View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_189 (Length: 318)
Name: NF10145A_low_189
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_189 |
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Alignment Details
Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 5 - 311
Target Start/End: Original strand, 26769627 - 26769933
Alignment:
| Q |
5 |
gaaaataacataacgacctccaaaagtcattgccgtgatgtcatcaagcttctgttttcacccaaagattccatattagaagactgttttaaacacacaa |
104 |
Q |
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| T |
26769627 |
gaaaataacataacgacctccaaaagtcattgccgtgatgtcatcaagcttctgttttcacccaaagattccatattagaagactgttttaaacacacaa |
26769726 |
T |
|
| Q |
105 |
cataaacgaggccacctaaggtttttcattaatcaacaaggaaatgtttctagaaatgtcaattgaattcagaccggaattaaatgggtctgggtccaag |
204 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26769727 |
cataaacgaggctacctaaggtttttcattaatcaacaaggaaatgtttctagaaatgtcaattgaattcagaccggaattaaatgggtctgggtccaag |
26769826 |
T |
|
| Q |
205 |
ccgcctaaattctttagacataggcttagttgctaaagcacctcagccatttaataggtcaattctgttttataattaggatttagaagatttttgcata |
304 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26769827 |
ccgcctaaattttttagacataggcttagttgctaaagcacctcagccatttaataggtcaattctgttttataattaggatttagaagatttttgcata |
26769926 |
T |
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| Q |
305 |
tttttgg |
311 |
Q |
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||||||| |
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| T |
26769927 |
tttttgg |
26769933 |
T |
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