View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_305 (Length: 270)
Name: NF10145A_low_305
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_305 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 9 - 270
Target Start/End: Complemental strand, 33943842 - 33943576
Alignment:
| Q |
9 |
tcgagttttagtaaatatcctctgagtggacaagaattcacaaatattctttcaaaactgagacttcacacttgattggtggtaggagtgttaatatcat |
108 |
Q |
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| T |
33943842 |
tcgagttttagtaaatatcctctgagtggacaagaattcacaaatattctttcaaaactgagacttcacacttgattggtggtaggagtgttaatatcat |
33943743 |
T |
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| Q |
109 |
ttcaannnnnnnaaacatgtcatctacatcaaaccaaaccgcgtataatattatatttggagatgatgttcttttttgctttaaacacagttcaaaatgc |
208 |
Q |
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| T |
33943742 |
ttcaatttttttaaacgtgtcatctacatcaaaccaaaccgcgtataattttatatttggagatgatgttcttttttgctttaaacacagttcaaaatgc |
33943643 |
T |
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| Q |
209 |
acaacaaacacttctaattagtggc-----atatgatatgtttcaagatgggttttattgttaatga |
270 |
Q |
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| T |
33943642 |
acaacaaacacttctaattagtggcatataatatgatatgtttcaagatgggttttattgttcatga |
33943576 |
T |
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