View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_266 (Length: 285)
Name: NF10145A_low_266
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10145A_low_266 |
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Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 3 - 276
Target Start/End: Complemental strand, 5744329 - 5744056
Alignment:
Q |
3 |
acaaaaatcatttgtttcattgtcattttcaatagataataaaacactagaaggaaaaattggaaagatgagagtatgtatcaatatataaactatttct |
102 |
Q |
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T |
5744329 |
acaaaaatcatttgtttcattgtcattttcaatagataataaaacactagaaggaaaaattggaaagatgagagtatgtatcaatatataaactatttct |
5744230 |
T |
 |
Q |
103 |
ctcttgctctacttatagaagagatcttcaaaggatggtaacataaggcacatgaaatttagtttgtatcatgtgaggttcatgcatacacatatgtatg |
202 |
Q |
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T |
5744229 |
ctcttgctctacttatagaagagatcttcaaaggatggtaacataaggcacatgaaatttagtttgtatcatgtgaggttcatgcatacacatatgtatg |
5744130 |
T |
 |
Q |
203 |
cgtaagtgttgcatgnnnnnnnnagcacaaaatagtaaaattctcgtgcattcgcatattgaggcgagaataat |
276 |
Q |
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T |
5744129 |
cgtaagtgttgcatgttttttttagcacaaaatagtaaaattctcgtgcattcgcatattgaggcgagaataat |
5744056 |
T |
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Alignment Overview ]
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