View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_323 (Length: 264)
Name: NF10145A_low_323
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_323 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 4 - 264
Target Start/End: Complemental strand, 14351414 - 14351151
Alignment:
| Q |
4 |
agtttcgtgttggcaaagaggattaatgatttacaaaacaaaacactaactgatttataagtcactattttccttgatggaaacattg---ggggagtct |
100 |
Q |
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| T |
14351414 |
agtttcgtgttggcaaagaggattaatgatttacaaaacaaaacactaactgatttataagtcactattttccttgatggaaacattgttgggggagtct |
14351315 |
T |
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| Q |
101 |
cttatattggaattcatgagaaaagttctagaaaccgctcttataatcctctcaaggtgggccctatcacattaaaatttaagagtaatgaaaaccgatt |
200 |
Q |
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| T |
14351314 |
cttatattggaattcatgagaaaagttctagaaaccgctcttataatcctctcaaggtgggcactatcacattaaaatttaagagtaatgaaaaccgatt |
14351215 |
T |
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| Q |
201 |
tcctaaaagcaaggatgttgttagcaattttttggttcttttactgcataaatgttgtcagtga |
264 |
Q |
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| T |
14351214 |
tcctaaaagcaaggatgttgttagcaattttttggttcttttactgcataaatgttgtcagtga |
14351151 |
T |
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