View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_235 (Length: 294)
Name: NF10145A_low_235
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_235 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 255
Target Start/End: Original strand, 28907958 - 28908206
Alignment:
| Q |
7 |
ctgagatgaagcatgataagtaaacatagcaaaagatagaagttacaaatcgaaagaaaacttgtcaattgttgaacttagaaggctcacattcacagca |
106 |
Q |
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| T |
28907958 |
ctgagatgaagcatgataagtaaacatagcaaaagatagaagttacaaatcgaaagaaaacttgtcaattgttgaacttagaaggctcacaatcacagca |
28908057 |
T |
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| Q |
107 |
tgtttaattaaatttaaaaatgtgagatgnnnnnnnnnnnnntattctaacaaatttaccacatcttaaagatatgatgaaaagagtccgcaccgaaaat |
206 |
Q |
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| T |
28908058 |
tgtttaattaaatttaaaaatgtgagatgaaaaataaaaaaatattctaacaaatttaccacatcttaaagatatgatgaaaaaagtccgcactgaaaat |
28908157 |
T |
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| Q |
207 |
tataaaaacaaacttaaccaatgtatattcagtattttgtaaattgggt |
255 |
Q |
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| T |
28908158 |
tataaaaacaaacttaaccaatgtatattcagtattttgaaaattgggt |
28908206 |
T |
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