View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_33 (Length: 431)

Name: NF10145A_low_33
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_33
NF10145A_low_33
[»] chr4 (45 HSPs)
chr4 (71-382)||(38157020-38157332)
chr4 (71-431)||(55017691-55018047)
chr4 (268-379)||(42978864-42978975)
chr4 (246-382)||(33607468-33607604)
chr4 (268-379)||(42889755-42889866)
chr4 (304-379)||(42977201-42977276)
chr4 (307-382)||(54534978-54535053)
chr4 (304-379)||(55948934-55949009)
chr4 (246-379)||(21354699-21354833)
chr4 (246-379)||(19995977-19996110)
chr4 (246-379)||(44251608-44251741)
chr4 (307-379)||(48711861-48711933)
chr4 (303-379)||(55019337-55019413)
chr4 (304-379)||(19994501-19994576)
chr4 (304-379)||(48713443-48713518)
chr4 (292-379)||(54123514-54123601)
chr4 (304-380)||(22309119-22309195)
chr4 (307-379)||(32082617-32082689)
chr4 (304-379)||(10337107-10337182)
chr4 (246-379)||(33609265-33609400)
chr4 (320-379)||(18597851-18597910)
chr4 (304-379)||(24919055-24919130)
chr4 (304-379)||(44253173-44253248)
chr4 (304-374)||(9561854-9561924)
chr4 (305-382)||(54536678-54536756)
chr4 (307-379)||(4906132-4906204)
chr4 (304-379)||(18597635-18597710)
chr4 (292-379)||(22307674-22307761)
chr4 (328-379)||(23702400-23702451)
chr4 (275-380)||(23800782-23800884)
chr4 (331-381)||(39665272-39665322)
chr4 (305-379)||(55947363-55947437)
chr4 (272-357)||(9563284-9563369)
chr4 (325-382)||(10338172-10338229)
chr4 (304-394)||(54121813-54121905)
chr4 (307-379)||(4907445-4907517)
chr4 (307-379)||(4932001-4932073)
chr4 (307-379)||(22674155-22674227)
chr4 (307-379)||(29756275-29756347)
chr4 (268-359)||(39654619-39654708)
chr4 (324-379)||(35785168-35785223)
chr4 (77-147)||(4284145-4284215)
chr4 (304-379)||(53355101-53355178)
chr4 (307-379)||(4933314-4933387)
chr4 (307-379)||(29757591-29757664)
[»] chr3 (36 HSPs)
chr3 (71-382)||(31017492-31017802)
chr3 (77-382)||(32615395-32615705)
chr3 (185-379)||(32558922-32559118)
chr3 (246-385)||(32613880-32614019)
chr3 (246-379)||(41081805-41081938)
chr3 (246-379)||(31795376-31795509)
chr3 (246-379)||(48566999-48567132)
chr3 (246-379)||(32559804-32559939)
chr3 (292-382)||(41879924-41880014)
chr3 (246-382)||(33734425-33734561)
chr3 (304-379)||(33732968-33733043)
chr3 (268-382)||(30700296-30700410)
chr3 (246-379)||(31796757-31796890)
chr3 (246-379)||(48568453-48568586)
chr3 (246-379)||(53527973-53528106)
chr3 (304-381)||(22942337-22942416)
chr3 (304-392)||(40499233-40499321)
chr3 (296-382)||(33781466-33781553)
chr3 (307-379)||(24613596-24613668)
chr3 (303-382)||(31200925-31201005)
chr3 (307-379)||(53529518-53529590)
chr3 (246-379)||(41083193-41083327)
chr3 (292-379)||(30701810-30701896)
chr3 (296-376)||(31199255-31199335)
chr3 (304-379)||(31656956-31657032)
chr3 (75-147)||(40499003-40499075)
chr3 (75-147)||(48568281-48568353)
chr3 (324-379)||(33780660-33780715)
chr3 (246-379)||(44458598-44458731)
chr3 (77-147)||(32614118-32614188)
chr3 (77-147)||(32641314-32641384)
chr3 (341-379)||(45981410-45981448)
chr3 (76-148)||(1677186-1677257)
chr3 (324-392)||(5377797-5377865)
chr3 (75-147)||(31796585-31796657)
chr3 (75-147)||(41083022-41083094)
[»] chr2 (54 HSPs)
chr2 (71-301)||(3751149-3751379)
chr2 (246-379)||(6844019-6844153)
chr2 (246-379)||(40304685-40304818)
chr2 (246-379)||(16143519-16143652)
chr2 (246-379)||(45492955-45493088)
chr2 (246-379)||(45500697-45500830)
chr2 (251-379)||(7317393-7317521)
chr2 (292-377)||(16142231-16142316)
chr2 (226-382)||(22053125-22053281)
chr2 (246-391)||(44097274-44097421)
chr2 (246-388)||(6842709-6842851)
chr2 (71-147)||(18224612-18224688)
chr2 (268-379)||(44465035-44465146)
chr2 (292-379)||(38730031-38730119)
chr2 (246-379)||(45499308-45499441)
chr2 (303-379)||(40127243-40127319)
chr2 (303-382)||(10345127-10345206)
chr2 (304-379)||(40303296-40303371)
chr2 (304-382)||(13947748-13947825)
chr2 (304-382)||(14088937-14089014)
chr2 (307-379)||(8803285-8803357)
chr2 (303-379)||(34591728-34591803)
chr2 (307-379)||(43516401-43516473)
chr2 (304-379)||(1841736-1841811)
chr2 (296-379)||(22054337-22054420)
chr2 (296-379)||(22060133-22060216)
chr2 (304-379)||(28563379-28563454)
chr2 (304-379)||(35588130-35588205)
chr2 (246-359)||(9660868-9660982)
chr2 (304-397)||(18224826-18224919)
chr2 (197-312)||(9662075-9662191)
chr2 (303-379)||(38728188-38728263)
chr2 (307-375)||(40128911-40128979)
chr2 (296-393)||(44820901-44821000)
chr2 (304-379)||(1840160-1840235)
chr2 (331-382)||(37393889-37393940)
chr2 (77-147)||(9661996-9662066)
chr2 (325-379)||(44421344-44421398)
chr2 (267-380)||(472722-472835)
chr2 (307-379)||(44463569-44463639)
chr2 (304-379)||(22060460-22060536)
chr2 (75-147)||(40303529-40303601)
chr2 (303-379)||(43518057-43518133)
chr2 (75-147)||(45499541-45499613)
chr2 (331-381)||(9109006-9109057)
chr2 (268-379)||(15348383-15348494)
chr2 (77-147)||(6842909-6842979)
chr2 (325-379)||(10343991-10344045)
chr2 (326-382)||(18161046-18161102)
chr2 (341-385)||(20588477-20588521)
chr2 (324-364)||(28563956-28563996)
chr2 (224-276)||(31559458-31559510)
chr2 (303-379)||(42827320-42827395)
chr2 (303-379)||(44819772-44819848)
[»] chr7 (45 HSPs)
chr7 (246-379)||(12178486-12178619)
chr7 (246-379)||(46246498-46246631)
chr7 (71-147)||(28556461-28556537)
chr7 (292-382)||(11671255-11671345)
chr7 (71-147)||(706959-707035)
chr7 (71-147)||(33823978-33824054)
chr7 (304-382)||(40028457-40028535)
chr7 (246-379)||(11669844-11669977)
chr7 (292-377)||(12180608-12180693)
chr7 (303-379)||(41384152-41384228)
chr7 (304-379)||(37133630-37133705)
chr7 (304-379)||(40030010-40030085)
chr7 (246-379)||(37131838-37131971)
chr7 (246-379)||(46245125-46245258)
chr7 (304-384)||(45277948-45278028)
chr7 (77-147)||(707922-707995)
chr7 (304-379)||(8230073-8230148)
chr7 (304-379)||(31392061-31392136)
chr7 (304-393)||(21016224-21016313)
chr7 (246-379)||(21716542-21716675)
chr7 (295-379)||(706746-706830)
chr7 (307-379)||(41591518-41591590)
chr7 (303-379)||(41593183-41593259)
chr7 (304-379)||(8231615-8231690)
chr7 (304-379)||(13420267-13420342)
chr7 (304-379)||(21715075-21715150)
chr7 (304-379)||(31393640-31393715)
chr7 (303-379)||(41385787-41385865)
chr7 (295-379)||(708124-708208)
chr7 (335-379)||(31734766-31734810)
chr7 (75-147)||(46245358-46245430)
chr7 (328-379)||(3704401-3704452)
chr7 (304-379)||(14774516-14774590)
chr7 (304-379)||(15136920-15136995)
chr7 (304-379)||(15224969-15225043)
chr7 (292-379)||(37348738-37348825)
chr7 (246-393)||(45276400-45276545)
chr7 (246-384)||(32881114-32881252)
chr7 (324-360)||(11748966-11749002)
chr7 (304-379)||(15135382-15135456)
chr7 (313-379)||(27160308-27160374)
chr7 (313-379)||(27161985-27162051)
chr7 (295-359)||(28556269-28556333)
chr7 (335-379)||(37350216-37350260)
chr7 (307-379)||(43546714-43546786)
[»] chr1 (45 HSPs)
chr1 (246-379)||(24437077-24437210)
chr1 (246-376)||(22684073-22684203)
chr1 (292-382)||(50317019-50317109)
chr1 (246-379)||(50315321-50315454)
chr1 (292-377)||(24438916-24439002)
chr1 (71-324)||(7384641-7384900)
chr1 (268-379)||(7185801-7185912)
chr1 (304-379)||(16673237-16673312)
chr1 (304-379)||(36145347-36145422)
chr1 (305-379)||(7653689-7653763)
chr1 (246-379)||(46604442-46604574)
chr1 (303-379)||(52793707-52793783)
chr1 (308-379)||(7184326-7184397)
chr1 (304-379)||(7655245-7655320)
chr1 (296-387)||(8322516-8322606)
chr1 (304-379)||(28920636-28920711)
chr1 (292-379)||(33981507-33981594)
chr1 (292-379)||(44268891-44268978)
chr1 (292-382)||(7001198-7001287)
chr1 (292-382)||(13211081-13211171)
chr1 (304-386)||(33259353-33259435)
chr1 (304-386)||(33279512-33279594)
chr1 (324-379)||(9626471-9626526)
chr1 (304-379)||(33257884-33257959)
chr1 (304-379)||(33278056-33278131)
chr1 (304-379)||(41668276-41668351)
chr1 (296-389)||(31809982-31810076)
chr1 (307-379)||(9627565-9627637)
chr1 (296-379)||(8323412-8323495)
chr1 (304-379)||(19251143-19251218)
chr1 (296-379)||(31815743-31815826)
chr1 (303-382)||(42300454-42300532)
chr1 (325-379)||(16592024-16592078)
chr1 (325-379)||(31321012-31321066)
chr1 (325-382)||(14095718-14095775)
chr1 (307-374)||(13209582-13209650)
chr1 (246-374)||(36146835-36146962)
chr1 (272-379)||(18309088-18309195)
chr1 (304-379)||(19249323-19249398)
chr1 (304-379)||(28251934-28252009)
chr1 (304-379)||(28919086-28919161)
chr1 (77-147)||(46604674-46604744)
chr1 (335-379)||(10708033-10708077)
chr1 (327-379)||(26734429-26734481)
chr1 (328-384)||(44269079-44269135)
[»] chr6 (22 HSPs)
chr6 (246-389)||(1443410-1443553)
chr6 (304-379)||(1256717-1256792)
chr6 (304-379)||(1258421-1258496)
chr6 (304-384)||(8745430-8745510)
chr6 (292-386)||(4496501-4496593)
chr6 (304-379)||(8752781-8752856)
chr6 (296-379)||(11065626-11065710)
chr6 (265-394)||(28048968-28049099)
chr6 (272-379)||(10699888-10699995)
chr6 (320-379)||(10707679-10707738)
chr6 (304-379)||(19084101-19084176)
chr6 (307-379)||(842189-842261)
chr6 (303-379)||(19596346-19596422)
chr6 (304-379)||(2956216-2956291)
chr6 (324-379)||(19402123-19402178)
chr6 (292-383)||(33469769-33469860)
chr6 (296-382)||(30321137-30321223)
chr6 (303-379)||(19579895-19579971)
chr6 (303-379)||(19597957-19598033)
chr6 (304-379)||(10699233-10699308)
chr6 (270-379)||(4296353-4296461)
chr6 (303-379)||(12599900-12599976)
[»] chr8 (32 HSPs)
chr8 (71-147)||(36900944-36901020)
chr8 (292-379)||(3158006-3158093)
chr8 (71-147)||(17706381-17706457)
chr8 (304-379)||(22714030-22714105)
chr8 (77-147)||(36900115-36900186)
chr8 (292-379)||(39884619-39884706)
chr8 (246-379)||(1650132-1650266)
chr8 (305-379)||(15279615-15279689)
chr8 (305-379)||(15459984-15460058)
chr8 (246-359)||(27339104-27339222)
chr8 (270-375)||(26719392-26719497)
chr8 (77-147)||(17707220-17707291)
chr8 (304-379)||(17707429-17707504)
chr8 (304-379)||(25265886-25265961)
chr8 (292-379)||(33295415-33295501)
chr8 (304-379)||(39886057-39886132)
chr8 (305-379)||(5461937-5462011)
chr8 (304-379)||(25264343-25264418)
chr8 (303-371)||(2552733-2552800)
chr8 (295-379)||(17706168-17706252)
chr8 (217-385)||(44690017-44690185)
chr8 (320-379)||(359311-359370)
chr8 (320-379)||(21142482-21142541)
chr8 (304-379)||(37963277-37963352)
chr8 (295-392)||(36899888-36899986)
chr8 (307-379)||(357980-358053)
chr8 (304-388)||(33293933-33294018)
chr8 (303-379)||(2552410-2552485)
chr8 (246-379)||(45448413-45448548)
chr8 (77-160)||(45448243-45448326)
chr8 (327-379)||(26720252-26720304)
chr8 (295-379)||(36901149-36901233)
[»] chr5 (25 HSPs)
chr5 (246-379)||(38626093-38626226)
chr5 (303-379)||(27756765-27756841)
chr5 (246-378)||(28592081-28592213)
chr5 (292-379)||(16308568-16308656)
chr5 (304-386)||(30332279-30332361)
chr5 (304-379)||(1418917-1418992)
chr5 (304-379)||(17554984-17555060)
chr5 (268-379)||(16310044-16310155)
chr5 (304-379)||(25916259-25916334)
chr5 (304-379)||(38624719-38624794)
chr5 (304-379)||(39103392-39103467)
chr5 (304-384)||(8874255-8874335)
chr5 (246-382)||(11771198-11771334)
chr5 (304-379)||(8872523-8872598)
chr5 (75-147)||(11772451-11772523)
chr5 (303-379)||(28803659-28803734)
chr5 (304-379)||(36619547-36619623)
chr5 (75-147)||(38624952-38625024)
chr5 (320-379)||(9672348-9672407)
chr5 (332-379)||(18201354-18201401)
chr5 (304-379)||(30333988-30334063)
chr5 (326-359)||(28592421-28592454)
chr5 (292-350)||(11772669-11772727)
chr5 (246-359)||(33084032-33084145)
chr5 (313-379)||(35929525-35929591)
[»] scaffold1176 (1 HSPs)
scaffold1176 (213-379)||(2054-2221)
[»] scaffold0280 (1 HSPs)
scaffold0280 (253-379)||(12134-12261)
[»] scaffold0633 (1 HSPs)
scaffold0633 (304-379)||(6875-6950)
[»] scaffold0129 (1 HSPs)
scaffold0129 (296-379)||(4231-4313)
[»] scaffold1118 (1 HSPs)
scaffold1118 (241-374)||(2420-2554)
[»] scaffold0512 (1 HSPs)
scaffold0512 (320-366)||(10121-10167)
[»] scaffold0672 (1 HSPs)
scaffold0672 (340-384)||(545-589)
[»] scaffold0489 (2 HSPs)
scaffold0489 (304-379)||(5378-5457)
scaffold0489 (307-379)||(6799-6871)
[»] scaffold0524 (1 HSPs)
scaffold0524 (341-383)||(7697-7739)


Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 71 - 382
Target Start/End: Complemental strand, 38157332 - 38157020
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaattactcatttat 170  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38157332 tcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaattactcatttat 38157233  T
Q  171 cattctgcatttctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatt-ttttaacagaagttgatgttag 269  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38157232 cattctgtctttccacgtaagccacaaacgccatatcagcctttgccacgtcggcctccgtttgccagcacatcatttttttaacagaagttgatgttag 38157133  T
Q  270 ggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgattt 369  Q
     |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  38157132 agaccaaaaccaaaaaattaacaacttacaaggtttgttttagaacaaaaaaaattacagggacgaaaaccaaaaacacgcgaacttacagggatgattt 38157033  T
Q  370 acatatttaaacc 382  Q
    |||||||||||||    
T  38157032 acatatttaaacc 38157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 71 - 431
Target Start/End: Complemental strand, 55018047 - 55017691
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaattactcatttat 170  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  55018047 tcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatgtgcgtttttggttttaatccctcaaattactcatttat 55017948  T
Q  171 cattctgcatttctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatt-ttttaacagaagttgatgttag 269  Q
    |||||||  |||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||      || |||||    
T  55017947 cattctgtctttccacgtaagccacaaacaccatatcagcctttgccacgtcggcgtccgtttgccagcacatcatttttttaaca------gacgttag 55017854  T
Q  270 ggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaac-aaaaaacacgcgaacttacaaggacgatt 368  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||| |||||||||||||||||||| ||||||||    
T  55017853 ggaccaaaaccaataaattaacaacttacaaggtttattttagaacaaaaaaaattacagaaacgaaaacaaaaaaacacgcgaacttacagggacgatt 55017754  T
Q  369 tacatatttaaaccatttatttattaccatagacaacaagatagaagggatccacaaacatga 431  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  55017753 tacatatttaaaccatttatttattacgatagacaacaggatagaagggatccacgaacatga 55017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 42978864 - 42978975
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    |||||| |||| ||| ||||||  ||||||||||  ||||||||||||||| |||  ||||||||||||||| |||||||||| || |||||||||||||    
T  42978864 agggacgaaaagcaaaaaattattaacttacaaggattgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgat 42978963  T
Q  368 ttacatatttaa 379  Q
    ||||||||||||    
T  42978964 ttacatatttaa 42978975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 382
Target Start/End: Complemental strand, 33607604 - 33607468
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| ||||||| ||| | ||||||||| |||||||| |  || |||||||||| | |||||||||||| ||| |||  |||| |||||||||| |||||    
T  33607604 ttttctaacagatgttaacgttagggactaaaaccaaaatgtttacaacttacagggtttgttttagaaaaaaaaaagatacaaggacgaaaaccaaaaa 33607505  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||  |||  ||||||||||||||||    
T  33607504 cacgcgaacttacagagaccttttacatatttaaacc 33607468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 42889755 - 42889866
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    ||||||||||| ||| |  || | |||||||| | | |||||||||||||| |||  |||| |||||||||||||||||||| ||||||||| |||||||    
T  42889755 agggaccaaaagcaaaatgtttataacttacatggtctgttttagaacaaaaaaagatacaaggacgaaaacaaaaaacacgtgaacttacagggacgat 42889854  T
Q  368 ttacatatttaa 379  Q
    ||||||||||||    
T  42889855 ttacatatttaa 42889866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 42977276 - 42977201
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  42977276 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 42977201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 54535053 - 54534978
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||||| |||   |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  54535053 ttttagaacaaaaaaagacacagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaaacc 54534978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 55948934 - 55949009
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  55948934 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 55949009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 21354699 - 21354833
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||| |||| || | |||| |||| |||||||| || ||||||||||||| | |||||||||||||||| |||  ||||||||||||||  |||||    
T  21354699 ttttttaatagaaattaacgttaaggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaa 21354798  T
Q  346 cacgcg-aacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||| |||   |||||||||||||    
T  21354799 cacgcgaaacttacagggatcttttacatatttaa 21354833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 19995977 - 19996110
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| ||||||||||  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  ||||||||| ||||| |||||    
T  19995977 ttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggaccaaaaccaaaaa 19996076  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| || ||||| |||||||||||||||||||    
T  19996077 cacgccaaattacagggacgatttacatatttaa 19996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 44251741 - 44251608
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  ||||||||||  ||||||||||||||| |||  |||| |||||||||| |||||    
T  44251741 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaagggttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaa 44251642  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| || ||||| |||||||||||||||||||    
T  44251641 cacgccaaattacagggacgatttacatatttaa 44251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 48711933 - 48711861
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| |||  |||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  48711933 ttttagaacaaaaaaagatacaaggacgaaaacaaaaaacacgcaaaattacaaggacgatttacatatttaa 48711861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 55019337 - 55019413
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||  |||||| |||||||||| ||||||||||||||    
T  55019337 tttgttttagaacaaaaaaacttacagggaagaaaacaaaaaatgcgcgaaattacaaggaccatttacatatttaa 55019413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 19994576 - 19994501
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  19994576 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 19994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 48713443 - 48713518
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  48713443 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 48713518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 54123514 - 54123601
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| || ||||||||||||||| |||  ||||||||||||||| ||||||| || || ||||| |||||||||||||||||||    
T  54123514 aacttacaggagttgttttagaacaaaaaaatatacagggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaa 54123601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 380
Target Start/End: Original strand, 22309119 - 22309195
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaa 380  Q
    ||||||||||| ||| |||  ||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  22309119 ttgttttagaataaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaaa 22309195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 32082617 - 32082689
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| |||  ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  32082617 ttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacacggacgatttacatatttaa 32082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 10337182 - 10337107
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  10337182 ttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 10337107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 33609265 - 33609400
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat--tacagggacgaaaacaaaa 343  Q
    |||| ||||||| ||| | ||||||||  |||||||| |  || |||||||||| | ||||||||||||  || ||||   |||| |||||||||| |||    
T  33609265 ttttctaacagaggttaacgttagggattaaaaccaaaatgttcacaacttacagggtttgttttagaaagaaaaaaaagatacaaggacgaaaaccaaa 33609364  T
Q  344 aacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||||  |||||||||||||    
T  33609365 aacacgcgaacttacagggaccttttacatatttaa 33609400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 18597851 - 18597910
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||| ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  18597851 aaaaatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 18597910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 24919130 - 24919055
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||||| ||||| || |||||||||| |||||||| | |||||||||||||||||    
T  24919130 ttgttttagaacaaaaaaagatacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatatttaa 24919055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 44253173 - 44253248
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  || |||||||||||| |||||||||| || ||| | |||||||||||||||||||    
T  44253173 ttgttttagaacaaaaaaagatatagggacgaaaaccaaaaacacgccaaattaaagggacgatttacatatttaa 44253248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 9561924 - 9561854
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 374  Q
    ||||||||||  ||| |||  ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  9561924 ttgttttagataaaaaaaagatacagagacgaaaaccaaaaacacgcgaacttacagggacgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 54536678 - 54536756
Alignment:
Q  305 tgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||||||| ||||  |||| |||| ||||| || |||||||||| ||||| ||||||||||||||||||||||    
T  54536678 tgttttagaacaaaaaaaagatacatggacaaaaaccaagaacacgcgaatttacagggacgatttacatatttaaacc 54536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 4906204 - 4906132
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4906204 ttttagaaaaaaaaaacttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4906132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 18597710 - 18597635
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| |||  ||||||||||||||| |||||||||  || ||||| |||||||||| ||||||||    
T  18597710 ttgttttagaataaaaaaagatacagggacgaaaaccaaaaacacggcaaattacatggacgatttaaatatttaa 18597635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 22307761 - 22307674
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||  ||||||||||||||| ||   ||||||||| ||||| ||||||| ||||||||||| ||||  ||| |||||||||    
T  22307761 aacttacaagggttgttttagaacaaaaaacgatacagggactaaaaccaaaaacatgcgaacttacagggaccttttgcatatttaa 22307674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 23702451 - 23702400
Alignment:
Q  328 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||  |||||||||||||||||  |||||||||||||    
T  23702451 agggacgaaaacaaaaaatgcgcgaacttacaaggaccttttacatatttaa 23702400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 23800884 - 23800782
Alignment:
Q  275 aaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 374  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||| | |  || | |||| |||||| ||||| ||| ||||||||||| |  ||||||||    
T  23800884 aaaaccaaaaaattaacaacttacgagatttgttttagaaaaaaaaga--taaatggacaaaaacagaaaacgcgcaaacttacaaggtc-ttttacata 23800788  T
Q  375 tttaaa 380  Q
    ||||||    
T  23800787 tttaaa 23800782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 39665322 - 39665272
Alignment:
Q  331 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaac 381  Q
    |||||||||||||||  |||||||||||| |||| ||||||||||||||||    
T  39665322 gacgaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaaac 39665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 55947437 - 55947363
Alignment:
Q  305 tgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||| |||||| |||  ||||||||||||||| ||||| |||  || ||||| |||||||||||||||||||    
T  55947437 tgttttataacaaaaaaagatacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaa 55947363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 9563284 - 9563369
Alignment:
Q  272 accaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaactta 357  Q
    ||||||||||| | ||| | ||||| || |  |||||| |||||||| |||  ||||||||||||||||||||| |||||||||||    
T  9563284 accaaaaccaaaacatttataactttcaggggttgtttaagaacaaaaaaagatacagggacgaaaacaaaaaatacgcgaactta 9563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 10338172 - 10338229
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||| ||| ||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  10338172 tacagagacaaaaaccaaaaacacgcaaaattacatggacgatttacatatttaaacc 10338229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 54121905 - 54121813
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcg--aacttacaaggacgatttacatatttaaaccatttatttatta 394  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |   |  || ||||| ||||||||||||||||||| |||| || ||||||    
T  54121905 ttgttttagaacaaaaaaagatacagggacgaaaacaaaaaaaaaatgtcaaattacagggacgatttacatatttaagccatataattatta 54121813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 4907445 - 4907517
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| || ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4907445 ttttagaaaaaaaaaacttgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4907517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 4932073 - 4932001
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| || ||| ||| |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4932073 ttttaaaaaaaaaaaacttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4932001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 22674227 - 22674155
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| ||||| ||||||||||||||||  |||||||||| | ||||  |||||||||||||    
T  22674227 ttttagaaaaaaaaaacttacaaggacgaaaacaaaaaatgcgcgaacttatagggaccttttacatatttaa 22674155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 29756347 - 29756275
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| || ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  29756347 ttttagaaaaaaaaaacttgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 29756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 39654619 - 39654708
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttaca 359  Q
    |||||| |||||||| |  ||||||||||||| | |||||||||||  ||| |||| ||||| ||||||||| |||| ||||| ||||||||    
T  39654619 agggacgaaaaccaaaaggttaacaacttacatggtttgttttaga--aaaaaaaaatacagtgacgaaaaccaaaatcacgccaacttaca 39654708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 35785223 - 35785168
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||| ||||||||||| ||||||||||||| |||   |||||||||||||    
T  35785223 ttacagggacaaaaacaaaaaatacgcgaacttacatggatcttttacatatttaa 35785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 4284145 - 4284215
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| ||||| |||| ||||||| |||||||||||  |||| || |  |||||||||||||||||    
T  4284145 ttttaaatttcaaattatgatgtttacgttttttcaatttcactcctctgcaattttgcgtttttggtttt 4284215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 53355178 - 53355101
Alignment:
Q  304 ttgttttagaaca--aagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||  || |||| ||||| ||| |||||||||||||| | || ||||| |||| ||||||||||||||    
T  53355178 ttgttttagaacacaaaaaaaaatacagagacaaaaacaaaaaacacaccaaattacagggacaatttacatatttaa 53355101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 4933314 - 4933387
Alignment:
Q  307 ttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| |||| || ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4933314 ttttagaagaaaaaaaacttgcagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4933387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 29757591 - 29757664
Alignment:
Q  307 ttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| |||| |||||||||||||||| |||||  || ||||||||| ||||  |||||||||||||    
T  29757591 ttttagaaaaaaaaaaacttacagggacgaaaaccaaaaatgcgtgaacttacagggaccttttacatatttaa 29757664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 8e-65; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 71 - 382
Target Start/End: Original strand, 31017492 - 31017802
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaattactcatttat 170  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||| | |||||||||||||||||||| ||||  || |||||| ||| || ||||    
T  31017492 tcttgtttttaaatttgaaattttgatatttaggttttttcaatttcgtccttatgaacatttgcgtttttgattttggtccctcaaactacccacttat 31017591  T
Q  171 cattctgcatttctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatttt-ttaacagaagttgatgttag 269  Q
    ||||||     || |||||||||||||||| ||| ||| |||||| ||| | ||||| |||||||| ||||||| |||| |||||||||||||| |||||    
T  31017592 cattctatcagtccacgtaagccacaaacgacatctcaacctttgtcacatcggccttcgtttgccagcacatcgtttttttaacagaagttgacgttag 31017691  T
Q  270 ggaccaaaaccaataaattaacaacttacaagat-ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatt 368  Q
    ||||||||| ||| ||||||||||||||| |||| || |||||||||||| |||| |||| | ||||||||  ||||||||||||||||||  |||||||    
T  31017692 ggaccaaaatcaaaaaattaacaacttac-agatattattttagaacaaa-aaaaatacaagaacgaaaac-caaaacacgcgaacttacacagacgatt 31017788  T
Q  369 tacatatttaaacc 382  Q
    ||||||||||||||    
T  31017789 tacatatttaaacc 31017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 77 - 382
Target Start/End: Original strand, 32615395 - 32615705
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaat-tactcatttatcat-- 173  Q
    |||||||||| ||| |||| | ||||||| ||||||||||||| |||||| | ||||||||||||||||||  || || |||  || ||| |||||||      
T  32615395 ttttaaatttcaaaatttggtgtttacgttttttcaatttcgtccctatgcaaatttgcgtttttggttttggtccctaaaaagtagtcacttatcatca 32615494  T
Q  174 tctgcatttctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggca-catcattttttaacagaagttgatgttaggga 272  Q
    ||||     | ||||||||||| |||||||  |||||||| ||||||   |  |||||||||| ||| | |  ||||||||| |||||| | ||||||||    
T  32615495 tctgtcaggccacgtaagccactaacgccaactcagccttcgccacgcgtgtttccgtttgccagcaacgtgtttttttaacggaagtttacgttaggga 32615594  T
Q  273 ccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttac 371  Q
    | |||| ||| || ||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||  |||||    
T  32615595 ctaaaatcaaaaagttaacaacttacatgatttgttttagaacaaaaaaaagttacagggacaaaaacaaaaaacacgcgaacttacagggaccttttac 32615694  T
Q  372 atatttaaacc 382  Q
    |||||||||||    
T  32615695 atatttaaacc 32615705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 185 - 379
Target Start/End: Complemental strand, 32559118 - 32558922
Alignment:
Q  185 acgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatttttt-aacagaagttgatgttagggaccaaaaccaat 283  Q
    ||||||||||| |||||||  |||||||| |||| |   |  |||||||||| |||   |||||||| |||||||||| | ||||||||| ||||||||     
T  32559118 acgtaagccactaacgccaactcagccttcgccatgcgtgtttccgtttgccagcaacgcattttttgaacagaagttaacgttagggactaaaaccaaa 32559019  T
Q  284 aaattaacaa-cttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    || ||||||| ||||||   |||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  32559018 aagttaacaaacttacagagtttgttttcgaacaaaaaaagttacagggacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaa 32558922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 32614019 - 32613880
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    ||||| |||||||||| | ||||||||| |||||||| || ||||||||||||| | ||| |||||||||||| |||| ||||||||||||||| |||||    
T  32614019 tttttgaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttattttagaacaaa-aaaactacagggacgaaaaccaaaaa 32613921  T
Q  346 cacgcgaac-ttacaaggacgatttacatatttaaaccatt 385  Q
    ||||||||| ||||||||||  ||||||||||||| |||||    
T  32613920 cacgcgaactttacaaggaccttttacatatttaagccatt 32613880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 41081938 - 41081805
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||||||||||| |||||    
T  41081938 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 41081839  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  41081838 cacgcgaacttacagggaccttttacatatttaa 41081805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 31795509 - 31795376
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||| ||||||| |||||    
T  31795509 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggccgaaaaccaaaaa 31795410  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  ||||| |||||||    
T  31795409 cacgcgaacttacagggaccttttacgtatttaa 31795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 48567132 - 48566999
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||| ||||||||| |||||    
T  48567132 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaa 48567033  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| |||||||| ||||  |||||||||||||    
T  48567032 cacgcaaacttacagggaccttttacatatttaa 48566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 32559804 - 32559939
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaa--ttacagggacgaaaacaaaa 343  Q
    ||||||||| |||||| | |||| | || ||||| || || ||||||||||||||| |||||||||||||||| ||||  ||||||||| ||||| ||||    
T  32559804 ttttttaacggaagtttacgttatgaactaaaactaaaaagttaacaacttacaaggtttgttttagaacaaaaaaaaagttacagggatgaaaataaaa 32559903  T
Q  344 aacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||  |||  |||||||||||||    
T  32559904 aacacgcgaacttacagagaccttttacatatttaa 32559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 41880014 - 41879924
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||| |||||||||||||||| |||  ||||| ||||||||| |||||||| ||||||||||   ||||||||||||||||||||    
T  41880014 aacttacaaggtttgttttagaacaaaaaaagatacagagacgaaaaccaaaaacacacgaacttacagaaacgatttacatatttaaacc 41879924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 382
Target Start/End: Original strand, 33734425 - 33734561
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| ||||||||||  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  |||||| || ||||| |||||    
T  33734425 ttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacaggaaccaaaaccaaaaa 33734524  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||| || ||||| ||||||||||||||||||||||    
T  33734525 cacgctaaattacagggacgatttacatatttaaacc 33734561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 33733043 - 33732968
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||| |||||| |||||||| |||||||||| || ||||| |||||||||||||||||||    
T  33733043 ttgttttagaacaaaaaaaaatacaggaacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33732968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 30700410 - 30700296
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    ||||||||||| ||| |  || | |||||||| | | |||||||||||||| |||  |||| |||||||||| ||||||||||||||||| |  ||||||    
T  30700410 agggaccaaaagcaaaatgtttataacttacagggtgtgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgcgaacttaaagagacgat 30700311  T
Q  368 ttacatatttaaacc 382  Q
    |||||||||||||||    
T  30700310 ttacatatttaaacc 30700296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 31796757 - 31796890
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  ||| ||||||||||| |||||    
T  31796757 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaa 31796856  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  31796857 cacgcgaacttacagggaccttttacatatttaa 31796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 48568453 - 48568586
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||| ||| ||||||||||| |||||    
T  48568453 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaaatacggggacgaaaaccaaaaa 48568552  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||  |||  |||||||||||||    
T  48568553 cacgcgaacttacagagaccttttacatatttaa 48568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 53528106 - 53527973
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| || ||||||||||||||| |||  ||||||||||||||| |||||    
T  53528106 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggagttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 53528007  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| || ||| | |||||||||||| ||||||    
T  53528006 cacgccaaattaaagggacgatttacacatttaa 53527973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 22942416 - 22942337
Alignment:
Q  304 ttgttttagaacaaagaaaatta--cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaac 381  Q
    ||||||||||||||| |||| ||  |||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  22942416 ttgttttagaacaaaaaaaaatatacagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaaac 22942337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 40499233 - 40499321
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 392  Q
    ||||||||||||||| |||  ||| ||||||||||| ||||||||||||||||||| ||||  ||||||||||||| || | |||||||    
T  40499233 ttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccttatatttat 40499321  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 33781466 - 33781553
Alignment:
Q  296 tacaagatttgttttagaac-aaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||| ||| ||||||||  ||| ||||||||| ||||||||||||||||| |||||||||||| ||||  ||||||||||||||||    
T  33781466 tacaaggtttattttagaaagaaaaaaaattacaaggacgaaaacaaaaaacgcgcgaacttacagggaccttttacatatttaaacc 33781553  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 24613596 - 24613668
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| ||||||||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  24613596 ttttagaaaaaaaaaacttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 24613668  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 31200925 - 31201005
Alignment:
Q  303 tttgttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||||||||| |||| |||||||||  |||||||||||  ||||||||||||  ||| |||||||||||||||||    
T  31200925 tttgttttagaacaaaaaaaacttacagggatcaaaacaaaaaatgcgcgaacttacagagaccatttacatatttaaacc 31201005  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 53529518 - 53529590
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| |||  ||||||||||||||| ||||| |||| || ||||| |||||||||||||||||||    
T  53529518 ttttagaacaaaaaaagatacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaa 53529590  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 41083193 - 41083327
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaa 344  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| ||||  ||| ||||||||||| ||||    
T  41083193 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaaagatacggggacgaaaaccaaaa 41083292  T
Q  345 acacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||| ||||  |||||||||||||    
T  41083293 acacgcaaacttacagggaccttttacatatttaa 41083327  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 30701810 - 30701896
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaagga-cgatttacatatttaa 379  Q
    |||||||| ||| |||||||||||||| |||  |||||| |||||||| ||||||||||||||||| |||||  |||||||||||||||    
T  30701810 aacttacatgatctgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgcgaactta-aaggagtgatttacatatttaa 30701896  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 31199335 - 31199255
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatt 376  Q
    |||||| |||||||||| ||||| ||| ||||||||||||||||  |||| ||||||| ||||| ||||  ||||||||||    
T  31199335 tacaaggtttgttttaggacaaaaaaacttacagggacgaaaacctaaaatacgcgaaattacagggaccttttacatatt 31199255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 31657032 - 31656956
Alignment:
Q  304 ttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| ||||  |||| |||||||||| ||||||| || || ||||| |||||||||||||||||||    
T  31657032 ttgttttagaacaaaaaaaaaatacaaggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaa 31656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 40499003 - 40499075
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  40499003 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 40499075  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 48568281 - 48568353
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  48568281 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 48568353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 33780715 - 33780660
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||||||||| ||||||||||||| ||||  ||||||| |||||    
T  33780715 ttacagggacgaaaacaaaaaatacgcgaacttacagggacattttacatttttaa 33780660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 44458731 - 44458598
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||| | ||||||||| ||||  || |  ||||||||||||| |||   |||||||||||| ||| ||||| |||||||||  || ||    
T  44458731 ttttgtaacggaagttaacgttagggactaaaattaaaaggttaacaacttacaggatcatttttagaacaaaaaaacttacaaggacgaaaatcaagaa 44458632  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||  ||||||||| ||||  |||||||||||||    
T  44458631 cacatgaacttacagggactttttacatatttaa 44458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 32614188 - 32614118
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| ||| |||| | ||||| |  |||||||||||| |||||| | ||||||||||||||||||    
T  32614188 ttttaaatttcaaaatttggtgtttacattatttcaatttcgtccctatgcaaatttgcgtttttggtttt 32614118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 32641384 - 32641314
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| |||||||||| ||||||| ||||||||||| | ||| || |  |||||||||||| ||||    
T  32641384 ttttaaattttaaattttgatgtttacgttttttcaatttcatccctctgcaattttgcgtttttgatttt 32641314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 379
Target Start/End: Complemental strand, 45981448 - 45981410
Alignment:
Q  341 aaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  45981448 aaaaacacgcgaaattacaaggacgttttacatatttaa 45981410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 1677257 - 1677186
Alignment:
Q  76 gttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttta 148  Q
    |||||||| || ||||||||||  |||||| |||| | |||||| |||||| | |||||||||||||||||||    
T  1677257 gttttaaaattcaaattttgatgattacgtttttt-attttcgtccctatgtaaatttgcgtttttggtttta 1677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 5377865 - 5377797
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 392  Q
    |||||||||| |||||||||||  ||| || ||||| ||||  ||||| ||||||| ||||||||||||    
T  5377865 ttacagggactaaaacaaaaaatgcgccaatttacagggaccttttacttatttaagccatttatttat 5377797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 31796585 - 31796657
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| ||||||  | |||| |||||||| |||||| || ||| | |||||||||||    
T  31796585 ggttttaaatttcaaattttgttatttagttgtttttaatttcgtccctatgtaccttttcctttttggtttt 31796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 41083022 - 41083094
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || |||   |||||||||||    
T  41083022 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtacctttttctttttggtttt 41083094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 301
Target Start/End: Original strand, 3751149 - 3751379
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaattactcatttat 170  Q
    ||||| |||| |||||||||||||||||||| ||  |||||||||||||  ||||| |||||||| ||||||||||   || |||||| |||| | | ||    
T  3751149 tcttgtttttgaatttgaaattttgatatttgcggtttttcaatttcgtctctatgtacatttgcatttttggtttgg-tctctcaaactactaactgat 3751247  T
Q  171 cattctgcatttctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatttt-ttaacagaagttgatgttag 269  Q
    |||||||    || || |||||||| |||| ||| |||||||| |||||||  ||||| ||||||| |||||||||||| |||||||||||||| ||||     
T  3751248 cattctgttagtccacataagccactaacgtcatctcagccttcgccacgtcagcctctgtttgccagcacatcatttttttaacagaagttgacgttat 3751347  T
Q  270 ggaccaaaaccaataaattaacaacttacaag 301  Q
    ||| ||||||||||||  ||||||||||||||    
T  3751348 ggatcaaaaccaataaggtaacaacttacaag 3751379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 6844019 - 6844153
Alignment:
Q  246 ttttttaacagaa-gttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaa 344  Q
    ||||||||||||| ||| | ||||||||| |||||||| ||  |||||||||||||| |||||||||||||||| |||  |||| ||| |||||| ||||    
T  6844019 ttttttaacagaaagttaacgttagggactaaaaccaaaaagctaacaacttacaaggtttgttttagaacaaaaaaagatacaaggatgaaaaccaaaa 6844118  T
Q  345 acacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||||  |||||||||||||    
T  6844119 acacgcgaacttacaaggaccttttacatatttaa 6844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 40304685 - 40304818
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||||||||||| |||||    
T  40304685 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 40304784  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  40304785 cacgcgaacttacagggaccttttacatatttaa 40304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 16143519 - 16143652
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||| | ||||||||| |||||||| || ||||||||||||| | |||||||||||||||| |||  ||||||||||||||  |||||    
T  16143519 ttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaa 16143618  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| | |||||  ||||  |||||||||||||    
T  16143619 cacgcaagcttacggggaccttttacatatttaa 16143652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 45492955 - 45493088
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||||||||||| |||||    
T  45492955 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 45493054  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||||| ||||  |||||||||||||    
T  45493055 cacgcgaatttacagggaccttttacatatttaa 45493088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 45500697 - 45500830
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||||||||||| |||||    
T  45500697 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 45500796  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||||| ||||  |||||||||||||    
T  45500797 cacgcgaatttacagggaccttttacatatttaa 45500830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 251 - 379
Target Start/End: Complemental strand, 7317521 - 7317393
Alignment:
Q  251 taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgc 350  Q
    ||||||||||| |  ||||||||||||||||| || ||||||||||| | | |||||||||||||||| |||  |||| |||||||||| ||||||||||    
T  7317521 taacagaagttaacattagggaccaaaaccaaaaagttaacaacttatagggtttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgc 7317422  T
Q  351 gaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| |||   |||||||||||||    
T  7317421 gaacttacagggatcttttacatatttaa 7317393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 16142316 - 16142231
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 377  Q
    |||||||| | |||||||||||||| | |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  16142316 aacttacagggtttgttttagaacagaaaaaaatacagagacgaaaaccaaaaacacgcgaacttacaaggacgatttacatattt 16142231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 382
Target Start/End: Complemental strand, 22053281 - 22053125
Alignment:
Q  226 ctccgtttgccggcacatcattttt-taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat 324  Q
    ||||||||||| || || | ||||| ||||||||||| | ||||||||| |||||||| |  || | |||||||  | || ||||||||||||| |||      
T  22053281 ctccgtttgccagctcagcgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacggggtt-gttttagaacaaaaaaaga 22053183  T
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  22053182 tacagggacgaaaacaaaaaacacgcgaacttacaaagaccttttacatatttaaacc 22053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 391
Target Start/End: Original strand, 44097274 - 44097421
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaac--aaagaaaattacagggacgaaaacaaaa 343  Q
    |||| ||||||||||| | ||||||||| |||||||| |  ||||||||||||| | ||||||||||||   ||| |||| ||||||||||||||| |||    
T  44097274 ttttgtaacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaggaaaaaaaaaatacagggacgaaaaccaaa 44097373  T
Q  344 aacacgcgaacttacaaggacgatttacatatttaaaccatttattta 391  Q
    ||||||||||||||||  |||  |||| |||||||| || ||||||||    
T  44097374 aacacgcgaacttacagagaccttttatatatttaagccttttattta 44097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 388
Target Start/End: Complemental strand, 6842851 - 6842709
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||| | || | |||  |||||||| |||||||||||||||  ||||||||||| || ||| |||  |||||||| |||||| |||||    
T  6842851 ttttttaacagaagttaacgtcaaggattaaaaccaaaaaattaacaacttaccggatttgttttaaaataaaaaaagatacagggatgaaaaccaaaaa 6842752  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaaccatttat 388  Q
    ||||| |||||||| | ||  |||||||||||||||| |||||    
T  6842751 cacgcaaacttacaggaaccttttacatatttaaaccttttat 6842709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 18224612 - 18224688
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||    
T  18224612 tcttgtttttaaatttaaaattttgatatttacgttttttcaatttcgtttctataaacatttgagtttttggtttt 18224688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 44465035 - 44465146
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    ||||||||||| ||| |  || | |||||||||| | |||||||||||||  |||| |||| |||||| ||| ||||||||||||||||||| |||||||    
T  44465035 agggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaacaaaaaatacaaggacgagaaccaaaaacacgcgaacttacagggacgat 44465134  T
Q  368 ttacatatttaa 379  Q
    ||||||||||||    
T  44465135 ttacatatttaa 44465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 38730031 - 38730119
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaa-caaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| | |||||||||||||||| |||  |||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||    
T  38730031 aacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaaccaaaaacacgcgaacttacaaggatgatttatatatttaa 38730119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 45499441 - 45499308
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  ||| ||||||||||| |||||    
T  45499441 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaa 45499342  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  45499341 cacgcgaacttacagggaccttttacatatttaa 45499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 40127319 - 40127243
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| |||||||||| ||||||||||   |||||||||||| |||| ||||||||||||||    
T  40127319 tttgttttagaacaaaaaaacttacagggaccaaaacaaaaattgcgcgaacttacagggaccatttacatatttaa 40127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 10345127 - 10345206
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||||||||| ||| ||||||||||||||||||||||  ||| || ||||| |||  |||||||||||||||||    
T  10345127 tttgttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcaaaattacagggatcatttacatatttaaacc 10345206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 40303371 - 40303296
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||| ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  40303371 ttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 40303296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 13947825 - 13947748
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||| |||  |||||| |||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  13947825 ttgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 13947748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 14089014 - 14088937
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||| |||  |||||| |||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  14089014 ttgttttagaacaaaaaaagatacagg-acgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 14088937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 8803285 - 8803357
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| ||| ||| |||||||||||| |||| || |||||||||||| |||||||||| |||||||    
T  8803285 ttttagaacaaaaaaagttatagggacgaaaaccaaaatcatgcgaacttacaaagacgatttacttatttaa 8803357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 34591803 - 34591728
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| || || ||| |||||||||||||||| || | |||||||| |||||||||||||||||||    
T  34591803 tttgttttagaacaaaaaagat-acaaggacgaaaacaaaaaatacacaaacttacatggacgatttacatatttaa 34591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 43516473 - 43516401
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| ||| ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||    
T  43516473 ttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 43516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 1841736 - 1841811
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| |||||||||| || || || |||||||||||||||||||    
T  1841736 ttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgccaaatttcagggacgatttacatatttaa 1841811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 22054420 - 22054337
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||||||| ||| ||  |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  22054420 tacaaggtttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 22054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 22060133 - 22060216
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||||||| ||| ||  |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  22060133 tacaaggtttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 22060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 28563454 - 28563379
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| |||  |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  28563454 ttgttttagaagaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 28563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 35588205 - 35588130
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| |||  |||| |||||||||| |||| |||||||||||||| ||||||||| |||||||||    
T  35588205 ttgttttagaataaaaaaatatacatggacgaaaaccaaaagcacgcgaacttacatggacgatttccatatttaa 35588130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 359
Target Start/End: Complemental strand, 9660982 - 9660868
Alignment:
Q  246 ttttttaacagaa-gttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaa 344  Q
    ||||||||||||| ||| | |||||| || |||||||| ||  |||||||||||| | ||| |||||||||||| |||  ||||  || |||||| ||||    
T  9660982 ttttttaacagaaagttaacgttaggaactaaaaccaaaaagctaacaacttacagggtttattttagaacaaaaaaagatacaacgatgaaaaccaaaa 9660883  T
Q  345 acacgcgaacttaca 359  Q
    |||||||||||||||    
T  9660882 acacgcgaacttaca 9660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 18224826 - 18224919
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttattacca 397  Q
    ||||||||||||||| ||| |||||||||| ||||| |||||||| | || ||||| ||||  ||||||||||||| || ||| ||| ||||||    
T  18224826 ttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacactaaattacagggaccttttacatatttaagcctttttttttttacca 18224919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 9662075 - 9662191
Alignment:
Q  197 aacgccatatcagcctttgccacgtaggcctccgtttgccggca-catcattttttaacagaagttgatgttagggaccaaaaccaataaattaacaact 295  Q
    |||||||  |||||||| |||||||  | ||||||||||| ||| ||   |||||||||||||||| | || |||||  |||||||| ||||||||||||    
T  9662075 aacgccaactcagccttcgccacgtgtgtctccgtttgccagcaacacgtttttttaacagaagttaacgtcagggattaaaaccaaaaaattaacaact 9662174  T
Q  296 tacaagatttgttttag 312  Q
    |||| | ||||||||||    
T  9662175 tacagggtttgttttag 9662191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 38728263 - 38728188
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| |||  |||| |||||||||| |||||| || ||||||||| |||||| ||||||||||||    
T  38728263 tttgttttagaacaaaaaaagatacatggacgaaaaccaaaaactcgtgaacttacagggacga-ttacatatttaa 38728188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 40128911 - 40128979
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatat 375  Q
    |||||||||||| ||| ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||    
T  40128911 ttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatat 40128979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 44820901 - 44821000
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaa--ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttatt 393  Q
    |||||| ||| |||||||| ||| ||||  ||||||||||||||||||||||  |||||| ||||| ||||  ||||||||||||| || ||||| ||||    
T  44820901 tacaaggtttattttagaaaaaaaaaaaacttacagggacgaaaacaaaaaatgcgcgaatttacagggaccttttacatatttaagccttttatatatt 44821000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 1840235 - 1840160
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| | || ||||| |||||||||| || ||||| |||||||||||||||||||    
T  1840235 ttgttttagaacaaaaaaagatacaagaacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 1840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 37393940 - 37393889
Alignment:
Q  331 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||||||| ||||||||| | ||||||||| ||||||||||    
T  37393940 gacgaaaacaaaaaacacgtgaacttacatgaacgatttacctatttaaacc 37393889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 9661996 - 9662066
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| |||||||||| |||| || |||||| |||||| |||||| | |||||| |||||||||||    
T  9661996 ttttaaatttcaaattttgatgtttaagttttttcattttcgtccctatgcaaatttgcatttttggtttt 9662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 44421344 - 44421398
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||| ||||||||||||||||||||| || ||||| ||| |||||||||||||||    
T  44421344 tacaaggacgaaaacaaaaaacacgccaatttacagggatgatttacatatttaa 44421398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 380
Target Start/End: Complemental strand, 472835 - 472722
Alignment:
Q  267 tagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacga 366  Q
    |||||||||||| ||| |  || | |||||||| || ||||||||||| ||| |||  | |||| | ||||||  |||||| ||||||||||| | ||||    
T  472835 tagggaccaaaaacaaaacgtttataacttacatgagttgttttagaataaaaaaagattcaggaatgaaaaccgaaaacaagcgaacttacaggaacga 472736  T
Q  367 tttacatatttaaa 380  Q
    ||||||||||||||    
T  472735 tttacatatttaaa 472722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 44463639 - 44463569
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| |||  |||||  |||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  44463639 ttttagaacaaaaaaa--tacagaaacgaaaaccaaaaacacacgaacttacatagacgatttacatatttaa 44463569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 22060460 - 22060536
Alignment:
Q  304 ttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| ||||  || |||||||||||| |||||||||| |||||||| ||||  |||||||||||||    
T  22060460 ttgttttaaaacaaaaaaaagatatagggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 22060536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 40303601 - 40303529
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| | |||||||||||    
T  40303601 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcctttttggtttt 40303529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 43518057 - 43518133
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| |||||||||| ||||| |||||  | |||||||||| |||  ||||| ||||||||    
T  43518057 tttgttttagaacaaaaaaacttacagggaccaaaaccaaaaatgcacgaacttacagggatcatttaaatatttaa 43518133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 45499613 - 45499541
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| | |||||||||||    
T  45499613 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcctttttggtttt 45499541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 9109057 - 9109006
Alignment:
Q  331 gacgaaaacaaaaaac-acgcgaacttacaaggacgatttacatatttaaac 381  Q
    |||||||||||||||  |||| ||||||||||||| ||||||||||||||||    
T  9109057 gacgaaaacaaaaaaatacgctaacttacaaggacaatttacatatttaaac 9109006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 15348383 - 15348494
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    |||||||||||  || | ||| | |||||||| |  |||||||| |||||| |||  ||||| ||| ||||| ||||| | |||| | ||||||||||||    
T  15348383 agggaccaaaagtaaaacatttataacttacatgggttgttttacaacaaaaaaagatacagagacaaaaaccaaaaagatgcgagcgtacaaggacgat 15348482  T
Q  368 ttacatatttaa 379  Q
    ||||||||||||    
T  15348483 ttacatatttaa 15348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 6842979 - 6842909
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| |||||||||| |||| || |||||| |||||| |||||| | |||||  |||||||||||    
T  6842979 ttttaaatttcaaattttgatgtttaagttttttcattttcgtccctatgcaaatttggatttttggtttt 6842909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 10344045 - 10343991
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||||||||  | |||||||||| ||||  |||||||||||||    
T  10344045 tacagggacgaaaacaaaaaatgcacgaacttacatggaccttttacatatttaa 10343991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 18161046 - 18161102
Alignment:
Q  326 acagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||| |||||||  |||||||||| || ||| | ||||||||||||||||||||||    
T  18161046 acaggtacgaaaagcaaaaacacgccaaattatatggacgatttacatatttaaacc 18161102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 20588477 - 20588521
Alignment:
Q  341 aaaaacacgcgaacttacaaggacgatttacatatttaaaccatt 385  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  20588477 aaaaacacgcgaaattacagggacgttttacatatttaagccatt 20588521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 28563956 - 28563996
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggac 364  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  28563956 ttacagggacgaaaaccaaaatctcgcgaacttacaaggac 28563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 31559458 - 31559510
Alignment:
Q  224 gcctccgtttgccggcacatcattttttaacagaagttgatgttagggaccaa 276  Q
    ||||||||| ||| ||||| | ||||||||| |||||||| ||||||||||||    
T  31559458 gcctccgttagccagcacaactttttttaacggaagttgacgttagggaccaa 31559510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 42827395 - 42827320
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| || |||||||  |||| |||||  |||||||||||||| ||  |||||||||||||    
T  42827395 tttgttttagaacaaaaaaacttgcagggac-caaaccaaaaatgcgcgaacttacaagaaccgtttacatatttaa 42827320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 44819848 - 44819772
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| |||||||||| ||||  |||||  || ||| ||| | |||| ||||||||||||||    
T  44819848 tttgttttagaacaaaaaaatttacagggacaaaaatcaaaaatgcgtgaaattatagggaccatttacatatttaa 44819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 12178619 - 12178486
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||| | ||||||||| |||||||| || |||||||||||||   |||||||||||||||| |||  ||||||||||||||| |||||    
T  12178619 ttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagagtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 12178520  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| | ||||  |||||||||||||    
T  12178519 cacgcgaacttagagggaccttttacatatttaa 12178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 46246498 - 46246631
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  ||||||||||||||| |||||    
T  46246498 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 46246597  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  46246598 cacgcgaacttacagggaccttttacatatttaa 46246631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 28556537 - 28556461
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||    
T  28556537 tcttgtttttaaatttgaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 28556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 11671255 - 11671345
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||| | |||||||||||||||| | |  |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  11671255 aacttacagggtttgttttagaacaaaaatagatacatggacgaaaacaaaaaacacgcgaacttacggggacgatttacatatttaaacc 11671345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 707035 - 706959
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| |||||||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||    
T  707035 tcttgtttttaaatttaaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 33824054 - 33823978
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| | ||||||||||    
T  33824054 tcttgtttttaaatttgaaattttgatatttacgttttttcaatttcgtccctctgaacatttgtggttttggtttt 33823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 40028535 - 40028457
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  40028535 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 40028457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 11669977 - 11669844
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||| | ||||||||| |||| ||| |  ||||||||||||| | |  ||||||||||||| ||| ||||| |||||||||| |||||    
T  11669977 ttttgtaacggaagttaacgttagggactaaaatcaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacatggacgaaaaccaaaaa 11669878  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    || ||||||||||| ||||  |||||||||||||    
T  11669877 catgcgaacttacagggaccgtttacatatttaa 11669844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 12180608 - 12180693
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 377  Q
    |||||||| | |||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||    
T  12180608 aacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacagggacaattaacatattt 12180693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 41384228 - 41384152
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| |||||| ||| |||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||    
T  41384228 tttgttttaaaacaaaaaaacttacagggaccaaaacaaaaaatgcgcgaacttacaaggaccatttacatatttaa 41384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 37133630 - 37133705
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||| ||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  37133630 ttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaacacgcgaacttacggggacgatttacatatttaa 37133705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 40030010 - 40030085
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||||||| ||||||||||||||||| || ||||| |||||||||||||||||||    
T  40030010 ttgttttagaacaaaaaaatatacagggatgaaaacaaaaaacacgccaaattacagggacgatttacatatttaa 40030085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 37131971 - 37131838
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||||||| |  || | |||||||| || || |||||||||||| |||  |||||| |||||||| ||| |    
T  37131971 ttttgtaacggaagttgacggaagggacgaaaaccaaaacgtttataacttacatgagttattttagaacaaaaaaagatacaggaacgaaaaccaaaca 37131872  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||  |||||||||||||||||||    
T  37131871 cacgcgaacttacgtggacgatttacatatttaa 37131838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 46245258 - 46245125
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  ||| ||||||||||| |||||    
T  46245258 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaa 46245159  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  46245158 cacgcgaacttacagggaccttttacatatttaa 46245125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 45277948 - 45278028
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
    |||||||| |||||| |||  ||||||||||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  45277948 ttgttttaaaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccat 45278028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 707922 - 707995
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtatttt---caatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||||||||||| |||||||| ||||   ||||||| | |||||||||||||||||||||||||||    
T  707922 ttttaaatttgaaattttgacatttacgtttttttttcaatttcatccctatgaacatttgcgtttttggtttt 707995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 8230148 - 8230073
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||| | || ||||| |||||||||||||||||||    
T  8230148 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacaccaaattacagggacgatttacatatttaa 8230073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 31392136 - 31392061
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||  || ||||| |||||||||||||||||||    
T  31392136 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgtcaaattacagggacgatttacatatttaa 31392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 21016313 - 21016224
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttatt 393  Q
    ||||||||||||||| | |  |||| |||| ||||  |||||||||| |||||| | |||||||| ||||||||||||||||||||||||    
T  21016313 ttgttttagaacaaaaatagatacatggacaaaaaacaaaaacacgcaaacttatagggacgattcacatatttaaaccatttatttatt 21016224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 21716542 - 21716675
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  |||||||| |||||| |||  ||||||||||||||| |||||    
T  21716542 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacagggattgttttaaaacaaaaaaagatacagggacgaaaaccaaaaa 21716641  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| || ||||| | |||||||||||||||||    
T  21716642 cacgccaaattacaggaacgatttacatatttaa 21716675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 706830 - 706746
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||  ||||||||||||||| ||| |||||||||| ||||| |||||||||| || ||||| ||||  |||||||||||||    
T  706830 ttacaagggttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaa 706746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 41591590 - 41591518
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| ||| ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||    
T  41591590 ttttagaacaaaaaaacttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 41591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 41593183 - 41593259
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| |||||||||| ||||| |||||  | |||||||||| |||| ||||||||||||||    
T  41593183 tttgttttagaacaaaaaaacttacagggaccaaaaccaaaaatgcacgaacttacagggaccatttacatatttaa 41593259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 8231615 - 8231690
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| ||||||| || || ||||| |||||||||||||||||||    
T  8231615 ttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacaagccaaattacagggacgatttacatatttaa 8231690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 13420267 - 13420342
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| |||||||||| |||||||| || | ||||||||||||||    
T  13420267 ttgttttagaacaaaaaaagatacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaa 13420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 21715150 - 21715075
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| |||  ||||||||||||||  |||||||||| || ||||| |||||||||||||||||||    
T  21715150 ttgttttaaaacaaaaaaagatacagggacgaaaatcaaaaacacgccaaattacagggacgatttacatatttaa 21715075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 31393640 - 31393715
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| |||  |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  31393640 ttgttttataacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 31393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 41385787 - 41385865
Alignment:
Q  303 tttgttttagaacaaagaaaa--ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| |||||| ||||  |||||||||| |||||||||||  |||||||||||| |||| ||||||||||||||    
T  41385787 tttgttttaaaacaaaaaaaaacttacagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaa 41385865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 708124 - 708208
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||  ||||||||||||||| ||| ||||| |||| ||||| |||||||||| || ||||| ||||  |||||||||||||    
T  708124 ttacaagggttgttttagaacaaaaaaacttacatggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaa 708208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 31734766 - 31734810
Alignment:
Q  335 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  31734766 aaaaccaaaaacacgcgaacttacaaggacgatttacatgtttaa 31734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 46245430 - 46245358
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  46245430 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 46245358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 3704452 - 3704401
Alignment:
Q  328 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||| |||||||    
T  3704452 agggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaa 3704401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 14774590 - 14774516
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |  || ||| |||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  14774590 ttgttttagaacaaaaatgat-acacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaa 14774516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 15136920 - 15136995
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  | || |||||||||  ||||||||||||| ||||| |||||||||| ||||||||    
T  15136920 ttgttttagaacaaaaaaagattcaaggacgaaaatcaaaaacacgcgaatttacagggacgatttatatatttaa 15136995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 15225043 - 15224969
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |  || ||| |||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  15225043 ttgttttagaacaaaaatgat-acacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaa 15224969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 37348825 - 37348738
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||  ||||||||||||||| ||   || |||||| ||||| ||||||||||||||||||  |||| ||||||| ||||||    
T  37348825 aacttacaaggattgttttagaacaaaaaatgatatagggactaaaaccaaaaacacgcgaacttacggggaccatttacaaatttaa 37348738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 393
Target Start/End: Complemental strand, 45276545 - 45276400
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  ||||||||| ||||| |||||    
T  45276545 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacaggggttgttttagaacaaaaaaagatacagggacaaaaaccaaaaa 45276446  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaaccatttatttatt 393  Q
    | ||| || |||| |||||||| ||||||||||| || ||||||||||    
T  45276445 ctcgccaaattac-aggacgatctacatatttaagcc-tttatttatt 45276400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 384
Target Start/End: Complemental strand, 32881252 - 32881114
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| ||||||||||  |||||| |||| ||| || |||  |||||| | |  ||||||||||||||| |||  |||| | || |||||||||||    
T  32881252 ttttgtaacggaagttgatgggagggacgaaaatcaaaaagttattaacttataggggttgttttagaacaaaaaaagatacatgaactaaaacaaaaaa 32881153  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
     | || || ||||||| || |||||||||||||||||||    
T  32881152 tatgccaaattacaagaacaatttacatatttaaaccat 32881114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 11748966 - 11749002
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaa 360  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11748966 ttacagggacgaaaataaaaaacacgcgaacttacaa 11749002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 15135456 - 15135382
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| | ||| |||| || |||||||||||||| |||||||||||   |||||||||||||||||    
T  15135456 ttgttttagaataaaaataat-acagtgaagaaaacaaaaaacaagcgaacttacataaacgatttacatatttaa 15135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 27160374 - 27160308
Alignment:
Q  313 aacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| ||| |||||||||||||||| |||| | | |||||||||||||||  ||||| |||||||    
T  27160374 aacaaaaaaacttacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaa 27160308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 27161985 - 27162051
Alignment:
Q  313 aacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| ||| ||||| |||||||||| |||| | |||||||||||| ||||  |||||||||||||    
T  27161985 aacaaaaaaacttacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacatatttaa 27162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 28556333 - 28556269
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttaca 359  Q
    |||||||  ||||||||||||||| ||| |||||| ||| ||||| |||||||||| || |||||    
T  28556333 ttacaagggttgttttagaacaaaaaaacttacagagactaaaaccaaaaacacgctaaattaca 28556269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 37350216 - 37350260
Alignment:
Q  335 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||    
T  37350216 aaaaccaaaaacacgcgaacttacggggaccatttacatatttaa 37350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 43546714 - 43546786
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| |||||| |||| |||||||||||     ||||||||||||| ||||| ||||| |||||||||||||    
T  43546714 ttttaaaacaaaaaaaaatacagggacgatttgcaaaaacacgcgaaattacagggacgttttacatatttaa 43546786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 24437210 - 24437077
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||| ||||| | ||||||||| |||||||| || ||||||| ||||| | |||||||||||||||| |||  ||||| |||||||||||||||    
T  24437210 ttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaatttacagggtttgttttagaacaaaaaaagatacagtgacgaaaacaaaaaa 24437111  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  24437110 cacgcgaacttacagggaccttttacatatttaa 24437077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 376
Target Start/End: Original strand, 22684073 - 22684203
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||| ||||| | |||||||||||||||| |||  |||| |||||||||| |||||    
T  22684073 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaatttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaa 22684172  T
Q  346 cacgcgaacttacaaggacgatttacatatt 376  Q
    |||||||||||||||||||  ||||||||||    
T  22684173 cacgcgaacttacaaggaccttttacatatt 22684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 50317019 - 50317109
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||| | |||||||||||||||| |||  ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  50317019 aacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaacacgcgaacttacatggacgatttacatatttaaacc 50317109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 50315454 - 50315321
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||| | ||||||||| |||||||| |  ||||||||||||| | |  ||||||||||||| ||| |||||| ||||||||| |||||    
T  50315454 ttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacagagacgaaaaccaaaaa 50315355  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| ||||  |||||||||||||    
T  50315354 cacgcgaacttacagggaccttttacatatttaa 50315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 24438916 - 24439002
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 377  Q
    |||||||| | |||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  24438916 aacttacagggtttgttttagaacaaaaaaaagatacagggacgaaaaccaaaaacacgcgaatttacagggacgatttacatattt 24439002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 324
Target Start/End: Original strand, 7384641 - 7384900
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtat-tttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaattactcattta 169  Q
    ||||| |||||||||||||||||||||||||| || | ||||||||||||   |||||||||||| ||||||||||||  || |||||| |||||| |||    
T  7384641 tcttgtttttaaatttgaaattttgatatttaagtttctttcaatttcgtctttatgaacatttgtgtttttggttttggtccctcaaactactcactta 7384740  T
Q  170 tcattctg-catt-------tctacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcattttttaacagaagtt 261  Q
    | |||||| || |       || ||||||||||| || ||| | ||| |||||| ||||   |||||||||||||  ||||  || ||||   |||||||    
T  7384741 ttattctgccagtccacgactccacgtaagccactaatgccttctcaacctttgtcacgctagcctccgtttgccaacaca--atgtttttttagaagtt 7384838  T
Q  262 gatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat 324  Q
    || |||||||||||||||||| ||  ||||||||||  |||||| ||||| |||||| |||||    
T  7384839 gacgttagggaccaaaaccaaaaagctaacaactta-tagatttattttaaaacaaaaaaaat 7384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 7185801 - 7185912
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    ||||||||||| ||| |  || | |||||||| | | |||||||||| ||| |||  ||||||||||||||||||||||| || ||||||||||||||||    
T  7185801 agggaccaaaagcaaaatgtttataacttacagggtctgttttagaataaaaaaagatacagggacgaaaacaaaaaacatgcaaacttacaaggacgat 7185900  T
Q  368 ttacatatttaa 379  Q
    || |||||||||    
T  7185901 ttgcatatttaa 7185912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 16673237 - 16673312
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  16673237 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaa 16673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 36145422 - 36145347
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||    
T  36145422 ttgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 36145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 7653763 - 7653689
Alignment:
Q  305 tgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| |||  ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||    
T  7653763 tgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 7653689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Complemental strand, 46604574 - 46604442
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| ||||||| ||| | ||||||||| |||||||| |  || |||||||||| | ||||| |||||| ||| ||||| ||| |||||||||| |||||    
T  46604574 ttttctaacagaggttaacgttagggactaaaaccaaaatgttcacaacttacagggtttgtgttagaaaaaaaaaaat-acaaggacgaaaaccaaaaa 46604476  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| |||||||| ||||  |||||||||||||    
T  46604475 cacgcaaacttacagggaccttttacatatttaa 46604442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 52793783 - 52793707
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || ||||||||||    
T  52793783 tttgttttagaacaaagaaacttacagggacgaaaacaaaaaatgagcgaacttacagggacctttaacatatttaa 52793707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 7184397 - 7184326
Alignment:
Q  308 tttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| |||  ||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  7184397 tttagaacaaaaaaagatacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaa 7184326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 7655245 - 7655320
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| | |||||||||||||||||    
T  7655245 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaa 7655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 8322606 - 8322516
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattta 387  Q
    |||||| |||||||||||| ||| ||  ||||||||||||||||||||||  |||||||||||| ||||  ||||||||||||| |||||||    
T  8322606 tacaaggtttgttttagaaaaaa-aatcttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagccattta 8322516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 28920636 - 28920711
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||| || ||||| |||||| ||||||||||||    
T  28920636 ttgttttagaacaaaaaaagatacagggacaaaaacaaaaaacacgccaaattacagggacgacttacatatttaa 28920711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 33981594 - 33981507
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||||||||||||||| |||  ||||| ||  ||||| |||||||| |||||||| | |||||||||||||||||||    
T  33981594 aacttacatgatttgttttagaacaaaaaaagatacagagaataaaaccaaaaacacacgaacttatagggacgatttacatatttaa 33981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 44268978 - 44268891
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| | | |||||||||||||| |||  ||||| ||  ||||| ||||||||||||||||||| |||||||||||||||||||    
T  44268978 aacttacatggtctgttttagaacaaaaaaagatacagagataaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 7001287 - 7001198
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||||  |||||||||||||||| || || ||| | | |||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  7001287 aacttacaatgtttgttttagaacaaaaaagat-acatgaatgaaaacaaaaaacacatgaacttacaaggacgatttacctatttaaacc 7001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 13211081 - 13211171
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||||| | | |||||||||||||| | |  ||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||    
T  13211081 aacttacagggtctgttttagaacaaaaagagatacagggacgaaaaccaaaaacacacaaacttacagggaagatttacatatttaaacc 13211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 386
Target Start/End: Original strand, 33259353 - 33259435
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 386  Q
    |||||||| |||||| |||  ||||||||||||||| |||||||||| || ||||| |||| |||||||||||||| ||||||    
T  33259353 ttgttttaaaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagccattt 33259435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 386
Target Start/End: Original strand, 33279512 - 33279594
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 386  Q
    |||||||| |||||| |||  ||||||||||||||| |||||||||| || ||||| |||| |||||||||||||| ||||||    
T  33279512 ttgttttaaaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagccattt 33279594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 9626526 - 9626471
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||    
T  9626526 ttacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaa 9626471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 33257959 - 33257884
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| |||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  33257959 ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33257884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 33278131 - 33278056
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| |||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  33278131 ttgttttagaacaaaaaaagatacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33278056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 41668351 - 41668276
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||| ||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  41668351 ttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 41668276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 31810076 - 31809982
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatt 389  Q
    |||||| ||||||| |||| ||| |||  ||||||||||||||||||||||  |||||||||||| ||||  ||||||||||||| || ||||||    
T  31810076 tacaaggtttgtttcagaaaaaaaaaatcttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagccttttatt 31809982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 9627565 - 9627637
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| ||| ||||||| ||||||||||||||  ||||||||||||  |||  |||||||||||||    
T  9627565 ttttagaacaaaaaaacttacaggaacgaaaacaaaaaatgcgcgaacttacagagaccttttacatatttaa 9627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 8323412 - 8323495
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| | |||||||||| ||| ||  |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  8323412 tacaaggtctgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 8323495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 19251143 - 19251218
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  || |||||| || ||||||||||||| ||  |||| |||||||||||||||||||    
T  19251143 ttgttttagaacaaaaaaagatatagggacaaacacaaaaaacacgcaaaaatacagggacgatttacatatttaa 19251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 31815743 - 31815826
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| ||||||| |||| ||| ||  |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  31815743 tacaaggtttgtttcagaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 31815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 382
Target Start/End: Complemental strand, 42300532 - 42300454
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||||||||||||||  || ||||||| ||||||||| |||| ||||||| ||||| |||| | |||||||||||||||    
T  42300532 tttgttttagaacaaaataacttacaggaacgaaaaca-aaaatacgcgaaattacagggactacttacatatttaaacc 42300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 16592078 - 16592024
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||||||||| || ||||| |||| ||||||||||||||    
T  16592078 tacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaa 16592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 31321066 - 31321012
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||  |||||||    
T  31321066 tacagggacgaaaaccaaaaacacgcgaacttacagggatgatttaactatttaa 31321012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 14095775 - 14095718
Alignment:
Q  325 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||| ||||||||| |||||||||||||||||||| | ||  ||||||||||||||||    
T  14095775 tacatggacgaaaataaaaaacacgcgaacttacatgaaccttttacatatttaaacc 14095718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 13209650 - 13209582
Alignment:
Q  307 ttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 374  Q
    |||||||||||| ||||  |||| ||||||||| |||||||||||||| ||| | ||||||||||||||    
T  13209650 ttttagaacaaaaaaaagatacaaggacgaaaataaaaaacacgcgaatttatagggacgatttacata 13209582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 374
Target Start/End: Original strand, 36146835 - 36146962
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||| |||| |||||||| |  |||||| |||| ||| || |||  |||||||| |  ||||||||||||||| |||  |||||| |||||||| |||||    
T  36146835 ttttgtaacggaagttgacgggagggacgaaaatcaaaaagttattaacttacatggattgttttagaacaaaaaaagatacagg-acgaaaaccaaaaa 36146933  T
Q  346 cacgcgaacttacaaggacgatttacata 374  Q
    ||||  || ||||| ||||||||||||||    
T  36146934 cacgtcaaattacagggacgatttacata 36146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 379
Target Start/End: Complemental strand, 18309195 - 18309088
Alignment:
Q  272 accaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttac 371  Q
    ||||||||||| |  || | ||||||||||  ||||||||||||||| |||  ||||||||||||||  |||| |||  ||| ||| | |||||||||||    
T  18309195 accaaaaccaaaacgtttataacttacaaggattgttttagaacaaaaaaagatacagggacgaaaatcaaaatcacaagaatttagagggacgatttac 18309096  T
Q  372 atatttaa 379  Q
    | ||||||    
T  18309095 aaatttaa 18309088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 19249398 - 19249323
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||  ||||||||| |||||||  | || ||||| |||||||||||||||||||    
T  19249398 ttgttttagaacaaaaaaagatacaaagacgaaaaccaaaaacaatccaaattacagggacgatttacatatttaa 19249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 28252009 - 28251934
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| ||| |||||||||||||||| |||||  ||| || ||||| ||||  ||| |||||||||    
T  28252009 ttgttttagaacaaaaaaacttacagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaa 28251934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 28919161 - 28919086
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||||||| |||||  |||||||||| || ||||| |||| ||||| ||||||||    
T  28919161 ttgttttagaacaaaaaaagatacagggatgaaaatcaaaaacacgccaaattacagggacaatttatatatttaa 28919086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 46604744 - 46604674
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||| |||||||||| |||| || ||||||||||| | ||| || || ||| |||||||||||||    
T  46604744 ttttaaattttaaattttgatttttatgttttttcaatttcatccctttgcacttttacgtttttggtttt 46604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 10708077 - 10708033
Alignment:
Q  335 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||| ||||||||||||||||||| ||||  |||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaa 10708033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 26734481 - 26734429
Alignment:
Q  327 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  26734481 cagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 26734429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 44269079 - 44269135
Alignment:
Q  328 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
    ||||| |||||  ||||||||||||| |||||  |||||||||||||||||| ||||    
T  44269079 agggatgaaaatcaaaaacacgcgaatttacagagacgatttacatatttaagccat 44269135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 246 - 389
Target Start/End: Complemental strand, 1443553 - 1443410
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||| ||||| | ||||||||| |||||||| || ||||||||||||  | |||||||||||||||| |||| ||||||||||||||| |||||    
T  1443553 ttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaacttaccgggtttgttttagaacaaaaaaaaatacagggacgaaaaccaaaaa 1443454  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaaccatttatt 389  Q
    |||| ||||||||| ||||  || |||||||||| || ||||||    
T  1443453 cacgtgaacttacagggacctttcacatatttaagccctttatt 1443410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 1256792 - 1256717
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| |||  ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  1256792 ttgttttagaataaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 1256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 1258421 - 1258496
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  1258421 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 1258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 8745510 - 8745430
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
    ||||||||||||||| |||  || |||||||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  8745510 ttgttttagaacaaaaaaagatatagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccat 8745430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 4496593 - 4496501
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 386  Q
    |||||||| | ||||||||||||||||  ||  |||| |||||||||| ||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  4496593 aacttacatggtttgttttagaacaaattaa--tacatggacgaaaaccaaaaacacgtgaacttacaatgacgatttacctatttaagccattt 4496501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 8752781 - 8752856
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  8752781 ttgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 8752856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 11065626 - 11065710
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||||||| ||| |||  |||||||||||||||| |||||  |||||||||||||||||  |||||||||||||    
T  11065626 tacaaggtttgttttagaaaaaaaaaatcttacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaa 11065710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 28049099 - 28048968
Alignment:
Q  265 gttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagg--gacgaaaacaaaaaacacgcgaacttacaagg 362  Q
    ||||||||| |||||||| |  ||||||||||||| | || ||||||||||||| ||| ||||| |  ||| ||||| |||||||||||||||||||  |    
T  28049099 gttagggactaaaaccaaaaggttaacaacttacagggttagttttagaacaaaaaaacttacaagcagacaaaaaccaaaaacacgcgaacttacagag 28049000  T
Q  363 acgatttacatatttaaaccatttatttatta 394  Q
    ||  || | |||||||| || |||||||||||    
T  28048999 acctttgatatatttaagccttttatttatta 28048968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 10699888 - 10699995
Alignment:
Q  272 accaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttac 371  Q
    ||||||||||| |  || | ||||||||||  ||||||||||||||| |||  |||| |||| || |||||||||||||||||||||| | || ||| ||    
T  10699888 accaaaaccaaaacgtttataacttacaagggttgttttagaacaaaaaaagatacatggacaaatacaaaaaacacgcgaacttacacgaacaattcac 10699987  T
Q  372 atatttaa 379  Q
    ||||||||    
T  10699988 atatttaa 10699995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 10707738 - 10707679
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||| |||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  10707738 aaaaatacagggacgaaaataaaaaacacgcgaacttacagggacaatttatatatttaa 10707679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 19084101 - 19084176
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| |||||||||| || ||||| ||||| |||||||||||||    
T  19084101 ttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgctaaattacagggacggtttacatatttaa 19084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 842261 - 842189
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| ||| ||||||||||||||||||||||  |||||||||||| ||||  | |||||||||||    
T  842261 ttttagaaaaaaaaaacttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttatacatatttaa 842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 19596422 - 19596346
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| ||||| |||| ||||| |||||  |||||||||| | |||| ||||||||||||||    
T  19596422 tttgttttagaacaaaaaaacttacaaggaccaaaaccaaaaatgcgcgaacttatagggacaatttacatatttaa 19596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 2956216 - 2956291
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| |||||||||| ||||||||   || ||||| |||||||||||||||||||    
T  2956216 ttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacatcaaattacagggacgatttacatatttaa 2956291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 19402123 - 19402178
Alignment:
Q  324 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||||||   ||||||||||||||||  |||||||||||||    
T  19402123 ttacagggacgaaaacaaaaaatgtgcgaacttacaaggaccttttacatatttaa 19402178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 383
Target Start/End: Original strand, 33469769 - 33469860
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacca 383  Q
    |||||||| | | ||||||| |||||  |||  |||||| ||||||| ||||||||| |||||||||| |||| ||| ||||||||||||||    
T  33469769 aacttacagggtctgttttaaaacaagaaaagatacaggaacgaaaataaaaaacacacgaacttacagggacaattcacatatttaaacca 33469860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 30321137 - 30321223
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    |||||| |||||||||||| ||| ||  |||||||||||||||| |||||  | ||||||||||  |||  ||||||||||||||||    
T  30321137 tacaaggtttgttttagaaaaaaaaatcttacagggacgaaaaccaaaaatgcacgaacttacagagaccttttacatatttaaacc 30321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 19579971 - 19579895
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| ||||| |||| ||||| |||||  |||||||||| | |||  ||||||||||||||    
T  19579971 tttgttttagaacaaaaaaacttacaaggaccaaaaccaaaaatgcgcgaacttatacggagcatttacatatttaa 19579895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 19597957 - 19598033
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| ||| || || |||| ||||| |||||  |||| ||||||| |||| ||||||||||||||    
T  19597957 tttgttttagaacaaaaaaacttgcaaggaccaaaaccaaaaatgcgcggacttacagggaccatttacatatttaa 19598033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 10699308 - 10699233
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||| | | ||||| |||||||||||||||||||| | ||  |||||||||||||    
T  10699308 ttgttttagaacaaaaaaagatacatgaaggaaaataaaaaacacgcgaacttacatgaacagtttacatatttaa 10699233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 4296353 - 4296461
Alignment:
Q  270 ggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgattt 369  Q
    ||||||||||||| |  || | |||||||| | ||| |||||||||||| |||  |||| | ||||||| |||||||||| |||||||||   |||||||    
T  4296353 ggaccaaaaccaaaacgtttataacttacacggtttattttagaacaaa-aaagatacatgaacgaaaataaaaaacacgtgaacttacagaaacgattt 4296451  T
Q  370 acatatttaa 379  Q
    || |||||||    
T  4296452 acctatttaa 4296461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 12599976 - 12599900
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| |||||| ||| ||| ||||||||||||||||||   ||||| ||||| | || | ||||||||||||    
T  12599976 tttgttttataacaaaaaaacttaaagggacgaaaacaaaaaatgtgcgaaattacaggaaccacttacatatttaa 12599900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 36900944 - 36901020
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  36900944 tcttgtttttaaatttgaaattttgatatttacattttttcaatttcgtccctatgaacatttgcgtttttggtttt 36901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 3158006 - 3158093
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| | | |||||||||||||| |||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3158006 aacttacagggtctgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 3158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 17706457 - 17706381
Alignment:
Q  71 tcttggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    ||||| |||||||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||    
T  17706457 tcttgtttttaaatttaaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 17706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 22714030 - 22714105
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| ||||| |||| ||||||||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  22714030 ttgttttaggacaaaaaaaaatacagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaa 22714105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 36900186 - 36900115
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtatttt-caatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||||||||||| |||||||| |||| ||||||| | |||||||||||||||||||||||||||    
T  36900186 ttttaaatttgaaattttgacatttacgtttttttcaatttcatccctatgaacatttgcgtttttggtttt 36900115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 39884706 - 39884619
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||  || |||||||||||| |||  ||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39884706 aacttacaagggttattttagaacaaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39884619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 1650132 - 1650266
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaa 344  Q
    |||| |||||||||||||  | |||||| |||||||| | ||| | |||  |||||  ||||||||||| ||| ||||  |||| | |||||||| ||||    
T  1650132 ttttgtaacagaagttgacatgagggacgaaaaccaaaacatttataacaaacaagggttgttttagaataaaaaaaagatacatgaacgaaaactaaaa 1650231  T
Q  345 acacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||||| |||||||||||||    
T  1650232 acacgcgaacttacaaggacggtttacatatttaa 1650266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 379
Target Start/End: Original strand, 15279615 - 15279689
Alignment:
Q  305 tgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||| |||||| |||  ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15279615 tgttttaaaacaaaaaaagatacaatgacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15279689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 379
Target Start/End: Original strand, 15459984 - 15460058
Alignment:
Q  305 tgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||| |||||| |||  ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15459984 tgttttaaaacaaaaaaagatacaatgacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15460058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 27339104 - 27339222
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaa-----gatttgttttagaacaaagaaaattacagggacgaaaaca 340  Q
    |||||||||||||||| | ||||| ||| |||||||| || ||||||||||||       |||||| ||||||||||| ||| ||||||| |||||||||    
T  27339104 ttttttaacagaagttaacgttagagactaaaaccaaaaagttaacaacttaccgagtttgatttgatttagaacaaaaaaagttacaggaacgaaaaca 27339203  T
Q  341 aaaaacacgcgaacttaca 359  Q
    ||||||| |||||||||||    
T  27339204 aaaaacatgcgaacttaca 27339222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 26719497 - 26719392
Alignment:
Q  270 ggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgattt 369  Q
    ||||||||||||| | ||| | |||||||| || |||||||  || ||| |||  |||| |||||||||||||||||||||||||||||| ||| |||||    
T  26719497 ggaccaaaaccaaaacatttataacttacaggagttgttttgcaagaaaaaaagatacaaggacgaaaacaaaaaacacgcgaacttacatggatgattt 26719398  T
Q  370 acatat 375  Q
    ||||||    
T  26719397 acatat 26719392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 17707220 - 17707291
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtatttt-caatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||||||||||| |||||||| |||| ||||||| | |||||||||||||||||||||| ||||    
T  17707220 ttttaaatttgaaattttgacatttacgtttttttcaatttcatccctatgaacatttgcgtttttgatttt 17707291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 17707429 - 17707504
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| ||| |||||||||| ||||| |||||||||| || ||||| |||| ||||||||||||||    
T  17707429 ttgttttagaacaaaaaaacttacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaa 17707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 25265886 - 25265961
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| |||  |||||||||||||||||||||||||| || |||||  ||||||||||||||||||    
T  25265886 ttgttttaaaacaaaaaaagatacagggacgaaaacaaaaaacacgccaaattacagagacgatttacatatttaa 25265961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 379
Target Start/End: Original strand, 33295415 - 33295501
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||  ||||||||||||||| || || |||||||| |||||||||||||||| || |||||  ||||||||||||||||||    
T  33295415 aacttacaagggttgttttagaacaaaaaagat-acagggacaaaaacaaaaaacacgccaaattacagagacgatttacatatttaa 33295501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 39886057 - 39886132
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||| ||| |||  ||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39886057 ttgttttagaataaaaaaagatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39886132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 5462011 - 5461937
Alignment:
Q  305 tgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| |||  ||||  ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  5462011 tgttttagaacaaaaaaagatacaaagacgaaaacaaaaaacacgcgaacttacggtgacgatttacatatttaa 5461937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 25264418 - 25264343
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| |||  |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  25264418 ttgttttaaaacaaaaaaagatacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 25264343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 2552733 - 2552800
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttac 371  Q
    |||||||||||||||| || || ||| | | |||||||||||||||||||||||||| |||||||||||    
T  2552733 tttgttttagaacaaaaaatat-acaagaatgaaaacaaaaaacacgcgaacttacagggacgatttac 2552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 17706252 - 17706168
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||  ||||||||||||||| ||| ||||| |||| ||||| |||||||||| || ||||| ||||  |||||||||||||    
T  17706252 ttacaagggttgttttagaacaaaaaaacttacaaggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaa 17706168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 385
Target Start/End: Complemental strand, 44690185 - 44690017
Alignment:
Q  217 cacgtaggcctccgtttgccggcacatcattttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaaca 316  Q
    |||||| ||||| ||| ||| ||||| ||||||||||| |||| ||| ||||||||||||  |||| || |||||||  ||||||   ||||||| ||||    
T  44690185 cacgtatgcctctgttagccagcacaacattttttaacggaagatgacgttagggaccaattccaaaaagttaacaagatacaagggctgttttacaaca 44690086  T
Q  317 aagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatt 385  Q
    || |||  ||||||||  ||||  ||||| |  | ||||||| |||||  ||||||||||||| |||||    
T  44690085 aaaaaagatacagggattaaaagcaaaaatagtccaacttactaggaccttttacatatttaagccatt 44690017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 359311 - 359370
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  359311 aaaattgcagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 359370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Complemental strand, 21142541 - 21142482
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||| ||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  21142541 aaaattacaaggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 21142482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 37963352 - 37963277
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| |||||| ||| ||| || |||||||||||||||| ||| || ||||||||||  |||||||||||||    
T  37963352 ttgttttataacaaaaaaacttatagagacgaaaacaaaaaacgcgctaagttacaaggaccttttacatatttaa 37963277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 36899986 - 36899888
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 392  Q
    |||||||  ||||||||||| ||| |||| |||||||||| ||||| |||||||||| || ||||| ||||  ||||||||||||| || |||| ||||    
T  36899986 ttacaagggttgttttagaagaaaaaaaacttacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccttttagttat 36899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 358053 - 357980
Alignment:
Q  307 ttttagaacaaagaaaa-ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| ||| |||| |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  358053 ttttagaaaaaaaaaaacttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 357980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 33294018 - 33293933
Alignment:
Q  304 ttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttat 388  Q
    ||||||||||||||| ||||  |||| |||||||||| |||||| ||  || |||||||||||||||| |||||||| || |||||    
T  33294018 ttgttttagaacaaaaaaaagatacaaggacgaaaaccaaaaacgcgtcaaattacaaggacgatttatatatttaagccttttat 33293933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 2552485 - 2552410
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| || ||  ||||||||| ||  |||||||||| ||||||||  ||||||||||||||||||    
T  2552485 tttgttttagaacaaaaaagatg-cagggacgataatcaaaaacacgcaaacttacagagacgatttacatatttaa 2552410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 45448413 - 45448548
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat--tacagggacgaaaacaaaa 343  Q
    |||| ||||||| ||| | ||||| ||| |||||||| |  || |||||||| | | |||||||||||| ||| ||||   || | |||||||||| |||    
T  45448413 ttttctaacagaggttaacgttagagactaaaaccaaaatgttcacaacttatagggtttgttttagaagaaaaaaaaagatataaggacgaaaaccaaa 45448512  T
Q  344 aacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||| | ||||  |||||||||||||    
T  45448513 aacacgcgaacttagagggaccttttacatatttaa 45448548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 45448243 - 45448326
Alignment:
Q  77 ttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggttttaatcactcaaatt 160  Q
    |||||||||| |||||||||| |||| || ||||||||||| | ||| || |  |||||||||||||||||  || ||||||||    
T  45448243 ttttaaattttaaattttgatgtttatgttttttcaatttcatccctttgcaattttgcgtttttggttttggtccctcaaatt 45448326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 26720252 - 26720304
Alignment:
Q  327 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||| |||||||||||||||||   |||  ||||||||||||||    
T  26720252 cagggacgaaaaccaaaaacacgcgaacttatggggattatttacatatttaa 26720304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 36901149 - 36901233
Alignment:
Q  295 ttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||  ||||||||||| ||| ||| |||||| ||| ||||  |||||||||| || ||||| ||||  |||||||||||||    
T  36901149 ttacaagggttgttttagaaaaaaaaaacttacagagactaaaaacaaaaacacgctaaattacagggaccttttacatatttaa 36901233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 379
Target Start/End: Original strand, 38626093 - 38626226
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||||| |||  |||| |||||||||| |||||    
T  38626093 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaa 38626192  T
Q  346 cacgcgaacttacaaggacgatttacatatttaa 379  Q
    || ||||||||||| ||||  |||||||||||||    
T  38626193 catgcgaacttacagggaccttttacatatttaa 38626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 27756765 - 27756841
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27756765 tttgttttagaacaaaaaaagatacagggacgaaaacaaaaaacacgcgaacttagagggacgatttacatatttaa 27756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 246 - 378
Target Start/End: Complemental strand, 28592213 - 28592081
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaa 344  Q
    |||| ||||||||||| | |||||| || |||||||| | ||| | |||||||| | || ||||||||||||| ||||  |||||||||||||| |||||    
T  28592213 ttttgtaacagaagttaacgttaggaactaaaaccaaaacatttataacttacacggtt-gttttagaacaaaaaaaaaatacagggacgaaaataaaaa 28592115  T
Q  345 acacgcgaacttacaaggacgatttacatattta 378  Q
    ||||||||||||||||||||  ||||||||||||    
T  28592114 acacgcgaacttacaaggaccttttacatattta 28592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 16308656 - 16308568
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||| | | |||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  16308656 aacttacagggtctgttttagaacaaaaaaaagatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 16308568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 304 - 386
Target Start/End: Complemental strand, 30332361 - 30332279
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 386  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||| || ||||| ||||||||||||||||||| ||||||    
T  30332361 ttgttttagaacaaaaaaagatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagccattt 30332279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 1418917 - 1418992
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  1418917 ttgttttagaacaaaaaaagatacagggacgaaaacaaaaaacacgtcaaattacagggacgatttacatatttaa 1418992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 17554984 - 17555060
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaa-caaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| || | |||||||||||||| | ||||||||||||||||||| |||| ||||||||||||||    
T  17554984 ttgttttagaacaaaaaataatacagggacgaaaaaccaaaaacacgcgaacttacatggacaatttacatatttaa 17555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 379
Target Start/End: Original strand, 16310044 - 16310155
Alignment:
Q  268 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 367  Q
    ||||||||||| ||| |  || | |||||||||| | |||||||||||||| |||  || ||| |||||||| |||||||  |||||||||| |||||||    
T  16310044 agggaccaaaagcaaaatgtttataacttacaaggtctgttttagaacaaaaaaatatataggaacgaaaaccaaaaacatacgaacttacatggacgat 16310143  T
Q  368 ttacatatttaa 379  Q
    ||||||||||||    
T  16310144 ttacatatttaa 16310155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 25916259 - 25916334
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  25916259 ttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaa 25916334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 38624794 - 38624719
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||| ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  38624794 ttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 38624719  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 39103392 - 39103467
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||| || |||||||| |||||||||| || |||||||||||||||||||||||||    
T  39103392 ttgttttagaacaaaaaaagatactggaacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 39103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 8874255 - 8874335
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
    ||||||||||||||| |||  ||||||||||||||| ||||||| |  || ||||| ||||||||||||||||||| ||||    
T  8874255 ttgttttagaacaaaaaaatatacagggacgaaaaccaaaaacaggtcaaattacagggacgatttacatatttaagccat 8874335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 382
Target Start/End: Complemental strand, 11771334 - 11771198
Alignment:
Q  246 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaa 345  Q
    ||||||||||||||||||   ||||||| |||  ||| || ||| ||||||||| | ||||||||| || ||| |||  ||||||||||||||  |||||    
T  11771334 ttttttaacagaagttgacagtagggacgaaattcaaaaagttatcaacttacagggtttgttttaaaaaaaaaaaagatacagggacgaaaatcaaaaa 11771235  T
Q  346 cacgcgaacttacaaggacgatttacatatttaaacc 382  Q
    ||||| |||||||  | ||  ||||||||||||||||    
T  11771234 cacgcaaacttactcgaaccttttacatatttaaacc 11771198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 8872598 - 8872523
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  |||||| |||||||| |||||||||| || ||||| |||||| ||||||||||||    
T  8872598 ttgttttagaacaaaaaaagatacaggaacgaaaaccaaaaacacgccaaattacagggacgaattacatatttaa 8872523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 11772451 - 11772523
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  11772451 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtgcctatgtaccttttcgtttttggtttt 11772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 28803734 - 28803659
Alignment:
Q  303 tttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||||||| || || ||| ||||||||| ||||||||  |||||||||||| ||||||||| |||||||    
T  28803734 tttgttttagaacaaaaaagat-acatggacgaaaataaaaaacatccgaacttacaagaacgatttacctatttaa 28803659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 36619623 - 36619547
Alignment:
Q  304 ttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| ||||  ||||||||||||||  |||||||||| || ||| | |||||||||||||||||||    
T  36619623 ttgttttagaacaaaaaaaagatacagggacgaaaatcaaaaacacgccaaattatagggacgatttacatatttaa 36619547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 38625024 - 38624952
Alignment:
Q  75 ggttttaaatttgaaattttgatatttacgtattttcaatttcgttcctatgaacatttgcgtttttggtttt 147  Q
    |||||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  38625024 ggttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 38624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 379
Target Start/End: Original strand, 9672348 - 9672407
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||  |||| ||||||||    
T  9672348 aaaattacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttatatatttaa 9672407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 18201354 - 18201401
Alignment:
Q  332 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  18201354 acgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaa 18201401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 30333988 - 30334063
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||||||| ||||| |||||||||| || ||| | |||||| ||||||||||||    
T  30333988 ttgttttagaacaaaaaaagatacagggacaaaaaccaaaaacacgccaaattatagggacgacttacatatttaa 30334063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 28592421 - 28592454
Alignment:
Q  326 acagggacgaaaacaaaaaacacgcgaacttaca 359  Q
    ||||||||||||||||||||||||||||||||||    
T  28592421 acagggacgaaaacaaaaaacacgcgaacttaca 28592454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 350
Target Start/End: Original strand, 11772669 - 11772727
Alignment:
Q  292 aacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgc 350  Q
    ||||||||||  ||||||||||||||| |||  ||| ||||||||||| ||||||||||    
T  11772669 aacttacaagggttgttttagaacaaaaaaagatacggggacgaaaaccaaaaacacgc 11772727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 33084032 - 33084145
Alignment:
Q  246 ttttttaacagaa-gttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaa 344  Q
    ||||||||||||| ||| | ||||| ||| |||||||| |   |||||||||||| | ||| |||||||||||| |||  |||||||| |||||| ||||    
T  33084032 ttttttaacagaaagttaacgttagtgactaaaaccaaaatgctaacaacttacagg-tttattttagaacaaaaaaagatacagggatgaaaaccaaaa 33084130  T
Q  345 acacgcgaacttaca 359  Q
    |||| | ||||||||    
T  33084131 acacacaaacttaca 33084145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 35929591 - 35929525
Alignment:
Q  313 aacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| ||| |||||||||||||||| |||| | | |||||||||||||||  ||||| |||||||    
T  35929591 aacaaaaaaacttacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaa 35929525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 379
Target Start/End: Complemental strand, 2221 - 2054
Alignment:
Q  213 ttgccacgtaggcctccgtttgccggcacatcattttt-taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgtttta 311  Q
    |||||||||  | ||||||||||| || || | ||||| ||||||||||| | ||||||||| |||||||| |  || | |||||||  |  ||||||||    
T  2221 ttgccacgtgtgactccgtttgccagctcaacgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggggttgtttta 2122  T
Q  312 gaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||| |||  |||||||||| |||| ||||||||||||||||||||||||  ||| |||||||||    
T  2121 gaacaaaaaaagatacagggacggaaaccaaaaacacgcgaacttacaaggacatttttcatatttaa 2054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 379
Target Start/End: Complemental strand, 12261 - 12134
Alignment:
Q  253 acagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaat-tacagggacgaaaacaaaaaacacgcg 351  Q
    ||||||||| | ||||||||| |||||||| |  ||||||||||||| | ||||||||||||  || ||||  ||||||||||||||| |||||||||||    
T  12261 acagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaagaaaaaaagatacagggacgaaaaccaaaaacacgcg 12162  T
Q  352 aacttacaaggacgatttacatatttaa 379  Q
    |||||||  | ||  |||||||||||||    
T  12161 aacttaccggaaccttttacatatttaa 12134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 6875 - 6950
Alignment:
Q  304 ttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||  ||||| ||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  6875 ttgttttagaacaaaaaaatatacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 379
Target Start/End: Original strand, 4231 - 4313
Alignment:
Q  296 tacaagatttgttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||| |||||||||||| ||| ||  |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4231 tacaaggtttgttttagaaaaaa-aatcttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1118 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 2554 - 2420
Alignment:
Q  241 catcattttt-taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacaaagaaaattacagggacgaaaac 339  Q
    |||||||||| ||||||||||| | ||||||||| |||||||| |     | |||||||| |  |||||||| || ||| |||  || ||||||||||||    
T  2554 catcatttttgtaacagaagttaacgttagggactaaaaccaaaacgcgtataacttacaggggttgttttaaaataaaaaaagatatagggacgaaaac 2455  T
Q  340 aaaaaacacgcgaacttacaaggacgatttacata 374  Q
     ||||||||||||||||||| ||||  ||||||||    
T  2454 caaaaacacgcgaacttacagggaccttttacata 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 366
Target Start/End: Original strand, 10121 - 10167
Alignment:
Q  320 aaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacga 366  Q
    |||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  10121 aaaaatacagggacgaaaacaaaaaatacgcgaatttacaaggacga 10167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 545 - 589
Alignment:
Q  340 aaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 384  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  545 aaaaaacacgcgatcttacatggacgatttacatatttaacccat 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 5457 - 5378
Alignment:
Q  304 ttgttttagaacaaagaaaatt--acagggacgaaaac-aaaaaaca-cgcgaacttacaaggacgatttacatatttaa 379  Q
    ||||||||||||||| |||| |  |||||||||||||| |||||||| ||| || ||||| |||||||||||||||||||    
T  5457 ttgttttagaacaaaaaaaagttaacagggacgaaaaccaaaaaacaacgccaaattacagggacgatttacatatttaa 5378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 6799 - 6871
Alignment:
Q  307 ttttagaacaaagaaaattacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 379  Q
    |||||||||||| |||  |||||| || ||||| |||||||||| || |||||  ||||||||||||||||||    
T  6799 ttttagaacaaaaaaagatacaggaacaaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 6871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 7739 - 7697
Alignment:
Q  341 aaaaacacgcgaacttacaaggacgatttacatatttaaacca 383  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||    
T  7739 aaaaacacgcgaaattacagggacgttttacatatttaaacca 7697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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