View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_312 (Length: 267)
Name: NF10145A_low_312
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_312 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 7801912 - 7802150
Alignment:
| Q |
15 |
tatggagtttgagtctcaattggtgcaacatctaaaggaatttattacacaagaaagtaagtatatgcttgatcttgaaaaaacaacaatatgtgaagaa |
114 |
Q |
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| T |
7801912 |
tatggagtttgagtctcaattggtgcaacatctaaaggaatttattacacaagaaagtaagtatatgtttgatcttgaaaaaacaacaaaatgtgaagaa |
7802011 |
T |
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| Q |
115 |
gatcgtgatgatgaagaaaaatctatatctttgtcatgtgcatctttgaattcaattcaatcactggatatggttgaaggaattgaaaatgagataaagg |
214 |
Q |
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| T |
7802012 |
gatggtgatgatgaagaaaaatctatatctttgtcatgtgcatctttgaattcaattcaatcactggatatggttgaaggaattgaaaatgagataaagg |
7802111 |
T |
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| Q |
215 |
ttatagataaggcattggaaaaaggtgtagtgtatatgc |
253 |
Q |
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| T |
7802112 |
ttatagataaggcattggaaaaaggtgtagtgtatatgc |
7802150 |
T |
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