View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_315 (Length: 266)
Name: NF10145A_low_315
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_315 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 484022 - 484264
Alignment:
| Q |
8 |
cagttatcaaattagccatgtatcttttccaaatcatcgtaatttcttctgaggggtttatgctcaatgaccggtcaaacttaatcgatccaatttgaaa |
107 |
Q |
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| T |
484022 |
cagttataaaattagccatgtatcttttccaaatcatcgtaatttcttctgaggggtttatgctcaatgaccagtcaaacttaatcgatccaatttgaaa |
484121 |
T |
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| Q |
108 |
aatagaatgctgacattgcagcgactgagactctgtatacacgcaacttaatttaaactagaaggaacaaaaatttgatcaatcaatgcagcaaagtcac |
207 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
484122 |
aatagaatgctgacattgcagcgagtgagactctgtatacacacaacttaatttaaactagaaggaacaaaaatttgatcaatcaatgcagcaaagtcac |
484221 |
T |
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| Q |
208 |
aaatattgaaaagaacgaaatacaacacaaccagaggtctata |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
484222 |
aaatattgaaaagaacgaaatacaacacaaccagaggtctata |
484264 |
T |
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