    |||||||||| |||||||| || ||||||||||||||| |||  |||||| |||||||||||| |||||||| || |   | ||||||||||||||||||    
T  10248326 gacaacacccgccaaaatacacgtcaccacctaaaacaaactccttcacgaaaacgaccactgtaaaaacgacatcccacaacacccatcgtcactactc 10248425  T
Q  177 acccc 181  Q
    |||||    
T  10248426 acccc 10248430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 17720486 - 17720626
Alignment:
Q  80 caacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    |||||||||| |||| ||||||||| |||||||||| |||  |||||  ||| |||| || ||||| |||||||||||||||  ||||||||||||||||    
T  17720486 caacacccactaaaa-aaacatcactacctaaaacaaactccttcaccaaaa-gacctctaaaaaaagatatacataaccacatatcgtcactactcacc 17720583  T
Q  180 ccgaaagaagaccgctctaaatgaaattctcgatcctcatcac 222  Q
    || |||  | ||| ||||||||||||  |||  ||||||||||    
T  17720584 ccaaaaataaacccctctaaatgaaacactccgtcctcatcac 17720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 231
Target Start/End: Complemental strand, 15907037 - 15906839
Alignment:
Q  33 ccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaa 131  Q
    |||||||||||| |||||| |  ||||||| |||||||| ||| | ||| ||||||||  | ||| ||||||||||| ||||||||    |||||| |||    
T  15907037 ccctacacacaacacctagcccaaccctaccttcaacacccatgaggaccacacccacagagatagacatcaccaccaaaaacagatcccttcacg-aaa 15906939  T
Q  132 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttga 231  Q
    |||||||||||||||  ||| |||||||||   | | ||||||||| ||| ||| || ||| |||||||| |||  | |  ||||||||||| |||||||    
T  15906938 cgaccactgaaaaacagtatccataaccacatgttgccactactcatcccaaaataacacctctctaaataaaacacactgtcctcatcacctaagttga 15906839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 17656495 - 17656606
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacg-taaacgaccactg-aaaaacgatatacataaccacccatcgtcactact 175  Q
    ||||||||||||||||||  || |||||| ||||||||||||  |||| |  |||||||||||| ||||||||||| ||  ||| | ||| |||||||||    
T  17656495 gacaacacccaccaaaattcacgtcaccatctaaaacagactccttcaagaaaaacgaccactgcaaaaacgatatccaacaccgctcattgtcactact 17656594  T
Q  176 caccccgaaaga 187  Q
    |||||| |||||    
T  17656595 cacccccaaaga 17656606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 30235877 - 30235932
Alignment:
Q  64 tcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    ||||||| || || |||||||||||||||||||||||||||| |||||||| ||||    
T  30235877 tcaacacccaaaaggacaacacccaccaaaataaacatcaccccctaaaactgact 30235932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 41791017 - 41791069
Alignment:
Q  67 acacacataacgacaacacccaccaaaataaacatcaccacctaaaacagact 119  Q
    |||| ||||| |||||| ||||||||||||||||||||| |||||||| ||||    
T  41791017 acactcataaggacaacccccaccaaaataaacatcaccccctaaaactgact 41791069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 12197842 - 12197945
Alignment:
Q  86 ccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaa-acgatatacataaccacccatcgtcactactcaccccgaa 184  Q
    |||| |||||| || |||||||||| |||||||   |||| | | ||||||||| |||| ||||||| ||  ||||||| ||||||||||||||||| ||    
T  12197842 ccacaaaaatacacgtcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaa 12197941  T
Q  185 agaa 188  Q
    ||||    
T  12197942 agaa 12197945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 12442270 - 12442373
Alignment:
Q  86 ccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaa-acgatatacataaccacccatcgtcactactcaccccgaa 184  Q
    |||| |||||| || |||||||||| |||||||   |||| | | ||||||||| |||| ||||||| ||  ||||||| ||||||||||||||||| ||    
T  12442270 ccacaaaaatacacgtcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaa 12442369  T
Q  185 agaa 188  Q
    ||||    
T  12442370 agaa 12442373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 1760992 - 1760888
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccct-acttcaacacacataacgacaaca-cccaccaaaataaacatcaccacctaaaac 114  Q
    |||||||||||||||| | ||| ||||| ||||| ||| |||||  ||||||||| |||   ||||||| |||| |||||||||  | ||||||||||||    
T  1760992 acatcataaaagacattcatacgcacaacacctaatcaaaccctgccttcaacactcatgcggacaacaccccatcaaaataaatttgaccacctaaaac 1760893  T
Q  115 agact 119  Q
    |||||    
T  1760892 agact 1760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 27399282 - 27399140
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacat-aacca 160  Q
    ||||||||| ||| | |||||||||||||||||||||||||| |||||||||||| ||  ||||||  ||||||||||| ||||||||||  || |||||    
T  27399282 cttcaacacccatgaggacaacacccaccaaaataaacatcatcacctaaaacaggctccttcacg-caacgaccactg-aaaacgatatctataaacca 27399185  T
Q  161 cccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 205  Q
    ||||| | ||||||||| ||| |||||| |||  |||||||||||    
T  27399184 cccattgccactactcagcccaaaagaacacccgtctaaatgaaa 27399140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 823141 - 823297
Alignment:
Q  24 aaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttat 122  Q
    |||||||| || |||||||||  |||| |||  |||||| |||||||| ||| | |||| ||||||||||||| ||| ||||||||||||||| |||       
T  823141 aaaagacacccttacacacaacccctaatcaacccctaccttcaacacccatgaggacatcacccaccaaaattaacttcaccacctaaaacaaactcca 823240  T
Q  123 tcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccc 180  Q
    ||||  |||| |||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  823241 tcaca-aaacaaccactgaaaaacgatatccataaccacccttcgcctctactcaccc 823297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 25594292 - 25594406
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataacca 160  Q
    ||||||||| ||| | |||||||||||||| |||||||||||| |||||||||| |||  |||||  |||||||||||| ||||||||||| || |||||    
T  25594292 cttcaacacccatgaggacaacacccaccacaataaacatcactacctaaaacatactccttcac-aaaacgaccactgaaaaaacgatatcca-aacca 25594389  T
Q  161 cccatcgtcactactca 177  Q
    ||||||| |||||||||    
T  25594390 cccatcgccactactca 25594406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 37123703 - 37123601
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 176  Q
    ||||||||||||||||||| |||||||||  ||||| |||||| |||||| |||||||||||| ||||||||||| ||  ||||||  | ||||||||||    
T  37123703 gacaacacccaccaaaatacacatcaccatataaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccacctgttgtcactactc 37123604  T
Q  177 acc 179  Q
    |||    
T  37123603 acc 37123601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 45354645 - 45354790
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacacccta-cttcaacacacataacgacaacacccaccaaaat-aaacatcaccacctaaaac 114  Q
    ||||||||||||||| |||||||||||  |||||| || |||||| |||||||||  || | |||||||||||| ||||| ||| ||||||||||| ||     
T  45354645 acatcataaaagacacccctacacacagcacctagccaaaccctaccttcaacacctattaggacaacacccacaaaaataaaatatcaccacctagaat 45354744  T
Q  115 agacttattcacgtaaacgaccactgaaaaacgatatacataaccac 161  Q
    | | |  |||||| ||||||||||||||||| ||||| |||||||||    
T  45354745 ataatctttcacg-aaacgaccactgaaaaaggatatccataaccac 45354790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 12086559 - 12086489
Alignment:
Q  82 acacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatat 151  Q
    ||||||||||||||||||||||||||||||||||||  |||||| | |||||| ||||| |||||||||||    
T  12086559 acacccaccaaaataaacatcaccacctaaaacagatgtattcaagaaaacgatcactgtaaaaacgatat 12086489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 1652636 - 1652692
Alignment:
Q  64 tcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagactt 120  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  1652636 tcaacactcataaggacaacacccaccaaaataaacatcaccccctaaaactgactt 1652692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 14194248 - 14194152
Alignment:
Q  82 acacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcacccc 181  Q
    ||||||||||||||| || |||||||||||||||||||   ||||| || || |||||||| |||||||| |  ||||| ||||||||||||||||||||    
T  14194248 acacccaccaaaatacacgtcaccacctaaaacagactccatcacgaaatcg-ccactgaataacgatatcc--aaccatccatcgtcactactcacccc 14194152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 32010072 - 32010016
Alignment:
Q  89 ccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaa 145  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  32010072 ccaaaataaacatcaccacctaaaacagactccttcacgaaaacgacctctgaaaaa 32010016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 13018024 - 13018246
Alignment:
Q  17 acatcataaaagacatccctacacacaatacctagtcacaccctac-ttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    ||||||||||||||| ||||||||| |  ||||| ||| || |||| || ||||   || | |||| || |||||||||| ||| |||||||||||||||    
T  13018024 acatcataaaagacacccctacacataccacctaatcaaactctacctttaacaataatgaggacatcatccaccaaaattaacttcaccacctaaaaca 13018123  T
Q  116 gacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcc 215  Q
    ||||   ||||  |||| |||||| ||||| ||||| ||| | ||||||| | ||||||||||||  ||||||  ||  ||||||| |||  | |  |||    
T  13018124 gactccatcac-aaaacaaccactaaaaaatgatatccatgatcacccattgccactactcaccctaaaagaacgcccatctaaatcaaacaccctgtcc 13018222  T
Q  216 tcatcaccaaagttgaaccacatc 239  Q
    ||||||||| |||||| |||||||    
T  13018223 tcatcaccatagttgagccacatc 13018246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 306
Target Start/End: Original strand, 39021122 - 39021267
Alignment:
Q  163 catcgtcactactcaccccgaaagaagaccgc-tctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcg-aaat 260  Q
    |||||||||||||||| || ||||||   ||| || |||||||| ||||  |||||| |||||||| | | ||||||||||||| ||||||| || |||     
T  39021122 catcgtcactactcacacccaaagaaacacgcgtcaaaatgaaactctcagtcctcaacaccaaagctaagccacatccgaaaaactcatatccgaaaag 39021221  T
Q  261 atcattccgctatcaccccctctcaacctccgatacaccgaaagaa 306  Q
    |||| || |||| ||||  ||||| ||||||||| |||| ||||||    
T  39021222 atcaatcagctaccaccatctctcgacctccgatccaccaaaagaa 39021267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 14879708 - 14879648
Alignment:
Q  129 aaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactcaccccgaaagaa 188  Q
    ||||||||||||||||| |||||| ||  ||||| ||||||||||| ||||||||||||||    
T  14879708 aaacgaccactgaaaaaacgatatccaacaccacacatcgtcactattcaccccgaaagaa 14879648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 40689518 - 40689597
Alignment:
Q  80 caacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 160  Q
    |||||||||| ||||||||||||||||| ||||| | | || |||||  |||||| || ||||||||||||| ||||||||    
T  40689518 caacacccacaaaaataaacatcaccacttaaaaaaaatttcttcac-aaaacgatcattgaaaaacgatattcataacca 40689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 46358167 - 46358266
Alignment:
Q  80 caacacccaccaa-aataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactca 177  Q
    |||||||||| || ||||||||||| |||||||||||||||  |||||| |||||||   || |||||||| || ||||||||| ||||  |||||||||    
T  46358167 caacacccacaaagaataaacatcatcacctaaaacagactccttcacgaaaacgacatatgaaaaaacgaaatccataaccacgcatcaccactactca 46358266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 16266052 - 16266000
Alignment:
Q  62 cttcaacacacataacgacaacacccaccaaaataaacatcaccacctaaaaca 115  Q
    ||||||||| ||| | ||||||| |||||||||||||||||||| |||||||||    
T  16266052 cttcaacacccatgaggacaacatccaccaaaataaacatcacc-cctaaaaca 16266000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 23328188 - 23328233
Alignment:
Q  156 aaccacccatcgtcactactcaccccgaaagaagaccgctctaaat 201  Q
    |||||||||||||||||||||||||| |||||| ||| ||| ||||    
T  23328188 aaccacccatcgtcactactcacccccaaagaacaccactcaaaat 23328233  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 25648017 - 25647905
Alignment:
Q  66 aacacacataacgacaacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccat 165  Q
    ||||||||| | ||| ||||||||||||  | |  ||||||| ||||||| |||   ||||| |||| |||||||||||||||||| |  ||||| ||||    
T  25648017 aacacacatgaggaccacacccaccaaataacatgtcaccacataaaacatactccatcacg-aaaccaccactgaaaaacgatatcc--aaccatccat 25647921  T
Q  166 cgtcactactcacccc 181  Q
    | ||||||||||||||    
T  25647920 catcactactcacccc 25647905  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 28937498 - 28937574
Alignment:
Q  104 ccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    |||||||||||||||   |||||| ||  |||||||| ||||||||||| ||  ||||||||||| |||||||||||    
T  28937498 ccacctaaaacagaccccttcacgaaagtgaccactgtaaaaacgatatccaataccacccatcgccactactcacc 28937574  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 33143733 - 33143813
Alignment:
Q  101 tcaccacctaaaacagacttattcacgtaaacgaccactgaa-aaacgatatacataaccacccatcgtcactactcaccc 180  Q
    ||||||||||||||| |||  |||||| |||| ||||||||| ||||||||| ||   ||| || ||||||||||||||||    
T  33143733 tcaccacctaaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccatccgtcgtcactactcaccc 33143813  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 50518852 - 50518956
Alignment:
Q  82 acacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccc 180  Q
    ||||||| ||||||| || |||||| ||||||||||||  |||||| | || ||||||| |||||||||||   |||| | ||||||||||||||||||     
T  50518852 acacccaacaaaatacacctcaccatctaaaacagactccttcacg-ataccaccactgtaaaaacgatat--ctaacgatccatcgtcactactcacct 50518948  T
Q  181 cgaaagaa 188  Q
    | ||||||    
T  50518949 ccaaagaa 50518956  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 37024 - 36920
Alignment:
Q  82 acacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccc 180  Q
    ||||||| ||||||| || |||||||||||||||||||  |||||| |||| ||||||| |||||||| || |  ||||| ||| |||||||||||||||    
T  37024 acacccaacaaaatacacgtcaccacctaaaacagactccttcacg-aaaccaccactgtaaaaacgacatcc--aaccatccaccgtcactactcaccc 36928  T
Q  181 cgaaagaa 188  Q
    | ||||||    
T  36927 ccaaagaa 36920  T

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Target: scaffold0499 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 6863 - 6828
Alignment:
Q  78 gacaacacccaccaaaataaacatcaccacctaaaa 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  6863 gacaacacccaccaaaataaacatcaccacctaaaa 6828  T

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Target: scaffold0063 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 58439 - 58339
Alignment:
Q  89 ccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaac-gatatacataaccacccatcgtcactactcaccccgaaaga 187  Q
    ||||| || ||||||||||| ||||||||||  |||||| ||||||||| || ||||| ||||| ||  || |||| |||||||||||||| || |||||    
T  58439 ccaaagtacacatcaccaccaaaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacactacccgtcgtcactactcacacccaaaga 58340  T
Q  188 a 188  Q
    |    
T  58339 a 58339  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 41905 - 42004
Alignment:
Q  81 aacacccaccaaaataaacatcaccacctaaaacagacttattcacgtaaacgaccact-gaaaaacgatatacataaccacccatcgtcactactcacc 179  Q
    ||||||||  |||||| |||||||||||||||||| | |  ||| || |||||||| ||  ||||||||||| |  ||||||||||||||||||||| ||    
T  41905 aacacccataaaaatacacatcaccacctaaaacaaattccttctcggaaacgacctctataaaaacgatatcc--aaccacccatcgtcactactcgcc 42002  T

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