View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10145A_low_180 (Length: 321)
Name: NF10145A_low_180
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_180 |
 | |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0002 (2 HSPs) |
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| [»] chr4 (11 HSPs) |
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| [»] chr5 (5 HSPs) |
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| [»] chr1 (7 HSPs) |
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| [»] chr3 (11 HSPs) |
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| [»] chr7 (8 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr2 (13 HSPs) |
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| [»] scaffold0131 (1 HSPs) |
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| [»] chr6 (7 HSPs) |
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| [»] scaffold0418 (2 HSPs) |
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| [»] scaffold0112 (1 HSPs) |
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Alignment Details
Target: scaffold0029 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 5 - 321
Target Start/End: Original strand, 134449 - 134765
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134449 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
134548 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134549 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
134648 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134649 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
134748 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
134749 |
agggctttacttcttga |
134765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 305; Significance: 1e-172; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 5 - 321
Target Start/End: Original strand, 312276 - 312592
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312276 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
312375 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312376 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
312475 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312476 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
312575 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
312576 |
agggctttacttcttga |
312592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 5 - 321
Target Start/End: Original strand, 327730 - 328046
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327730 |
gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg |
327829 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327830 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
327929 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327930 |
tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
328029 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
328030 |
agggctttacttcttga |
328046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 280; Significance: 1e-157; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 34 - 321
Target Start/End: Original strand, 8654697 - 8654984
Alignment:
| Q |
34 |
tcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
133 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654697 |
tcttaggggtagtgttggtgctggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
8654796 |
T |
|
| Q |
134 |
tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654797 |
tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
8654896 |
T |
|
| Q |
234 |
agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654897 |
agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
8654984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 5 - 321
Target Start/End: Original strand, 3129577 - 3129890
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
3129577 |
gtttcgtgttggtggagggaggtgagtcgttttaggggtagtgatggtgatggagagggcggctggtttgttgatcatgtggctaggagggttggagatg |
3129676 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
3129677 |
gagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaataagttcatgtc |
3129776 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
3129777 |
tgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag---atgttagcggagtgt |
3129873 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3129874 |
agggctttacttcttga |
3129890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 68 - 321
Target Start/End: Complemental strand, 47541406 - 47541154
Alignment:
| Q |
68 |
tggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttcc |
167 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
47541406 |
tggtttgttgatcatgtggctagaagg-ttggagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgttcgttttt |
47541308 |
T |
|
| Q |
168 |
gtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtag |
267 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||| | |
|
|
| T |
47541307 |
gtagactgtttgagttaacagagaataagttcatgtctgtggcagacttgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcg |
47541208 |
T |
|
| Q |
268 |
gttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
47541207 |
tttgtggcagtggaaggaggagatgttagcggagtgtagggctttacttcttga |
47541154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 137 - 321
Target Start/End: Original strand, 7662966 - 7663150
Alignment:
| Q |
137 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
236 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
7662966 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7663065 |
T |
|
| Q |
237 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|| |||| |||| ||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
7663066 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga |
7663150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 119 - 321
Target Start/End: Complemental strand, 2631829 - 2631627
Alignment:
| Q |
119 |
ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
218 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
2631829 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
2631730 |
T |
|
| Q |
219 |
tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
318 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
2631729 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttct |
2631630 |
T |
|
| Q |
319 |
tga |
321 |
Q |
| |
|
||| |
|
|
| T |
2631629 |
tga |
2631627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 118 - 321
Target Start/End: Complemental strand, 20675454 - 20675251
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||| || ||||| |||||| |
|
|
| T |
20675454 |
gttttggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttg |
20675355 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| | |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| | | ||||||||| ||||||||| |
|
|
| T |
20675354 |
ctctttgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgcttgatgagtgtaggactttacttc |
20675255 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
20675254 |
ttga |
20675251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 174 - 321
Target Start/End: Original strand, 23873240 - 23873387
Alignment:
| Q |
174 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
273 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||| || |
|
|
| T |
23873240 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatg |
23873339 |
T |
|
| Q |
274 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
23873340 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
23873387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 55298996 - 55298849
Alignment:
| Q |
174 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
273 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| ||||||||||||||||||| || || |
|
|
| T |
55298996 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg |
55298897 |
T |
|
| Q |
274 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
55298896 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
55298849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 128 - 321
Target Start/End: Original strand, 8486699 - 8486892
Alignment:
| Q |
128 |
gataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttg |
227 |
Q |
| |
|
||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || | |||||| | ||||||| |
|
|
| T |
8486699 |
gataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgttg |
8486798 |
T |
|
| Q |
228 |
attcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||| | |||||||| |||||||||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
8486799 |
attcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggagttgctagattagtgtagggctttacttcttga |
8486892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7662904 - 7662952
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtg |
53 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||| ||||| |
|
|
| T |
7662904 |
gtttcgtgttggtggggggaggtgagtcgtattagggatagtggtggtg |
7662952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 49926112 - 49926177
Alignment:
| Q |
256 |
gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||| || || |||||| |||||||||||| ||||||| ||||||||||||||| || ||||| |
|
|
| T |
49926112 |
gtggaggcggagattgtgggcgtgggaggaggagttgttagtggagtgtagggcttttctgcttga |
49926177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 5 - 321
Target Start/End: Original strand, 10486515 - 10486831
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10486515 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagtgcagctggtttgttgatcatgtggctaggagggttggagatg |
10486614 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10486615 |
gagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaataagttcatgtc |
10486714 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10486715 |
tgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgttagcggagtgt |
10486814 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10486815 |
agggctttacttcttga |
10486831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 89 - 321
Target Start/End: Complemental strand, 34481408 - 34481176
Alignment:
| Q |
89 |
aggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacag |
188 |
Q |
| |
|
||||| ||||| ||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | || || || ||||||||||||||| |
|
|
| T |
34481408 |
aggagagttggtgatggggctgatacttcgttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacag |
34481309 |
T |
|
| Q |
189 |
agaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagga |
288 |
Q |
| |
|
||||||||| ||||||||||||| | ||| | |||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34481308 |
agaataagtctatgtctgtggcatatttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggg |
34481209 |
T |
|
| Q |
289 |
cttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||| ||| |||||||||||||||||||||||| |
|
|
| T |
34481208 |
gttgctagaggagtgtagggctttacttcttga |
34481176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 587859 - 587745
Alignment:
| Q |
207 |
tggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
306 |
Q |
| |
|
||||| ||||||| ||||| ||||||||| ||||||| | | ||||||||||| |||||| | ||| |||||||||||| |||||| ||||||||| |
|
|
| T |
587859 |
tggcaaacttgttctctgtgagttcggagcattggggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtag |
587760 |
T |
|
| Q |
307 |
ggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
587759 |
ggctttacttcttga |
587745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 321
Target Start/End: Original strand, 35122384 - 35122617
Alignment:
| Q |
88 |
taggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaaca |
187 |
Q |
| |
|
||||| ||| || ||||| ||| ||||||||||||||| |||||||||| | |||||||||||| ||| || || |||||| ||||||| ||| | |
|
|
| T |
35122384 |
taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttgatgatgttccttttagtgagcggtttcgtaggttgtttgacttagct |
35122483 |
T |
|
| Q |
188 |
gagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagg |
287 |
Q |
| |
|
||||| || || |||||||| | |||| ||| |||| ||||||| | |||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
35122484 |
gagaacaaaaccatttctgtggcgaatatgttctctcttgacctggagcagggaggggttgggtggaggtggagacgtaggttgtgggcttgggaggaga |
35122583 |
T |
|
| Q |
288 |
acttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|| |||| |||| |||||||||||| ||||| |
|
|
| T |
35122584 |
ctttattagaggagcttagggctttactgcttga |
35122617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 27795756 - 27795720
Alignment:
| Q |
277 |
gtgggaggaggacttgttagcggagtgtagggcttta |
313 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27795756 |
gtgggaggaggacttggtagaggagtgtagggcttta |
27795720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 30 - 321
Target Start/End: Complemental strand, 21528685 - 21528390
Alignment:
| Q |
30 |
gtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttgga |
129 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
21528685 |
gtcgtcttaggggtagtgatggtgatggagagagcggatggtttgttgatcatgtggctaggagggttggagatgaagctgatacgttgttttggttgga |
21528586 |
T |
|
| Q |
130 |
taggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgat |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||||| |
|
|
| T |
21528585 |
taggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagttcatgtctgttggagacttgttctctgttgat |
21528486 |
T |
|
| Q |
230 |
tcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggag----tgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||| | ||||||||||||||||||| |
|
|
| T |
21528485 |
tcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcggtggagacgtagggctttacttcttga |
21528390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 36306321 - 36306013
Alignment:
| Q |
13 |
ttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggagctaat |
112 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||| | ||| || || | || ||||||| | | ||||||||||||||||||||||| || || |
|
|
| T |
36306321 |
ttggtggagggaggtgagtcgtcttagtgatagtgttagtgagggtgattgtgggtggtttgtcggccacgtggctaggagggttggagatggttctgat |
36306222 |
T |
|
| Q |
113 |
acgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcag |
212 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||| ||||||||| | |||| |||||||| |
|
|
| T |
36306221 |
acgttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggcag |
36306122 |
T |
|
| Q |
213 |
acttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttt |
312 |
Q |
| |
|
||||||| |||||||||| ||||||| ||||||| | ||||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
36306121 |
acttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttagaggagtgtagggcttt |
36306022 |
T |
|
| Q |
313 |
acttcttga |
321 |
Q |
| |
|
||||||||| |
|
|
| T |
36306021 |
acttcttga |
36306013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 37531015 - 37530795
Alignment:
| Q |
101 |
gatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagttta |
200 |
Q |
| |
|
||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | | || || ||||||||||||||||||||||| || |
|
|
| T |
37531015 |
gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta |
37530916 |
T |
|
| Q |
201 |
tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgga |
300 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||| ||| |
|
|
| T |
37530915 |
tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga |
37530816 |
T |
|
| Q |
301 |
gtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
37530815 |
gtgtagggctttacttcttga |
37530795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 174 - 321
Target Start/End: Original strand, 32353061 - 32353208
Alignment:
| Q |
174 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
273 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
32353061 |
tgtttgagttaacagagaataagtctatgtccgtggccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatg |
32353160 |
T |
|
| Q |
274 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||| ||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
32353161 |
gcagtggaaggaggagttgctagatgagtgtagggctttacttcttga |
32353208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 118 - 321
Target Start/End: Original strand, 48073139 - 48073342
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
48073139 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
48073238 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
48073239 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggagttgctagatgagtgtggggctttacttc |
48073338 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
48073339 |
ttga |
48073342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 48265548 - 48265629
Alignment:
| Q |
240 |
ggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48265548 |
ggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttga |
48265629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 30970447 - 30970519
Alignment:
| Q |
249 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||| ||||| |||||| |||||||||||| || | |||||||||||||| ||||||||||| |
|
|
| T |
30970447 |
tgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttga |
30970519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 37 - 321
Target Start/End: Original strand, 49731559 - 49731843
Alignment:
| Q |
37 |
taggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtgg |
136 |
Q |
| |
|
||||||||||||||||| ||||||| | || ||||||| ||||| |||||||||||||||||||||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
49731559 |
taggggtagtgatggtgatggagagtgcggctggtttgttgatcatgtggctaggagggttggagatggagctgacacattgttttggtttgataggtgg |
49731658 |
T |
|
| Q |
137 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
236 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
49731659 |
ttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagttcatgtatgtggcagacttgttctctgttgatccggagc |
49731758 |
T |
|
| Q |
237 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
49731759 |
agcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgttggcggagtgtagggctttacttcttga |
49731843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 8 - 321
Target Start/End: Original strand, 30166942 - 30167255
Alignment:
| Q |
8 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggag |
107 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||| ||||| || || | || |||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
30166942 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt |
30167041 |
T |
|
| Q |
108 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
207 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||| | |||| ||| |
|
|
| T |
30167042 |
ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgt |
30167141 |
T |
|
| Q |
208 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg |
307 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30167142 |
ggcagacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg |
30167241 |
T |
|
| Q |
308 |
gctttacttcttga |
321 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30167242 |
actttacttcttga |
30167255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 321
Target Start/End: Original strand, 2813208 - 2813411
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
2813208 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
2813307 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
2813308 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
2813407 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
2813408 |
ttga |
2813411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 118 - 321
Target Start/End: Complemental strand, 29309840 - 29309637
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| ||||| |||||| |
|
|
| T |
29309840 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg |
29309741 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| ||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||| |
|
|
| T |
29309740 |
ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggcgttacttc |
29309641 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
29309640 |
ttga |
29309637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 118 - 321
Target Start/End: Original strand, 6176186 - 6176389
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||| ||||||||||| |||||| || || |||||| |
|
|
| T |
6176186 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg |
6176285 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
6176286 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggagttgctagatgagtgtagggctttacttc |
6176385 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
6176386 |
ttga |
6176389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 9379447 - 9379326
Alignment:
| Q |
200 |
atgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgg |
299 |
Q |
| |
|
|||| ||||||| ||||||| | ||||||||| ||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| ||||||||| |
|
|
| T |
9379447 |
atgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatgttagcgg |
9379348 |
T |
|
| Q |
300 |
agtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||| ||||| ||||| |
|
|
| T |
9379347 |
agtgtagggcattactacttga |
9379326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 23602074 - 23602002
Alignment:
| Q |
249 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
23602074 |
tgtggaggtggagacataggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
23602002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 25872955 - 25873019
Alignment:
| Q |
257 |
tggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||| |||| |
|
|
| T |
25872955 |
tggagacgtaggttatggcagtgggaggaggggttgctagaggagtgtagggctttactttttga |
25873019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 8943653 - 8943596
Alignment:
| Q |
249 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
306 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||| || |||| |||||||||||| |
|
|
| T |
8943653 |
tgtggaagtggagacgtaggttgtgggcgtgggaggaagatttgtaagcggagtgtag |
8943596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 46248738 - 46248776
Alignment:
| Q |
278 |
tgggaggaggacttgttagcggagtgtagggctttactt |
316 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
46248738 |
tgggaggaagacttgttaggggagtgtagggctttactt |
46248776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 48569906 - 48569944
Alignment:
| Q |
277 |
gtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
48569906 |
gtgggaggaggacttggtagaggagtgtagggctttact |
48569944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 8 - 321
Target Start/End: Original strand, 15653303 - 15653616
Alignment:
| Q |
8 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggag |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| ||||| || || | || ||||||| || | |||||||||||||||||||||||| |
|
|
| T |
15653303 |
tcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttgttggccacgtggctaggagggttggagatggat |
15653402 |
T |
|
| Q |
108 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
207 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| | |||||| | |
|
|
| T |
15653403 |
ctgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctat |
15653502 |
T |
|
| Q |
208 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg |
307 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15653503 |
ggcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg |
15653602 |
T |
|
| Q |
308 |
gctttacttcttga |
321 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
15653603 |
gctttacttcttga |
15653616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 8 - 277
Target Start/End: Complemental strand, 46624235 - 46623966
Alignment:
| Q |
8 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggag |
107 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||| ||| | || || | || ||||||| || || ||||||||||||||| ||||||| |
|
|
| T |
46624235 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgttggcgagggtgactgtgggtggtttgttggtcacgtggctaggagggttagagatggtt |
46624136 |
T |
|
| Q |
108 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
207 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||| | |||||||| |
|
|
| T |
46624135 |
ctgatacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctcatgtctgt |
46624036 |
T |
|
| Q |
208 |
ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcag |
277 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||| |
|
|
| T |
46624035 |
ggcagacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag |
46623966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 321
Target Start/End: Complemental strand, 13440485 - 13440282
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
13440485 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
13440386 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||||||||||||||||| || ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
13440385 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggagttgctagatgagtgttgggctttacttc |
13440286 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
13440285 |
ttga |
13440282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 309
Target Start/End: Original strand, 12378436 - 12378627
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| | |||| || | | ||| ||||||||||||| ||||||||| | |||||||||||| | ||| |
|
|
| T |
12378436 |
gttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggagaataagatcatgtctgtggcaaatttg |
12378535 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc |
309 |
Q |
| |
|
|| | |||| | ||| ||| |||||||| ||||| |||| |||| || ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12378536 |
ttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggagatgttagcggagtgtagggc |
12378627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 45943152 - 45943080
Alignment:
| Q |
249 |
tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||||||| |||| || ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
| T |
45943152 |
tgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga |
45943080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 43105669 - 43105546
Alignment:
| Q |
192 |
ataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggactt |
291 |
Q |
| |
|
|||||| | |||| |||||||||||||| ||| | |||| | || ||||| | ||||||||||||||| || ||||||||||| ||||||||||| | |
|
|
| T |
43105669 |
ataagtctttgtcggtggcagacttgttctctactagttcgcaacaatggggagatttgtggaggtggaggcgcaggttgtggcaatgggaggaggagat |
43105570 |
T |
|
| Q |
292 |
gttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||| ||||||||||| ||||| |
|
|
| T |
43105569 |
gttagcagagtgtagggcgttact |
43105546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 27723973 - 27724011
Alignment:
| Q |
278 |
tgggaggaggacttgttagcggagtgtagggctttactt |
316 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
27723973 |
tgggaggaagacttgttaggggagtgtagggctttactt |
27724011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 41339825 - 41339760
Alignment:
| Q |
250 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||||||| || | ||||||||| |||||||||||| || |||| |||||||||| ||||||| |
|
|
| T |
41339825 |
gtggaggtggcgatgcaggttgtgggcgtgggaggaggaattattagaggagtgtaggactttact |
41339760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 5 - 321
Target Start/End: Complemental strand, 7452897 - 7452581
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| ||||| || || | || |||||| | | |||||||||||||||||||||| |
|
|
| T |
7452897 |
gtttcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttctcgcccacgtggctaggagggttggagatg |
7452798 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
204 |
Q |
| |
|
| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||| ||||||| |
|
|
| T |
7452797 |
gttctgatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtc |
7452698 |
T |
|
| Q |
205 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
304 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
7452697 |
tgtggcagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggaggtgttattagaggagtgt |
7452598 |
T |
|
| Q |
305 |
agggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
7452597 |
agggctttacttcttga |
7452581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 318
Target Start/End: Original strand, 16420719 - 16420918
Alignment:
| Q |
119 |
ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
218 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
16420719 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
16420818 |
T |
|
| Q |
219 |
tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
318 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
16420819 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagcgtagggctttacttct |
16420918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 12134628 - 12134563
Alignment:
| Q |
250 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||||||| | |||| ||||||| |||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12134628 |
gtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttact |
12134563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 19384572 - 19384621
Alignment:
| Q |
272 |
tggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
19384572 |
tggcagtgggaggaggagatgttagtggagtgtagggctttacttcttga |
19384621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 13879354 - 13879390
Alignment:
| Q |
277 |
gtgggaggaggacttgttagcggagtgtagggcttta |
313 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13879354 |
gtgggaggaggacttggtagaggagtgtagggcttta |
13879390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 321
Target Start/End: Complemental strand, 45422062 - 45421748
Alignment:
| Q |
8 |
tcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatggag |
107 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||| ||||| || || | || |||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
45422062 |
tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt |
45421963 |
T |
|
| Q |
108 |
ctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt |
207 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||| | |||| ||| |
|
|
| T |
45421962 |
ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtatgt |
45421863 |
T |
|
| Q |
208 |
ggcagacttgttatctgttgattcggagcag-tggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
306 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| |||| |||| ||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
45421862 |
ggcagacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttagcggagtgtag |
45421763 |
T |
|
| Q |
307 |
ggctttacttcttga |
321 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
45421762 |
ggcttttcttcttga |
45421748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 13550671 - 13550353
Alignment:
| Q |
3 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggaga |
102 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| | ||||| ||| | || || ||||||| |||| ||| ||||| ||||| || |
|
|
| T |
13550671 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga |
13550572 |
T |
|
| Q |
103 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
202 |
Q |
| |
|
||| || |||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| |
|
|
| T |
13550571 |
tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata |
13550472 |
T |
|
| Q |
203 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
302 |
Q |
| |
|
| ||||| |||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||| |
|
|
| T |
13550471 |
ttcgtggcggacttgctttctgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagt |
13550372 |
T |
|
| Q |
303 |
gtagggctttacttcttga |
321 |
Q |
| |
|
| ||||||||| ||||||| |
|
|
| T |
13550371 |
gcagggctttaattcttga |
13550353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 118 - 320
Target Start/End: Original strand, 26894320 - 26894522
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26894320 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26894419 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26894420 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26894519 |
T |
|
| Q |
318 |
ttg |
320 |
Q |
| |
|
||| |
|
|
| T |
26894520 |
ttg |
26894522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 118 - 320
Target Start/End: Original strand, 26899759 - 26899961
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26899759 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26899858 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26899859 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26899958 |
T |
|
| Q |
318 |
ttg |
320 |
Q |
| |
|
||| |
|
|
| T |
26899959 |
ttg |
26899961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 43627875 - 43627728
Alignment:
| Q |
174 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg |
273 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| |||||| | ||| ||||||||||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
43627875 |
tgtttgagttaacagagaataagtctatgttcgtggccgacttgctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatg |
43627776 |
T |
|
| Q |
274 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
43627775 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
43627728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 31085452 - 31085548
Alignment:
| Q |
225 |
ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||||||| | |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
31085452 |
ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttagcagagtgtagggctttacttcttga |
31085548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 33548197 - 33548101
Alignment:
| Q |
225 |
ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
33548197 |
ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
33548101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 13551124 - 13550882
Alignment:
| Q |
3 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggaga |
102 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| | ||||| ||| | || || ||||||| |||| ||| ||||| ||||| || |
|
|
| T |
13551124 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga |
13551025 |
T |
|
| Q |
103 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
202 |
Q |
| |
|
||| || |||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| |
|
|
| T |
13551024 |
tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata |
13550925 |
T |
|
| Q |
203 |
tctgtggcagacttgttatctgttgattcggagcagtgggggg |
245 |
Q |
| |
|
| ||||| |||||| | ||||||||||||||||||||||||| |
|
|
| T |
13550924 |
ttcgtggcggacttgctttctgttgattcggagcagtgggggg |
13550882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 22052911 - 22052856
Alignment:
| Q |
266 |
aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
| T |
22052911 |
aggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga |
22052856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 36804196 - 36804147
Alignment:
| Q |
266 |
aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36804196 |
aggttgtgggcgtgggaggaggacttgttagaggagtgtagggctttact |
36804147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 36804400 - 36804362
Alignment:
| Q |
277 |
gtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36804400 |
gtgggaggaggacttgttagaggagtgtagggctttact |
36804362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 26679266 - 26679225
Alignment:
| Q |
119 |
ttttggttggataggtggttaggggatgttcctttttgtgtc |
160 |
Q |
| |
|
|||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
26679266 |
ttttggttggataggtgggttggtgatgttcctttttgtgtc |
26679225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 40176941 - 40176905
Alignment:
| Q |
277 |
gtgggaggaggacttgttagcggagtgtagggcttta |
313 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
40176941 |
gtgggaggaggacttggtagaggagtgtagggcttta |
40176905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 4144 - 4337
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggagatg |
104 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
4144 |
gtttcgtggtggtggagggaggtgagtcgtattaggggtagtgatggtgatggagagagcggttggtttgttgatcatgtggctcggagggttggagatg |
4243 |
T |
|
| Q |
105 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt |
198 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
4244 |
gagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaataagtt |
4337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 26205895 - 26205577
Alignment:
| Q |
3 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggaga |
102 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||| | ||||| ||| | || || |||||| |||| ||| ||||| ||||| || |
|
|
| T |
26205895 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga |
26205796 |
T |
|
| Q |
103 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
202 |
Q |
| |
|
|| ||| |||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||| |
|
|
| T |
26205795 |
tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg |
26205696 |
T |
|
| Q |
203 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
302 |
Q |
| |
|
|| ||||| |||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
26205695 |
tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt |
26205596 |
T |
|
| Q |
303 |
gtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26205595 |
gtagggctttacttcttga |
26205577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 321
Target Start/End: Complemental strand, 25318401 - 25318083
Alignment:
| Q |
3 |
gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggatggtttggtgatcttgtggctaggagggttggaga |
102 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||| |||| | ||||| ||| | || || |||||| |||| ||| ||||| ||||| || |
|
|
| T |
25318401 |
gagtttcttgttggtggtcggaggtgagtcgtcttaggtgtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga |
25318302 |
T |
|
| Q |
103 |
tggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg |
202 |
Q |
| |
|
|| ||| |||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||| |
|
|
| T |
25318301 |
tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg |
25318202 |
T |
|
| Q |
203 |
tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt |
302 |
Q |
| |
|
|| ||||| |||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
25318201 |
tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt |
25318102 |
T |
|
| Q |
303 |
gtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
25318101 |
gtagggctttacttcttga |
25318083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 321
Target Start/End: Original strand, 23347175 - 23347378
Alignment:
| Q |
118 |
gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
217 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
23347175 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg |
23347274 |
T |
|
| Q |
218 |
ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
317 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
23347275 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
23347374 |
T |
|
| Q |
318 |
ttga |
321 |
Q |
| |
|
|||| |
|
|
| T |
23347375 |
ttga |
23347378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 174 - 321
Target Start/End: Complemental strand, 15674205 - 15674054
Alignment:
| Q |
174 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtgggg----ggttttgtggaggtggagacgtaggt |
269 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| ||||| | ||||||||||| |||| ||||| || ||||||||||||||||||||| |
|
|
| T |
15674205 |
tgtttgagttaacggagaataagtctatgtctgtggccgacttactctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggt |
15674106 |
T |
|
| Q |
270 |
tgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| |
|
|
| T |
15674105 |
tgtggcagtgggaggaggagttgctagatgagtgcagggctttacttcttga |
15674054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 33630378 - 33630334
Alignment:
| Q |
269 |
ttgtggcagtgggaggaggacttgttagcggagtgtagggcttta |
313 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33630378 |
ttgtggcagtgggaggaggagatgttagcggagtgtagggcttta |
33630334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 4474998 - 4474935
Alignment:
| Q |
250 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttta |
313 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| | || |||| ||||| |||| ||||| |
|
|
| T |
4474998 |
gtggaggtggagacgtaggttgtgggcgtgggaggagaatttattagaggagtttaggacttta |
4474935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 321
Target Start/End: Complemental strand, 1683299 - 1683269
Alignment:
| Q |
291 |
tgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
1683299 |
tgttagcggagtgtagggctttacttcttga |
1683269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 137 - 321
Target Start/End: Complemental strand, 8088 - 7904
Alignment:
| Q |
137 |
ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
236 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
8088 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7989 |
T |
|
| Q |
237 |
agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
321 |
Q |
| |
|
|| |||| |||| ||||||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
7988 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga |
7904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8149 - 8102
Alignment:
| Q |
5 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtg |
53 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||| ||||| |
|
|
| T |
8149 |
gtttcgtgttggtgg-gggaggtgagtcgtattagggatagtggtggtg |
8102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 15490 - 15555
Alignment:
| Q |
250 |
gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
315 |
Q |
| |
|
|||||||||| | || || |||||| |||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
15490 |
gtggaggtggcgtcgcagattgtgggcgtgggaggaggatatgttagaggagtgtagggctttact |
15555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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