View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_230 (Length: 296)

Name: NF10145A_low_230
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_230
NF10145A_low_230
[»] chr1 (74 HSPs)
chr1 (149-274)||(15435074-15435199)
chr1 (162-268)||(34878486-34878592)
chr1 (169-267)||(35484600-35484698)
chr1 (162-254)||(31983965-31984057)
chr1 (162-255)||(10776675-10776768)
chr1 (149-267)||(7337865-7337983)
chr1 (162-240)||(7836981-7837059)
chr1 (169-255)||(14872423-14872509)
chr1 (16-78)||(15434942-15435004)
chr1 (149-255)||(45415343-45415449)
chr1 (18-77)||(5983800-5983859)
chr1 (149-252)||(29738838-29738941)
chr1 (18-77)||(45415522-45415581)
chr1 (162-252)||(18939109-18939199)
chr1 (174-244)||(41176977-41177047)
chr1 (171-260)||(3228049-3228138)
chr1 (16-77)||(21686837-21686898)
chr1 (18-77)||(1742245-1742304)
chr1 (18-77)||(7337732-7337791)
chr1 (162-272)||(1742048-1742158)
chr1 (23-77)||(35462111-35462165)
chr1 (170-259)||(44915425-44915515)
chr1 (162-254)||(5983621-5983713)
chr1 (162-258)||(21686654-21686750)
chr1 (179-255)||(26535184-26535260)
chr1 (169-265)||(51916874-51916970)
chr1 (18-77)||(7836865-7836924)
chr1 (19-77)||(8211980-8212038)
chr1 (19-77)||(10776531-10776589)
chr1 (169-255)||(49626694-49626780)
chr1 (18-74)||(39888159-39888215)
chr1 (18-77)||(11462517-11462576)
chr1 (18-77)||(14872604-14872663)
chr1 (18-77)||(15836156-15836215)
chr1 (169-260)||(32679321-32679412)
chr1 (30-73)||(35484472-35484515)
chr1 (162-231)||(15836001-15836070)
chr1 (24-77)||(16161795-16161848)
chr1 (182-255)||(27456324-27456397)
chr1 (169-218)||(32394820-32394869)
chr1 (162-255)||(45789349-45789442)
chr1 (162-246)||(11462663-11462747)
chr1 (171-255)||(35462262-35462346)
chr1 (18-77)||(940327-940386)
chr1 (173-260)||(12634946-12635033)
chr1 (18-77)||(32394962-32395021)
chr1 (18-77)||(34878347-34878406)
chr1 (165-215)||(8212128-8212178)
chr1 (31-77)||(19060871-19060917)
chr1 (169-255)||(44543057-44543143)
chr1 (175-252)||(4413091-4413168)
chr1 (24-77)||(9341688-9341741)
chr1 (24-77)||(47132864-47132917)
chr1 (24-77)||(49626875-49626928)
chr1 (171-255)||(940149-940233)
chr1 (25-77)||(32679174-32679226)
chr1 (37-77)||(50377292-50377332)
chr1 (18-77)||(21947687-21947746)
chr1 (172-255)||(21947843-21947925)
chr1 (18-77)||(23291711-23291770)
chr1 (162-260)||(6218042-6218140)
chr1 (18-76)||(13144881-13144939)
chr1 (43-77)||(31984142-31984176)
chr1 (24-77)||(3871390-3871443)
chr1 (16-77)||(27580195-27580256)
chr1 (24-77)||(34413172-34413225)
chr1 (24-77)||(41994388-41994441)
chr1 (24-77)||(44543234-44543287)
chr1 (24-60)||(12635148-12635184)
chr1 (169-217)||(31692685-31692733)
chr1 (162-258)||(34413306-34413402)
chr1 (33-73)||(34528695-34528735)
chr1 (228-260)||(47132694-47132726)
chr1 (162-218)||(50377149-50377204)
[»] chr3 (94 HSPs)
chr3 (162-260)||(45568659-45568757)
chr3 (149-260)||(10232846-10232957)
chr3 (162-260)||(40487101-40487199)
chr3 (149-260)||(47895927-47896038)
chr3 (171-260)||(9998242-9998331)
chr3 (162-267)||(40556480-40556585)
chr3 (172-260)||(21431401-21431489)
chr3 (149-252)||(12050850-12050953)
chr3 (169-260)||(48650957-48651048)
chr3 (162-255)||(38545616-38545709)
chr3 (171-260)||(47042276-47042365)
chr3 (149-265)||(32701269-32701385)
chr3 (172-260)||(35865158-35865246)
chr3 (18-77)||(9998427-9998486)
chr3 (173-260)||(10108014-10108101)
chr3 (18-77)||(10108196-10108255)
chr3 (18-77)||(10233030-10233089)
chr3 (18-77)||(36461500-36461559)
chr3 (18-77)||(40556672-40556731)
chr3 (149-267)||(6954898-6955016)
chr3 (171-260)||(10229250-10229339)
chr3 (199-267)||(43488849-43488917)
chr3 (18-77)||(6954765-6954824)
chr3 (18-77)||(12050717-12050776)
chr3 (18-77)||(43488659-43488718)
chr3 (18-77)||(45568514-45568573)
chr3 (169-263)||(7449124-7449217)
chr3 (169-263)||(7457266-7457359)
chr3 (149-255)||(33579649-33579755)
chr3 (169-267)||(36461653-36461751)
chr3 (23-77)||(40487285-40487339)
chr3 (149-250)||(9797732-9797830)
chr3 (18-77)||(10229436-10229495)
chr3 (18-77)||(12149853-12149912)
chr3 (149-255)||(21534012-21534116)
chr3 (162-260)||(31272021-31272120)
chr3 (18-77)||(38545759-38545818)
chr3 (18-77)||(38860189-38860248)
chr3 (18-77)||(47042118-47042177)
chr3 (16-77)||(20608966-20609027)
chr3 (16-77)||(35864999-35865060)
chr3 (16-77)||(44960019-44960080)
chr3 (169-270)||(50194505-50194606)
chr3 (172-260)||(52923340-52923428)
chr3 (18-77)||(23799979-23800038)
chr3 (18-65)||(36910710-36910757)
chr3 (177-260)||(43016631-43016714)
chr3 (18-77)||(47896112-47896171)
chr3 (169-255)||(629128-629214)
chr3 (23-77)||(21431585-21431639)
chr3 (24-77)||(7546567-7546620)
chr3 (16-77)||(9797601-9797657)
chr3 (16-77)||(20465037-20465098)
chr3 (16-65)||(33579852-33579901)
chr3 (16-77)||(43016815-43016876)
chr3 (18-75)||(52923186-52923243)
chr3 (171-255)||(953631-953715)
chr3 (16-76)||(9320018-9320078)
chr3 (220-267)||(20988028-20988075)
chr3 (22-77)||(21533882-21533937)
chr3 (169-248)||(26276015-26276094)
chr3 (30-77)||(29239300-29239347)
chr3 (18-77)||(31271876-31271935)
chr3 (18-77)||(48650803-48650862)
chr3 (172-218)||(20465192-20465238)
chr3 (169-231)||(54148793-54148855)
chr3 (35-77)||(54148951-54148993)
chr3 (201-254)||(9688488-9688541)
chr3 (24-77)||(12947352-12947405)
chr3 (24-77)||(27706308-27706361)
chr3 (32-77)||(53508182-53508227)
chr3 (169-267)||(29921820-29921920)
chr3 (169-267)||(29970973-29971073)
chr3 (18-73)||(32701457-32701510)
chr3 (183-243)||(37040575-37040635)
chr3 (225-260)||(1803246-1803281)
chr3 (34-77)||(4019694-4019737)
chr3 (162-249)||(7546397-7546484)
chr3 (30-77)||(8914665-8914712)
chr3 (18-77)||(53099750-53099809)
chr3 (34-77)||(53807945-53807988)
chr3 (162-260)||(21290034-21290132)
chr3 (225-255)||(53808140-53808170)
chr3 (31-72)||(3606738-3606779)
chr3 (169-218)||(4821625-4821674)
chr3 (24-77)||(21289896-21289949)
chr3 (226-267)||(36910934-36910975)
chr3 (24-77)||(51487063-51487116)
chr3 (24-77)||(51923680-51923733)
chr3 (32-76)||(4821766-4821810)
chr3 (169-265)||(23800131-23800230)
chr3 (162-190)||(29239184-29239212)
chr3 (199-255)||(29249024-29249080)
chr3 (172-255)||(46220459-46220543)
[»] chr8 (64 HSPs)
chr8 (149-260)||(31013771-31013882)
chr8 (161-260)||(10377475-10377574)
chr8 (165-255)||(27110680-27110770)
chr8 (162-255)||(25191279-25191372)
chr8 (172-255)||(17693836-17693919)
chr8 (171-264)||(8412571-8412664)
chr8 (169-262)||(45446031-45446124)
chr8 (18-77)||(37971246-37971305)
chr8 (16-77)||(20553306-20553367)
chr8 (149-247)||(37971086-37971181)
chr8 (18-77)||(7883308-7883367)
chr8 (18-77)||(23230606-23230665)
chr8 (169-255)||(8980980-8981066)
chr8 (18-77)||(10377652-10377711)
chr8 (169-252)||(23230430-23230512)
chr8 (18-77)||(28086880-28086939)
chr8 (152-254)||(15344090-15344192)
chr8 (152-254)||(15433155-15433257)
chr8 (152-254)||(15524459-15524561)
chr8 (16-77)||(17693679-17693740)
chr8 (16-77)||(20559809-20559870)
chr8 (16-77)||(20571371-20571432)
chr8 (172-248)||(3673236-3673312)
chr8 (24-76)||(8443587-8443639)
chr8 (18-77)||(3673404-3673463)
chr8 (18-77)||(7677350-7677409)
chr8 (149-248)||(7677480-7677579)
chr8 (18-77)||(16247290-16247349)
chr8 (18-77)||(40211369-40211428)
chr8 (149-255)||(20559944-20560050)
chr8 (149-255)||(20571506-20571612)
chr8 (165-255)||(28897494-28897584)
chr8 (18-76)||(45445878-45445936)
chr8 (172-253)||(7883463-7883544)
chr8 (162-255)||(20553458-20553551)
chr8 (171-248)||(33214853-33214930)
chr8 (169-260)||(14545123-14545215)
chr8 (18-74)||(25191134-25191190)
chr8 (169-261)||(29617677-29617769)
chr8 (171-255)||(40211528-40211612)
chr8 (18-77)||(14544970-14545029)
chr8 (30-77)||(18890785-18890832)
chr8 (30-77)||(34609793-34609840)
chr8 (18-77)||(40619140-40619199)
chr8 (169-255)||(1236913-1236999)
chr8 (31-77)||(8826172-8826218)
chr8 (162-264)||(8867603-8867705)
chr8 (24-77)||(1236772-1236825)
chr8 (24-77)||(1239472-1239525)
chr8 (24-77)||(39657410-39657463)
chr8 (16-76)||(471231-471291)
chr8 (24-76)||(14585663-14585715)
chr8 (172-256)||(24099484-24099567)
chr8 (172-248)||(29937905-29937981)
chr8 (34-77)||(5917714-5917757)
chr8 (171-218)||(8443743-8443789)
chr8 (162-213)||(8826033-8826084)
chr8 (171-250)||(41684221-41684300)
chr8 (179-249)||(27498565-27498635)
chr8 (200-254)||(36948688-36948742)
chr8 (30-75)||(5333391-5333436)
chr8 (36-77)||(24099343-24099384)
chr8 (30-74)||(27498443-27498487)
chr8 (206-258)||(41060482-41060534)
[»] chr6 (46 HSPs)
chr6 (149-267)||(12170265-12170383)
chr6 (149-260)||(33053370-33053481)
chr6 (162-260)||(3913789-3913886)
chr6 (172-267)||(68225-68320)
chr6 (18-77)||(33053237-33053296)
chr6 (18-74)||(3913643-3913699)
chr6 (171-259)||(24227936-24228024)
chr6 (164-255)||(605986-606077)
chr6 (18-77)||(606166-606225)
chr6 (165-260)||(29255660-29255755)
chr6 (149-255)||(29320064-29320173)
chr6 (169-260)||(32328805-32328896)
chr6 (149-267)||(23128388-23128506)
chr6 (171-255)||(9723602-9723687)
chr6 (18-77)||(7515271-7515330)
chr6 (18-77)||(23128580-23128639)
chr6 (18-77)||(32327286-32327345)
chr6 (149-247)||(30894427-30894524)
chr6 (198-267)||(9721761-9721830)
chr6 (165-218)||(32191950-32192003)
chr6 (162-258)||(32059688-32059784)
chr6 (171-254)||(7515426-7515509)
chr6 (18-77)||(29319947-29320006)
chr6 (18-77)||(32059871-32059930)
chr6 (18-77)||(34018522-34018581)
chr6 (31-77)||(127632-127678)
chr6 (16-74)||(13546730-13546788)
chr6 (16-77)||(30608581-30608643)
chr6 (24-77)||(30493491-30493544)
chr6 (30-77)||(1523363-1523410)
chr6 (18-61)||(20220856-20220899)
chr6 (18-61)||(22114840-22114883)
chr6 (23-77)||(7976254-7976308)
chr6 (198-248)||(9719643-9719693)
chr6 (24-77)||(30776627-30776680)
chr6 (162-254)||(4010715-4010807)
chr6 (18-74)||(29255514-29255570)
chr6 (33-77)||(31852272-31852316)
chr6 (149-249)||(34018348-34018448)
chr6 (18-77)||(68070-68129)
chr6 (30-77)||(14801782-14801829)
chr6 (162-260)||(1523185-1523283)
chr6 (18-76)||(3355080-3355138)
chr6 (31-77)||(32191813-32191859)
chr6 (24-77)||(8102681-8102734)
chr6 (171-255)||(27097834-27097918)
[»] chr5 (50 HSPs)
chr5 (169-267)||(7035996-7036094)
chr5 (149-267)||(13006997-13007115)
chr5 (149-267)||(38597566-38597684)
chr5 (169-255)||(6012360-6012446)
chr5 (18-77)||(9113794-9113853)
chr5 (16-77)||(13007189-13007250)
chr5 (169-250)||(38007143-38007224)
chr5 (169-260)||(25979933-25980024)
chr5 (162-249)||(26878294-26878380)
chr5 (18-77)||(38597757-38597816)
chr5 (149-255)||(31391959-31392065)
chr5 (171-260)||(26825204-26825293)
chr5 (162-253)||(34945204-34945295)
chr5 (171-260)||(15571261-15571350)
chr5 (162-255)||(7929979-7930068)
chr5 (18-77)||(6012207-6012266)
chr5 (18-77)||(6216859-6216918)
chr5 (149-244)||(9113927-9114022)
chr5 (181-260)||(11977171-11977250)
chr5 (18-77)||(26825390-26825449)
chr5 (18-77)||(35850759-35850818)
chr5 (18-77)||(11073969-11074028)
chr5 (18-77)||(14082442-14082501)
chr5 (30-77)||(14726542-14726589)
chr5 (18-77)||(24229853-24229912)
chr5 (18-77)||(31391822-31391881)
chr5 (24-77)||(2979388-2979441)
chr5 (169-253)||(6216676-6216761)
chr5 (179-267)||(24230018-24230107)
chr5 (18-66)||(7930148-7930196)
chr5 (172-246)||(11074124-11074199)
chr5 (18-77)||(11977004-11977063)
chr5 (18-73)||(25980122-25980177)
chr5 (38-77)||(28386895-28386934)
chr5 (162-260)||(14211009-14211106)
chr5 (162-260)||(39567071-39567169)
chr5 (24-77)||(14211180-14211233)
chr5 (24-77)||(19103549-19103602)
chr5 (24-77)||(28540988-28541041)
chr5 (200-267)||(13421711-13421779)
chr5 (162-246)||(35850574-35850657)
chr5 (204-260)||(41630286-41630342)
chr5 (18-77)||(8096566-8096625)
chr5 (18-77)||(11867628-11867687)
chr5 (18-61)||(37986182-37986225)
chr5 (18-77)||(38007318-38007377)
chr5 (225-267)||(8985215-8985257)
chr5 (181-246)||(4770927-4770992)
chr5 (24-77)||(19280991-19281044)
chr5 (163-260)||(28541122-28541219)
[»] chr4 (85 HSPs)
chr4 (149-255)||(2520578-2520684)
chr4 (162-256)||(26091128-26091222)
chr4 (162-267)||(26633885-26633990)
chr4 (172-268)||(22610972-22611068)
chr4 (149-260)||(4142956-4143067)
chr4 (162-255)||(10496143-10496236)
chr4 (172-260)||(19853736-19853824)
chr4 (169-254)||(22558687-22558772)
chr4 (16-77)||(22611164-22611225)
chr4 (172-260)||(13633910-13633998)
chr4 (176-264)||(56156782-56156870)
chr4 (18-77)||(35348288-35348347)
chr4 (169-260)||(53810824-53810915)
chr4 (162-248)||(9178165-9178251)
chr4 (169-255)||(54021662-54021748)
chr4 (169-265)||(22300636-22300732)
chr4 (171-274)||(5119120-5119223)
chr4 (18-77)||(11300060-11300119)
chr4 (18-77)||(32766495-32766554)
chr4 (18-77)||(40066124-40066183)
chr4 (162-260)||(48257664-48257762)
chr4 (171-248)||(9165267-9165344)
chr4 (16-77)||(17949391-17949452)
chr4 (16-77)||(17953243-17953304)
chr4 (16-77)||(56040713-56040774)
chr4 (171-255)||(33920853-33920937)
chr4 (30-77)||(4142836-4142883)
chr4 (30-77)||(13634096-13634143)
chr4 (18-77)||(21686311-21686369)
chr4 (172-267)||(21686465-21686560)
chr4 (30-77)||(26633752-26633799)
chr4 (18-77)||(43510178-43510237)
chr4 (18-77)||(56156711-56156770)
chr4 (18-76)||(24099136-24099194)
chr4 (162-260)||(35348102-35348200)
chr4 (16-77)||(19853579-19853640)
chr4 (169-265)||(21662276-21662371)
chr4 (169-265)||(21671040-21671135)
chr4 (199-267)||(51024713-51024781)
chr4 (18-74)||(53811012-53811068)
chr4 (18-77)||(33921032-33921091)
chr4 (162-245)||(43510010-43510093)
chr4 (149-266)||(45418319-45418433)
chr4 (169-260)||(51888438-51888529)
chr4 (18-77)||(2520758-2520819)
chr4 (16-77)||(5119320-5119381)
chr4 (16-77)||(12199760-12199821)
chr4 (17-78)||(26090984-26091045)
chr4 (24-77)||(28857380-28857433)
chr4 (24-77)||(31891369-31891422)
chr4 (36-77)||(36204475-36204516)
chr4 (171-256)||(36204604-36204689)
chr4 (18-77)||(29120432-29120491)
chr4 (169-264)||(29961151-29961246)
chr4 (18-77)||(44596645-44596704)
chr4 (30-77)||(53444099-53444146)
chr4 (18-77)||(54021841-54021900)
chr4 (27-77)||(19896617-19896667)
chr4 (32-74)||(35395756-35395798)
chr4 (172-254)||(53443928-53444010)
chr4 (16-73)||(10496320-10496377)
chr4 (24-77)||(22300827-22300880)
chr4 (171-260)||(24099295-24099384)
chr4 (24-77)||(36194683-36194736)
chr4 (24-77)||(52944289-52944342)
chr4 (162-254)||(22039013-22039105)
chr4 (164-260)||(27651744-27651840)
chr4 (149-260)||(32766309-32766421)
chr4 (18-77)||(8670466-8670525)
chr4 (30-77)||(27651918-27651965)
chr4 (18-77)||(37030242-37030301)
chr4 (34-77)||(38166313-38166356)
chr4 (30-73)||(49072809-49072852)
chr4 (181-267)||(1621719-1621805)
chr4 (225-255)||(9643178-9643208)
chr4 (31-77)||(43353611-43353657)
chr4 (169-255)||(47320623-47320709)
chr4 (24-74)||(52934022-52934072)
chr4 (171-260)||(9713697-9713786)
chr4 (162-267)||(18935576-18935681)
chr4 (24-77)||(31381718-31381771)
chr4 (24-77)||(38706756-38706809)
chr4 (24-77)||(47320469-47320522)
chr4 (19-76)||(52060993-52061050)
chr4 (30-74)||(29961005-29961049)
[»] chr2 (77 HSPs)
chr2 (149-267)||(4778532-4778650)
chr2 (149-260)||(7646258-7646369)
chr2 (149-267)||(12677498-12677616)
chr2 (149-250)||(7678080-7678181)
chr2 (162-267)||(27097620-27097725)
chr2 (171-255)||(1421462-1421546)
chr2 (149-260)||(7448034-7448145)
chr2 (149-260)||(31788242-31788353)
chr2 (162-267)||(35220110-35220212)
chr2 (162-260)||(4098889-4098987)
chr2 (162-260)||(36943339-36943437)
chr2 (162-267)||(43397334-43397439)
chr2 (149-249)||(18763265-18763365)
chr2 (18-77)||(1421647-1421706)
chr2 (18-77)||(7646444-7646503)
chr2 (18-77)||(7677943-7678002)
chr2 (18-77)||(36943191-36943250)
chr2 (163-252)||(5428084-5428173)
chr2 (172-256)||(9169482-9169566)
chr2 (18-77)||(7448218-7448277)
chr2 (149-260)||(11985432-11985543)
chr2 (18-77)||(38445137-38445196)
chr2 (16-74)||(4099077-4099135)
chr2 (18-76)||(4778725-4778783)
chr2 (18-76)||(27097476-27097534)
chr2 (173-255)||(31128974-31129056)
chr2 (16-77)||(35220296-35220357)
chr2 (162-242)||(37876813-37876893)
chr2 (18-77)||(5427938-5427997)
chr2 (18-77)||(9169328-9169387)
chr2 (18-77)||(18763439-18763498)
chr2 (18-77)||(37876676-37876735)
chr2 (18-77)||(43397189-43397248)
chr2 (170-260)||(29279794-29279883)
chr2 (18-76)||(31210677-31210735)
chr2 (16-77)||(4041662-4041723)
chr2 (16-77)||(4904213-4904274)
chr2 (24-77)||(10237299-10237352)
chr2 (16-77)||(11985298-11985359)
chr2 (18-74)||(31788431-31788487)
chr2 (18-77)||(1415528-1415587)
chr2 (18-77)||(19062422-19062481)
chr2 (18-77)||(33923676-33923735)
chr2 (200-259)||(42698928-42698987)
chr2 (168-254)||(41694407-41694493)
chr2 (24-77)||(12647999-12648052)
chr2 (162-247)||(24461238-24461323)
chr2 (172-255)||(8809073-8809156)
chr2 (18-77)||(19028984-19029043)
chr2 (34-77)||(29173805-29173848)
chr2 (30-77)||(29574713-29574760)
chr2 (30-77)||(32448703-32448750)
chr2 (181-255)||(36691657-36691732)
chr2 (18-77)||(36691845-36691904)
chr2 (18-77)||(39310922-39310981)
chr2 (169-255)||(4904358-4904444)
chr2 (225-267)||(23933869-23933911)
chr2 (16-74)||(30400103-30400161)
chr2 (169-255)||(32448843-32448929)
chr2 (172-218)||(36175666-36175712)
chr2 (149-231)||(38444982-38445063)
chr2 (24-77)||(6358952-6359005)
chr2 (32-77)||(10929632-10929677)
chr2 (171-255)||(28871987-28872069)
chr2 (16-77)||(42698769-42698829)
chr2 (30-74)||(34128769-34128813)
chr2 (18-77)||(36323840-36323899)
chr2 (172-255)||(37416493-37416576)
chr2 (19-77)||(31128851-31128909)
chr2 (24-77)||(3308909-3308962)
chr2 (162-255)||(18107951-18108044)
chr2 (171-260)||(25509291-25509379)
chr2 (200-248)||(4042230-4042278)
chr2 (25-73)||(17249226-17249274)
chr2 (18-50)||(18107817-18107849)
chr2 (33-77)||(29279655-29279699)
chr2 (24-76)||(34335780-34335831)
[»] scaffold0127 (2 HSPs)
scaffold0127 (149-267)||(15261-15379)
scaffold0127 (23-77)||(15452-15506)
[»] chr7 (63 HSPs)
chr7 (149-255)||(19404956-19405062)
chr7 (162-255)||(42978391-42978484)
chr7 (162-260)||(9450352-9450450)
chr7 (169-254)||(12141530-12141615)
chr7 (149-260)||(8013667-8013778)
chr7 (16-78)||(19404824-19404886)
chr7 (149-247)||(37837660-37837758)
chr7 (149-262)||(30757021-30757134)
chr7 (169-254)||(48061206-48061291)
chr7 (18-77)||(8001615-8001674)
chr7 (18-77)||(19296833-19296892)
chr7 (18-77)||(30756888-30756947)
chr7 (18-77)||(34899676-34899735)
chr7 (18-77)||(42978573-42978632)
chr7 (18-77)||(48316881-48316940)
chr7 (16-77)||(47590274-47590335)
chr7 (149-255)||(34899809-34899912)
chr7 (17-77)||(39171658-39171718)
chr7 (149-249)||(48317014-48317114)
chr7 (169-260)||(4529857-4529948)
chr7 (18-77)||(9450206-9450265)
chr7 (149-260)||(19296656-19296767)
chr7 (149-260)||(39171794-39171905)
chr7 (18-77)||(39328859-39328918)
chr7 (172-267)||(47590085-47590180)
chr7 (149-267)||(13797133-13797251)
chr7 (16-77)||(37837525-37837586)
chr7 (171-267)||(39329017-39329113)
chr7 (18-77)||(12141377-12141436)
chr7 (7-77)||(26623848-26623918)
chr7 (16-77)||(48061385-48061446)
chr7 (18-77)||(24770209-24770268)
chr7 (169-264)||(25287403-25287498)
chr7 (30-77)||(40993145-40993192)
chr7 (18-77)||(45349868-45349927)
chr7 (162-256)||(5078608-5078702)
chr7 (24-78)||(24350919-24350973)
chr7 (16-74)||(38798747-38798805)
chr7 (24-77)||(28476183-28476236)
chr7 (24-77)||(31235838-31235891)
chr7 (30-77)||(1749235-1749282)
chr7 (18-77)||(9977275-9977334)
chr7 (169-260)||(40992960-40993050)
chr7 (18-64)||(3267281-3267327)
chr7 (23-77)||(24069471-24069525)
chr7 (18-68)||(25255199-25255249)
chr7 (24-77)||(22742900-22742953)
chr7 (32-77)||(35132903-35132948)
chr7 (40-76)||(13797023-13797059)
chr7 (24-76)||(48930730-48930782)
chr7 (172-255)||(3224642-3224725)
chr7 (30-77)||(25287267-25287314)
chr7 (18-77)||(39228978-39229037)
chr7 (200-255)||(45350445-45350500)
chr7 (31-77)||(3394434-3394480)
chr7 (171-241)||(9915941-9916011)
chr7 (171-241)||(9923853-9923923)
chr7 (226-267)||(24350695-24350737)
chr7 (24-77)||(1485303-1485356)
chr7 (24-77)||(6001999-6002052)
chr7 (173-238)||(24770055-24770120)
chr7 (29-74)||(27997054-27997099)
chr7 (162-218)||(22087137-22087193)
[»] scaffold0884 (2 HSPs)
scaffold0884 (149-254)||(2174-2279)
scaffold0884 (18-77)||(2042-2101)
[»] scaffold0026 (2 HSPs)
scaffold0026 (162-267)||(72079-72184)
scaffold0026 (18-77)||(71933-71992)
[»] scaffold0445 (2 HSPs)
scaffold0445 (162-260)||(1120-1218)
scaffold0445 (18-77)||(1305-1364)
[»] scaffold0219 (1 HSPs)
scaffold0219 (162-250)||(15053-15141)
[»] scaffold0017 (2 HSPs)
scaffold0017 (18-77)||(32816-32875)
scaffold0017 (169-260)||(32970-33061)
[»] scaffold0088 (2 HSPs)
scaffold0088 (149-267)||(50555-50673)
scaffold0088 (43-77)||(50747-50781)
[»] scaffold0262 (1 HSPs)
scaffold0262 (171-251)||(2041-2121)
[»] scaffold0064 (1 HSPs)
scaffold0064 (172-260)||(19261-19348)
[»] scaffold0634 (1 HSPs)
scaffold0634 (18-77)||(8473-8532)
[»] scaffold0136 (1 HSPs)
scaffold0136 (18-77)||(10111-10170)
[»] scaffold0009 (2 HSPs)
scaffold0009 (169-255)||(58301-58387)
scaffold0009 (37-77)||(58167-58207)
[»] scaffold0603 (1 HSPs)
scaffold0603 (162-254)||(7500-7591)
[»] scaffold0554 (1 HSPs)
scaffold0554 (173-243)||(10672-10742)
[»] scaffold0087 (1 HSPs)
scaffold0087 (169-267)||(25551-25649)
[»] scaffold0888 (1 HSPs)
scaffold0888 (32-77)||(1768-1813)
[»] scaffold0492 (1 HSPs)
scaffold0492 (162-231)||(12721-12790)
[»] scaffold0050 (1 HSPs)
scaffold0050 (16-77)||(66109-66170)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-74)||(71369-71425)
[»] scaffold0128 (1 HSPs)
scaffold0128 (18-77)||(36791-36850)
[»] scaffold0039 (1 HSPs)
scaffold0039 (24-76)||(93065-93117)


Alignment Details
Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 15435074 - 15435199
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15435074 tgtagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaatgaagaagaaagaaggttttgagagaagttggagtttctctcaa 15435173  T
Q  249 taaaaaattaggaccggctcaagatt 274  Q
    ||||||| |||  |||||||||||||    
T  15435174 taaaaaactagagccggctcaagatt 15435199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 34878486 - 34878592
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  34878486 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 34878585  T
Q  262 ccggctc 268  Q
    |||||||    
T  34878586 ccggctc 34878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 35484600 - 35484698
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||||||||||||| |||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  35484600 tcaaaaaatgacctacaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagggccggct 35484698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 31984057 - 31983965
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||| ||||||||||||||||||||||  ||||||||||||  ||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  31984057 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaacaaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaa 31983965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 10776675 - 10776768
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||| |||||||||| | |||| |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  10776675 ttctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctccctaaaaaa 10776768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 7337865 - 7337983
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||||||||||||||||| || |||||  |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||| ||||    
T  7337865 tgtagaggggtgattctagatcaaaaaatgacatagaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctttcac 7337964  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  7337965 tagaaaactagggccggct 7337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 7836981 - 7837059
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtt 240  Q
    ||||||||||||||||||||||||||||| | |||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  7836981 ttctagatcaaaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaaggtttagagagaagttggagtt 7837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 14872509 - 14872423
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||||||||| |||||||||||| || ||||||||||| |||||||| |||  || ||||||||||||||||||||||||||||    
T  14872509 tcaaaaaatgaccgaaaaccacaccttctcgatgaatgaagaagaaagaaagttcagaaagaagttggagtttctctcactaaaaaa 14872423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 15434942 - 15435004
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcact 78  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15434942 caaaatcaaacgccgcacaagacaacgaacaacagaacgccgcacttagacgacgaaatcact 15435004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 45415449 - 45415343
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||| ||| || |||| |||||||| ||||  |||||||||| ||||||||||||    
T  45415449 tgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaacgaagaagaaagaaagtttaaagagaagttgaagtttctctcac 45415350  T
Q  249 taaaaaa 255  Q
    || ||||    
T  45415349 tagaaaa 45415343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 5983859 - 5983800
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  5983859 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 5983800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 29738838 - 29738941
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| | ||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| |||||| ||||||||||||||| |    
T  29738838 tgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagatgttggagtttctctctc 29738937  T
Q  249 taaa 252  Q
    ||||    
T  29738938 taaa 29738941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 45415581 - 45415522
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45415581 aaatcaaacgatgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 45415522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 18939199 - 18939109
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 252  Q
    |||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||   || |||||||| || ||||||||||||||||    
T  18939199 ttctagatcaaaaaatgacctaaaaccacctctcctcgattaatgaaggagaaagaaaacttagagagaaggtgaagtttctctcactaaa 18939109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 41177047 - 41176977
Alignment:
Q  174 aaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 244  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  41177047 aaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 41176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 3228138 - 3228049
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||  ||| | ||||||||||||||| ||| |||| |||| ||||    
T  3228138 aaaaaatgacctaaaaccacccctccttgatgaatgaaggagaaataaaatttagggagaagttggagtttttctaactagaaaactagg 3228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 21686898 - 21686837
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  21686898 caaaatcaaacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcac 21686837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 1742304 - 1742245
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  1742304 aaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 1742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7337732 - 7337791
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7337732 aaatcaaacgttgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcac 7337791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 1742158 - 1742048
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| ||||||||||||||||||||||   ||||||||||| ||| ||||||| | |||| || ||||||| ||||||||||||||| |||| || |     
T  1742158 ttctaggtcaaaaaatgacctaaaaccaccattccttgatgaacgaaagagaaaggaagtttagaaagaagtttgagtttctctcactagaaaactaagg 1742059  T
Q  262 ccggctcaaga 272  Q
    |||||| ||||    
T  1742058 ccggctgaaga 1742048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 35462111 - 35462165
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  35462111 aaacgctgcacaagacgacgaacaacacaacgccgcacttacacgacgaaatcac 35462165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 44915515 - 44915425
Alignment:
Q  170 caaaaaatgacctaaaacca-cacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 259  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||||||| |||| ||||||||||| | ||| |||||||| ||||||||    
T  44915515 caaaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaagtttagagagaagttgaaatttttctcactagaaaattag 44915425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 5983713 - 5983621
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||| ||||||||||| |||||||||  |||||| |||||| |||||||||| || |||| ||||||||||  |||||||||| |||||||    
T  5983713 ttctaggtcaaaaaatgatctaaaaccatccctcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctctctaaaaa 5983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 21686750 - 21686654
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 258  Q
    ||||||||||||||||||||||||| ||   ||||| |||||| ||| |||||||||  ||| || | |||||| ||||||||||||||||||||||    
T  21686750 ttctagatcaaaaaatgacctaaaatcatctctcctcgatgaacgaaagagaaagaaaatttagaaaaaagttgcagtttctctcactaaaaaatta 21686654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 26535260 - 26535184
Alignment:
Q  179 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||| | ||||||||||| |||||||| |||| |||| |||||||||| ||||||||||||||| ||||    
T  26535260 acctaaaaccactcatccttgatgaacgaaggagagagaaagtttagagagaagttagagtttctctcactagaaaa 26535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 51916874 - 51916970
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 265  Q
    |||||||||  ||||||||||| ||||||  ||||| ||||||||||||| |||| |||| || ||| ||||||||||||||||||| |||| ||||    
T  51916874 tcaaaaaatagcctaaaaccacccctcctctatgaacgaaggagaaagaaagtttagagaaaaattgaagtttctctcactaaaaaactagggccgg 51916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7836865 - 7836924
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7836865 aaatcaaacgtcgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcac 7836924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 8211980 - 8212038
Alignment:
Q  19 aatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  8211980 aatcaaacgccgcacaagacgatgaacaacacaacgccgcatttagacgacgaaatcac 8212038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10776531 - 10776589
Alignment:
Q  19 aatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  10776531 aatcaaacgccgcataagacgacgaacaacacaacgccgcacttagacgactaaatcac 10776589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 49626780 - 49626694
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||||||||| |||||| ||||| |||| ||||| |||   || |||||||||||||||||||||||| ||||||    
T  49626780 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaaggaacacttagagagaagttggagtttctctcacaaaaaaa 49626694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 39888215 - 39888159
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||    
T  39888215 aaatcaaacgctgcagaagacgaagaacaccacaacgccgcacttagacgacgaaat 39888159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 11462517 - 11462576
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| || |||| ||||||| |||||||||||    
T  11462517 aaatcaaacgccgcacaagacgacgaacaacaaaatgccggacttagatgacgaaatcac 11462576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 14872663 - 14872604
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| || ||||||||| |||||| |||||||    
T  14872663 aaatcaaacgccgcacaagacgacgaacaacacaatgccgcacttggacgacaaaatcac 14872604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 15836215 - 15836156
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||||||||| || | | |||||||||||| |||||||    
T  15836215 aaatcaaacgctgcacaagacgacgaacaacacaatgtcacacttagacgacaaaatcac 15836156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 32679321 - 32679412
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||| ||||||||| |||||| || || |||| |||||||||   || |||| |||||||| ||||||||||||||||| ||||    
T  32679321 tcaaaaaatgacataaaaccacccctcctcgacgagtgaaagagaaagaaaacttagagaaaagttggaatttctctcactaaaaaactagg 32679412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 35484472 - 35484515
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  35484472 gcacaagacgacgaacaacacaacgccgcacttagacgacgaaa 35484515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 15836070 - 15836001
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 231  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  15836070 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 15836001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 16161848 - 16161795
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  16161848 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 16161795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 27456397 - 27456324
Alignment:
Q  182 taaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||||  |||||| || ||||||||||||||||| |||| || |||||||| ||||| |||||||||||||    
T  27456397 taaaaccatccctcctcgacgaatgaaggagaaagaaagtttagaaagaagttgaagtttttctcactaaaaaa 27456324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 32394869 - 32394820
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  32394869 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaa 32394820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 45789442 - 45789349
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| |||||||||||||||||||||    |||| ||||||||||| ||||| ||  ||| |||||||  | ||||||||||||||||||||    
T  45789442 ttctaggtcaaaaaatgacctaaaaccatcaatcctcgatgaatgaagtagaaataaaatttagagagaacgtagagtttctctcactaaaaaa 45789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 11462663 - 11462747
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 246  Q
    |||||| ||||||||| |||||||| ||| |||| |  ||||| ||||||||||||| |||| ||||||| ||| ||||||||||    
T  11462663 ttctaggtcaaaaaataacctaaaatcacccctcgtcaatgaacgaaggagaaagaaagtttagagagaaattgaagtttctctc 11462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 35462262 - 35462346
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||| | | ||  || || ||||||||||||| |||| |||| ||||| ||||||||| ||||||||||    
T  35462262 aaaaaatgacctaaaaccacccattctcaataaacgaaggagaaagaaagtttagagataagttagagtttctcccactaaaaaa 35462346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 940386 - 940327
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  |||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  940386 aaatcaaacgtcgcacaagacgacaaacaacacaacaccgcacttagacgacggaatcac 940327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 12635033 - 12634946
Alignment:
Q  173 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||| |||| || || |||| |||||| ||    | |||||||||| |||||||||||||||||||| ||||    
T  12635033 aaaatgacctaaaaccacacatcctcgacgagtgaaagagaaaaaaaacatagagagaagtttgagtttctctcactaaaaaactagg 12634946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 32395021 - 32394962
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| |||||||||||| || ||||| ||||||||||||  |||||||||||||    
T  32395021 aaatcaaacgttgcacaagacgatgagcaacacaacgccgcacttgaacgacgaaatcac 32394962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34878347 - 34878406
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| | |||||||||||||||||||| ||||||| ||||| |||||||| ||||    
T  34878347 aaatcaaacaccgcacaagacgacgaacaacacaacgccgtacttaaacgacgaagtcac 34878406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 8212128 - 8212178
Alignment:
Q  165 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaa 215  Q
    ||||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  8212128 tagatcaaaaaataatctaaaagcacccctccttgatgaatgaaggagaaa 8212178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 19060917 - 19060871
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||    
T  19060917 cacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcac 19060871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 44543143 - 44543057
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| ||| |||||||| ||| | |||| ||||| |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  44543143 tcaaagaataacctaaaagcacccttcctcgatgagtgaaagagaaggaaaacttagagagaagttggagtttctctcactaaaaaa 44543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 4413168 - 4413091
Alignment:
Q  175 aatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 252  Q
    ||||||||||||| || |||||| ||| || |||| |||||||| |||| |||| ||||| ||||||||||| |||||    
T  4413168 aatgacctaaaactactcctcctcgataaacgaagaagaaagaaagtttagagaaaagttagagtttctctctctaaa 4413091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 9341741 - 9341688
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| ||| |  |||| |||||||||||||||    
T  9341741 aacgctgcacaagacgacgaacaacataacactccactcagacgacgaaatcac 9341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 47132917 - 47132864
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  47132917 aacgccgcacaaaacgacgaacaacacaacgccccactcagacgacgaaatcac 47132864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 49626928 - 49626875
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| || | ||||| ||||||||||||||||    
T  49626928 aacgccgcacaagacgacgaacaacacaaggtcgcacatagacgacgaaatcac 49626875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 940233 - 940149
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||| ||||||||| | |||| ||||||  || |||||||||  ||| ||||||| || |||||| |||||||||||||    
T  940233 aaaaaatgacttaaaaccactcatcctcgatgaagaaaagagaaagaaaatttagagagaatttagagtttttctcactaaaaaa 940149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 32679174 - 32679226
Alignment:
Q  25 acgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  32679174 acgccgcacaagatgacgaacaacacaacgccgcactcagacgatgaaatcac 32679226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 50377332 - 50377292
Alignment:
Q  37 acgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  50377332 acgacgaacaacacaacgccgtacttagacgacgaaatcac 50377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 21947687 - 21947746
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |  | ||||||||||||||| | ||| |||||||||||||||||||||    
T  21947687 aaatcaaacgccgtccgagacgacgaacaacacagcgctgcacttagacgacgaaatcac 21947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 21947843 - 21947925
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| |||||||||||| | |||| |||||| |||| |||||||| |||| |||| || ||| |||||||||||||| ||||    
T  21947843 aaaaataacctaaaaccacccatcctcgatgaacgaag-agaaagaaagtttagagaaaaattgaagtttctctcactagaaaa 21947925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 23291711 - 23291770
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||||||||  | |||||||| ||||||| |||||||||||||||||||    
T  23291711 aaatcaaacgtcgcacaagataatgaacaacacaacgccgtacttagacgacgaaatcac 23291770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 6218042 - 6218140
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||||||| |||||| ||   ||||||||||| | || || |||||   ||  ||||||||||||| |||| |||||||||||||||||    
T  6218042 ttctaggtcaaaaaatgaactaaaatcatctctccttgatgagttaatgaaaaagataattaagagagaagttggaatttccctcactaaaaaattagg 6218140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 13144881 - 13144939
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||||||| | |||||||||| ||  |||||| ||||||||| ||||||||||||||||    
T  13144881 aaatcaaatgttgcacaagacaacagacaacacaacgccgcatttagacgacgaaatca 13144939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 31984176 - 31984142
Alignment:
Q  43 aacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||| |||||||||||||||||||||||||||    
T  31984176 aacaacacaacgccgcacttagacgacgaaatcac 31984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 3871443 - 3871390
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | | || |||||||| || ||||||||    
T  3871443 aacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 3871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 27580195 - 27580256
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||  ||| | ||||||||||||| ||||||||| ||| |||||||||||||    
T  27580195 caaaatcaaatgccacacgatacgacgaacaacacaacgccgcatttaaacgacgaaatcac 27580256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 34413172 - 34413225
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| || | |||||| ||||||| |||||||    
T  34413172 aacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacaaaatcac 34413225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 41994441 - 41994388
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||  ||||||||    
T  41994441 aacgctgcacaagacgatgaacaacacaacgccgcattcagacgttgaaatcac 41994388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 44543287 - 44543234
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||| || ||||||||||||| || | ||||||||||||||||||||||    
T  44543287 aacgccgcataatacgacgaacaacacaaagtcgcacttagacgacgaaatcac 44543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 12635184 - 12635148
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcac 60  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  12635184 aacgccgcacaagacgacgaacaacacaacgccgcac 12635148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 31692685 - 31692733
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaaga 217  Q
    |||||||||||||||||| ||||| |||| ||||| |||| ||||||||    
T  31692685 tcaaaaaatgacctaaaatcacacatcctcgatgagtgaaagagaaaga 31692733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 34413306 - 34413402
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 258  Q
    |||||||| ||||| |||||||||| ||| ||| || ||| | |||| |||||| ||   || ||||||||   |||||||||||||||||||||||    
T  34413306 ttctagataaaaaattgacctaaaatcacccctactcgataagtgaaagagaaaaaaaacttagagagaaggcagagtttctctcactaaaaaatta 34413402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 34528735 - 34528695
Alignment:
Q  33 caagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    ||||||||||||||||| || ||||||||||||||| ||||    
T  34528735 caagacgacgaacaacacaatgccgcacttagacgatgaaa 34528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 47132726 - 47132694
Alignment:
Q  228 agaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||||||||||| ||||    
T  47132726 agaagttggagtttctctcactaaaaaactagg 47132694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 50377204 - 50377149
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||| |||||||||||||||||||||  |||| | |||||| |||||||||||||    
T  50377204 ttctaggtcaaaaaatgacctaaaacca-tcctcttcgatgaacgaaggagaaagaa 50377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 45568659 - 45568757
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  45568659 ttctagatcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 45568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 10232957 - 10232846
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  10232957 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 10232858  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  10232857 tagaaaactagg 10232846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 40487199 - 40487101
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  40487199 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaattagg 40487101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 47896038 - 47895927
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||| ||| |||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  47896038 tgtagaggggtgattctaggtcaaaaaatgatctataaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 47895939  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  47895938 tagaaaactagg 47895927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 9998331 - 9998242
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  9998331 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 9998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 40556585 - 40556480
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||| |||| || ||||||||||||||||| ||||| |||| ||||     
T  40556585 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagtttctcccactagaaaactaggg 40556486  T
Q  262 ccggct 267  Q
    ||||||    
T  40556485 ccggct 40556480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 21431489 - 21431401
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  21431489 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 21431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 12050850 - 12050953
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||| |||||||||| || ||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||||||||||| |    
T  12050850 tgtagaggggtgattctaaatcaaaaaataacttaaaaccacacatccttgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctc 12050949  T
Q  249 taaa 252  Q
    ||||    
T  12050950 taaa 12050953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 48650957 - 48651048
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| ||||||||||||||||||| |||||| |||| ||||    
T  48650957 tcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttggagtttctttcactagaaaactagg 48651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 38545709 - 38545616
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||||||||||||||  |||||  ||||| ||||||||||||| |||| ||||||||||| |||||||||||||| ||||    
T  38545709 ttctaggtcaaaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaa 38545616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 47042276 - 47042365
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||| |||||| |||||| |||||| ||| || |||| ||||||||||||||||||| |||||| |||||||||    
T  47042276 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggataaataaagtttagagagaagttggagtttctttcactagaaaattagg 47042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 32701385 - 32701269
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| || ||| |||||| ||||||||||||| ||||  ||||||||||||||||||  |||    
T  32701385 tgtagagggatgattctaggtcaaaaaatgacctaaaaccaccccacctcgatgaacgaaggagaaagaaagtttaaagagaagttggagtttcttccac 32701286  T
Q  249 taaaaaattaggaccgg 265  Q
    || |||| |||| ||||    
T  32701285 tagaaaactagggccgg 32701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 35865158 - 35865246
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||    
T  35865158 aaaaatgacctaaaaccacccctcctcgaggaacgaaggagaaagaaagtttagagagaagttgaagtttctctcactagaaaactagg 35865246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 9998486 - 9998427
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  9998486 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 9998427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 10108101 - 10108014
Alignment:
Q  173 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10108101 aaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10108255 - 10108196
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  10108255 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 10108196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10233089 - 10233030
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  10233089 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 10233030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 36461500 - 36461559
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  36461500 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 36461559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 40556731 - 40556672
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40556731 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 40556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 6954898 - 6955016
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||| ||| ||||||   |||| ||||||||||||| |||| |||||||||||||||||||  |||    
T  6954898 tgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaacgaaggagaaagaaagtttagagagaagttggagtttcttccac 6954997  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  6954998 tagaaaactagggccggct 6955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 10229339 - 10229250
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  10229339 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 10229250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 43488849 - 43488917
Alignment:
Q  199 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||    
T  43488849 gatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcactaaaaaactagggccggct 43488917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 6954765 - 6954824
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  6954765 aaatcaaacgccgcacaagacgacgaacaatacaacgccgcacttagacgacgaaatcac 6954824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 12050717 - 12050776
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  12050717 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcgcttagacgacgaaatcac 12050776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 43488659 - 43488718
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  43488659 aaatcaaacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcac 43488718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 45568514 - 45568573
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  45568514 aaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 45568573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 7449124 - 7449217
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 263  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7449124 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7449217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 7457266 - 7457359
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggacc 263  Q
    |||||||||||||||||||||  ||||||| ||||| ||| |||||| || |||| ||||||||||||||||||||||| || |||| |||||||    
T  7457266 tcaaaaaatgacctaaaaccagccctccttaatgaacgaaagagaaaaaaagttt-gagagaagttggagtttctctcattagaaaactaggacc 7457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 33579755 - 33579649
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||| ||||||||| | || | |||||| |||||| |||||| |||| ||||||||||| ||||||||||||    
T  33579755 tgtagaggggtgattctaggtcaaaaaatgacttaaaaccacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctcac 33579656  T
Q  249 taaaaaa 255  Q
    || ||||    
T  33579655 tagaaaa 33579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 36461653 - 36461751
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||||||||||||||||| | |||| |||||| ||||||||||||| |||| |||||||  || |||||||| ||||| |||| |||| ||||||    
T  36461653 tcaaaaaatgacctaaaaccactcatcctcgatgaacgaaggagaaagaaagtttagagagaatatgaagtttctcacactagaaaactagggccggct 36461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 40487339 - 40487285
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40487339 aaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 40487285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 9797732 - 9797830
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  |||    ||||| |||||||||| || |||| ||||||||||||||||||||||||    
T  9797732 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctca---atgaacgaaggagaaataaagtttagagagaagttggagtttctctcac 9797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10229495 - 10229436
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  10229495 aaatcaaacgccgcacaagatgacgaacaacacaacgccgcacttagaagacgaaatcac 10229436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 12149853 - 12149912
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||    
T  12149853 aaatcaaacgctgcacaagacgatgaacaatacaacgccgcacttagatgacgaaatcac 12149912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 21534012 - 21534116
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||  ||||||||||||| | |||| ||| || ||||||||||||| |||| ||||||| || |||||||||||||    
T  21534012 tgtagaggggtgattctaggtcaaaaa--gacctaaaaccacccatcctcgattaacgaaggagaaagaaagtttagagagaaattagagtttctctcac 21534109  T
Q  249 taaaaaa 255  Q
    |||||||    
T  21534110 taaaaaa 21534116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 31272021 - 31272120
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| | ||||||| |||||||| |||||| |||| |||||| |||||| ||||||   || |||||||||||||||||||||||||| |||||||||    
T  31272021 ttctaggttaaaaaataacctaaaatcacaccctcctcgatgaacgaaggaaaaagaaaacttagagagaagttggagtttctctcactagaaaattagg 31272120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38545818 - 38545759
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||    
T  38545818 aaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 38545759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 38860189 - 38860248
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  38860189 aaatcaatcgccgcacaagacgacgaacaacaaaacgtcgcacttagacgacgaaatcac 38860248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 47042118 - 47042177
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||    
T  47042118 aaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 47042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20608966 - 20609027
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| || |||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  20608966 caaaatcaaatgccgcacaagacgactaacaacacaacgccgcaattagacgacgaaatcac 20609027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 35864999 - 35865060
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||  ||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  35864999 caaaatcaaacgccacacaagacgactaacaacacaacgccgcaattagacgacgaaatcac 35865060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 44960019 - 44960080
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||||||||||| || | ||| |||||||||||||||||||||||    
T  44960019 caaaatcaaacgccgcacaagacgacgaataatacaacaccgcacttagacgacgaaatcac 44960080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 50194505 - 50194606
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 268  Q
    ||||||||||| |||||||||| ||| || || || |||| ||||| |||   || ||||||||||||||||||||||||||||||| ||||  ||||||    
T  50194505 tcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaagttggagtttctctcactaaaaaactagggtcggctc 50194604  T
Q  269 aa 270  Q
    ||    
T  50194605 aa 50194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 52923340 - 52923428
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||| |||||| ||  |||||  ||||| ||||||||||||| |||| |||||||||||||||||||  |||||||||| ||||    
T  52923340 aaaaatgacttaaaactacctctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactaaaaaaatagg 52923428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 23799979 - 23800038
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||| || |||| ||||||||| |||||||||||||||||    
T  23799979 aaatcaaacgccgcacaagacgactaagaacacaacgccgcaattagacgacgaaatcac 23800038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 36910710 - 36910757
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttaga 65  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  36910710 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttaga 36910757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 43016714 - 43016631
Alignment:
Q  177 tgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||| | |||| |||||| ||| |||||||||  ||| |||||||||| ||||||||||||||| |||| ||||    
T  43016714 tgacctaaaaccacccttcctcgatgaacgaaagagaaagaaaatttagagagaagttagagtttctctcactagaaaactagg 43016631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 47896171 - 47896112
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||| ||||||||||||||    
T  47896171 aaatcaaacgccgcacaagacaacgaacaacacaacgccacactttgacgacgaaatcac 47896112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 629128 - 629214
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||||||||| |||||| ||||| |||| | ||| |||   || |||||||||| ||||||||||||||||||||    
T  629128 tcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaacttagagagaagttagagtttctctcactaaaaaa 629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 21431639 - 21431585
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||||||||||||||||||| || |||||||||||||| |||||||||    
T  21431639 aaacgccgcacaagacgacgaacaacacaatgccgcacttagacggcgaaatcac 21431585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 7546620 - 7546567
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  7546620 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 7546567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 9797601 - 9797657
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||||||||||||     |||||||||||||||||||||||||||    
T  9797601 caaaatcaaacgccgcacaagacgacgaac-----aacgccgcacttagacgacgaaatcac 9797657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20465037 - 20465098
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| | |||||||||||||||||| ||| || ||||||||||| ||||||||    
T  20465037 caaaatcaaacgccgtacaagacgacgaacaacacaacacctcacttagacgatgaaatcac 20465098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 33579901 - 33579852
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttaga 65  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  33579901 caaaatcaaacgatgcacaagacgacgaacaacacaacgctgcacttaga 33579852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 43016876 - 43016815
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||  |||||||  |||||||||| |||||||||||| ||||||||||||||    
T  43016876 caaaatcaaacgccacacaagataacgaacaacacaacgccgcacttggacgacgaaatcac 43016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 52923186 - 52923243
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatc 75  Q
    ||||||||||| |||||||||||||||||||| | |||| |||||||||||| |||||    
T  52923186 aaatcaaacgccgcacaagacgacgaacaacacagcgccacacttagacgacaaaatc 52923243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 953631 - 953715
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| |||||||||||||  |||||  |||||||||||||||||||   || |||||||  ||||||||||||||||| ||||    
T  953631 aaaaaaagacctaaaaccacttctcctcaatgaatgaaggagaaagaaaacttagagagaatgtggagtttctctcactataaaa 953715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 9320078 - 9320018
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||||  |||||||||||||||||||| || |||||| |||||| |||||||||    
T  9320078 caaaatcaaacgtcgcacaagacgacgaacaacacaatgccgcatttagacaacgaaatca 9320018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 20988028 - 20988075
Alignment:
Q  220 gttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  20988028 gtttagagagaagttggagtttctctcactaaaaaactagggccggct 20988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 21533882 - 21533937
Alignment:
Q  22 caaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||| | |||||||||||||||||| |||||||||| ||||| ||||||||||    
T  21533882 caaacgccgtacaagacgacgaacaacacaacgccgcacatagacaacgaaatcac 21533937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 26276015 - 26276094
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| ||||||||||||  |||||  |||||| |||||||||||| ||||  |||||| || |||||||||||||    
T  26276015 tcaaaaaattacctaaaaccacctctcctcaatgaataaaggagaaagaaagtttacagagaaattagagtttctctcac 26276094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 29239347 - 29239300
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  29239347 gcacaagacgacgaacaacacaacgccgcactcagacgatgaaatcac 29239300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 31271876 - 31271935
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||||||||||| ||  |||||||||||||| ||||||||    
T  31271876 aaatcaaatgccgcacaagacgacgaacaacacaaaaccgcacttagacgaagaaatcac 31271935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 48650803 - 48650862
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || ||||||||| |||||||||| || |||||||||||||||| |||||||    
T  48650803 aaatcaaatgccgcacaagacaacgaacaacacaatgccgcacttagacgacaaaatcac 48650862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 20465192 - 20465238
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  20465192 aaaaatgacataaaaccacccctacttgatgaatgaaggagaaagaa 20465238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 54148855 - 54148793
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 231  Q
    |||||||||||||||||||||| |||||| |||  | ||||||||||||| |||| |||||||    
T  54148855 tcaaaaaatgacctaaaaccacccctcctcgattgacgaaggagaaagaaagtttagagagaa 54148793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 54148993 - 54148951
Alignment:
Q  35 agacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  54148993 agacgacgaacaacacaatgccgcacttagacgacgaaatcac 54148951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 9688488 - 9688541
Alignment:
Q  201 tgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    ||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||||    
T  9688488 tgaatgaagaagaaagaaaatttagagagaagttgaagtttctctcactaaaaa 9688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 12947352 - 12947405
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| || |||||||| | |||||||||||||    
T  12947352 aacgccgcacaagacgacgaacaacacaaagccgcactcaaacgacgaaatcac 12947405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 27706308 - 27706361
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| | |||| |||||||||||||||    
T  27706308 aacgccgcacaagacgacgaacaacacaacgtcacactaagacgacgaaatcac 27706361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 53508227 - 53508182
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  53508227 acaagacgacgaacaacacaacgccgcattcagacgacgaaatcac 53508182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 29921920 - 29921820
Alignment:
Q  169 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 266  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29921920 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29921821  T
Q  267 t 267  Q
    |    
T  29921820 t 29921820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 29971073 - 29970973
Alignment:
Q  169 tcaaaaaatgacct-aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact-aaaaaattaggaccggc 266  Q
    |||||||||||||| |||||||| |||||| || ||||||| |||||||||   || |||||||| | |||| ||||| ||| |||||| ||||||||||    
T  29971073 tcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaaggtagagtatctcttactaaaaaaactaggaccggc 29970974  T
Q  267 t 267  Q
    |    
T  29970973 t 29970973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 32701510 - 32701457
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    ||||||||||| ||||||||||||  |||| | |||||||||||||||||||||||    
T  32701510 aaatcaaacgccgcacaagacgac--acaatacaacgccgcacttagacgacgaaa 32701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 37040635 - 37040575
Alignment:
Q  183 aaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 243  Q
    |||||||| ||||||||||||| ||| ||||||||| |||| || ||||||| ||||||||    
T  37040635 aaaaccacccctccttgatgaacgaaagagaaagaaagtttagaaagaagtttgagtttct 37040575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 1803246 - 1803281
Alignment:
Q  225 gagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1803246 gagagaagttggagtttctttcactaaaaaattagg 1803281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 4019737 - 4019694
Alignment:
Q  34 aagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||| |||| |||||| |||||||||||||||    
T  4019737 aagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 4019694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 7546484 - 7546397
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 249  Q
    |||||||||||||| |||||||||| ||| |||||| ||||| |||  |||||||||   || |||||||| | || |||||||||||    
T  7546484 ttctagatcaaaaattgacctaaaatcacccctcctcgatgagtgagagagaaagaaaacttagagagaagattgaatttctctcact 7546397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 8914712 - 8914665
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| || | |||||| |||||||||||||||    
T  8914712 gcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcac 8914665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 53099809 - 53099750
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||| ||| ||||||| |||| | || |||||||||||||||||    
T  53099809 aaatcaaacgccgcacaagatgactaacaacacaacgtcacaattagacgacgaaatcac 53099750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 53807945 - 53807988
Alignment:
Q  34 aagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  53807945 aagacgacgaacaacacaaggtcgcacttagacgacgaaatcac 53807988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 21290034 - 21290132
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||| |||||||||| |||  |||||  |||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  21290034 ttctaggtcaaaaattgacctaaaatcacctctcctccatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 21290132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 53808140 - 53808170
Alignment:
Q  225 gagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||||||||||||    
T  53808140 gagagaagttggagtttctctcactaaaaaa 53808170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 3606779 - 3606738
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaa 72  Q
    ||||||||||||||||||| || |||||||| ||||||||||    
T  3606779 cacaagacgacgaacaacacaatgccgcactcagacgacgaa 3606738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 4821674 - 4821625
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||||||||||||||||||| ||| || || ||||||| |||||||||    
T  4821674 tcaaaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaagaa 4821625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 21289896 - 21289949
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||||||| ||||||| || |||| |||||| |||||||||||||||    
T  21289896 aacgccgcacaagacaacgaacaccacaacgtcgcactaagacgacgaaatcac 21289949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 36910934 - 36910975
Alignment:
Q  226 agagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||||||||||||||||||||||| |||| |||| ||||||    
T  36910934 agagaagttggagtttctctcactagaaaactagggccggct 36910975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 51487116 - 51487063
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| | |||| ||| |||||||||||    
T  51487116 aacgccgcacaagacgacgaacaacacaacgtcccactaagatgacgaaatcac 51487063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 51923733 - 51923680
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||| ||||||||||| |||| | |||| |||||||||||||||    
T  51923733 aacgccgcacaagatgacgaacaacacaacgtcacactaagacgacgaaatcac 51923680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 4821810 - 4821766
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||||||||||||||| | ||| |||||||||||||| |||||||    
T  4821810 acaagacgacgaacaatacaacaccgcacttagacgatgaaatca 4821766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 23800131 - 23800230
Alignment:
Q  169 tcaaaaaatgacctaaaacca--cacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaattaggaccgg 265  Q
    ||||||||| |||||||||||  | |||| | ||||||||||||||||| ||  ||| ||||| || ||| |||||||||||||| |||| |||| ||||    
T  23800131 tcaaaaaataacctaaaaccacccccctcttcgatgaatgaaggagaaaaaaaatttagagagaaatttgaagtttctctcactagaaaactagggccgg 23800230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 29239212 - 29239184
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccac 190  Q
    |||||||||||||||||||||||||||||    
T  29239212 ttctagatcaaaaaatgacctaaaaccac 29239184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 29249080 - 29249024
Alignment:
Q  199 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| ||||||||||||||   ||  ||||||||| ||||||||||||||||||||    
T  29249080 gatgagtgaaggagaaagaaaaattaaagagaagttagagtttctctcactaaaaaa 29249024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 46220543 - 46220459
Alignment:
Q  172 aaaaatgacctaaaaccacacc-tccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||||||||||||||| || ||||  || ||| || ||||||||| |||| ||||||||||  ||||||| |||||| ||||    
T  46220543 aaaaatgacctaaaaccaccccttcctcaataaataaaagagaaagaaagtttagagagaagttatagtttctatcactagaaaa 46220459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 31013771 - 31013882
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  31013771 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 31013870  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  31013871 tagaaaactagg 31013882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 10377574 - 10377475
Alignment:
Q  161 gttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  10377574 gttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 10377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 27110680 - 27110770
Alignment:
Q  165 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||||||| | || | |||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  27110680 tagatcaaaaaatgacctaaaaccacccatcttcgatgaatgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaa 27110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 25191279 - 25191372
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| |||||||||||||||||| |||  ||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25191279 ttctaggtcaaaaaatgacctaaaatcacctctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 25191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 17693836 - 17693919
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||| || ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17693836 aaaaatgacctaaaacaacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactaaaaaa 17693919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 8412571 - 8412664
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 264  Q
    |||||||||||||||||||| ||| || |||||| ||| ||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||||    
T  8412571 aaaaaatgacctaaaaccacccctactcgatgaacgaatgagaaagaaagtttagagagaagttagagtttctctcactagaaaactaggaccg 8412664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 45446031 - 45446124
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggac 262  Q
    |||||||||||| |||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||    
T  45446031 tcaaaaaatgacataaaactacccttcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactaggac 45446124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 37971305 - 37971246
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37971305 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 37971246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20553306 - 20553367
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  20553306 caaaatcaaacgccgcataagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 20553367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 37971181 - 37971086
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 247  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||   ||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  37971181 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcctc---gatgaatgaagaagaaagaaaatttagagagaagttggagtttctctca 37971086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7883308 - 7883367
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  7883308 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagatgacgaaatcac 7883367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 23230665 - 23230606
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  23230665 aaatcaaacgccgcacaagacgacgaacaacaaatcgccgcacttagacgacgaaatcac 23230606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 8981066 - 8980980
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||| |||||| || || |||| ||||| |||   || |||||||||||||||||||||||||||||||    
T  8981066 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaacgaaaacttagagagaagttggagtttctctcactaaaaaa 8980980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10377711 - 10377652
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  10377711 aaatcaaacgccgcacaagacggcgaacaacacaacgccgcacttagacaacgaaatcac 10377652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 23230512 - 23230430
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 252  Q
    ||||||| ||||||||||| || | |||| |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||    
T  23230512 tcaaaaattgacctaaaac-acccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaa 23230430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 28086880 - 28086939
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  28086880 aaatcaaatgctgcacaagatgacgaacaacacaacgcagcacttagacgacgaaatcac 28086939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 15344192 - 15344090
Alignment:
Q  152 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 251  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15344192 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15344093  T
Q  252 aaa 254  Q
    |||    
T  15344092 aaa 15344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 15433257 - 15433155
Alignment:
Q  152 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 251  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15433257 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15433158  T
Q  252 aaa 254  Q
    |||    
T  15433157 aaa 15433155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 15524561 - 15524459
Alignment:
Q  152 agagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 251  Q
    |||||| || || ||| ||||| |||||||||||||||| |||||| ||||| |||| |||||  ||   || |||||||||||||||||||||||||||    
T  15524561 agaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctcactaa 15524462  T
Q  252 aaa 254  Q
    |||    
T  15524461 aaa 15524459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 17693679 - 17693740
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||||||    
T  17693679 caaaatcaaacgccgcacaagaagacgaacaatacaacaccgcacttagacgacgaaatcac 17693740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20559809 - 20559870
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| || |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  20559809 caaaatcaaaggccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcac 20559870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20571371 - 20571432
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| || |||||||||||||||||||| ||||  |||||||||||||||||||||    
T  20571371 caaaatcaaaggccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcac 20571432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 3673312 - 3673236
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||||||||||||  |||| | ||||||| |||||||||||| |||| ||||||||||| ||||||| ||||    
T  3673312 aaaaatgacctaaaaccaaccctcttcgatgaataaaggagaaagaaagtttagagagaagttgaagtttctttcac 3673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 8443587 - 8443639
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8443587 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatca 8443639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 3673463 - 3673404
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| | ||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  3673463 aaatcaaacaccgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcac 3673404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7677350 - 7677409
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  7677350 aaatcaaatgcagcacaagacgacgaacaacacaacgccgcaattagacgatgaaatcac 7677409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 7677480 - 7677579
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||| ||||||||  ||| ||||||| || |||||| ||||||    
T  7677480 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaatttagagagaaattagagtttatctcac 7677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 16247290 - 16247349
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  16247290 aaatcaaacgtcgcacaagacgatgaacaacacaacgccgcacttagacgaagaaatcac 16247349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 40211369 - 40211428
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| ||||| |||||||||||||||| |||||| || |||||||||||||||||    
T  40211369 aaatcaaacactgcataagacgacgaacaacacaacgccacatttagacgacgaaatcac 40211428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 20559944 - 20560050
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20559944 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20560043  T
Q  249 taaaaaa 255  Q
    || ||||    
T  20560044 tagaaaa 20560050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 20571506 - 20571612
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| || |||||||| |||||||||| |||| | |||||| |||| ||||| || |||| |||||||||||| ||||||||| |    
T  20571506 tgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctccc 20571605  T
Q  249 taaaaaa 255  Q
    || ||||    
T  20571606 tagaaaa 20571612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 28897584 - 28897494
Alignment:
Q  165 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||| ||||||||| |||||| || |||||||| |||| ||  ||||  | |||||||| ||||||||||| |||||||    
T  28897584 tagatcaaaaaatgacttaaaaccacccctcctcgacgaatgaagaagaacgagagtttaaaaagaagttgaagtttctctcattaaaaaa 28897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 45445878 - 45445936
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||| |||||||||||||||||| | |||| || ||||||||||||||||||    
T  45445878 aaatcaaacgccgcacaagacgacgaacaatacaacgtcgtacttagacgacgaaatca 45445936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 7883463 - 7883544
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 253  Q
    ||||||||||||||||||| | || | |||||| ||| |||||||||  ||| || |||||||| |||||||||||||||||    
T  7883463 aaaaatgacctaaaaccactcatcatcgatgaacgaatgagaaagaaaatttagaaagaagttgaagtttctctcactaaaa 7883544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 20553458 - 20553551
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| || |||||||| |||||||||| |||||| |||||| |||| ||||| || ||||  ||||||||||| ||||||||| ||| ||||    
T  20553458 ttctaggtccaaaaatgatctaaaaccacccctcctcgatgaacgaagaagaaaaaaagtttaaagagaagttggtgtttctctccctagaaaa 20553551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 33214853 - 33214930
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    |||||| ||||||||||||| | |||| |||||| ||||||||||||| |||| ||||||| ||| ||||| ||||||    
T  33214853 aaaaaaagacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaaattgaagtttgtctcac 33214930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 14545123 - 14545215
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac-taaaaaattagg 260  Q
    |||||||||||||||||||||| | ||||| | ||||||||||||||     ||| ||||||||||||||||||||  || ||||||||||||    
T  14545123 tcaaaaaatgacctaaaaccactcatccttaacgaatgaaggagaaattttttttagagagaagttggagtttctcgaacttaaaaaattagg 14545215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 25191134 - 25191190
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||||||| |||||||    
T  25191134 aaatcaaacgccgcacaagacgacgaacaacacaacgctgtacttagacaacgaaat 25191190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 29617677 - 29617769
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    ||||||||||||||||||| ||| ||| | ||| | |||| |||||| ||  ||| ||||||||||| | ||||||||||||||||| |||||    
T  29617677 tcaaaaaatgacctaaaacaacatctcttcgataagtgaaagagaaacaaaatttagagagaagttgaaatttctctcactaaaaaactagga 29617769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 40211528 - 40211612
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||| ||||||| |||| |||||| ||| || |||||||||||||  |||  |||||| |||||||||||||||||| ||||    
T  40211528 aaaaaattacctaaagccacccctcctcgattaacgaaggagaaagaaattttaaagagaaattggagtttctctcactagaaaa 40211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14544970 - 14545029
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||| ||||| | ||||||||| |||||||||||||||||    
T  14544970 aaatcaaacgccacacaagacgactaacaaaacaacgccgcaattagacgacgaaatcac 14545029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 18890785 - 18890832
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  18890785 gcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 18890832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 34609840 - 34609793
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||    
T  34609840 gcacaagacgaggaacaacccaacgccgcacttagacgacgaaatcac 34609793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 40619140 - 40619199
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||   ||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  40619140 aaatcaaacgtcacacaagacgacaaacaacacaacgccgcacttagacgatgaaatcac 40619199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 1236913 - 1236999
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||||||||| ||||||  ||||  ||| ||||| |||   || ||||||||||| |||||||||||||||||||    
T  1236913 tcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaacttagagagaagttgaagtttctctcactaaaaaa 1236999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 8826218 - 8826172
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  8826218 cacaagacgacgaacaacataacgctgcactcagacgacgaaatcac 8826172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 8867705 - 8867603
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    ||||||||||||||||||| ||||| ||| | | || |||| ||||| |||||||||   || |||||||  || ||||||||| ||||||||| |||||    
T  8867705 ttctagatcaaaaaatgacttaaaatcactcatactcgatggatgaaagagaaagaaaacttagagagaatgtgtagtttctctaactaaaaaactagga 8867606  T
Q  262 ccg 264  Q
    |||    
T  8867605 ccg 8867603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 1236772 - 1236825
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||||||| |||||||||| || | ||||||||||||||||||||||    
T  1236772 aacgccgcacaagacaacgaacaacacaaggtcgcacttagacgacgaaatcac 1236825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 1239472 - 1239525
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||||||||| |||||||| || | ||||||||||||||||||||||    
T  1239472 aacgccgcacaagacgatgaacaacacaaggtcgcacttagacgacgaaatcac 1239525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 39657463 - 39657410
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||| | |||| |||||| |||||||||||||||    
T  39657463 aacgccgcacaagacgacgaacaatacaacgtcgcactaagacgacgaaatcac 39657410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 471231 - 471291
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||||  |||| ||||||||||||||| | |||||||||| |||||| ||||||    
T  471231 caaaatcaaacgtcgcaccagacgacgaacaacacagcgccgcacttggacgacaaaatca 471291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 14585715 - 14585663
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||| |||||||||||||||||||| |||| ||| || ||||||||||||||    
T  14585715 aacgccgcacaagacgacgaacaacacaacgtcgcgctaagacgacgaaatca 14585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 24099484 - 24099567
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 256  Q
    |||||||||||||| |||| ||| || ||||| |||| |||||||||    | ||||||||||| ||||||||||||||||||||    
T  24099484 aaaaatgacctaaagccac-cctactcgatgattgaaagagaaagaaaacctagagagaagttgaagtttctctcactaaaaaat 24099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 29937981 - 29937905
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    |||||||| |||||||||| | ||||  ||||| |||| |||||||| ||||  |||||| ||||||||||||||||    
T  29937981 aaaaatgatctaaaaccacccatcctcaatgaacgaagtagaaagaaagtttaaagagaaattggagtttctctcac 29937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 5917714 - 5917757
Alignment:
Q  34 aagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||| |||| |||||| |||||||||||||||    
T  5917714 aagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 5917757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 8443743 - 8443789
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  8443743 aaaaaatgacctaaaaccacccct-cttgatgaatgaaagagaaagaa 8443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 8826084 - 8826033
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggaga 213  Q
    ||||||||||||||||||||||||||||| | |||| ||||| |||| ||||    
T  8826084 ttctagatcaaaaaatgacctaaaaccacccatcctcgatgagtgaaagaga 8826033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 41684300 - 41684221
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 250  Q
    ||||| ||||||||||||||    |||| ||||||||||||||||||| |  |  || ||||||||||||||||||||||    
T  41684300 aaaaactgacctaaaaccacttaccctttatgaatgaaggagaaagaaagcctaaagggaagttggagtttctctcacta 41684221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 27498565 - 27498635
Alignment:
Q  179 acctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 249  Q
    |||||||||| | |||| | |||||||||||||||||||| | ||  ||| |||||| |||||||||||||    
T  27498565 acctaaaaccgcccctcatcgatgaatgaaggagaaagaaagcttaaagataagttgaagtttctctcact 27498635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 36948688 - 36948742
Alignment:
Q  200 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||| |||||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  36948688 atgaataaaggagaaagaaagtttaaagagaagttgaagtttgtctcactaaaaa 36948742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 5333436 - 5333391
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatc 75  Q
    |||||||||||||||||||| ||| ||||||| ||| |||||||||    
T  5333436 gcacaagacgacgaacaacacaacaccgcactcagatgacgaaatc 5333391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 24099343 - 24099384
Alignment:
Q  36 gacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  24099343 gacgacgaacaacacaacgtcgcactcagacgacgaaatcac 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 27498443 - 27498487
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||||||||||||| || | | |||||||||||||||||    
T  27498443 gcacaagacgacgaacaacacaatggcacacttagacgacgaaat 27498487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 41060482 - 41060534
Alignment:
Q  206 gaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 258  Q
    |||||||||||||  ||| |||||| | || ||||||||||||||||||||||    
T  41060482 gaaggagaaagaaattttagagagatgatgaagtttctctcactaaaaaatta 41060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 12170383 - 12170265
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtctagagagaagttggagtttctctcac 12170284  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  12170283 tagaaaactagggccggct 12170265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 33053370 - 33053481
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  33053370 tgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 33053469  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  33053470 tagaaaactagg 33053481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 3913789 - 3913886
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  3913789 ttctaggtcaaaaaatgacctaaaaccac-cctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 3913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 68225 - 68320
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||| |||||||||||  |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||  ||||||||| |||| ||||||    
T  68225 aaaaattacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcctactaaaaaactagggccggct 68320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 33053237 - 33053296
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  33053237 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 33053296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 3913643 - 3913699
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3913643 aaatcaaacgttgcacaagacgacgaacaacacaacgccgcacttagacgacgaaat 3913699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 24227936 - 24228024
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 259  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| || | || |||| ||||||||||||| | || |||||||||||    
T  24227936 aaaaaatgacctaaaaccactcctccttgatgaatgaagaagaaataaagcttggagaaaagttggagtttcgcccattaaaaaattag 24228024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 606077 - 605986
Alignment:
Q  164 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||| |||||||||||| ||||| ||| |||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||| ||||    
T  606077 ctaggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagaaaagttggagtttctcccactagaaaa 605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 606225 - 606166
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  606225 aaatcaaacgccgcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcac 606166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 260
Target Start/End: Original strand, 29255660 - 29255755
Alignment:
Q  165 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||| |||||| |||||||||| ||| | |||||| ||||||||||||  |||| ||||||||||||| |||||||||||| ||| |||||    
T  29255660 tagatcaaagaatgacataaaaccacatctcttcgatgaacgaaggagaaagagagtttggagagaagttggaatttctctcactagaaagttagg 29255755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 29320064 - 29320173
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagtt---ggagtttctct 245  Q
    ||||||||| |  ||||||||||||| ||||||||||||||| | |||| |||||| ||||||||||||| ||||  |||||||||   |||||||||||    
T  29320064 tgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaagaaagtttaaagagaagttggaggagtttctct 29320163  T
Q  246 cactaaaaaa 255  Q
    || |||||||    
T  29320164 cattaaaaaa 29320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 32328805 - 32328896
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||| |||| ||||||||| |||||| |||||| ||||||||||||| || | |||||||||| ||||||||||||||| |||| ||||    
T  32328805 tcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaagtatagagagaagttagagtttctctcactagaaaactagg 32328896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 23128506 - 23128388
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||||||||||| |  ||||||  ||||| ||||||||||||| |||| |||||||||| ||||||||| |||    
T  23128506 tgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaagaaagtttagagagaagttagagtttctcccac 23128407  T
Q  249 taaaaaattaggaccggct 267  Q
    || || | ||| |||||||    
T  23128406 tagaatactagaaccggct 23128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 9723602 - 9723687
Alignment:
Q  171 aaaaaatgacctaaaaccacacctcct-tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||||| |||||| ||||||| ||| ||||||||| |||| ||||||||||||||||||| |||||| ||||    
T  9723602 aaaaaaagacctaaaaccacccctcctctgatgaacgaacgagaaagaaagtttagagagaagttggagtttctttcactagaaaa 9723687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7515271 - 7515330
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  || ||||||||||||||||| |||||||||||||||||||||||||||    
T  7515271 aaatcaaacgtcgcccaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 7515330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 23128639 - 23128580
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  23128639 aaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgatgaaatcac 23128580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32327286 - 32327345
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||    
T  32327286 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagactatgaaatcac 32327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 30894524 - 30894427
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 247  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||| || |||||||||| || |||| ||||||||||| |||||||||||    
T  30894524 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgattaacgaaggagaaa-aaagtttagagagaagttgaagtttctctca 30894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 9721761 - 9721830
Alignment:
Q  198 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| | ||||||    
T  9721761 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcactagaaaattatggccggct 9721830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 32191950 - 32192003
Alignment:
Q  165 tagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  32191950 tagatcaaaaaaggacctaaaaccacccctccttgatgaatgaaagagaaagaa 32192003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 32059784 - 32059688
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaatta 258  Q
    |||||| ||||| |||||| |||||||||   |||| |||||||||| ||||||||| ||||  |||||| ||||| |||||||||||| |||||||    
T  32059784 ttctaggtcaaacaatgacttaaaaccacctatcctcgatgaatgaaagagaaagaatgtttaaagagaacttggaatttctctcactagaaaatta 32059688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 7515426 - 7515509
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    ||||||| | |||||||||| |||||| |||||| ||| ||||||| | |||| |||||||||||||| ||||||| |||||||    
T  7515426 aaaaaataatctaaaaccacccctcctcgatgaacgaaagagaaagcaagtttagagagaagttggagcttctctctctaaaaa 7515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 29319947 - 29320006
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| |||||||    
T  29319947 aaatcaaacgccgcataagaggacgaacaacacaacgccgcacttagacgacaaaatcac 29320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 32059930 - 32059871
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||| | ||||||||||| ||||||||    
T  32059930 aaatcaaacgccgcacaagacgacgaacaacacaacgtcacacttagacgaagaaatcac 32059871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 34018581 - 34018522
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||   ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  34018581 aaatcaaacgtctcacaagacgacgaacaacacaacgccacacttagacgacgaaatcac 34018522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 127678 - 127632
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  127678 cacaagacgacgaacaacacaacgctgcacttagacgacgaaatcac 127632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 13546730 - 13546788
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||| | ||||||||||    
T  13546730 caaaatcaaacgccgcataagacgacgaacaacacaacgccgcactcaaacgacgaaat 13546788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 30608581 - 30608643
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccg-cacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  30608581 caaaatcaaacgccgcacaagacgacgaacaacacaacgacgtaacttagacgacgaaatcac 30608643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 30493544 - 30493491
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||    
T  30493544 aacgctgcacaagacgacgaacaacacaacaccgcactcagacgaggaaatcac 30493491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 1523410 - 1523363
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  1523410 gcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 1523363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 20220899 - 20220856
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcact 61  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  20220899 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcact 20220856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 22114883 - 22114840
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcact 61  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  22114883 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcact 22114840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 7976254 - 7976308
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||||||||||||||||||| |||  |||||| |||||||||||||||    
T  7976254 aaacgccgcacaagacgacgaacaacacaacaacgcactcagacgacgaaatcac 7976308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 9719643 - 9719693
Alignment:
Q  198 tgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||| ||| ||||||||| |||| ||||||||||||||||||||||||    
T  9719643 tgatgaacgaacgagaaagaaagtttagagagaagttggagtttctctcac 9719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 30776680 - 30776627
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||| ||||||||||| |||| |||||| |||||||||||||||    
T  30776680 aacgccgcacaagatgacgaacaacacaacgtcgcactaagacgacgaaatcac 30776627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 4010715 - 4010807
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||| ||||||||||| |||||  ||| ||||||  || ||| ||||||||||||   || |||||||| || ||||||||||||||||||    
T  4010715 ttctaggtcaaaaaatgatctaaagtcactcctcctcaataaataaaggagaaagaaaacttagagagaagatgaagtttctctcactaaaaa 4010807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 29255514 - 29255570
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||| ||||||||||||||||||||| |||||  ||||||| |||| ||||    
T  29255514 aaatcaaacgttgcacaagacgacgaacaacacaacgctacacttagtcgacaaaat 29255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 31852272 - 31852316
Alignment:
Q  33 caagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||    
T  31852272 caagacgacgaacaacacaacgtcgcactcagacgacgaaatcac 31852316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 34018448 - 34018348
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||||||||||||   | |||| |||||| ||||||||||||| |||| || | || ||| || |||||||||    
T  34018448 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccttccatcctcgatgaacgaaggagaaagaaagtttagacaaaaattgaagcttctctcac 34018349  T
Q  249 t 249  Q
    |    
T  34018348 t 34018348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 68070 - 68129
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||  ||| |||| ||| || ||||||||||||||||||||    
T  68070 aaatcaaacgccgcacaagacggtgaataacacaacaccacacttagacgacgaaatcac 68129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 14801829 - 14801782
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| || | |||||| |||||||||||||||    
T  14801829 gcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcac 14801782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 1523283 - 1523185
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||| |||||||||| ||| ||||||| |||  |||| |||||| ||   || |||||||  | ||||||||||||||| |||||||||    
T  1523283 ttctaggtcaaaaattgacctaaaatcacccctccttcatgtgtgaaagagaaataaaacttagagagaatgtagagtttctctcactataaaattagg 1523185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3355138 - 3355080
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||   ||||||| ||||||||||| ||| |||||||||||||| |||||||    
T  3355138 aaatcaaacgtcacacaagaggacgaacaacacaacaccgcacttagacgatgaaatca 3355080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 32191813 - 32191859
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| | |||||||||| ||||||||||||||||||| |||||||    
T  32191813 cacaagtcaacgaacaacacaacgccgcacttagacgacaaaatcac 32191859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 8102734 - 8102681
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||||||||||||| |||| ||||  ||||| |||||||||||||||    
T  8102734 aacgccgcacaagacgacgaaaaacacaacgttgcactaagacgacgaaatcac 8102681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 27097834 - 27097918
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||||| | ||||  |||| |||| |||||||||   || |||||||  || |||||||||||||||||||    
T  27097834 aaaaaaagacctaaaaccactcttcctgaatgagtgaaagagaaagaaaacttagagagaatgtgaagtttctctcactaaaaaa 27097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 7036094 - 7035996
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| |||| ||||||    
T  7036094 tcaaaaaatgacctaaaaccaccccaccttgatgaatgaaggagaaagaaagtttagagagaagtttgagtttctctcactagaaaactagggccggct 7035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 13007115 - 13006997
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||||||||||||||  ||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  13007115 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 13007016  T
Q  249 taaaaaattaggaccggct 267  Q
    ||||||| |||| ||||||    
T  13007015 taaaaaactagggccggct 13006997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 38597684 - 38597566
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38597684 tgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 38597585  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  38597584 tagaaaactagggccggct 38597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 6012360 - 6012446
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  6012360 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaa 6012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9113794 - 9113853
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9113794 aaatcaaacgccgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 9113853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 13007250 - 13007189
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13007250 caaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 13007189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 38007224 - 38007143
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 250  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||| | |||||||||||||||    
T  38007224 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagattgagtttctctcacta 38007143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 25980024 - 25979933
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||| ||||||| | |||| |||||| ||||||||||||| |||| |||||||||||||||||| ||||||| |||| ||||    
T  25980024 tcaaaaaatgacctgaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcgctcactagaaaactagg 25979933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 26878294 - 26878380
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcact 249  Q
    |||||||||||||| |||| |||||||||  ||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  26878294 ttctagatcaaaaa-tgacataaaaccacctctcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctcact 26878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38597816 - 38597757
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  38597816 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 38597757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 31391959 - 31392065
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| || |||||||||| |||| |||||||||| || ||| ||||||    
T  31391959 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaagtttagagagaagttagaatttttctcac 31392058  T
Q  249 taaaaaa 255  Q
    || ||||    
T  31392059 tagaaaa 31392065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 26825293 - 26825204
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||| |||| ||||    
T  26825293 aaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctcccactagaaaactagg 26825204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 34945295 - 34945204
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaa 253  Q
    |||||| |||||||||||||||||||||  | || | |||||| ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  34945295 ttctaggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaagaaagtttagagagaatttggagtttctcccactaaaa 34945204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 15571350 - 15571261
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||| ||||||||   ||||| |||||||||||||||||||| | || |||||||||| ||||||||||||||| |||| ||||    
T  15571350 aaaaaatgacataaaaccatttctcctcgatgaatgaaggagaaagaaagcttggagagaagttagagtttctctcactagaaaactagg 15571261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 7930068 - 7929979
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||    |||||||||| |||| ||||||| |||||||||||||||||| ||||    
T  7930068 ttctaggtcaaaaattgacctaaaatcacccctccttgatgaa----ggagaaagaaagtttagagagaatttggagtttctctcactagaaaa 7929979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 6012207 - 6012266
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  6012207 aaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcac 6012266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 6216918 - 6216859
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  6216918 aaatcaaatgccgcacaagacgacgaacaacataacgccgcatttagacgacgaaatcac 6216859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 9113927 - 9114022
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctc 244  Q
    ||||||||| |  |||||| | |||||||||||||||| ||| |||||| |||||| ||| ||||||||| |||| |||||||||| |||||||||    
T  9113927 tgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaagaaagtttagagagaagttagagtttctc 9114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 11977171 - 11977250
Alignment:
Q  181 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||| ||| || |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  11977171 ctaaaaccaccccttctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 11977250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 26825449 - 26825390
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  26825449 aaatcaaacgccgcacaagaagacgaacaacacaacgccgcacttagaagacgaaatcac 26825390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35850818 - 35850759
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||    
T  35850818 aaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 35850759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 11073969 - 11074028
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||| | ||||| |||||||||| ||||||||||    
T  11073969 aaatcaaacgccgcacaagacgacgaacaaaacaacgctgcacttagacaacgaaatcac 11074028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 14082442 - 14082501
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| | |||||||||||||||||| |||||| ||||||||||| ||||||||    
T  14082442 aaatcaaacgccgtacaagacgacgaacaacacaacgccacacttagacgatgaaatcac 14082501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 14726542 - 14726589
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14726542 gcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcac 14726589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 24229853 - 24229912
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24229853 aaatcaaacgtcacacaagacgacgaacaacaaaacgccgcacttagatgacgaaatcac 24229912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 31391822 - 31391881
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || ||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  31391822 aaatcaaatgccgcacaagacgaagaacaacacaacgtcgcacttagacgacgaaatcac 31391881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 2979388 - 2979441
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  2979388 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 2979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 6216761 - 6216676
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaag-ttggagtttctctcactaaaa 253  Q
    ||||| |||||||||||||||| | |||| |||||| ||| |||||| || |||| |||||||| || ||||||||||||||||||    
T  6216761 tcaaagaatgacctaaaaccacccatcctcgatgaacgaatgagaaataaagtttagagagaagttttgagtttctctcactaaaa 6216676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 24230018 - 24230107
Alignment:
Q  179 acctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||||| |  ||||| |||||| |||| | |||||| ||||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  24230018 acctaaaacctccactcctcgatgaacgaagaacaaagaaagttttagagagaagttggagtttctctcactagaaaactagggccggct 24230107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 7930196 - 7930148
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagac 66  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  7930196 aaatcaaacgacgcacaagacgacgaacaacacaacgccgcacttagac 7930148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 11074124 - 11074199
Alignment:
Q  172 aaaaatgacctaaaaccacac-ctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 246  Q
    |||||| |||||||||||| | ||||| |||||| || |||||||||| |||| |||| |||||||||||||||||    
T  11074124 aaaaataacctaaaaccaccctctcctcgatgaacgagggagaaagaaagtttagagaaaagttggagtttctctc 11074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 11977004 - 11977063
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  | |||||||||||||||| | |||||| ||||||||||||||||||||    
T  11977004 aaatcaaacgtcgtacaagacgacgaacaatacaacgccacacttagacgacgaaatcac 11977063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 25980177 - 25980122
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    |||| |||||| |||||||||||||||||||| ||  |||||||||||||||||||    
T  25980177 aaattaaacgccgcacaagacgacgaacaacacaataccgcacttagacgacgaaa 25980122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 28386934 - 28386895
Alignment:
Q  38 cgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  28386934 cgacgaacaacacaacgccgcacttagacgacgaaatcac 28386895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 14211106 - 14211009
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||||||||    
T  14211106 ttctaggtcaaaaattgacctaaaatcac-cctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagg 14211009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 39567169 - 39567071
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||| |||||||||| ||| |||||| ||||| |||| ||| |||||   ||  |||||||  || |||||||||||||||||||||||    
T  39567169 ttctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagaggaagaaaacttaaagagaagacggtgtttctctcactaaaaaattagg 39567071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 14211233 - 14211180
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| || | |||||| |||||||||||||||    
T  14211233 aacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcac 14211180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 19103549 - 19103602
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||| ||||||| |||| |||||| |||||||||||||||    
T  19103549 aacgccgcacaagacgactaacaacacaacgtcgcactaagacgacgaaatcac 19103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 28540988 - 28541041
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||| ||||||||    
T  28540988 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgatgaaatcac 28541041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 13421779 - 13421711
Alignment:
Q  200 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta-aaaaattaggaccggct 267  Q
    |||||||||| |||||||| ||||  |||||||||| |||||||||||||| ||||| ||||| |||||    
T  13421779 atgaatgaagaagaaagaaagtttaaagagaagttgaagtttctctcactagaaaaactaggatcggct 13421711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 35850657 - 35850574
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 246  Q
    |||||| |||||||| ||||||||||||| |||||| ||| || ||| |||||| || |||| ||||||| ||||| ||||||||    
T  35850657 ttctaggtcaaaaaa-gacctaaaaccacccctcctcgataaacgaatgagaaataaagtttagagagaaattggactttctctc 35850574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 41630342 - 41630286
Alignment:
Q  204 atgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||| ||||||||| | || ||||||||||| ||||||||||||| ||||||||||    
T  41630342 atgaatgagaaagaaagcttagagagaagttgaagtttctctcactgaaaaattagg 41630286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 8096566 - 8096625
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || || ||| || |||||||||| |||||||||||||||||| ||||||||    
T  8096566 aaatcaaatgccgctcaaaacaacgaacaacacaacgccgcacttagacgatgaaatcac 8096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 11867687 - 11867628
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| | |||||||||| ||||||| ||| | ||| |||||||||||||||||    
T  11867687 aaatcaaacgccgtacaagacgactaacaacacaacactgcaattagacgacgaaatcac 11867628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 37986182 - 37986225
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcact 61  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||    
T  37986182 aaatcaaacgccgcacaagacgatgaacaacacaacgccgcact 37986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38007377 - 38007318
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||| ||||| || || | || |||||||||||||||||||    
T  38007377 aaatcaaacgccgcacaagacgatgaacagcacaatgtcgtacttagacgacgaaatcac 38007318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 8985215 - 8985257
Alignment:
Q  225 gagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||||||||||||||||||||||||||||  |||| ||||||    
T  8985215 gagagaagttggagtttctctcactaaaaagctagggccggct 8985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 4770992 - 4770927
Alignment:
Q  181 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctc 246  Q
    |||||| ||| |||||| ||| || |||| |||||||| |||| |||||||||| |||||||||||    
T  4770992 ctaaaatcacccctcctcgattaacgaagaagaaagaaagtttagagagaagttagagtttctctc 4770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 19280991 - 19281044
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | | || |||||||| || ||||||||    
T  19280991 aacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 19281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 28541122 - 28541219
Alignment:
Q  163 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||| ||||||| |||||||||| ||| || ||| ||||| |||| ||| |||||   || ||||||||   |||||||||||||||||||| ||||    
T  28541122 tctaggtcaaaaattgacctaaaatcaccccacctcgatgagtgaaagaggaagaaaacttagagagaagaaagagtttctctcactaaaaaaatagg 28541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 2520684 - 2520578
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  2520684 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 2520585  T
Q  249 taaaaaa 255  Q
    || ||||    
T  2520584 tagaaaa 2520578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 26091128 - 26091222
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 256  Q
    |||||| ||||||||| |||||||| ||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26091128 ttctaggtcaaaaaataacctaaaatcactcatcctcgatgaatgaaggagaaagaaggtttagagagaagttggagtttctctcactaaaaaat 26091222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 26633885 - 26633990
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||| ||||| ||||||  ||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26633885 ttctaggtcaaaaaatgacctaagaccacccctcctcaatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcactaaaaaactagga 26633984  T
Q  262 ccggct 267  Q
    ||||||    
T  26633985 ccggct 26633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 268
Target Start/End: Complemental strand, 22611068 - 22610972
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctc 268  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||| |||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  22611068 aaaaatgacctaaaaccacccctcctcgacgaacgaaggagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagggccggctc 22610972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 4142956 - 4143067
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| ||||||  |||||||||||| ||||  ||||||||||||||||||| |||    
T  4142956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttatagagaagttggagtttctcccac 4143055  T
Q  249 taaaaaattagg 260  Q
    ||||||| ||||    
T  4143056 taaaaaactagg 4143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 10496236 - 10496143
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||||    
T  10496236 ttctaggtcaaaaattgacctaaaaccacacctcctcgatgaacgaaggagtaagaaagtttagaaagaagttggagtttctctcactagaaaa 10496143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 19853736 - 19853824
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||| |||| |||||||||||||||||||| ||||| |||| ||||    
T  19853736 aaaaatgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttagagagaagttggagtttctcccactagaaaactagg 19853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 22558687 - 22558772
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||||||||||||||||||| ||||||  ||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  22558687 tcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaaattggagtttctctctctaaaaa 22558772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 22611225 - 22611164
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  22611225 caaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 22611164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 13633998 - 13633910
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||  ||||| |||||  ||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||    
T  13633998 aaaaatgacctaaaaccaccactcctcgatgagcgaaggagaaagaaagtttagagagaagttggagtttctctcactagaaaactagg 13633910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 56156782 - 56156870
Alignment:
Q  176 atgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 264  Q
    ||||||||||||||| | ||||||||||| |||  |||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||    
T  56156782 atgacctaaaaccacccatccttgatgaacgaataagaaagaaagtttagagagaagttggagtttctctcaataaaaaactaggaccg 56156870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35348347 - 35348288
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  35348347 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 35348288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 53810915 - 53810824
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||||| |||||| |||||| ||||||| ||||| |||| |||||||| ||||||||||| ||||| |||| ||||    
T  53810915 tcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaggaagaaagtttagagagaagctggagtttctcccactagaaaactagg 53810824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 9178251 - 9178165
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||  ||| |||||||  || ||||||||||||    
T  9178251 ttctaggtcaaaaaatgacctaagaccacccctccttgatgaatgaaggagaaagaaattttagagagaaactgaagtttctctcac 9178165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 54021748 - 54021662
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||| |  ||| ||||||||||| |||||||| |||| ||||||| ||| |||||||||||||||||||    
T  54021748 tcaaaaaatgacctaaaaccactctccctcgatgaatgaagaagaaagaaagtttagagagaaattgaagtttctctcactaaaaaa 54021662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 22300732 - 22300636
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 265  Q
    |||||||||||||||||||||| |||||| || || |||| |||||| ||  ||| |||||||||||||||||||||| |||||||| |||| ||||    
T  22300732 tcaaaaaatgacctaaaaccactcctcctcgacgagtgaaagagaaataaaatttagagagaagttggagtttctctctctaaaaaactagggccgg 22300636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 274
Target Start/End: Complemental strand, 5119223 - 5119120
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggctcaa 270  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| || |||| || |||||||| | ||| |||||||| |||| |||| ||| | |||    
T  5119223 aaaaaatgacataaaaccacccctccttgatgaatgaaggagaaataaagtttagaaagaagttgaaatttatctcactagaaaactagggccgacacaa 5119124  T
Q  271 gatt 274  Q
    ||||    
T  5119123 gatt 5119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 11300060 - 11300119
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  11300060 aaatcaaacgttgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcac 11300119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 32766554 - 32766495
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  32766554 aaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcac 32766495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 40066124 - 40066183
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  40066124 aaatcaaacgctgcataagacgacgaacaacacaacgccgcacttagacgatgaaatcac 40066183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 48257664 - 48257762
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||| ||||||||| |||||| |||| | ||| ||||||||| ||||  |||||||||||||||| |||||||| |||| ||||    
T  48257664 ttctaggtcaaaaaatgacataaaaccacccctcctcgatgtacgaatgagaaagaaagtttaaagagaagttggagtttttctcactagaaaactagg 48257762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 9165267 - 9165344
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    |||| |||||||||||||||  ||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||||||    
T  9165267 aaaatatgacctaaaaccacctctcctcgatgaatgatggaaaaagaaagtttagagagaagttggagtttctctcac 9165344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 17949391 - 17949452
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  17949391 caaaatcaaacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcac 17949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 17953243 - 17953304
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  17953243 caaaatcaaacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcac 17953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 56040713 - 56040774
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  56040713 caaaattaaacgccgcacaagacgacgaacaacaaaacgccgcacttaaacgacgaaatcac 56040774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 33920937 - 33920853
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||| | | || ||||||||||| |||||||| |||| | || |||||| |||||||||||||||||||    
T  33920937 aaaaaatgacctaaaaccacccattctcgatgaatgaagaagaaagaaagtttagggaaaagttgaagtttctctcactaaaaaa 33920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 4142836 - 4142883
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4142836 gcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 4142883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 13634143 - 13634096
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13634143 gcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 13634096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 21686311 - 21686369
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  21686311 aaatcaaacgccgcacaagacgacgaacaaca-cacgccgcacttagacgacgaaatcac 21686369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 21686465 - 21686560
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||| ||||| ||||||| |||||| ||||||  |||||||||||| |||| ||||||||||  |||||||||||||| |||| ||||| |||||    
T  21686465 aaaaaagacctcaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttaaagtttctctcactagaaaactaggatcggct 21686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 26633752 - 26633799
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  26633752 gcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 26633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 43510237 - 43510178
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||    
T  43510237 aaatcaaacgccgcacaagacgacaaataacacaacgccgcacttagacgacgaaatcac 43510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 56156711 - 56156770
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  56156711 aaatcaaacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcac 56156770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 24099136 - 24099194
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  24099136 aaatcaatcgccgcacaagacgacgaacaacaaaatgccgcacttagacgacgaaatca 24099194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 35348200 - 35348102
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||||||| ||| |||||  |||||  |||||||||| || ||||  |||||||||||||||||| |||||| |||| ||||    
T  35348200 ttctaggtcaaaaaatgacctaaaatcacccctccacgatgagcgaaggagaaaaaaagtttaaagagaagttggagtttctttcactagaaaactagg 35348102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 19853579 - 19853640
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||  || |||||||||||||||| |||||||||||||||||||||||||||    
T  19853579 caaaatcaaatgccacataagacgacgaacaacacaacgccgcacttagacgacgaaatcac 19853640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 21662371 - 21662276
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 265  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21662371 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 21671135 - 21671040
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccgg 265  Q
    |||||||||||||||||||||| |||||| | ||||||||| ||||||||  ||| |||| || |||||  |||| |||||||||||||| ||||||    
T  21671135 tcaaaaaatgacctaaaaccacccctcctcg-tgaatgaagaagaaagaaattttagagaaaaattggatattctatcactaaaaaattatgaccgg 21671040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 51024713 - 51024781
Alignment:
Q  199 gatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||  ||||||||| ||||||    
T  51024713 gatgaacgaaggagaaagaaagtatagagagaagttggagtttctctcactggaaaattagggccggct 51024781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 53811068 - 53811012
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||    
T  53811068 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcatttagatgacgaaat 53811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 33921091 - 33921032
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  33921091 aaatcaaacgtcgcataagacggcgaacaacacaacgccgcacttagacgacgaaatcac 33921032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 43510093 - 43510010
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctct 245  Q
    |||||| |||||||||||||||||||||| | || | |||||| ||||||||| ||| ||||  |||||||||| |||||||||    
T  43510093 ttctaggtcaaaaaatgacctaaaaccacccttcttcgatgaacgaaggagaatgaaagtttaaagagaagttgaagtttctct 43510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 45418433 - 45418319
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||   ||||| |||||||| |||||||| ||  ||| ||||||||||| ||||| |||| |    
T  45418433 tgtagagggatgattctaggtcaaaaaatgacctaaaacca---ctcctcgatgaatggaggagaaaaaatttttagagagaagttgaagtttttctcgc 45418337  T
Q  249 taaaaaattaggaccggc 266  Q
    || |||| |||| |||||    
T  45418336 tagaaaactagggccggc 45418319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 51888438 - 51888529
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||||| |||||| ||||| |||| |||||||||    | |||| |||||| ||||||||||| ||||||| ||||    
T  51888438 tcaaaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaagaaaacgtagagaaaagttgaagtttctctcaataaaaaactagg 51888529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 2520819 - 2520758
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaaca--acagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||  ||| ||| |||||||||||||||||||||||    
T  2520819 aaatcaaacgccgcacaagacgacgaacaacacacaacaccgcacttagacgacgaaatcac 2520758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 5119381 - 5119320
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||| ||||| |||||||||| ||  |||||||||||||||||||||||    
T  5119381 caaaatcaaacgccgcaaaagacaacgaacaacacaataccgcacttagacgacgaaatcac 5119320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 12199760 - 12199821
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||| ||||||||| |||| |||||||| |||||| |||| |||||||||||||||    
T  12199760 caaaatcaaaagctgcacaaaacgatgaacaacacaacgccacactcagacgacgaaatcac 12199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 26090984 - 26091045
Alignment:
Q  17 aaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcact 78  Q
    |||||||||||| |||||| ||| ||||||||||||||||||| ||| || |||||||||||    
T  26090984 aaaatcaaacgccgcacaaaacggcgaacaacagaacgccgcatttaaacaacgaaatcact 26091045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 28857433 - 28857380
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  28857433 aacgccgcacaagacaacgaacaacacaacgccgcacttagacgatgaaatcac 28857380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 31891369 - 31891422
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||    
T  31891369 aacgctacacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 31891422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 36204475 - 36204516
Alignment:
Q  36 gacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  36204475 gacgacgaacaacacaacgccgcacttagacgacgaaatcac 36204516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 36204604 - 36204689
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 256  Q
    |||||||||||||||||||  | |||||||||| |||| |||||||||    | |||||||| ||||||| |||||||||||||||    
T  36204604 aaaaaatgacctaaaaccatccatccttgatgattgaaagagaaagaaaacctagagagaaggtggagttcctctcactaaaaaat 36204689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 29120432 - 29120491
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  | ||||||||| |||||||| | |||||||||||||||||||||||||    
T  29120432 aaatcaaacgtcgtacaagacgatgaacaacacagcgccgcacttagacgacgaaatcac 29120491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 29961151 - 29961246
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 264  Q
    ||||||||| |||||||| ||  |||| | ||||||  ||||| |||||| |||| ||||||||||||||||||||||| || ||| |||| ||||    
T  29961151 tcaaaaaataacctaaaatcatccctcttcgatgaacaaaggaaaaagaaagtttagagagaagttggagtttctctcattagaaagttagaaccg 29961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 44596704 - 44596645
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||| | |||| | ||||||||||| ||||||||    
T  44596704 aaatcaaacgccgcacaagacgacgaacaatacaacgtcacacttagacgaggaaatcac 44596645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 53444146 - 53444099
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||| || |||||||||||||||||||    
T  53444146 gcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 53444099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 54021900 - 54021841
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||| ||||||| || |||||| |||||| ||||||||||    
T  54021900 aaatcaaacgccgcacaagacgactaacaacacaatgccgcaattagacaacgaaatcac 54021841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 19896617 - 19896667
Alignment:
Q  27 gctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||| ||||||||||| ||||||||||||||||||| |||||||    
T  19896617 gctgcaaaagatgacgaacaacacaacgccgcacttagacgacaaaatcac 19896667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 35395756 - 35395798
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  35395756 acaagacgacgaacaacacaacgccgcactcagacgacgaaat 35395798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 53444010 - 53443928
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    ||||||||||||||||||   |||||  ||||| ||| |||||| || |||| ||||||||||| ||||| ||||||||||||    
T  53444010 aaaaatgacctaaaaccaacgctcctcaatgaacgaaagagaaaaaaagtttagagagaagttgaagtttatctcactaaaaa 53443928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10496377 - 10496320
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    ||||||||||||   ||||||||||||||||||| | ||||||||||| |||||||||    
T  10496377 caaaatcaaacgtcacacaagacgacgaacaacacatcgccgcacttacacgacgaaa 10496320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 22300880 - 22300827
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||  |||||||||||||||    
T  22300880 aacgccgcacaagacgacgaacaacacaacgtcgcacacagacgacgaaatcac 22300827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 24099295 - 24099384
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||||  ||||| |||||| | || |||||||| |||| ||||||| ||  ||||||| |||||| |||| ||||    
T  24099295 aaaaaatgacctaaaaccacctctcctcgatgaacgtagaagaaagaaagtttagagagaatttaaagtttctttcactagaaaactagg 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 36194736 - 36194683
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  36194736 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacaacgaaatcac 36194683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 52944342 - 52944289
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  52944342 aacgccgcacaaaacgacgaacaacacaacgccgcactcagactacgaaatcac 52944289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 22039013 - 22039105
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    ||||||||| |||| |||||||||||||| ||| || ||||| |||| |||||||||   ||||| | |||||  |||||||||||| |||||    
T  22039013 ttctagatccaaaattgacctaaaaccacccctgctcgatgagtgaaagagaaagaaaactttgaaaaaagttaaagtttctctcacaaaaaa 22039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 260
Target Start/End: Complemental strand, 27651840 - 27651744
Alignment:
Q  164 ctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||| ||||||| |||||||| | ||| |||||| ||||| |||| ||| |||||  ||| ||||||||   || ||||||||||||||||||||||    
T  27651840 ctaggtcaaaaattgacctaacatcacccctcctcgatgagtgaaagaggaagaaaatttagagagaagacagaatttctctcactaaaaaattagg 27651744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 32766421 - 32766309
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggtttt-gagagaagttggagtttctctca 247  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||  ||  ||||| |||||||||| ||  |||| || ||||||||||||||||  ||    
T  32766421 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccctctcaatgaacgaaggagaaaaaattttttagaaagaagttggagtttcttcca 32766322  T
Q  248 ctaaaaaattagg 260  Q
    ||| |||| ||||    
T  32766321 ctagaaaactagg 32766309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8670525 - 8670466
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| | |||||||| ||| ||||||| ||||||||||||| ||||| |||||||    
T  8670525 aaatcaaacaccgcacaagatgactaacaacacaacgccgcacttacacgacaaaatcac 8670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 27651965 - 27651918
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| ||||  ||||| |||||||||||||||    
T  27651965 gcacaagacgacgaacaacacaacgttgcactaagacgacgaaatcac 27651918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 37030301 - 37030242
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||   |||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  37030301 aaatcaaacgccatacaagacgacgaacaacacaacgccgtactcagatgacgaaatcac 37030242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 38166313 - 38166356
Alignment:
Q  34 aagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||    
T  38166313 aagacaacgaacaacacaacgccgcactcagacgacgaaatcac 38166356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 49072809 - 49072852
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    |||||||||||||||||||| |||| |||||| |||||||||||    
T  49072809 gcacaagacgacgaacaacacaacgtcgcactcagacgacgaaa 49072852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 1621719 - 1621805
Alignment:
Q  181 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||| ||| |||||| ||||| |||| ||| |||||   || ||||||||   ||||||||||||||||||||||||| ||||||    
T  1621719 ctaaaatcacgcctcctcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaattagggccggct 1621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 255
Target Start/End: Complemental strand, 9643208 - 9643178
Alignment:
Q  225 gagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||||||||||||    
T  9643208 gagagaagttggagtttctctcactaaaaaa 9643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 43353611 - 43353657
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||| || |||||||  |||||||||||||||    
T  43353611 cacaagacgacgaacaacataaagccgcaccgagacgacgaaatcac 43353657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 47320623 - 47320709
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||||||||| ||| || |||||  ||| ||||| |||   ||  |||||||||| |||||||||||||||||||    
T  47320623 tcaaagaatgacctaaaaccaccccttctcgatgagcgaaagagaaggaaaacttaaagagaagttgaagtttctctcactaaaaaa 47320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 52934022 - 52934072
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||||| | ||||||||||| ||||||||||| |||||| |||||    
T  52934022 aacgctgcacaaaatgacgaacaacacaacgccgcactcagacgatgaaat 52934072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 9713786 - 9713697
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||| ||||| ||| |||||| ||||| |||| ||||||||    || |||||||| | |||||||||||||||||||| ||||    
T  9713786 aaaaaaagacataaaatcacccctcctcgatgagtgaaagagaaagagaacttagagagaaggtagagtttctctcactaaaaaactagg 9713697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 18935681 - 18935576
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| ||||||| |||||| ||| ||| |||||| |||||  ||| ||| |||||   || ||||||||   ||||||||||||||||||| |||||     
T  18935681 ttctaggtcaaaaattgaccttaaatcacccctcctcgatgagcgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaacttaggg 18935582  T
Q  262 ccggct 267  Q
    ||||||    
T  18935581 ccggct 18935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 31381718 - 31381771
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | | || |||||||| || ||||||||    
T  31381718 aacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 31381771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 38706756 - 38706809
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | | || |||||||| || ||||||||    
T  38706756 aacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 38706809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 47320469 - 47320522
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| || | |  |||||||||||||||||||    
T  47320469 aacgccgcacaagacgacgaacaacacaaggtcttacttagacgacgaaatcac 47320522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 52060993 - 52061050
Alignment:
Q  19 aatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||||||||| | ||||||||||||||| || || ||| ||||||||||| |||||||    
T  52060993 aatcaaacgccgtacaagacgacgaacatcacaatgccacacttagacgatgaaatca 52061050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 29961005 - 29961049
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||||||||||||| ||| || ||||||||||| |||||    
T  29961005 gcacaagacgacgaacaacacaaccccacacttagacgatgaaat 29961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 4778650 - 4778532
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  4778650 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 4778551  T
Q  249 taaaaaattaggaccggct 267  Q
    ||||||| |||| ||||||    
T  4778550 taaaaaactagggccggct 4778532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 7646369 - 7646258
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  7646369 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 7646270  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  7646269 tagaaaactagg 7646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 12677498 - 12677616
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||| |||| || |||||| ||||||  |||||||||||| |||| ||||||||||||||||||||||||    
T  12677498 tgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctcac 12677597  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  12677598 tagaaaactagggccggct 12677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 7678080 - 7678181
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||| | ||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  7678080 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaagtttagagagaagttggagtttctctcac 7678179  T
Q  249 ta 250  Q
    ||    
T  7678180 ta 7678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 27097620 - 27097725
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||| |||| |||||||||||||||||||  ||||| |||| ||||     
T  27097620 ttctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttcttccactagaaaactaggg 27097719  T
Q  262 ccggct 267  Q
    ||||||    
T  27097720 ccggct 27097725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 1421546 - 1421462
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||| ||||    
T  1421546 aaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagcgagaagttggagtttctctcactagaaaa 1421462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 7448145 - 7448034
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||||  ||||||||||||||||||||| |||||| |||||| |||||| |||||| |||| |||||||||||||||||||| |||    
T  7448145 tgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaaaaagaaagtttagagagaagttggagtttctcccac 7448046  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  7448045 tagaaaactagg 7448034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 31788353 - 31788242
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||| |||||||||| |  ||||| |||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  31788353 tgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctctcctcgatgaacgaagaagaaagaaagtttagagagaagttggagtttctctcac 31788254  T
Q  249 taaaaaattagg 260  Q
    || |||||||||    
T  31788253 tagaaaattagg 31788242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 35220212 - 35220110
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| ||||||||| |||||||||||| ||||   |||||||||||||||||||| |||| |||||| ||||||||||||||||||| |||| ||||     
T  35220212 ttctaggtcaaaaaataacctaaaaccacccctc---gatgaatgaaggagaaagaaagtttagagagaggttggagtttctctcactagaaaactaggg 35220116  T
Q  262 ccggct 267  Q
    ||||||    
T  35220115 ccggct 35220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 4098987 - 4098889
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||||||||||||| |||| | |||| |||||| ||| ||||||||| |||| |||||||||||||||||||| |||||||||| ||||    
T  4098987 ttctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaagaaagtttagagagaagttggagtttctcccactaaaaaactagg 4098889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 36943339 - 36943437
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||||||||||| |||||| ||| || ||||||||||||| |||| |||| || |||||||||||||||||| |||| ||||    
T  36943339 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatcaacgaaggagaaagaaagtttagagataaattggagtttctctcactagaaaactagg 36943437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 43397334 - 43397439
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||||||||| ||| || |||||| |||| | |||||| ||||  ||||||||||||||||||||||||| |||| ||||     
T  43397334 ttctaggtcaaaaaatgacctaaaaccaccccttctcgatgaacgaagaaaaaagaaagtttaaagagaagttggagtttctctcactagaaaactaggg 43397433  T
Q  262 ccggct 267  Q
    ||||||    
T  43397434 ccggct 43397439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 18763365 - 18763265
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||| |||||||||  ||||| |||| ||||||| ||||||| |||| ||||||||||||||||||||||||    
T  18763365 tgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgatggatgaaggtgaaagaaagtttagagagaagttggagtttctctcac 18763266  T
Q  249 t 249  Q
    |    
T  18763265 t 18763265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 1421706 - 1421647
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  1421706 aaatcaaacgctgcacaagacgacgaacaacataacaccgcacttagacgacgaaatcac 1421647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 7646503 - 7646444
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7646503 aaatcaaacgccgcacaagacgacgaacaacataacgccgcacttagacgacgaaatcac 7646444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 7677943 - 7678002
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7677943 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 7678002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 36943191 - 36943250
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  36943191 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 36943250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 5428084 - 5428173
Alignment:
Q  163 tctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaa 252  Q
    ||||| ||||||| | |||||||||||| |||||| |||||| |||||||||||||  ||| |||||||||||||||||||||| |||||    
T  5428084 tctaggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctctctaaa 5428173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 9169482 - 9169566
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 256  Q
    ||||||||||||||||||| |||||| ||| || ||| ||||||||| |||| |||||||||||||||||||| ||||| |||||    
T  9169482 aaaaatgacctaaaaccacccctcctcgataaacgaatgagaaagaaagtttagagagaagttggagtttctcccactagaaaat 9169566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 7448277 - 7448218
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  7448277 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcac 7448218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 11985432 - 11985543
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| | |||||||||| |||||||||  ||||| || ||||||| ||||||||| |||| |||||||||||||||||||||||     
T  11985432 tgtagaggggtgattctaggttaaaaaatgacttaaaaccaccactcctcgaagaatgaaagagaaagaaagtttagagagaagttggagtttctctcat 11985531  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  11985532 tagaaaactagg 11985543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 38445196 - 38445137
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  38445196 aaatcaaacgccgcacaagacgacgaacaacacaacgctgcacttagacgacgaaatcac 38445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 4099135 - 4099077
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||    
T  4099135 caaaatcaaacgccgcacaagacaacgaacaacacaacgccgcacttagacgacgaaat 4099077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4778783 - 4778725
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  4778783 aaatcaaacgctgcacaagacgacgaataacacaacgccgcacttaaacgacgaaatca 4778725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 27097476 - 27097534
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27097476 aaatcaaatgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatca 27097534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 31128974 - 31129056
Alignment:
Q  173 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||| ||| |||||| ||| || ||||||||||||| |||| ||||||||||| ||||| |||||||||||||    
T  31128974 aaaatgacctaaaatcacccctcctcgatcaacgaaggagaaagaaagtttagagagaagttgaagtttttctcactaaaaaa 31129056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 35220357 - 35220296
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  35220357 caaaatcaaacgccgcacaagacgatgaacaacataatgccgcacttagacgacgaaatcac 35220296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 37876813 - 37876893
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttc 242  Q
    |||||| ||||||| |||||||||||||| |||||| |||||| |||| |||||||| |||| ||||||||||||| ||||    
T  37876813 ttctaggtcaaaaattgacctaaaaccacccctcctcgatgaacgaagaagaaagaaagtttagagagaagttggaatttc 37876893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 5427938 - 5427997
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  5427938 aaatcaaacgccacacaagacgacgaacaacaaaacgccgcacttggacgacgaaatcac 5427997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9169328 - 9169387
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  9169328 aaatcaaacgacgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcac 9169387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 18763498 - 18763439
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  18763498 aaatcaaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcac 18763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 37876676 - 37876735
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37876676 aaatcaaatgccgcacaagacgacgaacaacaaaacgccgcacttagacgaccaaatcac 37876735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 43397189 - 43397248
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  43397189 aaatcaaacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcac 43397248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 29279794 - 29279883
Alignment:
Q  170 caaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||| | | | |||| ||||||||||| |||||||| | || |||||||||||||||||||||||| | |||||||||    
T  29279794 caaaaaatgacctaaaatcgctcatcctcgatgaatgaag-agaaagaaaggttagagagaagttggagtttctctcacaagaaaattagg 29279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 31210677 - 31210735
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||||    
T  31210677 aaatcaaacgccgcacaagacaacaaacaacacaacgccgcacttagacgacgaaatca 31210735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 4041662 - 4041723
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| | |||||||||||||||||| |||| |||||||||| |||||||||||    
T  4041662 caaaatcaaacgccgtacaagacgacgaacaacacaacgacgcacttagaagacgaaatcac 4041723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 4904213 - 4904274
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||  |||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  4904213 caaaatcaaacgtcgcacaagacgacgaacaacacaacgccacactttgacgacgaaatcac 4904274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 10237299 - 10237352
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  10237299 aacgctgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 10237352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 11985298 - 11985359
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||||| || ||||||| || ||||||||||||||||||||||||    
T  11985298 caaaatcaaacgccgcacaagacaacaaacaacacaaagccgcacttagacgacgaaatcac 11985359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 31788487 - 31788431
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||    
T  31788487 aaatcaaacgccgcacaagacaacgaacaacaaaacgtcgcacttagacgacgaaat 31788431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 1415587 - 1415528
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||| |||||||| |||| || |||||||||||||||||||    
T  1415587 aaatcaaacgccgcacaagacgaagaacaacacaacgtcgtacttagacgacgaaatcac 1415528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 19062422 - 19062481
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  19062422 aaatcaaatgccgcacaagacgacgaacaacacaacgctgcacttagacgacgatatcac 19062481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 33923735 - 33923676
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||||||||||||||||||  || |||||||| ||||||||||    
T  33923735 aaatcaaacgccgcacaagacgacgaacaacagaacatcgtacttagacaacgaaatcac 33923676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 42698928 - 42698987
Alignment:
Q  200 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattag 259  Q
    |||||| |||||||||||| |||| || |||||||| |||||||||||||||||||||||    
T  42698928 atgaataaaggagaaagaaagtttagaaagaagttgaagtttctctcactaaaaaattag 42698987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 41694493 - 41694407
Alignment:
Q  168 atcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||||||||||||||||| ||| || || ||||| ||||||||| |||| | || |||||||| || ||||||||| ||||||||    
T  41694493 atcaaaaaatgacctaaaactacatcttctcgatgagtgaaggagagagaaagcttagagagaaggtgaagtttctcttactaaaaa 41694407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 12647999 - 12648052
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  12647999 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcac 12648052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 24461323 - 24461238
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 247  Q
    |||||| |||||||||||||||||||||| ||||||| |||| |||| |||||  ||   || |||||||||||||||||| ||||    
T  24461323 ttctaggtcaaaaaatgacctaaaaccacccctccttaatgagtgaaagagaataaaaacttagagagaagttggagtttcactca 24461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 8809156 - 8809073
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||| ||||||||||   |||| || | ||||||||||||||| |||| |||||||||| |||||||||  |||||||||    
T  8809156 aaaaatgatctaaaaccacctgtcctcgacgtatgaaggagaaagaaagtttagagagaagttagagtttctcctactaaaaaa 8809073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 19028984 - 19029043
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || ||||| ||||||||| |||| ||||||| |||||||||||||||||||    
T  19028984 aaatcaaatgccgcacatgacgacgaataacacaacgccgaacttagacgacgaaatcac 19029043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 29173805 - 29173848
Alignment:
Q  34 aagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  29173805 aagacgatgaacaacacaacgccgcacttagacgacgaaatcac 29173848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 29574713 - 29574760
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  29574713 gcacaagacgacgaacaacacaacgccgcactcggacgacgaaatcac 29574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 32448703 - 32448750
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||    
T  32448703 gcacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcac 32448750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 36691732 - 36691657
Alignment:
Q  181 ctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagag-aagttggagtttctctcactaaaaaa 255  Q
    |||||||||| ||||||  || || |||||||||||||||||| || || ||||||||||||||||||||| ||||    
T  36691732 ctaaaaccacccctcctcaattaaggaaggagaaagaaggtttagaaagaaagttggagtttctctcactagaaaa 36691657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36691904 - 36691845
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  |||| | |||| |||||||| |||||||||||||||||||||||||||    
T  36691904 aaatcaaacgtcgcactaaacgatgaacaacaaaacgccgcacttagacgacgaaatcac 36691845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 39310922 - 39310981
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||| |||||||| ||| || |||||||| || ||||||||    
T  39310922 aaatcaaacgctgcacaagacgaagaacaacacaacaccacacttagatgatgaaatcac 39310981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 4904358 - 4904444
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||| |||||||||  ||| |  || || ||| ||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  4904358 tcaaaaaatgacataaaaccaccactcttcaataaacgaatgagaaagaaagtttagagagaagttgaagtttctcttactaaaaaa 4904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 23933869 - 23933911
Alignment:
Q  225 gagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  23933869 gagagaaggtggagttactctcactaaaaaattaggaccggct 23933911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 30400103 - 30400161
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||| || ||||||||||| |||||||| || | |||||||||||||||||||    
T  30400103 caaaatcaaatgccgcacaagacgaagaacaacacaatgtcgcacttagacgacgaaat 30400161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 32448843 - 32448929
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||||||||| |||||| ||||| |||| || ||  ||  |||  ||||||||| ||||||||||||||||||||    
T  32448843 tcaaataatgacctaaaaccacccctcctcgatgagtgaaagaaaagaaaaatttaaagagaagttagagtttctctcactaaaaaa 32448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 36175666 - 36175712
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||||||||||||||||  || |||||||||||||||||||||||    
T  36175666 aaaaatgacctaaaaccacctcttcttgatgaatgaaggagaaagaa 36175712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 38445063 - 38444982
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 231  Q
    ||||||||| |  |||||||||||||| ||||||||||||||  ||| | |||||| ||||||||||||| |||| |||||||    
T  38445063 tgtagaggggtgattctagatcaaaaa-tgacctaaaaccacctctcatcgatgaacgaaggagaaagaaagtttagagagaa 38444982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 6358952 - 6359005
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| |||| | |||| ||||||| |||||||    
T  6358952 aacgctgcacaagacgacgaacaacacaacgacacactcagacgacaaaatcac 6359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 10929677 - 10929632
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||    
T  10929677 acaagacgacgaacaacacaacaccgcactcagacgacgaaatcac 10929632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 28871987 - 28872069
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||||| | |||| |||||||||| |||||| ||   || |||||||  ||||||||||||||||||||||    
T  28871987 aaaaaaagacctaaaaccactcatcctcgatgaatgaatgagaaaaaa--attagagagaatgtggagtttctctcactaaaaaa 28872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 42698769 - 42698829
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  42698769 caaaatcaaacgccacacaagacgacgaacaacacaacgtcgcac-tagacgatgaaatcac 42698829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 34128769 - 34128813
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||    
T  34128769 gcacaagacgacgaacaacataacaccgcactcagacgacgaaat 34128813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36323899 - 36323840
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| ||||||||| || ||||||| || |||||||| | |||||||||||||    
T  36323899 aaatcaaacgccgcacaagacaacaaacaacacaaagccgcactcaaacgacgaaatcac 36323840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 37416576 - 37416493
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||||||||||| ||| |||| | || ||||||| || ||| ||  ||| ||||||||||| ||||||||||| |||||||    
T  37416576 aaaaatgacctaaaatcacccctcatcgacgaatgaaagataaaaaaaatttagagagaagttgaagtttctctcattaaaaaa 37416493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 31128851 - 31128909
Alignment:
Q  19 aatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||||||||||| ||||||| ||||||||| ||| | |||||||||||    
T  31128851 aatcaaacgccacacaagacgactaacaacacaacgccgcaattaaatgacgaaatcac 31128909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 3308962 - 3308909
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||| || |||| |||| |||||| |||||||||||||||    
T  3308962 aacgccgcacaagacgacaaataacacaacgtcgcactaagacgacgaaatcac 3308909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 18107951 - 18108044
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| ||||||||||||||||||||||   ||||  ||||||||| |||||||||   || |||||||  |||| ||||||| ||| |||||    
T  18107951 ttctaggtcaaaaaatgacctaaaaccaccattcctcaatgaatgaaagagaaagaaaacttagagagaaagtggactttctcttacttaaaaa 18108044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 25509291 - 25509379
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||   |||| |||||| |||| |||||||| | || |||| ||||| |||||| |||||||| |||||||||    
T  25509291 aaaaaaagacctaaaaccaccattcctcgatgaacgaagaagaaagaaag-ttagagaaaagtttgagtttttctcactagaaaattagg 25509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 4042230 - 4042278
Alignment:
Q  200 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||| ||| |||||| || |||| ||||||||||||||||||||||||    
T  4042230 atgaaggaatgagaaaaaaagtttagagagaagttggagtttctctcac 4042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 17249226 - 17249274
Alignment:
Q  25 acgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaa 73  Q
    |||| |||||||||||||||||||| || | ||||||||||| ||||||    
T  17249226 acgccgcacaagacgacgaacaacacaaggtcgcacttagacaacgaaa 17249274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 18107817 - 18107849
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacag 50  Q
    ||||||||||| |||||||||||||||||||||    
T  18107817 aaatcaaacgccgcacaagacgacgaacaacag 18107849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 29279655 - 29279699
Alignment:
Q  33 caagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| | ||||| ||||||||| |||||||||||||||||    
T  29279655 caagacgactaccaacacaacgccgcaattagacgacgaaatcac 29279699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 34335780 - 34335831
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||| ||||||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  34335780 aacgttgcacaagacgaccaacaacacaacgccgtactta-acgacgaaatca 34335831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 15379 - 15261
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||||| ||||||||||||    
T  15379 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacgaaggagaaagaaagtttagagagaagttgaagtttctctcac 15280  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  15279 tagaaaactagggccggct 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 15506 - 15452
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  15506 aaacgccgcacaagacgacgaacaacacaacaccgcacttagatgacgaaatcac 15452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 19404956 - 19405062
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||| ||  |||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  19404956 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagatttagagagaagttggagtttctctcac 19405055  T
Q  249 taaaaaa 255  Q
    |||||||    
T  19405056 taaaaaa 19405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 42978484 - 42978391
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| |||||||||| ||||||||||||||| ||||    
T  42978484 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctcactagaaaa 42978391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 9450352 - 9450450
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| |||||||||||||||||||||  |||||| |||||| ||||||||||||| ||||  | ||||||||||||||||||||||| |||||||||    
T  9450352 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaacgaaggagaaagaaagtttaaaaagaagttggagtttctctcactagaaaattagg 9450450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 12141530 - 12141615
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||||||||||||||||||| |||| | |||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  12141530 tcaaaaaatgacctaaaaccacccctcttcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctctctaaaaa 12141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 8013667 - 8013778
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||| |||||||||| |||||| ||||||  ||| |||||||| |||| ||||||||||| ||||||||||||    
T  8013667 tgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaagaagaaagaaagtttagagagaagttgaagtttctctcac 8013766  T
Q  249 taaaaaattagg 260  Q
    ||||||| ||||    
T  8013767 taaaaaactagg 8013778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 19404824 - 19404886
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcact 78  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19404824 caaaatcaaacgatgcacaagacgacgaacaatagaacgccgcacttagacgacgaaatcact 19404886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 37837660 - 37837758
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctca 247  Q
    ||||||||| |  |||||| |||||||||||||||||||||| ||||||  ||||| |||||||||| || |||| |||||||||||||||||||||||    
T  37837660 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaataaagtttagagagaagttggagtttctctca 37837758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 30757021 - 30757134
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||| |||||||||||| |||||| |||||| ||| |||||||||  ||| ||||||||||| |||||||| |||    
T  30757021 tgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaagaaaatttagagagaagttgaagtttctcccac 30757120  T
Q  249 taaaaaattaggac 262  Q
    ||||||| ||||||    
T  30757121 taaaaaactaggac 30757134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 48061291 - 48061206
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    ||||||||||||||||||||||  ||||| |||||| |||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  48061291 tcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggataaagaaagtttagagagaagttggagtttctctctctaaaaa 48061206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 8001615 - 8001674
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  8001615 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 8001674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 19296892 - 19296833
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  19296892 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 19296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 30756888 - 30756947
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30756888 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 30756947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34899676 - 34899735
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  34899676 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 34899735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 42978632 - 42978573
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42978632 aaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac 42978573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 48316881 - 48316940
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  48316881 aaatcaaacgctgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcac 48316940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 47590335 - 47590274
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  47590335 caaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcac 47590274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 34899809 - 34899912
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| | ||   | |||| ||||||||||||| |||| |||||||||||||||||||| |||    
T  34899809 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccactcatc---ggtgaacgaaggagaaagaaagtttagagagaagttggagtttctcccac 34899905  T
Q  249 taaaaaa 255  Q
    |||||||    
T  34899906 taaaaaa 34899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 39171658 - 39171718
Alignment:
Q  17 aaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  39171658 aaaatcaaacgctgcacaagacgacgaacaacaaaacgcagcacttagatgacgaaatcac 39171718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 48317014 - 48317114
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| || ||||||||||||||||||| ||||||||||||| ||||||||||| |  ||| |||||||||| |||||||| ||||    
T  48317014 tgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagcaaatttagagagaagttagagtttctttcac 48317113  T
Q  249 t 249  Q
    |    
T  48317114 t 48317114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 4529948 - 4529857
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||||||||  || |||||||| || |||||||||||||| |||| ||||    
T  4529948 tcaaaaaatgacctaaaatcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctcactagaaaactagg 4529857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9450206 - 9450265
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  9450206 aaatcaaacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcac 9450265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 19296767 - 19296656
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| |||||||||||||||||||||| |||||| |||||| |||||| ||| ||   || ||| |||||||||||||||| |||    
T  19296767 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggacaaaaaaaaattagagggaagttggagtttctcccac 19296668  T
Q  249 taaaaaattagg 260  Q
    ||||||| ||||    
T  19296667 taaaaaactagg 19296656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 39171794 - 39171905
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||||||||||| |||||| |||||| |||||| |||| |||||||| |||| |||| | |||||||||| ||||||    
T  39171794 tgtagaggggtgattctaggtcaaaaaatgacctacaaccacccctcctcgatgaacgaagaagaaagaaagtttagagatacgttggagtttatctcac 39171893  T
Q  249 taaaaaattagg 260  Q
    || |||| ||||    
T  39171894 tagaaaactagg 39171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 39328859 - 39328918
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39328859 aaatcaaacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcac 39328918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 47590180 - 47590085
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    ||||||||||||||| ||| ||||||  ||||| ||| |||||||||  ||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  47590180 aaaaatgacctaaaatcacccctcctctatgaacgaatgagaaagaaaatttagagagaagttggaatttctctcactaaaaaacttggaccggct 47590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 13797133 - 13797251
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| | |||||||||||||||||||  | |||| |||||| ||| |||||||||  |||  |||||||||| ||||||||||||    
T  13797133 tgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagagaagttgaagtttctctcac 13797232  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||||||||||    
T  13797233 tagaaaactaggaccggct 13797251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 37837525 - 37837586
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||    
T  37837525 caaaatcaaacgccgcacaagacgacgaacaacacaacgccgcacttagatgatgaaatcac 37837586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 39329017 - 39329113
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||| |||||||| |||| |||||| ||||||  |||||||||||| |||| || | ||||| ||||||||||||||| ||||||||| ||||||    
T  39329017 aaaaaaagacctaaacccactcctcctcgatgaacaaaggagaaagaaagtttagaaaaaagtttgagtttctctcactagaaaattagggccggct 39329113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 12141377 - 12141436
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12141377 aaatcaaatgccgcacaagacgacaaacaacaaaacgccgcacttagacgacgaaatcac 12141436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 26623848 - 26623918
Alignment:
Q  7 aacaatattcaaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| || ||||||||||||| | |||||||||||||||||| ||||||||||| |||||| ||||||||    
T  26623848 aacaagatgcaaaatcaaacgccgtacaagacgacgaacaacacaacgccgcactcagacgatgaaatcac 26623918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 48061446 - 48061385
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||  ||| |||||||||||||||| || ||||||||||||||||||||||||    
T  48061446 caaaatcaaacgtcgcataagacgacgaacaacaaaatgccgcacttagacgacgaaatcac 48061385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 24770268 - 24770209
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||  ||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  24770268 aaatcaaacgtcgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcac 24770209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 25287403 - 25287498
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccg 264  Q
    ||||| ||| || |||||||||  ||| | || |||||||||||||||||  |||  |||||||||  ||||||||||||||||||||||||||||    
T  25287403 tcaaataataacttaaaaccacctctcttcgacgaatgaaggagaaagaaaatttatagagaagttatagtttctctcactaaaaaattaggaccg 25287498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 40993192 - 40993145
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  40993192 gcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcac 40993145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 45349868 - 45349927
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  45349868 aaatcaaacgccacacaaaacgacgaacaacacaacgccacacttagacgacgaaatcac 45349927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 5078608 - 5078702
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaat 256  Q
    |||||| |||||||||||||||||| ||| | ||||| |||| |||| || |||||    || ||||||||||| ||||||||||||||||||||    
T  5078608 ttctaggtcaaaaaatgacctaaaatcacccttccttaatgagtgaaagataaagagaacttagagagaagttgaagtttctctcactaaaaaat 5078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 24350919 - 24350973
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcact 78  Q
    ||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  24350919 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcact 24350973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 38798805 - 38798747
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||||||| |||||||||||||||||||| |||| || ||||||||||| ||||    
T  38798805 caaaatcaaacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacaaaat 38798747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 28476236 - 28476183
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  28476236 aacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 28476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 31235838 - 31235891
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | |||| |||||||| |||||||||||    
T  31235838 aacgctgcacaagacgacgaacaacaaaccgccacacttagatgacgaaatcac 31235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 1749235 - 1749282
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||    
T  1749235 gcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 1749282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9977275 - 9977334
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||   |||||||||||||||| | ||||| |||||||||||||||||||||    
T  9977275 aaatcaaacgccaaacaagacgacgaacaatacaacgctgcacttagacgacgaaatcac 9977334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 40993050 - 40992960
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||||||||||||||||| || | |||| |||||| |||| ||||  || |||| |||||||||||||||||||| ||||| |||| ||||    
T  40993050 tcaaaaaatgacctaaaactac-catcctcgatgaacgaagaagaactaaagtttagagagaagttggagtttctcccactagaaaactagg 40992960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 3267281 - 3267327
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttag 64  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||    
T  3267281 aaatcaaacgtcgcacaagacgacgaacaacaaaacgccgcacttag 3267327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 24069471 - 24069525
Alignment:
Q  23 aaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||| ||||||||| |||||||||| ||||||||||| |||||| ||||||||    
T  24069471 aaacgccgcacaagacaacgaacaacacaacgccgcactcagacgatgaaatcac 24069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25255249 - 25255199
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacga 68  Q
    |||||||||||||||||||||| |||| |||| ||||||||||| ||||||    
T  25255249 aaatcaaacgctgcacaagacggcgaataacacaacgccgcactcagacga 25255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 22742953 - 22742900
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| |||| || ||| |||||||||||||||    
T  22742953 aacgccgcacaagacgacgaacaacacaacgtcgaactaagacgacgaaatcac 22742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 35132948 - 35132903
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||    
T  35132948 acaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 35132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 13797023 - 13797059
Alignment:
Q  40 acgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    |||||||||| ||||||||||||||||||||||||||    
T  13797023 acgaacaacacaacgccgcacttagacgacgaaatca 13797059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 48930782 - 48930730
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||| ||||||||||||||| |||| |||| |||||| ||||||||||||||    
T  48930782 aacgccgcacaagacgacgaataacacaacgtcgcactaagacgacgaaatca 48930730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 3224642 - 3224725
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||||||||||||||||| | || | || || |||| |||||||||  ||| || | |||||||| |||||||||||||||||    
T  3224642 aaaaatgacctaaaaccacccatcttcgaagagtgaaagagaaagaaaatttagaaaaaagttggaatttctctcactaaaaaa 3224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 25287267 - 25287314
Alignment:
Q  30 gcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||| |||||| ||||||||| || |||||||    
T  25287267 gcacaagacgacgaacaacacaacgccacacttagacaacaaaatcac 25287314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39229037 - 39228978
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| ||||| |||||||||||||||||||| |||  |||||| |||| ||||||||||    
T  39229037 aaatctaacgccgcacaagacgacgaacaacacaacaacgcactcagacaacgaaatcac 39228978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 45350445 - 45350500
Alignment:
Q  200 atgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    ||||| |||||||||| || |||| ||||||||||| |||||||||||||| ||||    
T  45350445 atgaacgaaggagaaaaaaagtttagagagaagttgaagtttctctcactagaaaa 45350500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 3394480 - 3394434
Alignment:
Q  31 cacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||    
T  3394480 cacaagacgacgaacaacacaacaccgcactcagacgatgaaatcac 3394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 9916011 - 9915941
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 241  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9916011 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 9923923 - 9923853
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagttt 241  Q
    |||||| |||||||||  |  |||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  9923923 aaaaaaagacctaaaattaaccctcctcgataaacgaaggagaaagaaagtttggagagaagttggagttt 9923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 24350737 - 24350695
Alignment:
Q  226 agagaagttggagtttctctcactaa-aaaattaggaccggct 267  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  24350737 agagaagttggagtttctctcactaaaaaaattagggccggct 24350695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 1485303 - 1485356
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||||||||||||||||| | | || |||||||| || ||||||||    
T  1485303 aacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 1485356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 6002052 - 6001999
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||| |||||||||||||||||||| | |||| |||| ||| |||||||||||    
T  6002052 aacgccgcacaagacgacgaacaacaaaccgccacactcagatgacgaaatcac 6001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 24770120 - 24770055
Alignment:
Q  173 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggag 238  Q
    |||||||||||||| ||| ||  || |||||| ||| ||||||||| |||| ||||||||||||||    
T  24770120 aaaatgacctaaaatcaccccgtctcgatgaacgaatgagaaagaaagtttagagagaagttggag 24770055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 27997099 - 27997054
Alignment:
Q  29 tgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    ||||||||| ||||||||||| || |||||||| ||||||||||||    
T  27997099 tgcacaagatgacgaacaacacaatgccgcactcagacgacgaaat 27997054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 22087193 - 22087137
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaa 218  Q
    |||||| ||||||||||||| |||||||  |||| | ||| ||||||||||||||||    
T  22087193 ttctaggtcaaaaaatgaccaaaaaccatccctcttcgataaatgaaggagaaagaa 22087137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 2174 - 2279
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  ||||||||||||||||||| ||||||||| |||||| |||||| |||||||||| || |||| |||||||||||||||||||||| |    
T  2174 tgtagaggggtgattctagatcaaaaaatgacttaaaaccactcctcctcgatgaacgaaggagaaaaaaagtttagagagaagttggagtttctctctc 2273  T
Q  249 taaaaa 254  Q
    ||||||    
T  2274 taaaaa 2279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 2042 - 2101
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  || |||||||||||||||| || ||||||||||||||| ||||||||    
T  2042 aaatcaaacgccacataagacgacgaacaacaaaatgccgcacttagacgatgaaatcac 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 72079 - 72184
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagga 261  Q
    |||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||     
T  72079 ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctcccactagaaaactaggg 72178  T
Q  262 ccggct 267  Q
    ||||||    
T  72179 ccggct 72184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 71933 - 71992
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||| | ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  71933 aaatcaaactccgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcac 71992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 1218 - 1120
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||| ||||||||||||||||||||||  ||||| |||||| |||||||||||||  ||| ||||||||||| |||||| |||||||||||| ||||    
T  1218 ttctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaaatttagagagaagttgaagtttcactcactaaaaaactagg 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 1364 - 1305
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  1364 aaatcaaacgccacacaagacgacgaacaacacaacgccgcacttagacgaagaaatcac 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 15053 - 15141
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcacta 250  Q
    |||||| ||||||||| ||||||  |||||| |||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  15053 ttctaggtcaaaaaataacctaaccccacacatcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctcacta 15141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32816 - 32875
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  32816 aaatcaaacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac 32875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 32970 - 33061
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    |||||||||||||||||||||| |||||| ||| || |||| |||||||| |||| |||||||||| ||||||||||||||| |||| ||||    
T  32970 tcaaaaaatgacctaaaaccactcctcctcgataaacgaagaagaaagaaagtttagagagaagttagagtttctctcactagaaaactagg 33061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 50673 - 50555
Alignment:
Q  149 tgtagagggctagttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcac 248  Q
    ||||||||| |  |||||| ||||||| |||||||||| ||| ||||||  ||||| ||||||||||||| |||| || ||||||||||||||||| |||    
T  50673 tgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaacgaaggagaaagaaagtttagaaagaagttggagtttctcccac 50574  T
Q  249 taaaaaattaggaccggct 267  Q
    || |||| |||| ||||||    
T  50573 tagaaaactagggccggct 50555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 50781 - 50747
Alignment:
Q  43 aacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||| |||||||||||||||||||||||||||    
T  50781 aacaacacaacgccgcacttagacgacgaaatcac 50747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 2041 - 2121
Alignment:
Q  171 aaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaa 251  Q
    |||||| ||||||||| |||| |||||  |||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  2041 aaaaaaagacctaaaaacacatctcctcaatgaatgaagaagaaagaaagttttgaaagaagttggagtttctctcactaa 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 19261 - 19348
Alignment:
Q  172 aaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattagg 260  Q
    ||||| ||| ||||||||| |||||| ||||| |||| |||||||||  ||  ||||||||||||||||||||||||||||||||||||    
T  19261 aaaaacgacataaaaccacccctcctcgatgagtgaaagagaaagaaaatta-gagagaagttggagtttctctcactaaaaaattagg 19348  T

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Target: scaffold0634 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8532 - 8473
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||    
T  8532 aaatcaaacgctgcacaagacgatgaacaatacaacgccgcacttagatgacgaaatcac 8473  T

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Target: scaffold0136 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 10111 - 10170
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||    
T  10111 aaatcaaacgccgcacaagacgacgaacaaaacaaagccgcacttagacgacgaaatcac 10170  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 255
Target Start/End: Original strand, 58301 - 58387
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaa 255  Q
    |||||||||||||||||||||| |||||| || || |||| || || |||   || |||||||||||||||||||||||||||||||    
T  58301 tcaaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaagttggagtttctctcactaaaaaa 58387  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 58167 - 58207
Alignment:
Q  37 acgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||| ||||||||||| |||||| ||||||||    
T  58167 acgacgaacaacacaacgccgcactcagacgatgaaatcac 58207  T

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Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 7591 - 7500
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaa 254  Q
    |||||| |||||||||||||||||||||  |||||| ||||||| ||||||||||||   || ||||||||  |||||||| |||||||||||    
T  7591 ttctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaagaaaacttagagagaag-cggagtttccctcactaaaaa 7500  T

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Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 10742 - 10672
Alignment:
Q  173 aaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttct 243  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| | |||| |||||||||| ||||||||    
T  10742 aaaatgacctaaaaccacctctcctcgatgaatgaaggaggaagcaagtttagagagaagttagagtttct 10672  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 25551 - 25649
Alignment:
Q  169 tcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaagttggagtttctctcactaaaaaattaggaccggct 267  Q
    |||||||||||| ||||||||| |||||| |||||| ||||||||||     ||| |||| |||||| |||||||||||||| |||| |||| ||||||    
T  25551 tcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaaatttttttagagaaaagttgaagtttctctcactagaaaactagggccggct 25649  T

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Target: scaffold0888 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 1768 - 1813
Alignment:
Q  32 acaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  1768 acaagacgacgaacaacagaacgtcgcactaagacgacgaaatcac 1813  T

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Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 12790 - 12721
Alignment:
Q  162 ttctagatcaaaaaatgacctaaaaccacacctccttgatgaatgaaggagaaagaaggttttgagagaa 231  Q
    |||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||| |||  |||||||    
T  12790 ttctaggtcaaaaaatgacctaaaaccacctctccttgatgaatcaaagagaaagaaagttaagagagaa 12721  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 66109 - 66170
Alignment:
Q  16 caaaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    |||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  66109 caaaatcagacgccacacaagacgacgaacaacataacgctgcacttagacgacaaaatcac 66170  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 71369 - 71425
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaat 74  Q
    |||||||  |||||||||| |||| ||||||| |||||||| |||||||||||||||    
T  71369 aaatcaactgctgcacaagtcgactaacaacacaacgccgcccttagacgacgaaat 71425  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36850 - 36791
Alignment:
Q  18 aaatcaaacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac 77  Q
    ||||||||||| |||||||||||| | ||||| |||||| || |||||||||| ||||||    
T  36850 aaatcaaacgccgcacaagacgactaccaacacaacgccacaattagacgacggaatcac 36791  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 93117 - 93065
Alignment:
Q  24 aacgctgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatca 76  Q
    ||||| ||||||||| || ||||||| ||||| ||||| ||||||||||||||    
T  93117 aacgccgcacaagacaacaaacaacacaacgcagcactcagacgacgaaatca 93065  T

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