View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_241 (Length: 293)

Name: NF10145A_low_241
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_241
NF10145A_low_241
[»] scaffold0168 (1 HSPs)
scaffold0168 (5-293)||(15619-15907)
[»] chr5 (9 HSPs)
chr5 (5-293)||(26540737-26541025)
chr5 (5-171)||(203778-203943)
chr5 (5-141)||(1280335-1280471)
chr5 (5-98)||(3055482-3055575)
chr5 (5-98)||(11852715-11852808)
chr5 (235-286)||(203699-203750)
chr5 (5-98)||(8785782-8785875)
chr5 (5-61)||(27168885-27168941)
chr5 (21-79)||(22541905-22541963)
[»] chr2 (10 HSPs)
chr2 (5-293)||(34526157-34526445)
chr2 (5-293)||(22483354-22483642)
chr2 (11-293)||(22464475-22464757)
chr2 (5-291)||(33453270-33453556)
chr2 (11-293)||(35649748-35650027)
chr2 (137-228)||(39368363-39368454)
chr2 (5-107)||(19951913-19952015)
chr2 (5-67)||(13308747-13308809)
chr2 (5-98)||(12539574-12539666)
chr2 (11-98)||(34317555-34317642)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-293)||(196910-197192)
[»] chr1 (12 HSPs)
chr1 (5-293)||(21973870-21974158)
chr1 (5-293)||(17127244-17127532)
chr1 (5-98)||(25017386-25017479)
chr1 (11-98)||(9637121-9637208)
chr1 (23-98)||(48606712-48606787)
chr1 (21-107)||(26273027-26273113)
chr1 (21-98)||(30559103-30559180)
chr1 (21-74)||(35949076-35949129)
chr1 (5-98)||(52753899-52753992)
chr1 (5-64)||(30054855-30054914)
chr1 (5-73)||(14498922-14498990)
chr1 (5-98)||(32379937-32380027)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-293)||(134936-135224)
[»] chr7 (10 HSPs)
chr7 (5-293)||(26493796-26494084)
chr7 (5-288)||(27387388-27387671)
chr7 (5-293)||(19399783-19400071)
chr7 (5-293)||(38575371-38575659)
chr7 (5-119)||(45197623-45197736)
chr7 (5-98)||(23179967-23180060)
chr7 (5-89)||(18375415-18375499)
chr7 (5-80)||(9230419-9230494)
chr7 (11-98)||(43727996-43728083)
chr7 (5-98)||(8638614-8638707)
[»] chr4 (9 HSPs)
chr4 (5-293)||(27364688-27364976)
chr4 (5-293)||(55464742-55465030)
chr4 (137-228)||(20114436-20114527)
chr4 (11-119)||(42843686-42843794)
chr4 (5-98)||(31944616-31944709)
chr4 (5-99)||(12211308-12211402)
chr4 (231-293)||(45195396-45195458)
chr4 (11-98)||(4325412-4325499)
chr4 (5-80)||(53693116-53693191)
[»] chr3 (10 HSPs)
chr3 (5-293)||(31988834-31989122)
chr3 (5-293)||(53710203-53710491)
chr3 (5-293)||(24908475-24908763)
chr3 (5-280)||(43136945-43137220)
chr3 (21-263)||(37381967-37382209)
chr3 (5-98)||(15667973-15668066)
chr3 (5-98)||(51261979-51262072)
chr3 (11-95)||(3856964-3857048)
chr3 (24-79)||(43585836-43585891)
chr3 (107-143)||(49600829-49600865)
[»] chr8 (13 HSPs)
chr8 (5-293)||(30791540-30791828)
chr8 (5-293)||(21958317-21958605)
chr8 (11-172)||(16532719-16532880)
chr8 (137-228)||(10396461-10396552)
chr8 (11-97)||(27190772-27190858)
chr8 (12-80)||(9256407-9256475)
chr8 (21-80)||(13152492-13152551)
chr8 (11-80)||(14446850-14446919)
chr8 (21-98)||(24333714-24333791)
chr8 (5-73)||(10467789-10467857)
chr8 (5-98)||(28846621-28846711)
chr8 (11-80)||(42446936-42447005)
chr8 (11-59)||(10014523-10014571)
[»] chr6 (8 HSPs)
chr6 (5-286)||(24074224-24074505)
chr6 (5-98)||(12180607-12180700)
chr6 (11-94)||(11970964-11971047)
chr6 (5-98)||(25340445-25340538)
chr6 (11-59)||(3050902-3050950)
chr6 (5-78)||(25599172-25599245)
chr6 (5-98)||(32442056-32442146)
chr6 (11-51)||(1296556-1296596)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-293)||(214243-214531)
[»] scaffold0007 (1 HSPs)
scaffold0007 (5-293)||(259723-260011)
[»] scaffold0198 (1 HSPs)
scaffold0198 (5-64)||(1430-1489)
[»] scaffold0178 (1 HSPs)
scaffold0178 (5-98)||(17740-17833)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-64)||(435450-435491)


Alignment Details
Target: scaffold0168 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 15907 - 15619
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15907 tcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 15808  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15807 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 15708  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15707 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 15619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 26540737 - 26541025
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26540737 tcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 26540836  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26540837 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 26540936  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26540937 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 26541025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 203943 - 203778
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |  || ||||||| |||||||||| ||||    
T  203943 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattttat-acacattgttgatcttgttgcacaat 203845  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatca 171  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  203844 ttagtcttgataattttcattgctgaaaaagctctttcaacggatgttgtcgataccggcaatatca 203778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 1280471 - 1280335
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||    
T  1280471 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaaatcattgaaccacacattgttgatcttattgcgcaat 1280372  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctcttt 141  Q
    |||| ||||||||||||||||| || |||||||||||    
T  1280371 ttagacttgataatcttcattgttgaaaaagctcttt 1280335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 3055575 - 3055482
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||| |||||| ||| ||| ||| |||||    
T  3055575 tcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccacacatcgttgatcatgttg 3055482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 11852808 - 11852715
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||| |||  || |||||||||    
T  11852808 tcgaataatatcaacatcatcaagtgagttaaatatctcccgttcggtgtaacatatcatcaagtcattgaaccacacatctttcatcttgttg 11852715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 203750 - 203699
Alignment:
Q  235 tcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcctttt 286  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  203750 tcatagccaaactttgaacatcttcacaagaagaaaaagaagcaagcctttt 203699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 8785875 - 8785782
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||| ||||||| ||| |||||||||||||||| | ||||| |||| ||||| ||||| |||||| ||| ||| |||||||||    
T  8785875 tcgaataatatcaatatcatcaactgaattgaatatctcccgcttgatgtaatatattatcaagtcattgaaccacacatcgttgatcttgttg 8785782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 27168885 - 27168941
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatat 61  Q
    ||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  27168885 tcgaataatatcaacattatcaagtgacttgaatatctcccgctcggtgtaacatat 27168941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 22541963 - 22541905
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaacca 79  Q
    ||||| ||||| |||||||||| ||| ||| |||||||||||||||| ||||| |||||    
T  22541963 tcatcgagtgacttgaatatcttccgttcgatgtaacatatcatcaagtcattcaacca 22541905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 34526445 - 34526157
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34526445 tcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 34526346  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34526345 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 34526246  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34526245 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 34526157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 22483642 - 22483354
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22483642 tcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaagtcatttaaccattcattgttaatcttgttgcgcaat 22483543  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22483542 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagactaatggaa 22483443  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22483442 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 22483354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 293
Target Start/End: Complemental strand, 22464757 - 22464475
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22464757 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 22464658  T
Q  111 ttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaatacca 210  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22464657 ttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgcagaccaatggaaatacca 22464558  T
Q  211 aatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22464557 aatgtttctcagtttgaaccatcttcataaccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 22464475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 291
Target Start/End: Original strand, 33453270 - 33453556
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaa-catatcatcaaatcatttaaccactcattgttaatcttgttgcgcaa 103  Q
    ||||| ||||||||  ||||||||||| || ||||||||||||||||||||| ||||| || || ||||| | |||| ||| ||| |||||||||||||     
T  33453270 tcgaataatatcaacatcatcaagtgacttaaatatctcccgctcggtgtaaacatatgatgaagtcattga-ccacacatcgttgatcttgttgcgcag 33453368  T
Q  104 tttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatgga 203  Q
    ||||| ||||||||||||||||| || ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||  |    
T  33453369 tttagacttgataatcttcattgttgaaaaagctctttcagcggatgatgtcaacaccggcaatatcaaagccaactcaatgagtttgtagacaaataaa 33453468  T
Q  204 aataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcactt 291  Q
    |||| |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33453469 aataacaaatgtttctcggtttgaacaatcttcataaccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcactt 33453556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 293
Target Start/End: Original strand, 35649748 - 35650027
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 110  Q
    ||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||| || ||| ||| ||||| | ||  |||||||||    
T  35649748 aatatcaacatcatcaaatgacttgaatatctcccgctcggtgtaacatatcatcaagtcattgaacaacacatcgttgatcttctggc--aatttagtc 35649845  T
Q  111 ttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaatacca 210  Q
    || |||||||||||||||| |||||||||||||||||||| |||| ||||||  |||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  35649846 tttataatcttcattgctgaaaaagctctttcaacggatgctgtcaacaccgaaaatatcaaagccaactcaataagtttctagaccaatgaaaacacca 35649945  T
Q  211 aatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  35649946 aatgtttctcagtttgaaccatcttcatagccaaactttgaac-tcttctcaagaagaaaaggaggcatgccttttcacttga 35650027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 39368454 - 39368363
Alignment:
Q  137 tctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaataccaaatgtttctcagtttgaa 228  Q
    |||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  39368454 tctttcaacggatgctctcaacaccgacaatatcaaagccaactcaatgagtttgtagaccaatgaaaataccaaatgtttctcggtttgaa 39368363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 19951913 - 19952015
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||| ||||| |||| ||||||| |||| ||||| |||||  ||| |||||||||||||||||||    
T  19951913 tcgaataatatcaacatcatcaagtgacttgaatatctctcgctcagtgtgacatatcgtcaagtcattgaaccatacatcgttaatcttgttgcgcaat 19952012  T
Q  105 tta 107  Q
    |||    
T  19952013 tta 19952015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 13308809 - 13308747
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaa 67  Q
    ||||| ||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  13308809 tcgaataatatcaacatcatcaagtgacttgaatatctctcgctcggtgtaacatatcatcaa 13308747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 12539666 - 12539574
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| ||||||||||   ||||||| |||||||||||||| ||||| |||||| ||||||| |||||||||    
T  12539666 tcgaataatatcaacatcatcaagtgacttgaatatcttatgctcggt-taacatatcatcaagtcattgaaccacgcattgttgatcttgttg 12539574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 34317555 - 34317642
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||  |||| |||||| |||||||||||   ||||||||||||||||||||| ||||| |||||| |||  || |||||||||    
T  34317555 aatatcaacatcatgaagtgacttgaatatctcttactcggtgtaacatatcatcaagtcattgaaccacacatcattgatcttgttg 34317642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 293
Target Start/End: Complemental strand, 197192 - 196910
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  197192 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaattcatttaaccactcattgttaatcttgttgcgcaatttagtc 197093  T
Q  111 ttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaatacca 210  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  197092 ttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaatacca 196993  T
Q  211 aatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  196992 aatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 196910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 21973870 - 21974158
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21973870 tcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcagtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcacaat 21973969  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21973970 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 21974069  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974070 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 21974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 17127532 - 17127244
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  |||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  17127532 tcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 17127433  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17127432 ttagtcttgataatcttcattgttgaaaaagctctttcaacggaagttgtcgacactggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 17127333  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17127332 ataccaaatgtttctcaggttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcattttcacttga 17127244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25017479 - 25017386
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||| ||| ||| |||||||||    
T  25017479 tcgaataatatcaacatcatcaagtgatttgaatatctctcgctcggtgtaagatatcatcaagtcattgaaccacacatcgttgatcttgttg 25017386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 9637208 - 9637121
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||| |||  || |||||||||    
T  9637208 aatatcaacatcatcaagtgacttgaatatcacccgctcggtgtaacatatcatcaagtcattgaaccacgcatcattgatcttgttg 9637121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 48606712 - 48606787
Alignment:
Q  23 atcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||| |||||||||    
T  48606712 atcaagttacttgaatatctcccgctcggtgtaacatatcatcaagtcattgaaccacacatcgttgatcttgttg 48606787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 26273027 - 26273113
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaattta 107  Q
    |||||| |||| |||||||||||| ||||| |||||||||||||||||||||| ||| || ||| ||| || |||||||||||||||    
T  26273027 tcatcacgtgacttgaatatctcctgctcgatgtaacatatcatcaaatcattgaacaacacatcgttgattttgttgcgcaattta 26273113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 30559103 - 30559180
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||  |||||| ||| ||| |||||||||    
T  30559103 tcatcaagtgacttgaatatctctcgctcggtgtaacatatcatcaagtcatagaaccacacatcgttgatcttgttg 30559180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 35949076 - 35949129
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcattt 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  35949076 tcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattt 35949129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 52753899 - 52753992
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||| ||| |||||||||||||| ||| |||||||||||||||| ||||| |||||| ||| ||| ||| |||||    
T  52753899 tcgaataatatcaacatcatcaaatgacttgaatatctcccgttcgatgtaacatatcatcaagtcattgaaccacacatcgttgatcatgttg 52753992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 30054914 - 30054855
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcat 64  Q
    ||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  30054914 tcgaataatgtcaatatgatcaagtgacttgaatatctcccgctcggtgtaacatatcat 30054855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 14498990 - 14498922
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatt 73  Q
    ||||| ||||||||  ||||||| ||| |||||||||||||||||| ||||| |||||||||| |||||    
T  14498990 tcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaagatatcatcaagtcatt 14498922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 32379937 - 32380027
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| |||||||||||||| | ||||||||||   ||||| ||||| |||||| ||| ||| |||||||||    
T  32379937 tcgaataatatcaacatcatcaagtgaattgaatatctcccgtttggtgtaacat---atcaagtcattgaaccacacatcgttgatcttgttg 32380027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 134936 - 135224
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||    
T  134936 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcatttaaccacacattgttcatcttgttgcacaat 135035  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  135036 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgttgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 135135  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  135136 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 26493796 - 26494084
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  26493796 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacgtatcatcaagtcatttaaccacacattgttcatcttgttgcgcaat 26493895  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26493896 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagtcaactcaatgagtttgtagaccaatggaa 26493995  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26493996 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 26494084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 5 - 288
Target Start/End: Original strand, 27387388 - 27387671
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  27387388 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 27387487  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27387488 ttagtcttaataatcttcattgctgaaaaagctctttcaacggaagctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 27387587  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttca 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27387588 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttca 27387671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 19400071 - 19399783
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  |||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  19400071 tcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 19399972  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19399971 ttagtcttgataatcttcattgttgaaaaagctctttcaacggaagttgtcgacactggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 19399872  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19399871 ataccaaatgtttctcaggttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcattttcacttga 19399783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 38575371 - 38575659
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| || |||||||||||||||||||||||||||||||| || || |||||| ||||||| || ||||||||||||    
T  38575371 tcgaataatatcaacatcatcaagtgactttaatatctcccgctcggtgtaacatatcatcaagtcgttcaaccacccattgttgatattgttgcgcaat 38575470  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||| ||||||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38575471 ttagtcttaataatcttcattgttgaaaaagctctttcaacggaagctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 38575570  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38575571 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaaacatgccttttcatttga 38575659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 45197736 - 45197623
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  || |||||||| |||||||||||| ||||| || || |||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  45197736 tcgaacaatatcaacatcgtcaagtgacttgaatatctcctgctcgatg-aatatatcatcaagtcattgaaccacacattgttgatcttgttgcgcaat 45197638  T
Q  105 ttagtcttgataatc 119  Q
    ||| |||||||||||    
T  45197637 ttaatcttgataatc 45197623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 23179967 - 23180060
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  | ||||||||  ||||||||||| ||||||||||||||||||||||| | ||| || ||| ||| ||| |||||||||    
T  23179967 tcgaataatatcaacattatcaagtgccttgaatatctctcgctcggtgtaacatatcatcaagttattgaaacacacatcgttgatcttgttg 23180060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 18375499 - 18375415
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgtta 89  Q
    ||||| ||||||||  | ||| |||||||||||||||||||||||  ||||| |||||||||| ||||| |||||| ||| ||||    
T  18375499 tcgaataatatcaacattatctagtgatttgaatatctcccgctccatgtaatatatcatcaagtcattgaaccacacatcgtta 18375415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 9230494 - 9230419
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    ||||| ||||||||  ||||||| ||| |||| ||||||||||||  |||||||||||||||| ||||| ||||||    
T  9230494 tcgaataatatcaacatcatcaaatgacttgagtatctcccgctctatgtaacatatcatcaagtcattgaaccac 9230419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 43728083 - 43727996
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||  ||||||| ||| |||||||||||||| ||| | |||||||||||||| ||||| |||||| ||| ||| ||| |||||    
T  43728083 aatatcaacatcatcaactgacttgaatatctcccgttcgatataacatatcatcaagtcattgaaccacacatcgttgatcatgttg 43727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 8638707 - 8638614
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| |||||| || ||||||| ||| |||||||||||  | ||||| |||||||||||||| | ||| |||||| | | ||| |||||||||    
T  8638707 tcgaataatatcgatatcatcaaatgacttgaatatctcttgttcggtataacatatcatcaagtaattaaaccacacgtcgttgatcttgttg 8638614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 27364976 - 27364688
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||    
T  27364976 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcatttaaccacacactgttgatcttgttgcgcaat 27364877  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||    
T  27364876 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgttgtcgacactgacaatatcaaagccaactcaatgagtttgtagaccaatgaaa 27364777  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27364776 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 27364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 55464742 - 55465030
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| |||| | |||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  55464742 tcgaataatatcaacatcatcaagtgacttgattttctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 55464841  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  55464842 ttagtcttgataatcttcattgctgaaaaagctctttcaacggaagttgttgacaccgacaatatcaaagccaacttaatgagtttgtagaccaatggaa 55464941  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55464942 ttaccaaatgttactcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcattccttttcacttga 55465030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 20114527 - 20114436
Alignment:
Q  137 tctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaataccaaatgtttctcagtttgaa 228  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  20114527 tctttcaacggatgttgtcaacaccgacaatatcaaagccaactcaatgagtttgtagaccaatgaaaatatcaaatgtttctcagtttgaa 20114436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 42843794 - 42843686
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 110  Q
    ||||||||  ||||||||||| ||||||||||| | |||  | |||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||    
T  42843794 aatatcaacatcatcaagtgacttgaatatctctcactcaatataacatatcatcaactcattaaaccacacattgttgatcttgttgcacaatttagtc 42843695  T
Q  111 ttgataatc 119  Q
    || ||||||    
T  42843694 ttaataatc 42843686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 31944709 - 31944616
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| ||||||||||| | ||||||||||||||||||||| ||||| |||||| ||| ||| |||||||||    
T  31944709 tcgaataatatcaacatcatcaagtgacttgaatatctcacactcggtgtaacatatcatcaagtcattgaaccacacatcgttgatcttgttg 31944616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 12211308 - 12211402
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgc 99  Q
    ||||| ||||||||  ||||||| ||| |||||||||||| | |||||||||||||||||||| ||||| |||||| ||| ||| ||||||||||    
T  12211308 tcgaataatatcaacatcatcaaatgacttgaatatctcctgttcggtgtaacatatcatcaagtcattgaaccacacatcgttgatcttgttgc 12211402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 45195458 - 45195396
Alignment:
Q  231 atcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||    
T  45195458 atcttcatagccaaactttgaacatcttcacaaaaagagaaggaagcctgtcttttcacttga 45195396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 4325499 - 4325412
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||  ||||||||||  |||| |||||||| ||||||||||||||||||||| ||||| |||||| ||| ||| |||||||||    
T  4325499 aatatcaacatcatcaagtgggttgattatctcccactcggtgtaacatatcatcaagtcattgaaccacacatcgttgatcttgttg 4325412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 53693116 - 53693191
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    ||||| ||||||||  ||||||||||  |||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  53693116 tcgaataatatcaacatcatcaagtgccttgattatctcccgctcgatgtaacatatcatcaagtcattgaaccac 53693191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 31989122 - 31988834
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  31989122 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 31989023  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31989022 ttagtcttaataatcttcattgctgaaaaagctctttcaacggaagctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 31988923  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31988922 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcatttga 31988834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 53710491 - 53710203
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||  ||||||| |||||||||||||||    
T  53710491 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacagatcatcaagtcattcaaccatccattgttgatcttgttgcgcaat 53710392  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53710391 ttagtcttgataatcttcattgctgaaaaagctctttcaacggatgctgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 53710292  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53710291 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcatttga 53710203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 24908475 - 24908763
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  || ||||| || |||||||||||| ||| |||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  24908475 tcgaataatatcaacatcttcaagcgacttgaatatctcctgcttggtgtaacatatcatcaagtcattcaaccacacattgttgatcttgttgcgcaat 24908574  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||| ||||||||||||||||||||| |||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  24908575 ttactcttgataatcttcattgctgaaaaagctctttcaacgaaagttgtcgacacaagcaatatcaaagccaactcaatgagtttgtaaaccaatggaa 24908674  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24908675 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcattttcacttga 24908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 5 - 280
Target Start/End: Complemental strand, 43137220 - 43136945
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||  ||| ||| |||||||||||||||    
T  43137220 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattgaaccatacatcgttgatcttgttgcgcaat 43137121  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||  ||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  43137120 ttagagttgataatcttcattgctaaaaaagctctttcaacggatgttgtcgatacaggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 43137021  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatg 280  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43137020 ataccaaatgtttctcgttttgaaccatcttcataaccaaactttgaacatcttcacaagaagaaaaggaaacatg 43136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 263
Target Start/End: Original strand, 37381967 - 37382209
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtcttgataatct 120  Q
    ||||||| ||| |||||||||||  |||| |||||| |||||||| | |||||||||||| ||| ||| ||||||||||| ||||||| |||||||||||    
T  37381967 tcatcaaatgacttgaatatctcatgctcagtgtaatatatcatcgagtcatttaaccacacatcgttgatcttgttgcgaaatttagacttgataatct 37382066  T
Q  121 tcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaataccaaatgtttctc 220  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  37382067 tcattgctgaaaaagctctttcaacggatgttgtcgacaccgacaataccaaagccaactcaatgagtttgtagaccaatgaaaataccaaatgattctc 37382166  T
Q  221 agtttgaaccatcttcatagccaaactttgaacatcttcacaa 263  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  37382167 agtttgaaccatcttcatagccgaactttgaacatcttcacaa 37382209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 15668066 - 15667973
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||| | ||| |||||| |||  || |||||||||    
T  15668066 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtataacatatcatcaagttattgaaccacacatccttgatcttgttg 15667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 51262072 - 51261979
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| |||||||||| |||||  ||||||||||||||||| |||||  ||||| | | ||| |||||||||    
T  51262072 tcgaataatatcaacatcatcaagtgacttgaatatcttccgcttagtgtaacatatcatcaattcattgtaccacacttcgttgatcttgttg 51261979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 3856964 - 3857048
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttg 95  Q
    ||||||||  ||||||| ||| ||||||||||||| ||| | ||||||| ||||||| |||||||||||| ||| ||| ||||||    
T  3856964 aatatcaacatcatcaaatgacttgaatatctcccactctgagtaacatgtcatcaagtcatttaaccacacatcgttgatcttg 3857048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 43585891 - 43585836
Alignment:
Q  24 tcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaacca 79  Q
    |||||| | ||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  43585891 tcaagtaacttggatatctcccgctcggtgtaacatatcatcaagtcattcaacca 43585836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 49600829 - 49600865
Alignment:
Q  107 agtcttgataatcttcattgctgtaaaagctctttca 143  Q
    |||||||||||||||||| |||| |||||||||||||    
T  49600829 agtcttgataatcttcatagctgaaaaagctctttca 49600865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 30791540 - 30791828
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||    
T  30791540 tcgaataatatcaatgtcatcaagtgacttgaatatctcccgctcggtgtaacatatcatcaagtcattgaaccactcattcttgatcttgttgcgcaat 30791639  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||| ||||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  30791640 ttaatcttgataatcttcattgctgaaaaagctctttcaatggatgcagtcgacaccggcaatatcaaagccaactcaattaatttgtagaccaatggaa 30791739  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30791740 atgccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcaaaagaagaaaaagaagcatgccttttcacttga 30791828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 21958605 - 21958317
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||| |||    
T  21958605 tcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaacatatcatcaagtcattcaaccacatattgttgatcttgttgcgtaat 21958506  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21958505 ttagtcttgataatcttcattggtgaaaaagctctttcaacggaagttgtcgacactggcaatatcaaagccaactcaatgattttgtagaccaatggaa 21958406  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21958405 ataccaaatgtttcttagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcattttcacttga 21958317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 16532719 - 16532880
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaatttagtc 110  Q
    ||||||||  ||||||||||| ||||||||||| | || ||| |||||||||||||| ||||| |||||| ||| ||| ||||||||| | |||||||||    
T  16532719 aatatcaacatcatcaagtgacttgaatatctctcacttggtataacatatcatcaagtcattgaaccacacatcgttgatcttgttgtgtaatttagtc 16532818  T
Q  111 ttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaa 172  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||  |||||||||    
T  16532819 ttgataatcttcattgctgaaaaagctctttacacggatgttgtcgacaccaacaatatcaa 16532880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 10396461 - 10396552
Alignment:
Q  137 tctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaaataccaaatgtttctcagtttgaa 228  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10396461 tcttccaacggatgttgtcaacaccgacaatatcaaagccaactcaatgagtttgtagaccaatggaaataccaaatgtttctcagtttgaa 10396552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 27190858 - 27190772
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgtt 97  Q
    ||||||||  ||||||||||| |||||||||||||||| |||| ||||||||||||| ||||| |||||| ||| ||| ||||||||    
T  27190858 aatatcaacatcatcaagtgacttgaatatctcccgctaggtgcaacatatcatcaagtcattgaaccacacatcgttgatcttgtt 27190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 9256475 - 9256407
Alignment:
Q  12 atatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    |||||||  ||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  9256475 atatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacatatcatcaagtcattaaaccac 9256407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 13152492 - 13152551
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  13152492 tcatcaaatgacttgaatatctcccgctcgatgtaacatatcatcaagtcattgaaccac 13152551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 14446919 - 14446850
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    ||||||||  ||||||||||| ||||||||||| | || |||||||||||||||||| ||||| ||||||    
T  14446919 aatatcaacatcatcaagtgacttgaatatctctctcttggtgtaacatatcatcaagtcattgaaccac 14446850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 24333791 - 24333714
Alignment:
Q  21 tcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || ||  ||| ||| |||||||||    
T  24333791 tcatcaagtgacttgaatatctcccgctcagtgtaacatatcataaagtcattgaatcatacatcgttgatcttgttg 24333714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 10467857 - 10467789
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatt 73  Q
    ||||| ||||||||  ||||||| ||| |||| ||||||||||||| |||||||||||||||| |||||    
T  10467857 tcgaataatatcaacatcatcaaatgacttgattatctcccgctcgatgtaacatatcatcaagtcatt 10467789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 28846711 - 28846621
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||| |||   | |||||||| ||||| |||||| ||| ||| |||||||||    
T  28846711 tcgaataatatcaacatcatcaagtgacttgaatatctcccgctcgatgt---acatcatcaagtcattgaaccacacatcgttgatcttgttg 28846621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 42447005 - 42446936
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccac 80  Q
    ||||| || |||||||||||| |||||||||| ||||||| |||||||||| ||||  ||||| ||||||    
T  42447005 aatataaacgtcatcaagtgacttgaatatcttccgctcgatgtaacatataatcacgtcattcaaccac 42446936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 10014523 - 10014571
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 59  Q
    ||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  10014523 aatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 10014571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 24074505 - 24074224
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||| | ||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  24074505 tcgaataatatcaacatcatcaagtaacttgaatatctccccctcggtgtaacatatcatcaagtcattttaccacacattgttgatcttgttgcgcaat 24074406  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24074405 ttagtcttcacaatcttcattgctgaaaaagctctttaaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 24074306  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcctttt 286  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  24074305 ataccaaatgtttctcagtttgaaccatctacatagtcaaactttgaacatctacacaagaagaaaaggaagcatgcctttt 24074224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 12180607 - 12180700
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||   |||||||||| |||||| |||||| ||||||||||||||||||||| ||||| |||||| || |||| |||||||||    
T  12180607 tcgaataatatcaacaacatcaagtgacttgaatttctcccactcggtgtaacatatcatcaagtcattgaaccacacaatgttgatcttgttg 12180700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 11971047 - 11970964
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatctt 94  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||| ||||| ||||| |||||| ||| ||| |||||    
T  11971047 aatatcaacatcatcaagtgacttgaatatcttccgctcggtgtaacatatgatcaagtcattgaaccacacatcgttgatctt 11970964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25340538 - 25340445
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||||||||||| || ||||||| || || |||||||||||||||||||||| |||| ||| |||  || |||||||||    
T  25340538 tcgaataatatcaacatcatcaagtgacttaaatatcttccactgggtgtaacatatcatcaaatcacttaatcacacatcattgatcttgttg 25340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 3050950 - 3050902
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 59  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  3050950 aatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 3050902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25599245 - 25599172
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaacc 78  Q
    ||||| ||||||||  ||||||||||| |||| |||||||| |||| ||||||||| |||||| ||||| ||||    
T  25599245 tcgaataatatcaacatcatcaagtgacttgattatctcccactcgatgtaacataccatcaagtcattgaacc 25599172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 32442056 - 32442146
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  |||||||||||||  | ||||| ||||||| ||||||||||||| || ||||| |||||| ||| ||||||| |||||    
T  32442056 tcgaataatatcaacatcatcaagtgatt--attatcttccgctcgatgtaacatatcat-aagtcattgaaccacacatcgttaatcatgttg 32442146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 1296596 - 1296556
Alignment:
Q  11 aatatcaatgtcatcaagtgatttgaatatctcccgctcgg 51  Q
    ||||| ||| ||||||||||| |||||||||||||||||||    
T  1296596 aatattaatatcatcaagtgacttgaatatctcccgctcgg 1296556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 293
Target Start/End: Original strand, 214243 - 214531
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||  ||||||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||| |||    
T  214243 tcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaacatatcatcaagtcattcaaccacatattgttgatcttgttgcgtaat 214342  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  214343 ttagtcttgataatcttcattggtgaaaaagctctttcaacggaagttgtcgacactggcaatatcaaagccaactcaatgattttgtagaccaatggaa 214442  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  214443 ataccaaatgtttcttagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgcattttcacttga 214531  T

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Target: scaffold0007 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 260011 - 259723
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttgcgcaat 104  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  260011 tcgaataatatcaatgtcatcaagtgacttgaatatatcccgctcgatgtaacatatcatcaagtcattgaaccactcattgttgatcttgttgcgcaat 259912  T
Q  105 ttagtcttgataatcttcattgctgtaaaagctctttcaacggatgttgtcgacaccggcaatatcaaagccaactcaatgagtttgtagaccaatggaa 204  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||||  ||    
T  259911 ttagtcttgataatcttcattgctgaaaaaactctttcaacggatgcagtcgacaccggcaatatcaaagccaactcaattaatttgtagaccaataaaa 259812  T
Q  205 ataccaaatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaggaagcatgccttttcacttga 293  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  259811 atgccagatgtttctcagtttgaaccatcttcatagccaaactttgaacatcttcacaagaagaaaaagaagcatgtcttttcacttga 259723  T

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Target: scaffold0198 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 1489 - 1430
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcat 64  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1489 tcgaataatatcaacatcatcaagtgatttgaatatctcccgctcggtgtaacatatcat 1430  T

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Target: scaffold0178 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 17833 - 17740
Alignment:
Q  5 tcgaagaatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacatatcatcaaatcatttaaccactcattgttaatcttgttg 98  Q
    ||||| ||||||||  ||| ||||||| || ||||||||||||||| |||||| ||||||||| ||||| |||||| ||| ||| |||||||||    
T  17833 tcgaataatatcaacatcagcaagtgacttaaatatctcccgctcgatgtaacgtatcatcaagtcattgaaccacacatcgttgatcttgttg 17740  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 435450 - 435491
Alignment:
Q  23 atcaagtgatttgaatatctcccgctcggtgtaacatatcat 64  Q
    ||||||||| |||||||||| |||||||||||||||||||||    
T  435450 atcaagtgacttgaatatcttccgctcggtgtaacatatcat 435491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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