View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_283 (Length: 278)
Name: NF10145A_low_283
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_283 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 28758578 - 28758848
Alignment:
| Q |
1 |
tcatcatcaacataagaatattgtgaattggactctctaagtatcctacaaagatctctccttttttccctcatagcctgaacaattttctcagcagttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28758578 |
tcatcatcaacataagaatattgtgaattggactctctaagtatcctacaaagatctctccttttttccctcatagcctgaacaattttctcagcagttt |
28758677 |
T |
|
| Q |
101 |
ccaaatcattaagatcaacataagcagcaacaagtgaatgcaaagtagtcatacacaaaggtatattcagctcaagaatcctctccaacacaaacacaag |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
28758678 |
ccaaatcattaaaatcaacataagcagcaacaagtgaatgcaaagtagtcatacacaaaggtatattcagctgaagaatcctctccaacacaaacacaag |
28758777 |
T |
|
| Q |
201 |
caaatcttttctaccatttccacaacaaagcttcataacaatattataactcaaagaatcaggcacaacac |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28758778 |
caaatcttttctaccatttccacaacaaagcttcataacaatattataactcaaagaatcaggcacaacac |
28758848 |
T |
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