View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_337 (Length: 259)

Name: NF10145A_low_337
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_337
NF10145A_low_337
[»] chr1 (67 HSPs)
chr1 (13-257)||(10272251-10272495)
chr1 (30-236)||(40419652-40419859)
chr1 (30-219)||(28528385-28528575)
chr1 (41-214)||(50771629-50771802)
chr1 (34-243)||(27637697-27637909)
chr1 (67-242)||(43423726-43423902)
chr1 (50-248)||(37263332-37263530)
chr1 (32-232)||(26016454-26016655)
chr1 (65-243)||(3818953-3819132)
chr1 (30-139)||(51584855-51584964)
chr1 (65-236)||(15577434-15577603)
chr1 (33-225)||(12261778-12261971)
chr1 (38-169)||(43898310-43898444)
chr1 (87-257)||(2544591-2544761)
chr1 (65-205)||(42501152-42501293)
chr1 (72-161)||(52442632-52442721)
chr1 (30-129)||(7083011-7083110)
chr1 (65-243)||(40416377-40416556)
chr1 (65-242)||(32404623-32404801)
chr1 (73-233)||(38868898-38869059)
chr1 (65-208)||(30834074-30834218)
chr1 (104-241)||(13827706-13827844)
chr1 (72-236)||(48431510-48431675)
chr1 (67-139)||(853884-853956)
chr1 (73-153)||(17815576-17815656)
chr1 (30-126)||(19969274-19969370)
chr1 (67-190)||(33560957-33561081)
chr1 (65-164)||(6025691-6025790)
chr1 (91-243)||(5338730-5338883)
chr1 (65-205)||(8796253-8796394)
chr1 (73-241)||(16943183-16943351)
chr1 (88-243)||(27847924-27848081)
chr1 (121-204)||(17640206-17640290)
chr1 (77-169)||(50806750-50806842)
chr1 (65-136)||(8342978-8343049)
chr1 (171-242)||(8343062-8343133)
chr1 (62-205)||(10569165-10569305)
chr1 (102-236)||(39422177-39422311)
chr1 (72-248)||(38807775-38807952)
chr1 (72-248)||(1210746-1210923)
chr1 (85-257)||(9509310-9509483)
chr1 (108-248)||(51602057-51602198)
chr1 (65-133)||(29577239-29577307)
chr1 (85-248)||(34792466-34792630)
chr1 (123-233)||(14225984-14226095)
chr1 (171-234)||(23791848-23791911)
chr1 (72-139)||(44008690-44008757)
chr1 (104-155)||(49377419-49377470)
chr1 (180-234)||(18793201-18793255)
chr1 (144-257)||(1661422-1661534)
chr1 (72-248)||(8671919-8672096)
chr1 (176-257)||(13827926-13828007)
chr1 (171-224)||(29807891-29807944)
chr1 (65-117)||(8203231-8203283)
chr1 (123-234)||(16822177-16822289)
chr1 (85-133)||(36339920-36339968)
chr1 (85-160)||(9599511-9599586)
chr1 (179-242)||(51440977-51441040)
chr1 (32-236)||(990522-990728)
chr1 (65-139)||(12231476-12231550)
chr1 (179-248)||(15085935-15086004)
chr1 (179-248)||(22090097-22090166)
chr1 (72-248)||(32231058-32231235)
chr1 (183-236)||(51812538-51812591)
chr1 (199-235)||(15242036-15242072)
chr1 (179-243)||(39140526-39140590)
chr1 (105-200)||(43375724-43375820)
[»] chr5 (52 HSPs)
chr5 (53-259)||(2712934-2713141)
chr5 (30-248)||(31635982-31636201)
chr5 (32-242)||(21952364-21952573)
chr5 (30-243)||(14749313-14749527)
chr5 (40-242)||(10082817-10083014)
chr5 (33-234)||(1525659-1525861)
chr5 (65-236)||(42199299-42199471)
chr5 (30-138)||(33667547-33667655)
chr5 (30-257)||(11002483-11002713)
chr5 (65-248)||(38684481-38684665)
chr5 (171-248)||(33667217-33667294)
chr5 (69-248)||(38578622-38578802)
chr5 (61-242)||(7359353-7359534)
chr5 (65-250)||(12576957-12577131)
chr5 (72-248)||(18351013-18351189)
chr5 (65-257)||(14667755-14667956)
chr5 (33-229)||(21915901-21916097)
chr5 (35-225)||(34734461-34734655)
chr5 (144-243)||(43475246-43475346)
chr5 (81-148)||(3775180-3775247)
chr5 (65-231)||(6889011-6889178)
chr5 (81-234)||(15489605-15489759)
chr5 (67-153)||(18698891-18698977)
chr5 (72-248)||(4496385-4496562)
chr5 (85-205)||(6859425-6859546)
chr5 (170-243)||(37065535-37065608)
chr5 (65-160)||(42199483-42199578)
chr5 (34-234)||(17213092-17213290)
chr5 (178-236)||(28676608-28676666)
chr5 (65-139)||(36123279-36123353)
chr5 (72-248)||(1287683-1287860)
chr5 (30-99)||(1935273-1935342)
chr5 (171-248)||(15168793-15168870)
chr5 (72-248)||(24178511-24178688)
chr5 (32-125)||(29922409-29922502)
chr5 (81-141)||(15369910-15369969)
chr5 (30-94)||(37065632-37065696)
chr5 (61-140)||(27992-28071)
chr5 (38-97)||(1174642-1174701)
chr5 (181-248)||(1275265-1275332)
chr5 (97-204)||(16134282-16134389)
chr5 (65-124)||(27998567-27998626)
chr5 (177-248)||(34273028-34273099)
chr5 (65-139)||(7678589-7678663)
chr5 (170-235)||(4026538-4026603)
chr5 (65-133)||(9235166-9235232)
chr5 (179-236)||(12492596-12492653)
chr5 (179-248)||(16347590-16347659)
chr5 (179-248)||(28977071-28977140)
chr5 (179-248)||(38684968-38685037)
chr5 (65-117)||(2066130-2066182)
chr5 (65-140)||(8492430-8492508)
[»] chr2 (50 HSPs)
chr2 (30-236)||(44437783-44437990)
chr2 (33-221)||(42543263-42543452)
chr2 (65-195)||(19235081-19235212)
chr2 (30-162)||(5759057-5759189)
chr2 (91-250)||(23714384-23714544)
chr2 (91-250)||(24102056-24102216)
chr2 (65-257)||(38434943-38435137)
chr2 (30-257)||(4598624-4598852)
chr2 (85-248)||(12141545-12141709)
chr2 (73-236)||(37481722-37481886)
chr2 (30-133)||(12489864-12489967)
chr2 (65-219)||(43832128-43832283)
chr2 (65-196)||(26784437-26784569)
chr2 (30-230)||(33594335-33594534)
chr2 (65-257)||(43752044-43752237)
chr2 (72-236)||(38860186-38860356)
chr2 (65-118)||(33287553-33287606)
chr2 (72-161)||(33504312-33504401)
chr2 (65-139)||(18188863-18188937)
chr2 (32-236)||(9556433-9556637)
chr2 (172-248)||(8180781-8180857)
chr2 (150-233)||(13240927-13241011)
chr2 (123-241)||(14197313-14197437)
chr2 (172-248)||(25834682-25834758)
chr2 (65-164)||(37470230-37470329)
chr2 (72-248)||(2610589-2610766)
chr2 (65-130)||(26670888-26670953)
chr2 (30-99)||(28960273-28960342)
chr2 (180-233)||(37332976-37333029)
chr2 (65-233)||(42092533-42092702)
chr2 (87-139)||(4481599-4481651)
chr2 (104-163)||(7293689-7293748)
chr2 (65-190)||(7431986-7432117)
chr2 (32-139)||(37452290-37452397)
chr2 (65-139)||(41779207-41779282)
chr2 (144-257)||(45077744-45077861)
chr2 (144-205)||(3481185-3481247)
chr2 (71-248)||(36183452-36183630)
chr2 (171-233)||(37332357-37332419)
chr2 (176-242)||(41763251-41763317)
chr2 (61-99)||(45640618-45640656)
chr2 (65-130)||(2807565-2807630)
chr2 (72-248)||(3866073-3866250)
chr2 (179-236)||(38452897-38452954)
chr2 (179-248)||(43238305-43238374)
chr2 (61-137)||(440829-440905)
chr2 (65-101)||(1626344-1626380)
chr2 (179-243)||(11017320-11017384)
chr2 (72-132)||(36869976-36870036)
chr2 (180-236)||(40759113-40759169)
[»] chr8 (58 HSPs)
chr8 (13-242)||(32043597-32043827)
chr8 (30-222)||(16351405-16351597)
chr8 (30-169)||(7531706-7531845)
chr8 (71-257)||(25985511-25985697)
chr8 (38-232)||(39953334-39953529)
chr8 (65-235)||(10080004-10080174)
chr8 (91-248)||(25985723-25985880)
chr8 (85-257)||(45419229-45419400)
chr8 (75-205)||(3079711-3079840)
chr8 (65-235)||(16917198-16917368)
chr8 (88-257)||(29700268-29700438)
chr8 (65-186)||(38178357-38178479)
chr8 (65-204)||(29520695-29520834)
chr8 (119-244)||(34196164-34196287)
chr8 (30-116)||(26685981-26686067)
chr8 (30-128)||(30812878-30812976)
chr8 (76-169)||(38409130-38409223)
chr8 (85-248)||(45512612-45512776)
chr8 (80-139)||(2216399-2216458)
chr8 (170-253)||(9695627-9695710)
chr8 (65-160)||(16715363-16715458)
chr8 (65-139)||(24399886-24399960)
chr8 (82-243)||(30748463-30748625)
chr8 (65-139)||(35643703-35643777)
chr8 (82-164)||(37826377-37826459)
chr8 (65-140)||(9904979-9905054)
chr8 (199-246)||(30456444-30456491)
chr8 (65-139)||(79138-79212)
chr8 (65-135)||(4011198-4011268)
chr8 (65-127)||(43733330-43733392)
chr8 (65-138)||(26638904-26638977)
chr8 (170-258)||(34196063-34196149)
chr8 (176-248)||(36395158-36395231)
chr8 (84-191)||(5908704-5908812)
chr8 (179-243)||(12491350-12491414)
chr8 (65-169)||(32931042-32931146)
chr8 (127-242)||(43732563-43732678)
chr8 (67-134)||(16994543-16994610)
chr8 (65-124)||(23023351-23023410)
chr8 (179-242)||(36545156-36545219)
chr8 (30-101)||(38901881-38901952)
chr8 (170-248)||(2776432-2776510)
chr8 (65-139)||(24739945-24740019)
chr8 (65-139)||(30783139-30783213)
chr8 (85-206)||(35914718-35914840)
chr8 (72-248)||(40813325-40813502)
chr8 (183-248)||(36565457-36565522)
chr8 (37-101)||(541433-541497)
chr8 (81-133)||(5127383-5127435)
chr8 (179-243)||(8879652-8879716)
chr8 (171-235)||(12611549-12611613)
chr8 (85-117)||(28269795-28269827)
chr8 (86-126)||(29709821-29709861)
chr8 (65-169)||(35362747-35362851)
chr8 (180-236)||(35643814-35643870)
chr8 (176-248)||(39946858-39946930)
chr8 (104-235)||(41971914-41972046)
chr8 (90-205)||(43904787-43904903)
[»] chr4 (78 HSPs)
chr4 (30-236)||(31897490-31897697)
chr4 (14-241)||(10209042-10209272)
chr4 (13-248)||(46372025-46372263)
chr4 (65-242)||(26356626-26356804)
chr4 (30-205)||(31961328-31961504)
chr4 (34-236)||(42285769-42285969)
chr4 (36-257)||(35555718-35555937)
chr4 (117-248)||(17900481-17900613)
chr4 (65-257)||(54470199-54470392)
chr4 (32-257)||(42639084-42639310)
chr4 (102-230)||(25257715-25257844)
chr4 (88-236)||(50471539-50471688)
chr4 (120-231)||(2589008-2589120)
chr4 (30-197)||(2589124-2589292)
chr4 (72-221)||(51550352-51550502)
chr4 (65-242)||(33709931-33710109)
chr4 (30-163)||(6478745-6478878)
chr4 (61-197)||(37488143-37488280)
chr4 (30-242)||(44360094-44360306)
chr4 (65-181)||(47147441-47147558)
chr4 (29-141)||(10775530-10775642)
chr4 (170-257)||(51252664-51252751)
chr4 (66-168)||(44667343-44667445)
chr4 (84-236)||(1427400-1427553)
chr4 (67-191)||(28351617-28351742)
chr4 (72-248)||(31959918-31960095)
chr4 (104-243)||(29398824-29398964)
chr4 (144-243)||(46715548-46715648)
chr4 (65-227)||(47372673-47372836)
chr4 (170-257)||(41192828-41192915)
chr4 (65-153)||(49738647-49738731)
chr4 (65-242)||(50680746-50680925)
chr4 (65-139)||(42293362-42293436)
chr4 (66-168)||(44686668-44686770)
chr4 (72-134)||(45569113-45569175)
chr4 (81-139)||(49987519-49987577)
chr4 (104-169)||(11389805-11389870)
chr4 (85-241)||(47611735-47611892)
chr4 (104-205)||(53518459-53518558)
chr4 (90-248)||(436230-436389)
chr4 (144-257)||(28497482-28497595)
chr4 (181-243)||(31459036-31459098)
chr4 (75-128)||(2557779-2557832)
chr4 (81-205)||(13805378-13805503)
chr4 (179-248)||(27450391-27450460)
chr4 (179-248)||(33191060-33191129)
chr4 (66-119)||(33225931-33225984)
chr4 (183-236)||(36557246-36557298)
chr4 (179-248)||(43433925-43433994)
chr4 (170-242)||(50662394-50662467)
chr4 (179-248)||(52569727-52569796)
chr4 (72-243)||(4440859-4441031)
chr4 (66-205)||(8459133-8459273)
chr4 (74-134)||(18966721-18966781)
chr4 (65-169)||(21945735-21945839)
chr4 (183-243)||(45423621-45423681)
chr4 (179-243)||(53707800-53707864)
chr4 (81-164)||(7682023-7682106)
chr4 (74-117)||(8599047-8599090)
chr4 (104-234)||(31339552-31339681)
chr4 (170-257)||(44047551-44047638)
chr4 (65-135)||(48033200-48033270)
chr4 (32-139)||(53540401-53540508)
chr4 (84-248)||(1793461-1793624)
chr4 (85-127)||(35690394-35690436)
chr4 (81-139)||(38903831-38903888)
chr4 (61-127)||(45204932-45204998)
chr4 (179-241)||(50286970-50287032)
chr4 (179-248)||(33227210-33227279)
chr4 (35-116)||(39754461-39754542)
chr4 (74-135)||(44719470-44719531)
chr4 (179-236)||(48622755-48622812)
chr4 (68-101)||(51841298-51841331)
chr4 (89-197)||(55028869-55028977)
chr4 (210-242)||(10775665-10775697)
chr4 (180-248)||(28236184-28236252)
chr4 (103-205)||(40933052-40933153)
chr4 (76-140)||(42566349-42566413)
[»] chr7 (67 HSPs)
chr7 (33-257)||(36514273-36514497)
chr7 (38-257)||(5335912-5336130)
chr7 (80-242)||(14593772-14593930)
chr7 (80-242)||(16013295-16013453)
chr7 (123-257)||(19262589-19262723)
chr7 (69-248)||(18605247-18605427)
chr7 (69-248)||(18637563-18637743)
chr7 (69-248)||(18650997-18651177)
chr7 (65-235)||(28628030-28628201)
chr7 (93-257)||(48736025-48736189)
chr7 (30-153)||(19119486-19119608)
chr7 (65-135)||(40830317-40830387)
chr7 (81-243)||(12966028-12966185)
chr7 (33-133)||(34745864-34745964)
chr7 (86-257)||(36136756-36136928)
chr7 (86-257)||(47848666-47848838)
chr7 (83-224)||(6420605-6420747)
chr7 (65-229)||(24549785-24549955)
chr7 (144-242)||(45558369-45558468)
chr7 (66-234)||(41483506-41483671)
chr7 (171-233)||(41948532-41948594)
chr7 (83-257)||(43282400-43282576)
chr7 (61-248)||(28858045-28858234)
chr7 (184-248)||(38920795-38920859)
chr7 (65-129)||(45601597-45601661)
chr7 (104-257)||(1740793-1740948)
chr7 (72-139)||(30814775-30814842)
chr7 (65-231)||(38135310-38135476)
chr7 (66-133)||(44401223-44401290)
chr7 (32-196)||(1569069-1569234)
chr7 (72-248)||(13859112-13859289)
chr7 (108-248)||(33072953-33073094)
chr7 (179-243)||(22349626-22349690)
chr7 (85-248)||(33349923-33350087)
chr7 (72-234)||(28020979-28021140)
chr7 (82-164)||(28359343-28359426)
chr7 (183-257)||(7189442-7189516)
chr7 (65-242)||(30200061-30200238)
chr7 (34-116)||(38921154-38921236)
chr7 (72-248)||(39906476-39906651)
chr7 (61-163)||(47796245-47796347)
chr7 (72-243)||(12841379-12841551)
chr7 (179-248)||(34869421-34869490)
chr7 (177-250)||(40830222-40830295)
chr7 (179-248)||(49029277-49029346)
chr7 (85-248)||(2885839-2886003)
chr7 (181-257)||(27021906-27021982)
chr7 (179-243)||(35906413-35906477)
chr7 (30-98)||(45558482-45558550)
chr7 (180-243)||(7220750-7220813)
chr7 (90-248)||(31005224-31005383)
chr7 (176-242)||(7273046-7273112)
chr7 (109-202)||(39812004-39812098)
chr7 (179-241)||(44855384-44855446)
chr7 (179-248)||(6374869-6374938)
chr7 (30-87)||(25578023-25578080)
chr7 (66-127)||(28562464-28562525)
chr7 (180-257)||(40169641-40169718)
chr7 (171-248)||(42187471-42187548)
chr7 (179-248)||(43281675-43281744)
chr7 (179-248)||(45836692-45836761)
chr7 (93-205)||(48202827-48202940)
chr7 (61-117)||(21517473-21517529)
chr7 (65-133)||(22174117-22174185)
chr7 (65-117)||(29653643-29653695)
chr7 (83-139)||(32368452-32368508)
chr7 (180-248)||(46356069-46356137)
[»] chr3 (56 HSPs)
chr3 (30-236)||(37351420-37351627)
chr3 (30-243)||(31454287-31454502)
chr3 (65-236)||(21200561-21200733)
chr3 (32-233)||(11581460-11581662)
chr3 (72-241)||(39600785-39600955)
chr3 (53-141)||(26990322-26990410)
chr3 (85-248)||(50960754-50960914)
chr3 (65-243)||(49841625-49841801)
chr3 (30-132)||(27893207-27893309)
chr3 (86-243)||(38430854-38431012)
chr3 (65-233)||(39235154-39235323)
chr3 (72-164)||(43254977-43255069)
chr3 (180-242)||(3987054-3987116)
chr3 (72-228)||(7278481-7278637)
chr3 (55-139)||(2340804-2340888)
chr3 (81-204)||(31261055-31261178)
chr3 (180-232)||(31453151-31453203)
chr3 (179-243)||(49503766-49503830)
chr3 (106-236)||(50249397-50249531)
chr3 (176-248)||(54128379-54128451)
chr3 (104-238)||(46140443-46140578)
chr3 (65-139)||(40982007-40982081)
chr3 (85-248)||(19676198-19676361)
chr3 (144-243)||(19737003-19737103)
chr3 (144-243)||(19757906-19758006)
chr3 (85-169)||(23534687-23534771)
chr3 (176-248)||(52138801-52138873)
chr3 (144-250)||(41842687-41842794)
chr3 (77-155)||(22902893-22902971)
chr3 (183-248)||(28245438-28245503)
chr3 (65-133)||(29475805-29475871)
chr3 (65-205)||(46431776-46431911)
chr3 (72-204)||(48508280-48508413)
chr3 (90-233)||(659541-659685)
chr3 (65-113)||(36820074-36820122)
chr3 (178-242)||(39535651-39535715)
chr3 (85-243)||(42510133-42510290)
chr3 (65-235)||(45289188-45289359)
chr3 (176-236)||(48734344-48734404)
chr3 (82-141)||(11284102-11284160)
chr3 (199-250)||(31337758-31337809)
chr3 (181-236)||(38850133-38850188)
chr3 (186-257)||(50632054-50632125)
chr3 (72-118)||(21427686-21427732)
chr3 (81-139)||(46146207-46146265)
chr3 (176-257)||(344920-345001)
chr3 (171-232)||(29374951-29375012)
chr3 (179-248)||(35033147-35033216)
chr3 (66-139)||(37228193-37228266)
chr3 (107-140)||(40743287-40743320)
chr3 (85-133)||(41482255-41482304)
chr3 (179-243)||(26490321-26490385)
chr3 (180-236)||(33272235-33272291)
chr3 (85-133)||(33755459-33755507)
chr3 (176-248)||(38060432-38060504)
chr3 (179-243)||(47233808-47233872)
[»] chr6 (25 HSPs)
chr6 (30-236)||(10617296-10617500)
chr6 (85-236)||(9593825-9593975)
chr6 (30-243)||(7513451-7513667)
chr6 (104-257)||(21870201-21870363)
chr6 (85-248)||(31818533-31818696)
chr6 (174-257)||(33084050-33084133)
chr6 (36-233)||(7080356-7080554)
chr6 (39-130)||(38883-38974)
chr6 (32-163)||(8364643-8364774)
chr6 (65-118)||(1681618-1681671)
chr6 (66-246)||(6906926-6907106)
chr6 (81-241)||(24665818-24665980)
chr6 (72-169)||(4948408-4948505)
chr6 (72-169)||(4955379-4955476)
chr6 (65-133)||(34602-34670)
chr6 (65-160)||(35199719-35199814)
chr6 (65-139)||(1747738-1747812)
chr6 (181-250)||(2079339-2079408)
chr6 (72-139)||(43156-43224)
chr6 (104-154)||(3963895-3963945)
chr6 (170-248)||(5258351-5258429)
chr6 (81-139)||(33997657-33997715)
chr6 (209-242)||(6641651-6641684)
chr6 (179-248)||(28085377-28085446)
chr6 (144-243)||(14389344-14389443)
[»] scaffold0325 (1 HSPs)
scaffold0325 (65-243)||(11804-11982)
[»] scaffold0570 (1 HSPs)
scaffold0570 (84-248)||(1064-1229)
[»] scaffold0018 (3 HSPs)
scaffold0018 (91-257)||(43991-44158)
scaffold0018 (65-139)||(178517-178591)
scaffold0018 (179-248)||(31469-31538)
[»] scaffold0015 (1 HSPs)
scaffold0015 (65-133)||(66654-66722)
[»] scaffold0003 (1 HSPs)
scaffold0003 (65-205)||(346870-347011)
[»] scaffold1609 (1 HSPs)
scaffold1609 (74-126)||(1059-1111)


Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 257
Target Start/End: Complemental strand, 10272495 - 10272251
Alignment:
Q  13 atgaatcaaaggaccccagtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctagg 112  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10272495 atgaatcaaacgacaccggtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctagg 10272396  T
Q  113 tcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacaggtcttctctctacatgccaaaaccactttagtc 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10272395 tcttcccctacctctagtgatttgactcccatccatctgatctcctctccttcctacgaatccacaggtcttctctctacatgccaaaaccactttagtc 10272296  T
Q  213 tagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10272295 tagtttctaccatcttttctactacaggtgcaacccaaaatctct 10272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 40419859 - 40419652
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||| |||||||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||  ||||  ||||||| |||| |||||||||||||    
T  40419859 agtgatctatcaaaaaccatgtctttctccaactcatttatctctagatccttcataatagtttcttgtatagattttctatgtctacccctacctctag 40419760  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    | || | |||||  ||||||||| || |||||||| ||||  |||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||     
T  40419759 ttatctaactcccctccatctgaactactctccttgctacataatccacatgtcttctctctacatgcccaaaccacttaagtctagttactaccatcta 40419660  T
Q  229 ttctacta 236  Q
    ||||||||    
T  40419659 ttctacta 40419652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 28528575 - 28528385
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||| |||||||||||||| || ||||||| ||| |||||| |||||||||||||||||||||||| |||||  |||| ||||||||||||||| |||||    
T  28528575 agtggtctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttcccctacttctag 28528476  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttc 219  Q
     |||||||||||  ||||| |||||| || ||||| |||| ||||||||| |||||||| | ||||||| ||||||| | |||||||||||    
T  28528475 ggatttgactcccctccatttgatctactgtccttactacagaatccacaagtcttctcccgacatgccgaaaccacctaagtctagtttc 28528385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 214
Target Start/End: Original strand, 50771629 - 50771802
Alignment:
Q  41 aaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactc 140  Q
    |||||||| || ||||||| |||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||    
T  50771629 aaaaaccatgtctttctccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtcttcccctacctctagtcatttgactc 50771728  T
Q  141 ctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtcta 214  Q
    |  |||||||||||| |||||||| ||||  ||||||  ||||||||||||||| ||| ||||||| | ||||||    
T  50771729 ccctccatctgatctactctccttactacaaaatccatgggtcttctctctaca-gcccaaaccacctcagtcta 50771802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 243
Target Start/End: Original strand, 27637697 - 27637909
Alignment:
Q  34 ttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    ||||||||||||||| || ||||||| ||| ||| ||  ||||||||||||| ||||||||||| | |  |||| |||||||||||||||||||||||||    
T  27637697 ttctatcaaaaaccatgtctttctccaactcattgatcactagatccttcttgatagtttctctaaaagtttttttaggtcttcccctacctctagtgat 27637796  T
Q  134 ttgactcctatcc--atctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
    ||| ||||  |||  || |||||| |||||||| |||| | ||||||| ||||| |||||||||||| ||| ||| | ||||||||||||| ||||||||    
T  27637797 ttgcctccactccatatatgatctactctccttactacaacatccacatgtcttttctctacatgcccaaaacacctaagtctagtttctatcatctttt 27637896  T
Q  231 ctactacaggtgc 243  Q
    || ||| ||||||    
T  27637897 ctgctataggtgc 27637909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 43423902 - 43423726
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcc 166  Q
    |||| |||||||| |||||||| || |||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||||  ||| |||| ||| |    
T  43423902 taatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactactatccatctagtctactctacttac 43423803  T
Q  167 tac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||  |||| ||| |||||||||||||||| | ||||||| | || |||||||| |||||||||||||||| |||||    
T  43423802 tacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtg 43423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 248
Target Start/End: Complemental strand, 37263530 - 37263332
Alignment:
Q  50 gtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatc 149  Q
    |||||||||| ||| ||| || |||||||| ||||| |||||||| || |||   |||||||||||||||||||||||||||||||||| ||  ||||||    
T  37263530 gtgtttctccaactcattgatctctagatc-ttcttgatagtttcactaatagtatttctaggtcttcccctacctctagtgatttgacacccctccatc 37263432  T
Q  150 tgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||| | |||||||| |  | | ||||||| || ||||||||||||||| ||||||||  |||||||||||||| ||||||||||||| |||||| ||||    
T  37263431 tgatttactctccttaccgcaacatccacaagttttctctctacatgcccaaaccactgaagtctagtttctactatcttttctactataggtgctaccc 37263332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 232
Target Start/End: Complemental strand, 26016655 - 26016454
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    ||||||| ||||||||| || ||||||  ||| ||| || |||||||| ||| |||||||||||||||||  |||||||||||| | | |||||||||||    
T  26016655 tgttctaccaaaaaccatgtttttctctaactcatttatctctagatcattcctaatagtttctcttatagtttttctaggtctactcttacctctagtg 26016556  T
Q  132 atttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
    || |||||||  | ||||||||||  ||||||| |||| |||| || ||||||||| ||||||| || ||||||| | | ||||||||||||||||||||    
T  26016555 atctgactccccttcatctgatctaatctccttgctacagaatgcataggtcttctttctacatacccaaaccacctaaatctagtttctaccatctttt 26016456  T
Q  231 ct 232  Q
    ||    
T  26016455 ct 26016454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 3818953 - 3819132
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| |||||||||||||||||||||  ||||| ||||||||| ||  |||||||| ||||| | |  |||||||||||| ||||| ||    
T  3818953 attaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctctagtggtttgattaccctccatctgatctactctcttt 3819052  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
     |||  ||||||||| ||||||| |||||||||| ||||||||| ||||||||| | |||||||||||||| | ||||||    
T  3819053 actagagaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgc 3819132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 51584964 - 51584855
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||| | || |||||||  || |||||| || |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  51584964 agtgttctatcaaaaacaatgtctttctccagctcattaatgtccagatccctcttaatagtttctcttatagtttttctaggtcttcccctacctctag 51584865  T
Q  130 tgatttgact 139  Q
    ||||||||||    
T  51584864 tgatttgact 51584855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 15577603 - 15577434
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| |||||||||||||||||||||||| | |||| ||| |||||| |||||||||||||| |||   ||||||||||||||| ||||||||    
T  15577603 attaatctctatatccttcttaatagtttctcttattatttttttagatcttcctctacctctagtgatgtga---ctatccatctgatctactctcctt 15577507  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
     |||| |||||| || ||||||||| |||||||  ||||||| | |  | || ||| ||||||||||||||||    
T  15577506 actacagaatccgcatgtcttctctatacatgctcaaaccacctaatcccagcttccaccatcttttctacta 15577434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 12261778 - 12261971
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||||||||||||||| || ||||||| ||| ||||||  |||  | ||||||| ||||||||||||||  ||||||||||||| ||| |||||||||||    
T  12261778 gttctatcaaaaaccatgtctttctccaactaattaatccctaatttcttcttactagtttctcttatagtttttctaggtcttaccccacctctagtga 12261877  T
Q  133 tttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccat 225  Q
    ||||||||   |||||| ||||| | ||| || ||||  |||||| | |||||| ||| ||||||| ||||||| | |||||||||| ||||||    
T  12261878 tttgactctcctccatcagatctaccctcattactacaaaatccaaaagtcttccctccacatgcccaaaccacctaagtctagtttataccat 12261971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 43898444 - 43898310
Alignment:
Q  38 atcaaaaaccaggtgtttctcctacttattaatttctagatccttctt---aatagtttctcttataagttttctaggtcttcccctacctctagtgatt 134  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||   ||||||||||||||||  ||||| ||||||| |||||||| | ||||||    
T  43898444 atcaaaaaccatgtttttctccaactcattaatctctagatccttcttctaaatagtttctcttatagtttttccaggtctttccctacctttggtgatt 43898345  T
Q  135 tgactcctatccatctgatctcctctccttcctac 169  Q
    |||||||  |||||||||||| |||||||| ||||    
T  43898344 tgactcccctccatctgatctactctccttactac 43898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 2544761 - 2544591
Alignment:
Q  87 atagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttc 185  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||| |||||||    |||||||||||| |||||||| |||  ||||| | ||||||||    
T  2544761 atagtttctctgatagtttttctaggtcttcctctacctctagtg-tttgactatcctccatctgatctactctccttactatagaatctataggtcttc 2544663  T
Q  186 tctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||| | ||||||| | |||||  |||| |||||||||||||||| |||||| |||| || |||||    
T  2544662 tctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctaccccaactctct 2544591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 42501293 - 42501152
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| | |||||| ||||||||| |||||||||||  |||||||||| |||| ||||||||| |||||||||| |  ||||||||| || ||||||||    
T  42501293 attaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctctaatgatttgactaccctccatctgaactactctcctt 42501194  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
     |||| |||||||| |||||  |||||||||| | |||||||    
T  42501193 tctacagaatccacgggtctcttctctacatgtccaaaccac 42501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 52442632 - 52442721
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctc 161  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||| |||||||||| |||||||||||  |||||||||||| |||||    
T  52442632 tctagatccttcttgatagtttctcttatatttgttctaggtcttcctctacctctagagatttgactcccttccatctgatctactctc 52442721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 7083110 - 7083011
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||||||||| || | | || ||||||| ||| |||||| ||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  7083110 agtgttctatcataaccgatgtctttctccaactcattaatctctagttccatcttaatagtttctcttatagcttttctaggtcttcccctacctctag 7083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 40416556 - 40416377
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| | |||||| ||||||||||||| |||||||  ||||||||||||||  ||  || | ||||| |||||    | |||||||||| ||||||||    
T  40416556 attaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctttggtgatctgactatcctgcatctgatctactctcctt 40416457  T
Q  165 cctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
     |||| || || |||| ||||||||||||||||| ||||||| | || || ||||| |||||||||||||||| ||||||    
T  40416456 actacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgc 40416377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 32404623 - 32404801
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| ||| |||||||||||||||||  |||| |||||||||| |||||||| ||||| |||||    |||||||  ||| ||||||||    
T  32404623 attaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatcttctctactctcctt 32404722  T
Q  165 ccta-cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
     |||  ||||| |||||||||||||||||||  | ||||||| | || ||| |||| |||||||||| ||||| |||||    
T  32404723 actatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 38869059 - 38868898
Alignment:
Q  73 ctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cga 171  Q
    ||||||| ||||||||| |||||||||||  ||||||||||||||  || |||||| |||||||||| |  ||||||| |||| |||||||  |||  ||    
T  38869059 ctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctctaatgatttgactaccctccatctaatctactctcctcgctagaga 38868960  T
Q  172 atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    ||| ||  || ||||||||||||||| ||||||| | || | |||||| |||||||||||||    
T  38868959 atctactagtgttctctctacatgcccaaaccacctaagccgagtttccaccatcttttcta 38868898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 30834074 - 30834218
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||| |||||||||||||||||  ||||||||||||||| || ||||||  ||||||||| |  |||||||||||| ||||||||    
T  30834074 attaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgactaccttccatctgatctactctcctt 30834173  T
Q  165 ccta-cgaatccacaggtcttctctctacatgccaaaaccacttt 208  Q
      ||  |||||  || |||||||||||||| | | ||||||||||    
T  30834174 attatagaatctgcaagtcttctctctacacgaccaaaccacttt 30834218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 241
Target Start/End: Original strand, 13827706 - 13827844
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 202  Q
    ||||||||||||||| || ||||||||||| |||||    ||||| |||||| |||||||| |||| ||||| |||  ||||||||||||||| | ||||    
T  13827706 ttttctaggtcttcctctgcctctagtgatctgactatgttccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaac 13827805  T
Q  203 cactttagtctagtttctaccatcttttctactacaggt 241  Q
    ||| |||  |||||||| ||| |||||||||||| ||||    
T  13827806 caccttaccctagtttccaccgtcttttctactataggt 13827844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 48431510 - 48431675
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||| |||||||||||||||||||||  |||| | |||||||| |||||||| || ||  ||||    |||||||||||  ||||| || |||| |    
T  48431510 tctaaatctttcttaatagtttctcttatagtttttttgggtcttcctctacctcttgtaatccgactatcctccatctgatcaactctctttactacaa 48431609  T
Q  172 a-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    | || ||| |||||||||||||||||| ||||||| | || ||| |||| ||||||||||||||||    
T  48431610 aatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctacta 48431675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 853884 - 853956
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||| ||||||||||||||||||||||||| ||||  |||| |||||||||| || |||||||||||||||||    
T  853884 taatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgact 853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 17815656 - 17815576
Alignment:
Q  73 ctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgat 153  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||| | |||| | |||||||||| || ||||||||||    
T  17815656 ctagatctttctaaatagtttctcttataatttttctaggtcttcccttgcctccaatgatttgactactctccatctgat 17815576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 19969274 - 19969370
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctc 126  Q
    |||||||| ||||| |||| |  ||||||| ||| |||||| |||||||| || ||||||||||||||||||  |||||||||||||| ||||||||    
T  19969274 agtgttctgtcaaagaccatgaatttctccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttctcctacctc 19969370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 33560957 - 33561081
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcc 166  Q
    |||| |||||||| | |||||||||||| |||| |  ||||||||| ||||| || ||||||||||||||||| |  ||||||  |||| |||||||| |    
T  33560957 taatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcctctagtgatttgactaccctccatcatatctactctccttac 33561056  T
Q  167 tac-gaatccacaggtcttctctct 190  Q
    ||| ||||| |||||||||||||||    
T  33561057 tacagaatctacaggtcttctctct 33561081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 6025790 - 6025691
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| || ||| |||| |||||||||  ||||||||||||||| || ||||||||||||||||| |  | |||||||||| ||||||||    
T  6025790 attaatctctagatcttttttactagtatctcttatagtttttctaggtcttcctctgcctctagtgatttgactaccctacatctgatctactctcctt 6025691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 5338883 - 5338730
Alignment:
Q  91 tttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctc 189  Q
    |||||||||||  |||||||||||| |  || ||||||||||| ||| |    |||||||||||| |||||||| |||  | ||| ||||||||||||||    
T  5338883 tttctcttatagtttttctaggtctacttctgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtcttctctc 5338784  T
Q  190 tacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    | |||||| ||||||| | ||   |||||| |||||||||||||||| ||||||    
T  5338783 tgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgc 5338730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 8796394 - 8796253
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||||||||||||||||||| |  |||| | |||||||| || ||||||||||| |||||    |||||| ||| | ||||||||    
T  8796394 attaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactatcctccatccgatttactctcctt 8796295  T
Q  165 cctacgaatcc-acaggtcttctctctacatgccaaaaccac 205  Q
     ||||||| || ||| ||||| |||||||||| | |||||||    
T  8796294 actacgaaacctacatgtcttatctctacatgtccaaaccac 8796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 16943351 - 16943183
Alignment:
Q  73 ctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-ga 171  Q
    ||||||| ||||||||||||||||||||   ||| ||||||||||   | |||||||| |||||||  || | |||||||||| |||||| | || | ||    
T  16943351 ctagatctttcttaatagtttctcttatcgctttcctaggtcttcttttgcctctagttatttgaccactcttcatctgatctactctccatactgcaga 16943252  T
Q  172 atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    ||| | | |||||||| ||||| ||| ||||||| | | ||||||||| |||||||||||||||| ||||    
T  16943251 atctaaatgtcttctccctacacgcccaaaccac-taaatctagtttccaccatcttttctactataggt 16943183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 243
Target Start/End: Original strand, 27847924 - 27848081
Alignment:
Q  88 tagtttctcttataagttttcta-ggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttc 185  Q
    ||||||||||||||| ||||| | |||||||| ||||||||  |||  ||||||   |||||||||| | |||| | | |||| | ||| ||||||||||    
T  27847924 tagtttctcttataatttttcaaaggtcttcctctacctcttctgagctgactctcctccatctgatatactcttcatactacagcatctacaggtcttc 27848023  T
Q  186 tctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||| |||||| ||||||| | ||  || ||||||||||||||||||| ||||||||    
T  27848024 tctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgc 27848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 17640206 - 17640290
Alignment:
Q  121 tacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaacca 204  Q
    |||||||||||| ||||||||  |||||||||||| |||||||| ||||  ||||||| ||||| ||||||||||||| ||||||    
T  17640206 tacctctagtgaattgactcccctccatctgatctactctccttactacaaaatccacgggtctcctctctacatgcctaaacca 17640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 50806842 - 50806750
Alignment:
Q  77 atccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    ||||||||| ||||||||||||||   ||||||||||||||  |||| |||||||||||||||||  ||||| |||||| | |||||| ||||    
T  50806842 atccttcttgatagtttctcttattgtttttctaggtcttcatctacttctagtgatttgactcccctccatttgatctaccctccttactac 50806750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 8342978 - 8343049
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttg 136  Q
    |||||| |||||||| || ||||| ||||||||||||  ||||||||||||||| ||| |||||||||||||    
T  8342978 attaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctctagtgatttg 8343049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 8343062 - 8343133
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||||||||||||||| |  |||| | || |||||||| |||||||||||||||| |||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctactaaaggtg 8343133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 10569165 - 10569305
Alignment:
Q  62 cttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctc 161  Q
    ||||||||| |||||||| ||||||||||||||| ||||   ||||    || |||| || ||||||||||||||| | |  ||||||| |||| | |||    
T  10569165 cttattaatctctagatctttcttaatagtttcttttatttttttt----gtgttcctctgcctctagtgatttgattaccctccatctaatctaccctc 10569260  T
Q  162 cttcctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
    | | |||| ||||| |||||||||||||||||||||| |||||||    
T  10569261 cgtactacagaatctacaggtcttctctctacatgcccaaaccac 10569305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 39422177 - 39422311
Alignment:
Q  102 agttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaa 200  Q
    |||||||||| |||  |||||||||| |||||||||||||  ||||| ||||||  ||||||  ||||  |||| ||| |||||||||||||||| |  |    
T  39422177 agttttctagatctagccctacctctggtgatttgactcccctccatatgatctattctcctaactacataatctacatgtcttctctctacatgtc-ca 39422275  T
Q  201 accactttagtctagtttctaccatcttttctacta 236  Q
    | ||| | |||||||||||||| |||||||||||||    
T  39422276 agcacctaagtctagtttctactatcttttctacta 39422311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 38807775 - 38807952
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttct-aggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg 170  Q
    |||| ||||||  |||| |||||||||||| ||||||| ||||||||||||| ||||  |||| ||||||   |||||||| ||| |||| ||| | |||    
T  38807775 tctaaatcctttctaatggtttctcttata-gttttcttaggtcttcccctagctcttttgatctgactctcctccatctggtctactcttcttacgacg 38807873  T
Q  171 a-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
      ||| |  |||||||||| |||||||| ||||||  | |||||| ||||||||| ||||||||||| |||||| ||||    
T  38807874 gcatctaagggtcttctctttacatgcctaaaccatctaagtctattttctaccaacttttctactataggtgctaccc 38807952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 1210923 - 1210746
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  1210923 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 1210824  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  1210823 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1210746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 257
Target Start/End: Complemental strand, 9509483 - 9509310
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    ||||||||| |||||||  ||||||||||||||| ||||||||  | || ||||||   |||||||||||| ||||   | |||  | ||  || |||||    
T  9509483 taatagtttatcttatagtttttctaggtcttcctctacctcttctaatatgactctcctccatctgatctactctaagtactaaagcatataccggtct 9509384  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||||||| |||| || | || ||| ||| ||||||||||||||||| |||||| |||| || |||||    
T  9509383 tctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctaccccaactctct 9509310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 51602198 - 51602057
Alignment:
Q  108 ctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccact 206  Q
    ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||| ||| || ||||||||||||||||||| ||||||      
T  51602198 ctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaaaccatc 51602099  T
Q  207 ttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    | || ||| ||||||||| ||||||||||| |||||| ||||    
T  51602098 taagcctattttctaccaacttttctactataggtgctaccc 51602057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 29577239 - 29577307
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| |||||||| ||||||||||||| | || ||  ||||||||||||||| ||||||||||||||    
T  29577239 attaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 34792466 - 34792630
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtct 183  Q
    |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||  ||| || |||||    
T  34792466 taatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtct 34792565  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  34792566 tctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctaccc 34792630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 14225984 - 14226095
Alignment:
Q  123 cctctagtgatttgactcctatccatctgatctcctctccttcctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttcta 221  Q
    ||||||||||||||||| |  ||||| |||||| |||||||| |||| || || |||||  | ||||||||||||| ||||||| | || ||| |||| |    
T  14225984 cctctagtgatttgactacgctccatgtgatctactctccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttcca 14226083  T
Q  222 ccatcttttcta 233  Q
    ||||||||||||    
T  14226084 ccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 23791848 - 23791911
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
    |||||||| |||||||||||||||||  ||||||| | ||| |||| |||||||||||||||||    
T  23791848 aatccacatgtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctac 23791911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 44008757 - 44008690
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||| ||||  ||||||||||||| |  ||||||||||||||| || |||||||||||||||||    
T  44008757 tctagatctttctcgatagtttctcttagattttttctaggtcttcctctgcctctagtgatttgact 44008690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 49377470 - 49377419
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatct 155  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||||||||    
T  49377470 ttttctaggtcttcctctgcctctagtgatttgactactctccatctgatct 49377419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 18793201 - 18793255
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
    ||||||||||| |||||||||| ||  | ||||||||||||||||||||||||||    
T  18793201 gtcttctctctgcatgccaaaatcaactaagtctagtttctaccatcttttctac 18793255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 1661534 - 1661422
Alignment:
Q  144 tccatctgatctcctctccttcctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||||||  ||||| || ||| ||||| | |||||||||||||||||||  ||||||  | || ||| |||| |||||||||||||||| ||||||    
T  1661534 tccatctgatcagctctcattacta-gaatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgc 1661436  T
Q  244 aacccaaaatctct 257  Q
     |||| || |||||    
T  1661435 taccccaactctct 1661422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 8672096 - 8671919
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  8672096 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 8671997  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || | ||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  8671996 catctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 8671919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 13827926 - 13828007
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||||||||||||||||   ||||||| | |  |||||||| |||||||||||||||| ||||||  ||| ||||||||    
T  13827926 acaggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgctgccccaaatctct 13828007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 29807944 - 29807891
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctacca 224  Q
    |||||||| |||||||||||||||||| ||| ||| | ||||||||||||||||    
T  29807944 aatccacatgtcttctctctacatgcccaaatcacgtaagtctagtttctacca 29807891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 8203231 - 8203283
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttc 117  Q
    |||||| |||||||| || ||||||||||||||||||  ||||||||||||||    
T  8203231 attaatctctagatcttttttaatagtttctcttatagtttttctaggtcttc 8203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 16822177 - 16822289
Alignment:
Q  123 cctctagtgatttgactcctatccatctgatctcctctccttcctacgaatcc-acaggtcttctctctacatgccaaaaccactttagtctagtttcta 221  Q
    |||||||| |||||||| || |||||||  ||  |||||||| |||| |||   |||||||||||||||||||| | ||||||| | || | ||||||||    
T  16822177 cctctagtaatttgactactctccatctagtcatctctccttactacaaattatacaggtcttctctctacatgtccaaaccacctaagccgagtttcta 16822276  T
Q  222 ccatcttttctac 234  Q
    ||||||| |||||    
T  16822277 ccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 36339920 - 36339968
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  36339920 taatagtttctctgatagtttttctaggtcttcctctacctctagtgat 36339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 9599511 - 9599586
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    |||||||||||||| ||  ||||||||||||||| ||||||||  |||| ||||||   |||||||||||| ||||    
T  9599511 taatagtttctcttgtagtttttctaggtcttcctctacctcttatgatctgactctcctccatctgatctactct 9599586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 51440977 - 51441040
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||    
T  51440977 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 51441040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 990522 - 990728
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggt-cttcccctacctctagt 130  Q
    |||||||||| ||||||  ||||  ||| ||| |||||| ||||||||  ||| |||||||||||| |||  ||| | | || ||||| || |||  |||    
T  990522 tgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagtttctctaatagttttccaatgtgcttcctctgcctacagt 990621  T
Q  131 gatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttt 229  Q
    ||| |||||    ||||||| |||| |||||||| |||| ||||| | | ||||||||| ||||| || ||||||| | || ||| || |||||||||||    
T  990622 gatctgactatattccatctaatctactctccttgctacagaatctatatgtcttctctttacatacctaaaccacctgagcctatttcctaccatcttt 990721  T
Q  230 tctacta 236  Q
    |||||||    
T  990722 tctacta 990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 12231550 - 12231476
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| || ||||| ||||||||||| |||||||||  ||||||| || |||| | |||| |||||||||||||    
T  12231550 attaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctccacctttagtgatttgact 12231476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 15086004 - 15085935
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  15086004 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 15085935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 22090166 - 22090097
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||| ||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  22090166 ggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 22090097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 32231058 - 32231235
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| |||   |||     
T  32231058 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttatgacgg 32231157  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| ||| |||||||||||||||||| ||||||  | || ||| |||||||||  |||||||||| |||||| ||||    
T  32231158 catctacaagtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctaccc 32231235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 51812591 - 51812538
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||||||| ||| ||| | || |||||||| ||||||||||||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctacta 51812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 15242072 - 15242036
Alignment:
Q  199 aaaccactttagtctagtttctaccatcttttctact 235  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  15242072 aaaccaccttagtctagtttataccatcttttctact 15242036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 39140590 - 39140526
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||| ||||||| | || | | ||| | ||||||||||||||| ||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgc 39140526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 43375724 - 43375820
Alignment:
Q  105 tttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg-aatccacaggtcttctctctacatgccaaa 200  Q
    ||||||||||| || || ||||||||||||| |||     ||||||||||| ||||| || ||||  |||| | |||||||||||||||||||||||    
T  43375724 tttctaggtctccctctgcctctagtgattttactatccaccatctgatctactctctttactacataatctataggtcttctctctacatgccaaa 43375820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 53 - 259
Target Start/End: Complemental strand, 2713141 - 2712934
Alignment:
Q  53 tttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctga 152  Q
    ||||||| ||| ||| || ||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||   |||||||||    
T  2713141 tttctccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctga 2713042  T
Q  153 tctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaa 251  Q
    ||| ||||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||  |||| |||||| |||| ||    
T  2713041 tctactctccttcatacagaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctaccccaa 2712942  T
Q  252 atctctga 259  Q
     |||||||    
T  2712941 ctctctga 2712934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 31635982 - 31636201
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||| ||||||||| |||||||||| ||| ||| || |||| ||||||||| ||||||||||| |||  |||||||| |||||||||| ||||||    
T  31635982 agtgttctaccaaaaaccatgtgtttctccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctag 31636081  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    ||||||||||||   |||||| |||| |||||||| |||| | |||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  31636082 tgatttgactccccaccatctaatctactctccttactacaacatccacgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatctt 31636181  T
Q  229 ttctactacaggtgcaaccc 248  Q
    |||||||| |||||| ||||    
T  31636182 ttctactataggtgctaccc 31636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 242
Target Start/End: Complemental strand, 21952573 - 21952364
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    ||||||||||||||||| || ||||||| ||  |||||| ||||||||||||| |||||||||||  |||  ||||||||||||||||||||||||||||    
T  21952573 tgttctatcaaaaaccatgtctttctccaacccattaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtg 21952476  T
Q  132 atttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
    ||||||||||  ||||||||||||  ||||||| |||  ||||||||||| |||||||||||||| | ||||||| | |||||||||||| |||||||||    
T  21952475 atttgactcccctccatctgatctattctccttactatagaatccacaggacttctctctacatgtccaaaccacctgagtctagtttctgccatctttt 21952376  T
Q  231 ctactacaggtg 242  Q
    |||||| |||||    
T  21952375 ctactataggtg 21952364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 243
Target Start/End: Complemental strand, 14749527 - 14749313
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||||||||||||||||  | | | ||| |||  ||||| |||||||||||||| |||||||||||||||  ||||||||||||||| || ||| |||    
T  14749527 agtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctctgcctttag 14749428  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    ||||||||||||  |||||||||||  |||||||| | || |||||||||||||||||||||||||| | ||||||  | ||||||||||||||||  ||    
T  14749427 tgatttgactcccctccatctgatcgactctccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaattt 14749328  T
Q  229 ttctactacaggtgc 243  Q
    |||||||| ||||||    
T  14749327 ttctactataggtgc 14749313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 10082817 - 10083014
Alignment:
Q  40 caaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    ||||||||| || ||||||| ||| |||||| ||||||||||| ||| ||||||||||||||  ||||||||||||| ||||| |||| |||||||||||    
T  10082817 caaaaaccatgtctttctccaactcattaatctctagatccttgttactagtttctcttatagtttttctaggtcttaccctatctctggtgatttgact 10082916  T
Q  140 cctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactaca 238  Q
    ||  ||      |||| ||||| || |||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |    
T  10082917 cccctc------atctactctctttactacagaatccacaagtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactata 10083010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 1525861 - 1525659
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||||||||||||||| || ||||||| ||| ||| || ||| |||||||| |||||||||||||| ||  |||||||||||| ||||||||||||||||    
T  1525861 gttctatcaaaaaccatgtctttctccaactcatttatctctggatccttcctaatagtttctcttgtagtttttctaggtctacccctacctctagtga 1525762  T
Q  133 tttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttc 231  Q
    | ||||||   |||||||||||| |||||||  || | |||| ||| ||||||||||||||||| | || |||| | |||||||||||||||||||||||    
T  1525761 tctgactctcctccatctgatctactctcctaactgcagaattcacgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttc 1525662  T
Q  232 tac 234  Q
    |||    
T  1525661 tac 1525659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 42199471 - 42199299
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||| |||||||| ||| |||  ||||||||||||| | || || |||||||||||||| || ||||| |||||| ||||||||    
T  42199471 attaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctactctcctt 42199372  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
     |||| ||||| ||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||    
T  42199371 actacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 33667655 - 33667547
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||| || ||||||| ||| |||||| ||||||||||||||||||  ||||||||||  |||||||||||||||||||| |||||    
T  33667655 agtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaataacttctcttatagtttttctaggtcttcccctacatctag 33667556  T
Q  130 tgatttgac 138  Q
    |||||||||    
T  33667555 tgatttgac 33667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 11002483 - 11002713
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||| | |  ||||||| ||| ||| || |||||||| ||  ||||||||| |||||||  |||||||||||| |||| ||||||||    
T  11002483 agtgttctatcaaaaactatgcctttctccaactcatttatctctagatcgttactaatagtttgtcttatagtttttctaggtctaccccaacctctag 11002582  T
Q  130 tgatttgactcctatccatctgatctcctctcct--tcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatc 226  Q
    |||| |||||||  | |||||||||| ||| |||    |||| || ||||||| ||||||  ||||||||| ||||||| | |||||||||||||||||     
T  11002583 tgatctgactcccctacatctgatctactcccctaaaactacagagtccacagatcttctacctacatgcccaaaccacctaagtctagtttctaccatg 11002682  T
Q  227 ttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||  |||||| |||| || |||||    
T  11002683 ttttctactgtaggtgctacccgaactctct 11002713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 38684665 - 38684481
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||||||| |||||||||| ||  |||||||||||||||  ||| |||||||||| || |||  ||||||| || | ||||||||    
T  38684665 attaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttcctttacatctagtgattggaatcccctccatctaatatactctcctt 38684566  T
Q  165 ccta-cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     |||  |||| ||||||||||||||||||||||  |||||| || ||| ||||||| ||||||| || ||||| |||||| ||||    
T  38684565 actatagaatacacaggtcttctctctacatgctgaaaccatttaagtttagtttccaccatctattatactataggtgctaccc 38684481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 33667294 - 33667217
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| ||||    
T  33667294 aatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 33667217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 38578622 - 38578802
Alignment:
Q  69 atttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta 168  Q
    ||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||||||||||||||   || |||||||||  ||| ||  |||    
T  38578622 atttctagatccttcataatagtttctcttgtagtttttctaggtctacccctacatctagtgatttgactctcctcgatctgatctaatctgctaacta 38578721  T
Q  169 -cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
       |||| ||| ||||||||| |||||||  ||||||| | ||| |||||||||||||||||| || || |||||| ||||    
T  38578722 tataatctacatgtcttctctttacatgctcaaaccacctaagtttagtttctaccatcttttataatagaggtgctaccc 38578802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 7359353 - 7359534
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    |||||||||| |||||||  |||| |||||||||||||||   |||||||||  |||| || ||||||||||| |||||    |||||||||||| ||||    
T  7359353 acttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttcctctgcctctagtgatatgactatcctccatctgatctactct 7359452  T
Q  161 ccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||| |||| ||||| |||  ||||||||||||||||| ||||||| | |  ||| |||| ||||| |||||||||| |||||    
T  7359453 ccttactacagaatctacatatcttctctctacatgcc-aaaccacctaaacctattttccaccatattttctactataggtg 7359534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 250
Target Start/End: Original strand, 12576957 - 12577131
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||||||||||||| |||| ||  ||||||||||||||| || |||||||||||  |||| |  |||||||||||| ||||||||    
T  12576957 attaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctctagtgataggactaccctccatctgatctactctcctt 12577056  T
Q  165 cctacgaatccacaggtcttctctctacatg--ccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
     |||             ||||| ||||||||  || ||||||| | ||||||||||| ||||||||||||||||||||||| ||||||    
T  12577057 acta-------------cttctatctacatgcccccaaaccacataagtctagtttccaccatcttttctactacaggtgctacccaa 12577131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 18351013 - 18351189
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg- 170  Q
    |||||||  ||||||||||||||||||||| | ||||||| | |||| || ||||||||||||||| | |  ||| | |||||| ||||||||  | |      
T  18351013 tctagatttttcttaatagtttctcttata-gctttctagatgttcctct-cctctagtgatttgattaccctccttttgatctactctccttattgcat 18351110  T
Q  171 aatccacaggtcttctctctaca-tgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||| |||||||||||||||||| |||| ||||||| | || |||||||||||||| |||||||||| |||||| ||||    
T  18351111 aatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctaccc 18351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 14667956 - 14667755
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||||| ||| ||||||||||  |||||||||  |||| || ||||||||||| | |||   ||||||||||||| ||||||||    
T  14667956 attaatctctagatctttcttagtagcttctcttatagtttttctaggatttccgctgcctctagtgatataactataatccatctgatctactctcctt 14667857  T
Q  165 cctac-gaatccacaggtcttctctctacatg--------ccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatct 255  Q
     ||||  |||  ||| ||||||||||||||||        || ||||||| | |||||| |||| |||||||||||||||| |||||| |||| || |||    
T  14667856 actacataatgtacatgtcttctctctacatgcccaaagccccaaaccacctaagtctattttccaccatcttttctactataggtgctaccccaactct 14667757  T
Q  256 ct 257  Q
    ||    
T  14667756 ct 14667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 229
Target Start/End: Complemental strand, 21916097 - 21915901
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||||||||||||  | || ||||||| ||| ||| || |||||||||||| |||| |||||||||||   ||||||  ||| | ||||| |||||||||    
T  21916097 gttctatcaaaaataatgtatttctccaactcatttatctctagatccttcctaattgtttctcttatcgtttttctgtgtc-taccctatctctagtga 21915999  T
Q  133 tttgactcctatccatctgatctcctctccttcct-acgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttt 229  Q
    | ||||| |  ||||| |||||| |||||||  || |  ||| |||| ||||| |||||||||||  ||||||| | ||||||||||||| |||||||    
T  21915998 tctgacttccctccatatgatctactctcctaactaaataatacacaagtcttttctctacatgcttaaaccacctaagtctagtttctatcatcttt 21915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 225
Target Start/End: Original strand, 34734461 - 34734655
Alignment:
Q  35 tctatcaaaaaccaggtgtttctcctacttattaatttctagat--ccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    ||||||||||| || || ||||||| ||| ||| || |||||||  ||||| ||||||||| || ||||  |||||||| ||| ||| |||||| |||||    
T  34734461 tctatcaaaaatcatgtctttctccaactcatttatctctagatatccttcataatagtttatcgtatagtttttctagatctacccgtacctccagtga 34734560  T
Q  133 tttgactcctatccatctgatctcctctccttc--ctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccat 225  Q
    | |||||||  | ||| ||||||  |||||||   ||||  ||| ||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  34734561 tctgactccccttcatttgatctattctccttaatctacataattcacagatcttctctctacatgcc-aaaccatcttagtctagtttctaccat 34734655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 43475346 - 43475246
Alignment:
Q  144 tccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||| |||||||| |||| | ||| |||||||||||||||  || || ||||||| | || |||||||| |||||||||||||||| |||||    
T  43475346 tccatctgatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtg 43475247  T
Q  243 c 243  Q
    |    
T  43475246 c 43475246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 3775180 - 3775247
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccat 148  Q
    ||||||||||||| |||||||  ||||||||||||||  || ||||||||||||||||| ||||||||    
T  3775180 ttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatttgactactatccat 3775247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 6889178 - 6889011
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| ||| |||||||||||||||||  ||||||||| ||||| || |||| |||| |||||||    ||||||| || |  | |||||    
T  6889178 attaatctctaaatctttcctaatagtttctcttatagtttttctaggccttcctcttcctcaagtggtttgactatcctccatctaatttattgtcctt 6889079  T
Q  165 cctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttc 231  Q
     | ||  |||||||| |||||||||||||||| | ||||||||| || ||| |||| |||||||||||    
T  6889078 accacataatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttc 6889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 15489605 - 15489759
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacag 179  Q
    ||||||||||||||||||||   ||||||||||||||| || ||||||||||||  |||    ||||||| |||| ||||||||  |||  |||| |||     
T  15489605 ttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatctacaa 15489704  T
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
     ||||||||||||||||| ||||||  | ||   |||||| ||||||||||||||    
T  15489705 atcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctac 15489759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 18698977 - 18698891
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgat 153  Q
    |||| |||||||| ||||| |||  ||||||||||  |||||||||| |||| || ||||||||||||||||| || ||||||||||    
T  18698977 taatctctagatctttcttgatacattctcttatagtttttctaggtattcctctgcctctagtgatttgactactctccatctgat 18698891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 4496562 - 4496385
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  4496562 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 4496463  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  4496462 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctaccc 4496385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 6859546 - 6859425
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    |||||||||||||||||  ||||||||||||||| || ||||||||| |||||||    ||||||| || |  || |||| |||| ||||||||| ||||    
T  6859546 taatagtttctcttatagtttttctaggtcttcctcttcctctagtggtttgactatcctccatctaatttattccccttactacagaatccacaagtct 6859447  T
Q  184 tctctctacatgccaaaaccac 205  Q
    ||||||||| || | |||||||    
T  6859446 tctctctacgtgtccaaaccac 6859425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 37065608 - 37065535
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||||  ||||||||||||||||| |||  ||   |||||||||||||||||||||||||||| ||||||    
T  37065608 gaatccacatttcttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtgc 37065535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 42199578 - 42199483
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    |||||| |||||||| |||| |||||||| ||| |||  ||||||||||||| | || || |||||||||||||| || ||||| |||||| ||||    
T  42199578 attaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctactct 42199483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 234
Target Start/End: Complemental strand, 17213290 - 17213092
Alignment:
Q  34 ttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    ||||||||||||  | || ||||||  ||| |||||| ||||||||||| |||||||||| |||| ||  ||||||| || ||| || || |||||||||    
T  17213290 ttctatcaaaaattatgtctttctctaactcattaatctctagatccttgttaatagtttttcttctagtttttctaagttttctcccacatctagtgat 17213191  T
Q  134 ttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttct 232  Q
    ||| ||||| | ||| |||||  || ||||| ||||  ||| |||  ||||||| || || ||| |||||||| | |||| ||||||||| |||||||||    
T  17213190 ttggctcctct-catttgatccactttccttactacaaaattcac--gtcttctttcaacgtgcaaaaaccacctaagtcgagtttctacaatcttttct 17213094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 28676666 - 28676608
Alignment:
Q  178 aggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||||||||||| ||||||| | || ||| |||| ||||||||||||||||    
T  28676666 aggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctacta 28676608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 36123279 - 36123353
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||||||||| || ||||| ||||||  ||||||| |||||||  |||||||||||||| ||||    
T  36123279 attaatctctagatccttcttgatggtttcccttatagcttttctaagtcttcctttacctctagtgattcgact 36123353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 1287683 - 1287860
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  1287683 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 1287782  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| ||  |||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  1287783 catctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1287860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 1935342 - 1935273
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctctta 99  Q
    |||||||| |||||||||  || ||||||| ||| ||| || |||||||||||| |||||||||||||||    
T  1935342 agtgttctgtcaaaaaccttgtctttctccaactcatttatctctagatccttcctaatagtttctctta 1935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 15168870 - 15168793
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||| ||||||| | |||| ||||| | ||||||| |||| ||| ||||||||||||||||||||| |||||| ||||    
T  15168870 aatctacaggtcatttctcaacatgtccaaaccaccttagcctattttctaccatcttttctactataggtgctaccc 15168793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 24178688 - 24178511
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  24178688 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 24178589  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||| ||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  24178588 catctacgggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 24178511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 29922502 - 29922409
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacct 125  Q
    |||||||||  ||||||||| |   ||| |||| ||||| |||| ||| |||||||||||||||||||||  |||||||| |||||| ||||||    
T  29922502 tgttctatcgtaaaccaggtttcagtccaacttgttaatctctaaatctttcttaatagtttctcttatagtttttctagatcttcctctacct 29922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 15369910 - 15369969
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcc 141  Q
    |||||||||||||||||||||  ||||||||||| | || ||||||||||||| |||||||    
T  15369910 ttcttaatagtttctcttatactttttctaggtc-taccatacctctagtgatatgactcc 15369969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 37065696 - 37065632
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttc 94  Q
    |||| |||||||||||||| || ||||||| ||| ||| || |||||||||||| ||||||||||    
T  37065696 agtgctctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttc 37065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 28071 - 27992
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactc 140  Q
    |||||||||  |||| ||| ||| |||||||||||||||||  ||||||||||||||| | ||||||  |||| ||||||    
T  28071 acttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctcaacctcttttgatctgactc 27992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 1174701 - 1174642
Alignment:
Q  38 atcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctct 97  Q
    ||||||||||| || ||||||  ||| |||||| ||||||||||||||||||| ||||||    
T  1174701 atcaaaaaccatgtctttctcaaactcattaatctctagatccttcttaatagattctct 1174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 1275332 - 1275265
Alignment:
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1275265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 16134282 - 16134389
Alignment:
Q  97 ttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacaggtcttctctctacatgc 196  Q
    |||||| ||||||| |||  ||||||||||||||||| |||||||  ||||| || | | |||||||  |||| |||| ||| |||||||||||  ||||    
T  16134282 ttataatttttctatgtcgacccctacctctagtgatctgactcccctccatatggtatactctcctaactacaaatcaacaagtcttctctcttgatgc 16134381  T
Q  197 caaaacca 204  Q
    | ||||||    
T  16134382 ctaaacca 16134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 27998626 - 27998567
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacc 124  Q
    |||||| | |||||| |||||| ||||||||||||||  ||||||||||||||| |||||    
T  27998626 attaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctctacc 27998567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 34273099 - 34273028
Alignment:
Q  177 caggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||||| ||||||  | || ||| ||||||||| |||||||| || |||||| ||||    
T  34273099 caggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctaccc 34273028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 7678663 - 7678589
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| |||| |||||||||||||||   ||| |||| |||||| || ||||||||||| |||||    
T  7678663 attaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgact 7678589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 4026538 - 4026603
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
    ||||| |||||||| ||||||||||| | ||||||| | || |||||||| |||||||||| ||||    
T  4026538 gaatctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatcttttttact 4026603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 9235232 - 9235166
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| |||| ||| |||||||||||||||||  ||  ||||||||||||||| || |||||||||||    
T  9235232 attaatctctatatctttcttaatagtttctct--tagtttttctaggtcttcctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 12492596 - 12492653
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| |||||||||||    
T  12492596 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctacta 12492653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 16347590 - 16347659
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  16347590 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 16347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 28977071 - 28977140
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||  ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  28977071 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 28977140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 38685037 - 38684968
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  38685037 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 38684968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 2066182 - 2066130
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttc 117  Q
    |||||| |||||||| || ||| |||||||| |||||| ||||||||||||||    
T  2066182 attaatctctagatcttttttagtagtttcttttataatttttctaggtcttc 2066130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 8492430 - 8492508
Alignment:
Q  65 attaatttctagatccttcttaa---tagtttctcttataagttttctaggtcttcccctacctctagtgatttgactc 140  Q
    |||||| ||||||||||||||||   ||||||| ||||||  |||||||| | ||| |||||||| |||||||| ||||    
T  8492430 attaatctctagatccttcttaatactagtttcccttatagtttttctagcttttctcctacctcaagtgatttaactc 8492508  T

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Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 30 - 236
Target Start/End: Original strand, 44437783 - 44437990
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||| || ||||||| ||| ||| || ||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||    
T  44437783 agtgttctatcaaaaaccatgtttttctccaactcatttatctctagatccttcttaatagtttctcatatagtttttctaggtctacccctacctctag 44437882  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    |||| |||||||  ||||||| ||||   ||||||  ||| ||||||||| |||||||||||||||||| ||||||| |  |||||||||||||||||||    
T  44437883 tgatctgactcccctccatctcatctatactccttattacagaatccacaagtcttctctctacatgccgaaaccacctatgtctagtttctaccatctt 44437982  T
Q  229 ttctacta 236  Q
    ||||||||    
T  44437983 ttctacta 44437990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 42543452 - 42543263
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    ||||||||||||| || || ||||||| ||| ||| || |||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||    
T  42543452 gttctatcaaaaagcacgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtga 42543353  T
Q  133 tttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttcta 221  Q
    | |||||||  ||||| |||||| |||||||  |||| ||||||||||||||||||| |||||||| ||||||| | ||| |||||||||    
T  42543352 tctgactcccctccatttgatctactctcctaactacagaatccacaggtcttctctgtacatgcccaaaccacctaagtttagtttcta 42543263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 19235081 - 19235212
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||| ||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||  |||||||||||| ||||| ||    
T  19235081 attaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctagtgatttgactcccctccatctgatctactctcttt 19235180  T
Q  165 cctac-gaatccacaggtcttctctctacatg 195  Q
     |||| |||||| |||||||||||| ||||||    
T  19235181 actacagaatccgcaggtcttctctttacatg 19235212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 5759057 - 5759189
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||| || ||||||| ||| ||| || ||||||||||||||  |||||||||| |||  |||||||||| || ||||||||||||    
T  5759057 agtgttctatcaaaaaccatgtctttctccaactcattgatctctagatccttcttggtagtttctctaatagtttttctaggtatttccctacctctag 5759156  T
Q  130 tgatttgactcctatccatctgatctcctctcc 162  Q
    |||||||| |||  |||||||||||| ||||||    
T  5759157 tgatttgattcccctccatctgatctactctcc 5759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 250
Target Start/End: Original strand, 23714384 - 23714544
Alignment:
Q  91 tttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg-aatccacaggtcttctctc 189  Q
    |||||||||||  ||||||| ||||||  |||| |||||||||||||||||   |||| |||||| |||||||| ||||  |||||||| ||||||||||    
T  23714384 tttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctccttactacataatccacaagtcttctctc 23714483  T
Q  190 tacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
    |||||||| |||| || | ||||||||||| |||||||||||||||| | |||| ||||||    
T  23714484 tacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctacccaa 23714544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 250
Target Start/End: Original strand, 24102056 - 24102216
Alignment:
Q  91 tttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg-aatccacaggtcttctctc 189  Q
    |||||||||||  ||||||| ||||||  |||| |||||||||||||||||   |||| |||||| |||||||| ||||  |||||||| ||||||||||    
T  24102056 tttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctccttactacataatccacaagtcttctctc 24102155  T
Q  190 tacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
    |||||||| |||| || | ||||||||||| |||||||||||||||| | |||| ||||||    
T  24102156 tacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctacccaa 24102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 38435137 - 38434943
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||||||||||||||||| ||  |||||||||||| || || ||||||||||| |||||    ||||| |||||| ||||||||    
T  38435137 attaatctctagatctttcttaatagtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactatcctccatatgatctactctcctt 38435038  T
Q  165 cct-acgaatccacaggtcttctctctacatgccaaaacca-ctttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
     || | | ||| ||| ||||||||| |||||||| |||||| |   ||||||||||| |||||||||||||||| |||||| |||| || |||||    
T  38435037 actaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctaccccaattctct 38434943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 4598624 - 4598852
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||| | | || ||||||| ||| ||| || |||||||||||| |||||| ||||| ||||  |||||||||| | || ||||||||||    
T  4598624 agtgttctatcaaaatctatgtctttctccaactcatttatctctagatccttcctaatagcttctcgtatagtttttctaggtttaccactacctctag 4598723  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    |||  |||||||  ||||| | ||||  | | ||| ||||  ||| |||| ||||||| |||| ||| | |||||||   ||||||||||||||||||||    
T  4598724 tgacctgactcccctccattttatctgttatacttactacaaaattcacaagtcttctttctatatgtccaaaccaccaaagtctagtttctaccatctt 4598823  T
Q  229 ttctactacaggtgcaacccaaaatctct 257  Q
    | |||||| |||||| |||| || |||||    
T  4598824 tactactataggtgctaccccaactctct 4598852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 248
Target Start/End: Complemental strand, 12141709 - 12141545
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    |||||||||||| ||||  ||||||||||||||| |||||||| || ||||||||    || ||||||||| |||||||| |||  ||||| ||||||||    
T  12141709 taatagtttctcctatagcttttctaggtcttcctctacctcttgtaatttgactatcctcaatctgatctactctccttactagagaatctacaggtct 12141610  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||| ||||| |||| ||||||| | || ||  |||| |||||||||||||||| |||||| ||||    
T  12141609 tctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctaccc 12141545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 37481722 - 37481886
Alignment:
Q  73 ctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-ga 171  Q
    ||||||| ||||||||||||||||| |||  |||||| |||||||  ||||||| |||||| | |||||  |||||||||||| |||||||  ||||  |    
T  37481722 ctagatctttcttaatagtttctctaatagtttttcttggtcttcatctacctccagtgatctaactcccctccatctgatctactctcctaactacaaa 37481821  T
Q  172 atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    || |||| |||||||||||||||||  ||||||| | || |||| ||| |||||||||| |||||    
T  37481822 attcacaagtcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttacta 37481886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 12489864 - 12489967
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||| |||||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||| ||||  |||||||||||| ||||||| |||||    
T  12489864 agtgttatatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttctcatatagtttttctaggtctacccctacttctag 12489963  T
Q  130 tgat 133  Q
    ||||    
T  12489964 tgat 12489967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 43832283 - 43832128
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| ||||||||||||||||||||||||||||||  || | |||||||||| || | |||| |||||||| | || |||||||||||| |||||||     
T  43832283 attaatctctagatccttcttaatagtttctcttatagtttgtttaggtcttcctctgcgtctactgatttgattactctccatctgatctactctccta 43832184  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttc 219  Q
     ||||  |||||||| || |||||| |||||||| ||| ||| | || ||||||||    
T  43832183 actacataatccacatgttttctctgtacatgcccaaatcacctaagcctagtttc 43832128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 26784437 - 26784569
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| |||||||||||||||||||||  ||||||||||||| | || ||||||||||||||||| |  ||||||| |||| | ||||||    
T  26784437 attaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctagtgatttgactaccctccatcttatctaccctcctt 26784536  T
Q  165 cctac-gaatccacaggtcttctctctacatgc 196  Q
     ||||  ||||||||  ||||||||||| ||||    
T  26784537 actacaaaatccacatatcttctctctaaatgc 26784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 33594335 - 33594534
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||| |||||||  | ||||||| ||||||| || |||  ||| ||| |||||||||||||||||| |||||||  | || ||||||||||||    
T  33594335 agtgttctatccaaaaccatttctttctccaacttatttatctctgtatctttcataatagtttctcttataatttttctatat-ttaccctacctctag 33594433  T
Q  130 tgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
     ||  | ||||   | ||||||||||  ||||||| ||| | |||||||| |||||||||||||||||  |||||| || |||| | |||||||||||||    
T  33594434 cgacctaactctccttcatctgatctattctccttactaccaaatccacatgtcttctctctacatgctcaaacca-ttaagtcaaatttctaccatctt 33594532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 43752044 - 43752237
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||||||| | ||| ||| ||||||||||||| |||  |||||||||||||||  | |||| |||||| ||| |    |||||||||||| |||||| |    
T  43752044 attaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttcctatgcctccagtgatctgagtatcctccatctgatctactctccct 43752143  T
Q  165 cctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
     ||||  |||| | |||||||||||||||||| | ||| ||| | || ||| ||||||||| ||||||||||| |||||| |||| || |||||    
T  43752144 actacataatctataggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctaccccaactctct 43752237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 38860356 - 38860186
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||||||| |||||||||||||||||||| | ||||| | ||||||  || |||||||| |||||||| |  ||||||| |||| |||||||||||||      
T  38860356 tctagatctttcttaatagtttctcttatcatttttccaagtcttcgtctgcctctagtaatttgactaccctccatctcatctactctccttcctacat 38860257  T
Q  171 aatc-----cacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||      ||||||||||| |||| ||||| ||||||| | || ||| |||| || |||||||||||||    
T  38860256 aatctatagtacaggtcttctttctaaatgcctaaaccacctaagcctattttccacaatcttttctacta 38860186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 33287606 - 33287553
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcc 118  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  33287606 attaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcc 33287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 33504401 - 33504312
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctc 161  Q
    |||||||| |||||||||||||||||||||  |||||||||| || | || ||||||||||| ||||| |  |||||||||||| |||||    
T  33504401 tctagatctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctgactaccctccatctgatctactctc 33504312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 18188937 - 18188863
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| |||| ||||||||||||||||| ||||||| |||| ||  | |||||||||||||||||    
T  18188937 attaatctctagatctttctgaatagtttctcttataatttttctaagtctccctttgcctctagtgatttgact 18188863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 9556433 - 9556637
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||| ||||||  | ||  ||| ||| ||||||  ||||||| ||||||||||||| |||||||  ||||| |||||||||  | ||||||||     
T  9556433 tgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttcctttgcctctagta 9556532  T
Q  132 atttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
     |||||||    |||||||||| | || | ||| |||| ||||| ||  |||||||||||||||||| ||||||| | || ||| |||| ||||| ||||    
T  9556533 gtttgactatcctccatctgatatacttttcttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat-tttt 9556631  T
Q  231 ctacta 236  Q
    ||||||    
T  9556632 ctacta 9556637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 8180857 - 8180781
Alignment:
Q  172 atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||||||||||| ||||||  | ||  || ||||||||| ||||||||||| |||||| ||||    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctaccc 8180781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 13240927 - 13241011
Alignment:
Q  150 tgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    |||||| |||||||| |||  ||||| ||| |||||||||||||||||| ||||||| | || |||||||| |||||||||||||    
T  13240927 tgatctactctccttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 241
Target Start/End: Original strand, 14197313 - 14197437
Alignment:
Q  123 cctctagtgatttgactcctatccatctgatctcctctccttcctac-----gaatccacaggtcttctctctacatgccaaaaccacttta-gtctagt 216  Q
    ||||||||||||||||| || ||||||||| || |||||||| |||      ||||| ||| |||||| ||||||||||| ||||||| | | | |||||    
T  14197313 cctctagtgatttgactactctccatctgacctactctccttactagttagagaatctacaagtcttcactctacatgcccaaaccacctaaagcctagt 14197412  T
Q  217 ttctaccatcttttctactacaggt 241  Q
    ||| |||||||||||||||| ||||    
T  14197413 ttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 25834758 - 25834682
Alignment:
Q  172 atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 25834682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 37470230 - 37470329
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| ||||||||  || |||||||||||||||||  ||||  ||||||||| ||||| |||||||| ||||| |  ||||||| |||| ||||||||    
T  37470230 attaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctaccactagtgatctgactaccttccatctaatctactctcctt 37470329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 2610766 - 2610589
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttc-taggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg 170  Q
    |||| ||||||  |||| |||||||| ||| |||||| |||||||||| ||||||||  | | |||||||  |||||| |||||| |||| ||| | |||    
T  2610766 tctaaatcctttctaatggtttctctaata-gttttcataggtcttcctctacctcttttaacttgactctcatccatttgatctactcttcttaccacg 2610668  T
Q  171 a-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    | ||| ||  |||||||||||||||||| ||||||  | || ||| ||||||||| |||||| |||| |||||| ||||    
T  2610667 acatctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctaccc 2610589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 26670953 - 26670888
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagt 130  Q
    |||||| |||| ||| ||||||||||||||| |||||  |||| |||||||||| |||||||||||    
T  26670953 attaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctctagt 26670888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 28960273 - 28960342
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctctta 99  Q
    |||| ||||||||||||||  | ||||||| ||| ||| || |||||||||||||||| |||||||||||    
T  28960273 agtgctctatcaaaaaccatatctttctccaactcatttatctctagatccttcttaacagtttctctta 28960342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 37332976 - 37333029
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    |||||||||||||||||| |||| |||||  ||||||||||| |||||||||||    
T  37332976 gtcttctctctacatgccgaaacaactttgatctagtttctatcatcttttcta 37333029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 233
Target Start/End: Complemental strand, 42092702 - 42092533
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| || ||||||||||||| ||||  |||||||||||| ||  |  || |||||| |||||| |  ||||||| |||| ||||||||    
T  42092702 attaatctctacatcttttttaatagtttctcctatagtttttctaggtctacctgtctctatagtgaattgactaccctccatctaatctactctcctt 42092603  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
     ||||  |||| ||| | |||||||||||||||| | | ||| | |   |||||||||||||||||||||    
T  42092602 actacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttcta 42092533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 4481651 - 4481599
Alignment:
Q  87 atagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||||||||||| ||||||||||||||| | |||||||| | |||||||    
T  4481651 atagtttctcttataatttttctaggtcttcctccacctctagcggtttgact 4481599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 7293748 - 7293689
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcct 163  Q
    |||||||||| | |||||||||||||||||  |||| || |||||||||||| |||||||    
T  7293748 ttttctaggtttacccctacctctagtgatccgacttctctccatctgatctactctcct 7293689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 190
Target Start/End: Original strand, 7431986 - 7432117
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcc-----cctacctctagtgatttgactcctatccatctgatctcctc 159  Q
    |||||| |||||||||||||||||||||||||  |||  |||||||||| ||||     ||| ||||||||||| ||||| || ||||||| || |  ||    
T  7431986 attaatctctagatccttcttaatagtttctccaatagtttttctaggttttcctcttgcctgcctctagtgatctgactactctccatctaatttattc 7432085  T
Q  160 tccttcct-acgaatccacaggtcttctctct 190  Q
    ||||| || | ||||| ||| |||||||||||    
T  7432086 tccttactaaggaatctacaagtcttctctct 7432117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 37452290 - 37452397
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||| ||||||  | | | ||| ||| |||||| ||||  || |||||||||| | ||||||||| ||||||||||||||| || ||||| |||    
T  37452290 tgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttcctcttcctcttgtg 37452389  T
Q  132 atttgact 139  Q
    || |||||    
T  37452390 atctgact 37452397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 41779207 - 41779282
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataa-gttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| || |||||| ||||||||||||  ||||||| |||||||||| | || ||||||||||||    
T  41779207 attaatctctagatcttttttaataatttctcttataattttttctaagtcttcccctgcgtcaagtgatttgact 41779282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 45077861 - 45077744
Alignment:
Q  144 tccatctgatctcctctccttcctacgaa-tccacaggtcttctctctacatgccaaaaccactt---tagtctagtttctaccatcttttctactacag 239  Q
    |||||||||||| |||||||| |||| || || ||| || ||||||||||||||||||||||| |    |||||| | || |||||||||||||||| ||    
T  45077861 tccatctgatctactctccttactacaaaatctacaagttttctctctacatgccaaaaccacctcccaagtctactctccaccatcttttctactatag 45077762  T
Q  240 gtgcaacccaaaatctct 257  Q
     ||| || |||| |||||    
T  45077761 atgctactcaaactctct 45077744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 3481247 - 3481185
Alignment:
Q  144 tccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
    |||||||||||| |||||||| |||| ||||| | |||||||||||||||||| | |||||||    
T  3481247 tccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaaccac 3481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 248
Target Start/End: Complemental strand, 36183630 - 36183452
Alignment:
Q  71 ttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg 170  Q
    ||||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| | |||| |||| ||| | |||    
T  36183630 ttctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacg 36183531  T
Q  171 a-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
      ||| || ||||||||||||||||||| ||||||  | ||  || ||||||||| ||||||||||| |||||| ||||    
T  36183530 gcatctacgggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctaccc 36183452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 37332357 - 37332419
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    ||||| || |||||||||||| ||||| |||| |||||  ||||||||||| |||||||||||    
T  37332357 aatcctcacgtcttctctctatatgccgaaacaactttgatctagtttctatcatcttttcta 37332419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 41763251 - 41763317
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||| |||| | ||||||| | || ||| ||||||||| ||||||||||| |||||    
T  41763251 acaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtg 41763317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 45640618 - 45640656
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctctta 99  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  45640618 acttattaatctctagatctttcttaatagtttctctta 45640656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 2807630 - 2807565
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagt 130  Q
    |||||| ||| |||||||||| ||| |||||||||||| |||||||| |||| | ||| |||||||    
T  2807630 attaatctctggatccttcttgataatttctcttataatttttctagatctttctctatctctagt 2807565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 3866250 - 3866073
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| |||||| |||| ||||||||  | ||||| |||   ||||| |||||| |||| ||| | ||||    
T  3866250 tctaaatcctttctaatggtttctctaatagttttcctaggttttcctctacctcttttaatttgtctctcctccatttgatctactcttcttaccacga 3866151  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||||||||||  ||||||  | || ||| ||||||||| ||||| ||||| |||||| ||||    
T  3866150 catctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactataggtgctaccc 3866073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 38452897 - 38452954
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| |||||||||||    
T  38452897 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctacta 38452954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 43238305 - 43238374
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||| |||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 43238374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 440905 - 440829
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttga 137  Q
    |||||||||| | |||||| || || || |||| || |||||  |||||||||||||| || |||||||||||||||    
T  440905 acttattaatctatagatcattgttgattgtttatcctataatctttctaggtcttcctctgcctctagtgatttga 440829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 1626380 - 1626344
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttata 101  Q
    |||||| |||||||| |||||||||||||||||||||    
T  1626380 attaatctctagatctttcttaatagtttctcttata 1626344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 11017384 - 11017320
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||| |||| || ||||||||| || | |||||| || ||||||||||||| ||||||    
T  11017384 ggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactataggtgc 11017320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 36870036 - 36869976
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||| |||||||||| ||||||||||||||  |||||||| ||||||  | ||||||||||    
T  36870036 tctaaatccttcttattagtttctcttatagtttttctagctcttcctatgcctctagtga 36869976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 40759169 - 40759113
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||||||||  ||||||| | | ||||||||| ||||| ||||||||||    
T  40759169 gtcttctctctacatgcacaaaccacctaactctagtttccaccattttttctacta 40759113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 32043827 - 32043597
Alignment:
Q  13 atgaatcaaaggaccccagtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctagg 112  Q
    |||||||||| | ||  ||||||||||||||||||| || ||||||| ||| ||| || | |||||||||||| ||||||||||| |||  |||| ||||    
T  32043827 atgaatcaaacggccatagtgttctatcaaaaaccatgtctttctccaactcattgatctttagatccttcttgatagtttctctaatagtttttttagg 32043728  T
Q  113 tcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagt 211  Q
    |||||||||||||||||||||||||| ||  ||||||||||||  ||||||| |||| | |||||||||||||||||||||||| | |||||||   |||    
T  32043727 tcttcccctacctctagtgatttgacacccctccatctgatctattctccttactacaacatccacaggtcttctctctacatggccaaaccaccaaagt 32043628  T
Q  212 ctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||||||| ||||| |||||    
T  32043627 ctagtttctaccatcttttgtactataggtg 32043597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 222
Target Start/End: Complemental strand, 16351597 - 16351405
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||||||| |||||||| || ||||||  ||| |||||| |||||||||||||||||||||||||| |||  |||||||||||||| |||| ||| ||    
T  16351597 agtgttctattaaaaaccatgtctttctca-actcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttctcctatctcaag 16351499  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctac 222  Q
    ||| ||||||||  |||||||||||| |||||||| ||||   ||||| | || ||||||||||||||| |||||||   ||||||||||||||    
T  16351498 tgacttgactcccctccatctgatctactctccttactacatgatccaaaagttttctctctacatgcctaaaccacccaagtctagtttctac 16351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 7531706 - 7531845
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||| ||||  |||||||||||| ||| |||||||||    
T  7531706 agtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctag 7531805  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac 169  Q
    |||| |||||||  |||||||||||| |||||||| ||||    
T  7531806 tgatctgactcccctccatctgatctactctccttactac 7531845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 71 - 257
Target Start/End: Complemental strand, 25985697 - 25985511
Alignment:
Q  71 ttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac- 169  Q
    ||||| |||||||||||||||||| | | ||  ||||||||||||||| ||||||||||||||||||||||  | ||||||||||  ||||||| || |     
T  25985697 ttctaaatccttcttaatagtttcccatttagtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttacttca 25985598  T
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
     ||| |||| |||||||||| ||||||||||| |||   |||||||||||||||||||||||||||| |||||| |||| || |||||    
T  25985597 aaattcacatgtcttctctc-acatgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctaccccaactctct 25985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 232
Target Start/End: Original strand, 39953334 - 39953529
Alignment:
Q  38 atcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttga 137  Q
    ||||||||||| || ||||||  ||| ||| || |||||||||||| |||||||||||||| ||  ||| |||||||| ||||||||||||||||| |||    
T  39953334 atcaaaaaccatgtttttctctaactcatttatctctagatccttcctaatagtttctcttttagttttcctaggtctacccctacctctagtgatctga 39953433  T
Q  138 ctcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttct 232  Q
     ||   | |||||||||| |||||||| ||||  |||||| |||||  ||||||||||||| ||||||| | | ||||||||||||||||||||||    
T  39953434 ttcgccttcatctgatctactctccttactacataatccataggtcacctctctacatgcctaaaccacctaaatctagtttctaccatcttttct 39953529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 10080004 - 10080174
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||||||| ||||| |||||||  || |||||||||||| ||||||||||||||||||||||  | ||| |||||| ||||||||    
T  10080004 attaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagtgatttgactccccttcatttgatctactctcctt 10080103  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
     ||||  ||||| ||||||||||||||||||||| |||||| |   | |||||||| |||||||||||||||    
T  10080104 actacaaaatcctcaggtcttctctctacatgcccaaacca-tcaggcctagtttccaccatcttttctact 10080174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 25985723 - 25985880
Alignment:
Q  91 tttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctc 189  Q
    |||||||||||  |||||||| ||| ||||||||||||| ||| |||||||  |||||||||||| |||||||| ||||  ||| |||||||||||||||    
T  25985723 tttctcttatattttttctagatctacccctacctctagcgatctgactcccttccatctgatctactctccttactacaaaattcacaggtcttctctc 25985822  T
Q  190 tacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    || ||||  ||||||  | |||||||||||||| | ||||||||||| |||||| ||||    
T  25985823 taaatgcacaaacca-ataagtctagtttctacaaacttttctactataggtgctaccc 25985880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 257
Target Start/End: Complemental strand, 45419400 - 45419229
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacaggtctt 184  Q
    |||||||||||||||||  ||||||||||||||| ||||||||   ||| ||||||   |||||||||||| |||| | | ||| |  || |||||||||    
T  45419400 taatagtttctcttatagtttttctaggtcttcctctacctcttcagatctgactctcctccatctgatctactcttcatacta-gcctctacaggtctt 45419302  T
Q  185 ctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
     |||||||||||| ||||||| | |||||| ||| ||||||||||||||||| |||||| |||| || |||||    
T  45419301 atctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctaccccaattctct 45419229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 3079711 - 3079840
Alignment:
Q  75 agatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatc 174  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||| |||||  | |||||||||| || |||||   || ||      
T  3079711 agatctttcttaatagtttctcttata-gttatctaggtcttcctttacctctagtgatttcactccccttcatctgatctactttccttatcacaaaat 3079809  T
Q  175 cacaggtcttctctctacatgccaaaaccac 205  Q
    || |||||||||||||||||||| |||||||    
T  3079810 cataggtcttctctctacatgccgaaaccac 3079840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 16917368 - 16917198
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| | ||| |||||||| | ||||  ||||||||||||||  |||||| |||||||||||||    || ||||||||| ||||||||    
T  16917368 attaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtagtgatttgactatcctcaatctgatctactctcctt 16917269  T
Q  165 cctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
     |||| |||| ||| | ||||||| |||||||| ||||||| | || |||||||  |||||||||||||||    
T  16917268 actacaaatctacaagccttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctact 16917198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 29700438 - 29700268
Alignment:
Q  88 tagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttct 186  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||| |||||    ||||||| |||| |||||||| |||| |||||||  |||||| |    
T  29700438 tagtttctcttttagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatccaatggtctttt 29700339  T
Q  187 ctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||| ||||| ||||||| | || | | ||||  ||||||||||||||| |||||| |||| || |||||    
T  29700338 ctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctaccccaactctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 38178357 - 38178479
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| ||||| || || ||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||    |||||||||||| ||||||||    
T  38178357 attaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatctactctcctt 38178456  T
Q  165 cctac-gaatccacaggtcttct 186  Q
     ||||  |||| |||||||||||    
T  38178457 actacaaaatctacaggtcttct 38178479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 204
Target Start/End: Complemental strand, 29520834 - 29520695
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| ||| ||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||||    |||||||||||| ||||||||    
T  29520834 attaatctctaaatcgttcctaacagtttctcttatagtttttctagg-cttcctctacctcttgtgatttgactatcctccatctgatctactctcctt 29520736  T
Q  165 cctacgaa-tccacaggtcttctctctacatgccaaaacca 204  Q
     |||| || || ||| |||||||||||||||||| ||||||    
T  29520735 actacaaaatctacaagtcttctctctacatgcccaaacca 29520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 34196287 - 34196164
Alignment:
Q  119 cctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtt 217  Q
    ||||||||||||||||||||| |  |||||||||| | ||||||||  ||| |||||| ||||||||||||  ||||||| ||||||| | |||||||||    
T  34196287 cctacctctagtgatttgacttccctccatctgat-tactctccttagtacagaatccccaggtcttctct--acatgcccaaaccacataagtctagtt 34196191  T
Q  218 tctaccatcttttctactacaggtgca 244  Q
    |||||  | |||||||||| |||||||    
T  34196190 tctactgttttttctactataggtgca 34196164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 26685981 - 26686067
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtctt 116  Q
    ||||||||||||||||||| || ||||||| ||| || ||| ||||| |||| ||||| |||||||||||||  |||||||||||||    
T  26685981 agtgttctatcaaaaaccatgtctttctccaactcatcaatctctaggtcctacttaacagtttctcttatagcttttctaggtctt 26686067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 30812878 - 30812976
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctcta 128  Q
    ||||||||||||||||||| || ||| ||| ||| ||| || |||||||||||| ||| |||||||  ||||  |||||||||||| ||||||||||||    
T  30812878 agtgttctatcaaaaaccatgtctttttccaactcatttatctctagatccttcctaacagtttcttgtatagtttttctaggtctacccctacctcta 30812976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 38409130 - 38409223
Alignment:
Q  76 gatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    |||||||| |||||||||| | ||||  |||||||||||| |||||||||| |||| ||||||||   |||||||||||| |||||||| ||||    
T  38409130 gatccttcataatagtttcgcgtatagtttttctaggtctacccctacctccagtggtttgactctcctccatctgatctactctccttgctac 38409223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 45512612 - 45512776
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtct 183  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||||||||     |||||| |||| |||| ||| ||| |||||| | || |||    
T  45512612 taatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactatctgccatctaatctactctgcttactaccgaatctagagatct 45512711  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||| || ||||| ||||||  | ||  || |||| | |||||||||||||| |||||| ||||    
T  45512712 tctctttatatgcccaaaccatctaagcttattttccatcatcttttctactataggtgctaccc 45512776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 2216458 - 2216399
Alignment:
Q  80 cttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||||||| |||||    
T  2216458 cttcttaatagtttctcttatgttttttctaggtcttcctctacctctagtgatctgact 2216399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 9695710 - 9695627
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaat 253  Q
    ||||| ||||| |||||||||||||||| ||||||| | || | |||||| |||||||||||||||| |||||| |||| ||||    
T  9695710 gaatctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctaccccaaat 9695627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 16715458 - 16715363
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    |||||| ||| |||||||||| || |||||||||||||  |||||||| ||||| || || |||||||||||||| ||  ||||||||||| ||||    
T  16715458 attaatctcttgatccttcttgatggtttctcttataaactttctaggccttcctctgccactagtgatttgactactccccatctgatctactct 16715363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 24399886 - 24399960
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| || || | || |||||||| ||||||||    
T  24399886 attaatctcgagatccttcttaatagtttctcttataatttttctaagttttgctctgcctctagtaatttgact 24399960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 30748625 - 30748463
Alignment:
Q  82 tcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacagg 180  Q
    ||||||||||||||||||    ||||| ||||||||| ||   ||||||||||||||| |  |  || |||||| || | ||| |||  ||||| |||||    
T  30748625 tcttaatagtttctcttacggtttttcaaggtcttcctctgattctagtgatttgactaccctatatttgatctactttgcttactatagaatctacagg 30748526  T
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||| ||||||| | || || | ||| ||||||||||||||||| |||||    
T  30748525 tcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctactactggtgc 30748463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 35643703 - 35643777
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| ||||||||| |||||||||||  ||||||||||||||| || |||||||| || |||||    
T  35643703 attaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctctagtaatctgact 35643777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 37826459 - 37826377
Alignment:
Q  82 tcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||||||||||||||||||  || ||||||||| || || ||||||||||||||||| || | |||||||||| || |||||    
T  37826459 tcttaatagtttctcttatagtttatctaggtctccctctgcctctagtgatttgactactcttcatctgatctactttcctt 37826377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 9904979 - 9905054
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactc 140  Q
    ||||||||||| ||| || ||||||||||||||| ||  ||||||||||||||  ||||||||  |||||||||||    
T  9904979 attaatttctaaatctttattaatagtttctcttgtagtttttctaggtcttcatctacctcttttgatttgactc 9905054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 30456444 - 30456491
Alignment:
Q  199 aaaccactttagtctagtttctaccatcttttctactacaggtgcaac 246  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||    
T  30456444 aaaccacataagtctagtttctaccatcttttctactataggtgcaac 30456491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 79212 - 79138
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| |||||||||||||||||||||   |||||| | ||||| || | |||||||||||||||    
T  79212 attaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctctgcttctagtgatttgact 79138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 4011268 - 4011198
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgattt 135  Q
    |||||| | |||||| |||||||||||||||||||||  ||||||||||||||| ||  |||||| |||||    
T  4011268 attaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgattt 4011198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 43733392 - 43733330
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctct 127  Q
    |||||| |||||||||||||  |||||||||||| ||  ||||||||||||||| ||||||||    
T  43733392 attaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttcctctacctct 43733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 26638977 - 26638904
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgac 138  Q
    |||||||||| |||| |||| ||||||| | |||||||  |||||||||||| | || ||||||||||||||||    
T  26638977 attaatttctggatctttctaaatagttccccttataatatttctaggtcttactctgcctctagtgatttgac 26638904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 34196149 - 34196063
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctctg 258  Q
    |||||| ||||||||||||  ||||||| ||||||| | ||||||||||||||  | |||||||||| |||||| |||| || ||||||    
T  34196149 gaatccccaggtcttctct--acatgcccaaaccacataagtctagtttctactgttttttctactataggtgctaccccaactctctg 34196063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 36395158 - 36395231
Alignment:
Q  176 acaggtcttctctctacatgccaaaacca-ctttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||||||| |||||| ||  || ||| ||||||||| ||||||||||| |||||| ||||    
T  36395158 acaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctaccc 36395231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 5908812 - 5908704
Alignment:
Q  84 ttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtc 182  Q
    ||||||||||||||||||  |||||||||||||||  |  |||||||||| ||||     |||| ||||||| |||||||| ||||  |||| |||||||    
T  5908812 ttaatagtttctcttatagtttttctaggtcttcctatgtctctagtgatctgaccatcctccacctgatctactctccttactacaaaatctacaggtc 5908713  T
Q  183 ttctctcta 191  Q
    |||||||||    
T  5908712 ttctctcta 5908704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 12491350 - 12491414
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  12491350 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc 12491414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 32931146 - 32931042
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||||||| | ||| ||| ||||||||||||| |||  |||| |||||||||| || ||||||||||| |||||    ||||||||||||  |||||||    
T  32931146 attaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttcctctgcctctagtgatatgactatcctccatctgatctagtctcctt 32931047  T
Q  165 cctac 169  Q
     ||||    
T  32931046 actac 32931042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 43732678 - 43732563
Alignment:
Q  127 tagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccat 225  Q
    ||||||||||||| |  ||||| |||||| ||||||||  |||  |||||||| ||||||| | ||||||   ||||||| | ||||| |||||||||||    
T  43732678 tagtgatttgactgccctccatgtgatctactctcctt-ttacaaaatccacatgtcttctttttacatgtgcaaaccacctaagtcttgtttctaccat 43732580  T
Q  226 cttttctactacaggtg 242  Q
    ||||||||||| |||||    
T  43732579 cttttctactataggtg 43732563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 16994543 - 16994610
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatt 134  Q
    |||| |||| ||| |||||||||||||||| ||||  ||||||||||||||| || |||| |||||||    
T  16994543 taatctctaaatcattcttaatagtttctcatatagtttttctaggtcttcctcttcctccagtgatt 16994610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 23023410 - 23023351
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacc 124  Q
    |||||| | |||||| |||||| ||||||||||||||  ||||||||||||||| |||||    
T  23023410 attaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctctacc 23023351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 36545219 - 36545156
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||    
T  36545219 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 36545156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 38901881 - 38901952
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttata 101  Q
    |||||| |||||||||||| || ||||||| | | |||||| ||||||| |||| |||||||||| ||||||    
T  38901881 agtgttatatcaaaaaccatgtctttctccaaatcattaatctctagattcttcctaatagtttcccttata 38901952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 2776432 - 2776510
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||| || ||||||||||| ||||||| ||||||| | || | ||||||||||||| ||||||| | |||||| ||||    
T  2776432 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 2776510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 24739945 - 24740019
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||| ||| |||| ||||||||||||||||| ||||||||||| ||   | ||||| |||||||||||    
T  24739945 attaatctctacatctttctcaatagtttctcttataatttttctaggtcgtcatgtgcctctggtgatttgact 24740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 30783139 - 30783213
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| |||| |||||||||||||||   ||| |||| |||||| || ||||||||||| |||||    
T  30783139 attaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgact 30783213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 35914718 - 35914840
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtct 183  Q
    |||||||||||||||||  ||||||| ||||||| ||  |||||| ||| |||||    ||||||||| || |||||||| |||   |||| | ||||||    
T  35914718 taatagtttctcttatagtttttctatgtcttcctctgtctctagggatctgactatcctccatctgacctactctccttgctataaaatctataggtct 35914817  T
Q  184 tctctctacatgccaaaaccact 206  Q
    ||||||||| |||| ||||||||    
T  35914818 tctctctacgtgcccaaaccact 35914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 248
Target Start/End: Complemental strand, 40813502 - 40813325
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttct-aggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg 170  Q
    |||| ||||||  |||| |||||||| ||| ||||||| ||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||    
T  40813502 tctaaatcctttctaatggtttctctaata-gttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 40813404  T
Q  171 a-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
      ||| |||| ||||||||||||||||| ||||||  | |  ||| ||||||||| ||||||||||| |||||| ||||    
T  40813403 gcatctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccc 40813325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 36565457 - 36565522
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 36565522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 541433 - 541497
Alignment:
Q  37 tatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttata 101  Q
    |||||||||||| || |||||||||||| || || | ||||||| || |||||||||||| ||||    
T  541433 tatcaaaaaccatgtctttctcctacttgtttatctttagatccctcctaatagtttctcgtata 541497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 5127383 - 5127435
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||||||||||||||||||  ||||||||| || || || |||||||||||    
T  5127383 ttcttaatagtttctcttatagtttttctaggcctacctctgcctctagtgat 5127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 8879652 - 8879716
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||||||||||| || ||| ||  | |||||| ||||||||| ||||||||||| ||||||    
T  8879652 ggtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtgc 8879716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 12611613 - 12611549
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
    ||||||||||| |||| ||||||| |  ||||||| | || |||||||| |||||||||||||||    
T  12611613 aatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctact 12611549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 28269795 - 28269827
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttc 117  Q
    |||||||||||||||||| ||||||||||||||    
T  28269795 taatagtttctcttataatttttctaggtcttc 28269827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 29709861 - 29709821
Alignment:
Q  86 aatagtttctcttataagttttctaggtcttcccctacctc 126  Q
    ||||||||||||||||  ||||||||||||||| |||||||    
T  29709861 aatagtttctcttatagtttttctaggtcttcctctacctc 29709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 35362747 - 35362851
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||||||| | ||| ||| ||||||||||||  |||  ||||||||||||||| || ||| ||| |||||||||    ||||| |||||| ||||||||    
T  35362747 attaatttccaaatctttcctaatagtttctccgatagtttttctaggtcttcctctgcctatagggatttgactatcctccatttgatctactctcctt 35362846  T
Q  165 cctac 169  Q
     ||||    
T  35362847 gctac 35362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 35643814 - 35643870
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||||||||| ||||||| | ||  || |||| ||||||||||||||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctacta 35643870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 39946930 - 39946858
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||| |||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  39946930 acaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 39946858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 41971914 - 41972046
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtcttctctctacatgccaaaac 202  Q
    |||||||||| ||||  | |||||||||||||||||    |||| ||||||| |||||||| |||   |||| ||| |||||||||||||||| | ||||    
T  41971914 ttttctaggttttcctttgcctctagtgatttgactatcgtccacctgatctactctccttgctagaaaatctacacgtcttctctctacatgtccaaac 41972013  T
Q  203 cactttagtctagtttctaccatcttttctact 235  Q
    ||| | |   || |||| |||||||||||||||    
T  41972014 cacctaaacttattttccaccatcttttctact 41972046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 43904787 - 43904903
Alignment:
Q  90 gtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctct 188  Q
    ||||||||||||   ||||||||||||||  ||||||| || ||||||||    ||||||||||||  ||| ||| |||| | ||| | |||||||||||    
T  43904787 gtttctcttatagtatttctaggtcttcctgtacctcttgtaatttgactatcctccatctgatctattcttcttactacaacatctataggtcttctct 43904886  T
Q  189 ctacatgccaaaaccac 205  Q
    ||||||| | |||||||    
T  43904887 ctacatgtccaaaccac 43904903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 236
Target Start/End: Original strand, 31897490 - 31897697
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||| ||||| || ||||||| ||| ||| || |||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||    
T  31897490 agtgttctatcaacaaccatgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctag 31897589  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    |||| |||||||  ||||||| |||  |||||||  |||| |||||||||||||| ||||||||||||  |||||||   ||||||||||||||||||||    
T  31897590 tgatctgactcccctccatctaatcgactctcctaactacagaatccacaggtctgctctctacatgcgcaaaccacccaagtctagtttctaccatctt 31897689  T
Q  229 ttctacta 236  Q
    ||||||||    
T  31897690 ttctacta 31897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 10209272 - 10209042
Alignment:
Q  14 tgaatcaaaggaccccagtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggt 113  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||| ||| |||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  10209272 tgaatcaaacgacgccagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggt 10209173  T
Q  114 ct--tcccctacctctagtgatttgactcctatccatctgatctcctctccttcct-acgaatccacaggtcttctctctacatgccaaaaccactttag 210  Q
    ||   |||||||| ||||| || ||||||   |||||||||||| |||||||| || |  ||| ||||||||||||| ||||||||| ||||||  | ||    
T  10209172 ctccccccctaccactagtcatatgactctcctccatctgatctactctccttactaaaaaattcacaggtcttctcgctacatgcccaaaccaactaag 10209073  T
Q  211 tctagtttctaccatcttttctactacaggt 241  Q
    | |||||||| ||||||||||||||| ||||    
T  10209072 tttagtttctgccatcttttctactataggt 10209042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 248
Target Start/End: Complemental strand, 46372263 - 46372025
Alignment:
Q  13 atgaatcaaaggacccca--gtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttcta 110  Q
    |||||||||||||| | |  |||||||||||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||||||||  |||||||    
T  46372263 atgaatcaaaggacgctacggtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttcta 46372164  T
Q  111 ggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccacttta 209  Q
    ||||| ||||||||||||||||| || ||||  || ||||||||| |||| |||  ||| ||||||||| |||||||||||||||||  ||||||| | |    
T  46372163 ggtctacccctacctctagtgatctggctcccctctatctgatctgctcttcttagtacagaatccacatgtcttctctctacatgcacaaaccacctaa 46372064  T
Q  210 gtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||| || ||||| |||| |||||| ||||    
T  46372063 gtctagtttctacaatattttcgactataggtgctaccc 46372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 26356804 - 26356626
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  26356804 attaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctactctcctt 26356705  T
Q  165 cctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
     |||| | | ||||| ||||||||||||  |||| ||||||| | |||||| ||||||||||||||||||||| |||||    
T  26356704 actacaatacccacatgtcttctctctaagtgcccaaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 205
Target Start/End: Original strand, 31961328 - 31961504
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||| ||||| || ||||||| ||| ||| || |||||||| ||| |||||||||||||||||  |||||||||||| |||||||||||||    
T  31961328 agtgttctatcaacaaccatgtctttctccaactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtctacccctacctctag 31961427  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
    ||||||||||||| ||||||| |||  |||||||  |||| ||||||||| |||||||||||||||||| |||||||    
T  31961428 tgatttgactcctctccatctaatccactctcctaactacagaatccacaagtcttctctctacatgcccaaaccac 31961504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 34 - 236
Target Start/End: Original strand, 42285769 - 42285969
Alignment:
Q  34 ttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    ||||||||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||  ||||  |||||||||||| |||| ||||||||||||    
T  42285769 ttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttct--tatagcttttctaggtctacccccacctctagtgat 42285866  T
Q  134 ttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttct 232  Q
     |||||||  |||| ||||||| |||| ||  |||| ||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  42285867 ctgactcccctcca-ctgatctgctcttctgactacagaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttct 42285965  T
Q  233 acta 236  Q
    ||||    
T  42285966 acta 42285969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 257
Target Start/End: Original strand, 35555718 - 35555937
Alignment:
Q  36 ctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgattt 135  Q
    ||||||||||||| || ||||||| ||| ||| || ||||||    ||||||||||||||||||||  |||||||||||| ||||||||||||||||       
T  35555718 ctatcaaaaaccatgtctttctccaactcatttatctctagac---tcttaatagtttctcttatagtttttctaggtctacccctacctctagtgaccc 35555814  T
Q  136 gactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
     ||||   || |||| |||| |||||||  |||| |||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||||    
T  35555815 aactctcctctatctaatctactctcctaactacagaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctac 35555914  T
Q  235 tacaggtgcaacccaaaatctct 257  Q
    || |||||| |||| || |||||    
T  35555915 tataggtgctacccgaactctct 35555937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 17900613 - 17900481
Alignment:
Q  117 cccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctag 215  Q
    |||||||||||| |||| |||||||| |||||||||||| |||||||  ||||  |||||||||||||||||||||| |||| ||||||| | |||||||    
T  17900613 cccctacctctaatgatctgactcctctccatctgatctactctcctatctacataatccacaggtcttctctctacgtgcccaaaccacatgagtctag 17900514  T
Q  216 tttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||| |||||||||||| |||||| ||||    
T  17900513 tttctaccgtcttttctactataggtgctaccc 17900481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 54470392 - 54470199
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||| | || ||||||| ||||||||||  |||||| |||||||   | |||||||| |||||||| || ||||| |||| | ||||||||    
T  54470392 attaatctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgactactctccatttgatttactctcctt 54470293  T
Q  165 cctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
     ||||  |||  ||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| |||| || |||||    
T  54470292 actacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctaccccaactctct 54470199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 257
Target Start/End: Original strand, 42639084 - 42639310
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||||| ||||  | | | ||| ||| ||||||  ||||||| ||||||||||||||||||  |  |||||||| | |||| ||||||||||||    
T  42639084 tgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctagatattcctctacctctagtg 42639183  T
Q  132 atttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
    ||||||||||  ||||||| || | | | |||| | || ||||||| | |||||||||||||||| | ||||||| | || || ||||| ||||||||||    
T  42639184 atttgactcccctccatctaatttaccccccttaccacagaatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatctttt 42639283  T
Q  231 ctactacaggtgcaacccaaaatctct 257  Q
    |||||| ||||||||||| || |||||    
T  42639284 ctactataggtgcaaccctaactctct 42639310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 25257715 - 25257844
Alignment:
Q  102 agttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaa 200  Q
    |||||| ||||||||||||||||||||||||||||  |||  |||||||||||| |||||||| | || | || ||||||||||||||||||||||  ||    
T  25257715 agttttttaggtcttcccctacctctagtgatttgtgtcccctccatctgatctactctccttacaacagcattcacaggtcttctctctacatgctcaa 25257814  T
Q  201 accactttagtctagtttctaccatctttt 230  Q
    ||||| | ||||||| ||||||||||||||    
T  25257815 accacctaagtctagcttctaccatctttt 25257844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 236
Target Start/End: Complemental strand, 50471688 - 50471539
Alignment:
Q  88 tagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttct 186  Q
    ||||||||||||||   ||||||||| |||| | ||||||||| |||| |||||| ||||| || ||| ||||||||  ||  |||| ||||||||||||    
T  50471688 tagtttctcttatagtctttctaggttttccaccacctctagtaatttaactcctctccatatggtctactctccttaatatagaattcacaggtcttct 50471589  T
Q  187 ctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  50471588 ctctacatgcccaaaccacttaaacctagtttccaccatcttttctacta 50471539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 2589120 - 2589008
Alignment:
Q  120 ctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagttt 218  Q
    ||||||||||| |||| |||||  |||||||||||| |||||||  |||| ||||||||| || ||||||||||||||| ||||||| | ||||||||||    
T  2589120 ctacctctagtaatttaactcccctccatctgatctactctcctaactacagaatccacaagttttctctctacatgcctaaaccacctaagtctagttt 2589021  T
Q  219 ctaccatcttttc 231  Q
    |||||||||||||    
T  2589020 ctaccatcttttc 2589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 197
Target Start/End: Complemental strand, 2589292 - 2589124
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||||||||||||||||  | ||  ||| ||| |||||| ||||||||| |||| ||||||||||||||   ||||||||||| | | ||||||||||    
T  2589292 agtgttctatcaaaaaccatattttcatccaactcattaatctctagatccatcttgatagtttctcttatgctttttctaggtcgtgctctacctctag 2589193  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgcc 197  Q
    | |||| |||||  ||||| |||||| |||||||  |||| ||||||||| || |||||||||||||||    
T  2589192 taatttaactcccctccatttgatctactctcctaactacagaatccacaagttttctctctacatgcc 2589124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 51550352 - 51550502
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cg 170  Q
    |||||||||||| ||||||  ||||||||   ||||| |||||| ||||||||| ||||||| |||||||  |||||||||||  |||||||| |||  |    
T  51550352 tctagatccttcctaatagcatctcttatggtttttccaggtctacccctacctttagtgatctgactcccctccatctgatcaactctccttgctagag 51550451  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttcta 221  Q
    ||||||||  ||||||||||||||||| ||||||| | |||||||| ||||    
T  51550452 aatccacatatcttctctctacatgcccaaaccacctaagtctagtctcta 51550502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 33710109 - 33709931
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| ||||||||  ||||||||||||||| |||   |||| || |  |||||||  |||||||||| ||||| |  ||| |||||||  ||||| ||    
T  33710109 attaatctctagatcagtcttaatagtttctcgtatggtttttataagcattcccctgtctctagtgatctgactaccctccttctgatccactctcttt 33710010  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
     |||| |||||||||| ||||||||| ||||||| ||||||| | |  |||||||| |||||||||||||||| |||||    
T  33710009 actacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtg 33709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 6478745 - 6478878
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||| |||||||||||| || ||||||  ||| ||| |  |||||||||||| |||||||||||||| |   |||||||||||| |||||| |||| |    
T  6478745 agtgttgtatcaaaaaccatgtctttctctaactcatttacctctagatccttcctaatagtttctcttgtcgtttttctaggtctacccctagctctgg 6478844  T
Q  130 tgatttgactcctatccatctgatctcctctcct 163  Q
    |||| | |||||  |||||||||||| |||||||    
T  6478845 tgatctaactcccttccatctgatctactctcct 6478878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 197
Target Start/End: Complemental strand, 37488280 - 37488143
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||||| || || ||| | ||||| ||||    || |||||||||| ||||    
T  37488280 acttattaatttctagatctttcttaatagtttctcttatagtttttctaggtctacctctgcctatggtgatctgacaatcatgcatctgatctactct 37488181  T
Q  161 ccttcctacga-atccacaggtcttctctctacatgcc 197  Q
    || | |||| | ||| || |||||||| ||||||||||    
T  37488180 ccctactacaacatctaccggtcttctatctacatgcc 37488143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 242
Target Start/End: Complemental strand, 44360306 - 44360094
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||  || ||||||| ||| |||    || ||||||||||| | ||||||||| |||  ||||||| |||||| ||   | ||||    
T  44360306 agtgttctatcaaaaaccgtgtctttctccaactcattggcctcaagatccttcttgacagtttctctaatagtttttctaagtcttctccaggcactag 44360207  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    ||||||| ||||  ||||| ||||||  | ||||| ||||    |||||| |||||||||||||||||| |||| || | | ||||||||||||||||||    
T  44360206 tgatttgcctcccctccatatgatctattatccttactacatcgtccacatgtcttctctctacatgcccaaacaacctaa-tctagtttctaccatctt 44360108  T
Q  229 ttctactacaggtg 242  Q
    |||||||| |||||    
T  44360107 ttctactataggtg 44360094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 47147558 - 47147441
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||||||||||||||  ||||  ||||||||||||||| || |||||||||||  |||| || |||||||||| | ||||||||    
T  47147558 attaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctctagtgatccgactactctccatctgatttactctcctt 47147459  T
Q  165 cctac-gaatccacaggt 181  Q
     ||||  |||||||||||    
T  47147458 actacataatccacaggt 47147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 10775530 - 10775642
Alignment:
Q  29 cagtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctcta 128  Q
    |||||||||||||||||||| || ||||||| ||| |||  |||||||||||||||| || |||||||| |||  | || |||||||||| ||| || ||    
T  10775530 cagtgttctatcaaaaaccatgtctttctccaactcattgttttctagatccttcttgatggtttctctaatagttcttttaggtcttcctctatcttta 10775629  T
Q  129 gtgatttgactcc 141  Q
    || ||||||||||    
T  10775630 gttatttgactcc 10775642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 51252664 - 51252751
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||||| |||||||||||||||||| | ||||| | || |||||||| |||||||||||||||| |||||| |||| || |||||    
T  51252664 gaatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctaccccaactctct 51252751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 44667343 - 44667445
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttc 165  Q
    ||||| |||||||  ||||| |||||||||  ||||  ||||| ||||||||  || ||||||||||||||||| |||| |||||||||| |||||||||    
T  44667343 ttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcctctagtgatttgactactatacatctgatctactctccttc 44667442  T
Q  166 cta 168  Q
    |||    
T  44667443 cta 44667445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 1427400 - 1427553
Alignment:
Q  84 ttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtc 182  Q
    |||| ||||||| |||||  |||| ||| |||||||||||||||||||||||||||||      | |||||| |||||||| | ||  ||||||||||||    
T  1427400 ttaagagtttcttttatagtttttatagatcttcccctacctctagtgatttgactcccccttgtatgatctactctccttaccacaaaatccacaggtc 1427499  T
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
     |||||||||||||  ||||||  | || |||||||| ||||| ||||||||||    
T  1427500 ctctctctacatgctcaaaccatctaagcctagtttccaccatgttttctacta 1427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 28351742 - 28351617
Alignment:
Q  67 taatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcc 166  Q
    |||| |||| ||| ||| |||||||||||||||||  ||||||||||||| | |||||||| || || |||||    |||||||||||| |||||||| |    
T  28351742 taatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgatctactctccttac 28351643  T
Q  167 tac-gaatccacaggtcttctctcta 191  Q
    ||| || || ||||||||||||||||    
T  28351642 tacagagtctacaggtcttctctcta 28351617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 31959918 - 31960095
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  ||||||||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||     
T  31959918 tctaaatcctttctaatagtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgg 31960017  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  31960018 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 31960095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 29398964 - 29398824
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 202  Q
    ||||||||||||||| || |||||||||||||||||    || ||| | ||| |||||||  |||| ||||| | |||||||||||||||||||| ||||    
T  29398964 ttttctaggtcttcctctgcctctagtgatttgactatcctctatccggtctactctcctcactacagaatctataggtcttctctctacatgcccaaac 29398865  T
Q  203 cactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||| | ||  || |||| |||||||||||||| | ||||||    
T  29398864 cacataagcatattttccaccatcttttctaccataggtgc 29398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 46715548 - 46715648
Alignment:
Q  144 tccatctgatctcctctccttcctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||| |||||| |||||||| ||||  |||||||| |||||||||||||||||| | ||||| | || |||||||| |||||||||||||| | |||||    
T  46715548 tccatatgatctactctccttgctacataatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtg 46715647  T
Q  243 c 243  Q
    |    
T  46715648 c 46715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 227
Target Start/End: Complemental strand, 47372836 - 47372673
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttct-aggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcct 163  Q
    |||||| ||| |||| || ||| |||||||||||||| ||||||| | |||| || || ||||||||||||||||| |  ||| ||| |||| |||| ||    
T  47372836 attaatctctggatctttattagtagtttctcttata-gttttctcaagtctacctctgcctctagtgatttgactaccctccgtctaatctactcttct 47372738  T
Q  164 tcctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatct 227  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||    ||||||||||| |||||||    
T  47372737 tcctacaaaatccacgggtcttcgctctacatgcctaaaccatcgaagtctagtttccaccatct 47372673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 41192915 - 41192828
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||| |||||||||||||||||||||  ||| ||| | ||||||||||| |||||||||||||||  |||||| |||| || |||||    
T  41192915 gaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaactctct 41192828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 49738647 - 49738731
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgat 153  Q
    ||||||||||||||||||||||||||||| | |||||  |||||||||||||    | |||||||||||||||||| | || |||||||    
T  49738647 attaatttctagatccttcttaatagtttttattatagtttttctaggtctt----tgcctctagtgatttgactcatctctatctgat 49738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 50680925 - 50680746
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||| |||| |||||||||||  |||||||||||| || || ||| ||||||| | |||    | |||  ||||| ||||||||    
T  50680925 attaatctctagatctttctaaataatttctcttatagtttttctaggtctacctctgcctatagtgatctaactatccttcattggatctactctcctt 50680826  T
Q  165 cctacg-aatccacaggtcttctctctacatgcca-aaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
     ||||| |||| ||| | ||||||||||||||||| ||||||| | || ||| |||| ||||||||||| |||| |||||    
T  50680825 actacggaatctacaagccttctctctacatgccataaaccacctaagcctattttccaccatcttttcaactataggtg 50680746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 42293362 - 42293436
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    ||||||||||||||| |||||||||||||||||||||  |||| ||| || |||  | |||||||||||||||||    
T  42293362 attaatttctagatctttcttaatagtttctcttatagtttttttagttcatcctttgcctctagtgatttgact 42293436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 44686668 - 44686770
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttc 165  Q
    ||||| |||||||  ||||| |||||||||  ||||  ||||| ||||||||  || ||||||||||||| ||| |||| |||||||||| |||||||||    
T  44686668 ttaatctctagatttttcttgatagtttctaatatagtttttcgaggtcttcttctgcctctagtgatttaactactatacatctgatctactctccttc 44686767  T
Q  166 cta 168  Q
    |||    
T  44686768 cta 44686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 45569113 - 45569175
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatt 134  Q
    |||||||  ||||||||||||||||||||||  |||||||||||||| || ||||||||||||    
T  45569113 tctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgatt 45569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 49987577 - 49987519
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||||||||||||||||  ||||||||||||||| || |||||||||| ||||||    
T  49987577 ttcttaatagtttctcttatagtttttctaggtcttcctctgcctctagtgaattgact 49987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 11389870 - 11389805
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    ||||||| ||||||| |||||||||||||||||||| || ||||||| |||| |||||||| ||||    
T  11389870 ttttctacgtcttcctctacctctagtgatttgactactttccatcttatctactctccttactac 11389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 241
Target Start/End: Complemental strand, 47611892 - 47611735
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccac-aggtct 183  Q
    ||||||||||  |||||| ||||||||||||||| || ||||||  | | ||||||   |||||||||| | ||||||||  ||| ||  | | ||||||    
T  47611892 taatagtttcaattataatttttctaggtcttcctctgcctctaagggtctgactctcctccatctgatttactctccttattacaaaatctctaggtct 47611793  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    |||||||||||||| ||||||| | || ||| |||| | ||||||||||||| |||||    
T  47611792 tctctctacatgcccaaaccacctaagcctattttccatcatcttttctactccaggt 47611735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 53518459 - 53518558
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 202  Q
    ||||||||| ||||| ||||||||  |||||||||||   |||||||||||| |||| | | |||| | ||||||||||||||||||||||| || ||||    
T  53518459 ttttctaggccttcctctacctcttctgatttgactc---tccatctgatctactcttcgtactacagcatccacaggtcttctctctacatacccaaac 53518555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 436389 - 436230
Alignment:
Q  90 gtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctct 188  Q
    |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||  ||| |||||||||||||    
T  436389 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacaggtcttctct 436290  T
Q  189 ctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||| ||| ||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  436289 ctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccc 436230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 28497595 - 28497482
Alignment:
Q  144 tccatctgatctcctctccttcctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||| |||||||| ||||  |||| ||| |||||||||||||||||| ||||||| | || ||  |||| || ||||||||||||| |||||    
T  28497595 tccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtg 28497497  T
Q  243 caacccaaaatctct 257  Q
    | |||| || |||||    
T  28497496 ctaccccaactctct 28497482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 31459098 - 31459036
Alignment:
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||| |||||||| ||||||| | || ||| ||||||||||||||||||||| ||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgc 31459036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 2557779 - 2557832
Alignment:
Q  75 agatccttcttaatagtttctcttataagttttctaggtcttcccctacctcta 128  Q
    ||||||||||||||||||||||||| |  |||||||| |||||| |||||||||    
T  2557779 agatccttcttaatagtttctcttacagtttttctagatcttcctctacctcta 2557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 13805378 - 13805503
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacag 179  Q
    ||||| |||||||||||||||  |||||||||| |||| || ||||||||||| ||||     ||||| ||||||  ||||||| ||||  |||| | ||    
T  13805378 ttcttcatagtttctcttatagtttttctaggttttcctctgcctctagtgatctgacaatcctccatgtgatctagtctccttgctacaaaatctaaag 13805477  T
Q  180 gtcttctctctacatgccaaaaccac 205  Q
    ||||||||||||||| || |||||||    
T  13805478 gtcttctctctacatacccaaaccac 13805503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 27450391 - 27450460
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| ||||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  27450391 ggtcttctctctacatgtcaaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 27450460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 33191060 - 33191129
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| |||| |  | |||||| ||||||||| ||||||||||| |||||| ||||    
T  33191060 ggtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctaccc 33191129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 33225931 - 33225984
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttccc 119  Q
    ||||| |||| ||| |||||||||||||||||||||| ||||||||||| ||||    
T  33225931 ttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatccc 33225984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 36557246 - 36557298
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||| || ||||||||  ||||||||||||||||||||||||||||    
T  36557246 ttctctctacattcccaaaccacta-agtctagtttctaccatcttttctacta 36557298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 43433994 - 43433925
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  43433994 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 43433925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 50662467 - 50662394
Alignment:
Q  170 gaatccacaggtcttctctctacatgcc-aaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||| ||| |||||||||||||||||| |||||||| | || ||| |||| |||||||||||||||| |||||    
T  50662467 gaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 52569727 - 52569796
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  52569727 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 52569796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 4441031 - 4440859
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | || |    
T  4441031 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacag 4440932  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
     ||| || ||||||||||||| ||||| ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  4440931 catctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc 4440859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 8459133 - 8459273
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttc 165  Q
    ||||| |||||||  ||||||||||||| |||| ||  |||| |||||||||| || ||| ||||||||||||| ||   ||| | |||| ||||||||     
T  8459133 ttaatctctagatttttcttaatagtttatcttttagtttttttaggtcttcctctgcctttagtgatttgactactcctcatgtaatctactctcctta 8459232  T
Q  166 ctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
     ||| ||||| ||| |||||||||||| ||| | |||||||    
T  8459233 ttacagaatctacatgtcttctctctatatgtccaaaccac 8459273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 18966781 - 18966721
Alignment:
Q  74 tagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatt 134  Q
    |||||| |||||||||||||||||||||  | || |||||||||  |||||||||||||||    
T  18966781 tagatctttcttaatagtttctcttatagttgttttaggtcttcttctacctctagtgatt 18966721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 21945735 - 21945839
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||||||| | ||| ||| ||||||||||| | |||  ||||||||||||||| |  ||||||||||| |||||    |||||||||||| ||||||||    
T  21945735 attaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctctagtgatgtgactatcctccatctgatctactctcctt 21945834  T
Q  165 cctac 169  Q
     ||||    
T  21945835 actac 21945839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 45423681 - 45423621
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||| |||||||| ||||||||| | |||| |||||||||||||||||||| || ||||||    
T  45423681 ttctttctacatgtcaaaaccacgtaagtcaagtttctaccatcttttctattataggtgc 45423621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 53707864 - 53707800
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  53707864 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc 53707800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 7682023 - 7682106
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||| |||||||||||||||  ||||| ||||||||| || ||||||||||| ||||| |  ||||||| |||| || |||||    
T  7682023 ttcttgatagtttctcttatagtttttccaggtcttcctctgcctctagtgatgtgactaccctccatctaatctactttcctt 7682106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 8599047 - 8599090
Alignment:
Q  74 tagatccttcttaatagtttctcttataagttttctaggtcttc 117  Q
    |||||| |||||||||||||||||||||  ||||||||||||||    
T  8599047 tagatctttcttaatagtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 234
Target Start/End: Complemental strand, 31339681 - 31339552
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 202  Q
    ||||||||||||||| || |||||||||| |||||| || | ||| |||||| || ||||| ||||  |||| ||| |||||||||||||||||  ||||    
T  31339681 ttttctaggtcttcctctgcctctagtga-ttgactactcttcatttgatctactatccttactacataatctacaagtcttctctctacatgctcaaac 31339583  T
Q  203 cactttagtctagtttctaccatcttttctac 234  Q
    ||| | ||  ||||||| ||||| ||||||||    
T  31339582 cacctaagcttagtttcgaccat-ttttctac 31339552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 44047551 - 44047638
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||| |||||||||  ||||||||| | ||||||| | || |||| |||||||| ||||||||||| |||||| |||| || |||||    
T  44047551 gaatctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaactctct 44047638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 48033270 - 48033200
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttct-aggtcttcccctacctctagtgattt 135  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||||| | ||||||| || |||||||||||||    
T  48033270 attaatttccagatatttcttaatagtttctcttata-gttttcttaagtcttcctctgcctctagtgattt 48033200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 53540508 - 53540401
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||| ||||||  | ||| ||| ||| |||||| || |  || ||| ||||||||| |||||||  ||||||||||||||| || |||||||||    
T  53540508 tgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttcctctgcctctagtg 53540409  T
Q  132 atttgact 139  Q
    || |||||    
T  53540408 atctgact 53540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 1793624 - 1793461
Alignment:
Q  84 ttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtc 182  Q
    ||||| ||||||||||||  ||||| ||||||| | ||||||||  ||||  ||||||  |||||||||||| || | ||| | |||| ||| ||| |||    
T  1793624 ttaatggtttctcttatagtttttcgaggtctttctctacctcttttgatacgactcc--tccatctgatctactattcttacgacgacatcaacaagtc 1793527  T
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||| | ||||||  | ||  || ||||||||| ||||| ||||| |||||| ||||    
T  1793526 ttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctaccc 1793461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 35690436 - 35690394
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctct 127  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  35690436 taatagtttctcttatagtttttctaggtcttcctctacctct 35690394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 38903831 - 38903888
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||||||||||||||| ||||||||||||||||  || |||||||  ||||||||    
T  38903831 ttcttaatagtttctcttat-agttttctaggtcttcatctgcctctagccatttgact 38903888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 45204932 - 45204998
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctct 127  Q
    |||||||||  |||| ||| ||| |||||||||||||||||  ||||||||||||||| | ||||||    
T  45204932 acttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttcctccacctct 45204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 50287032 - 50286970
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    ||||||||||||||||||| ||||||    |||||| ||||||||| ||||||||||| ||||    
T  50287032 ggtcttctctctacatgcccaaaccatccaagtctattttctaccaacttttctactataggt 50286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 33227279 - 33227210
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| |||| |  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  33227279 ggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctaccc 33227210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 39754461 - 39754542
Alignment:
Q  35 tctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtctt 116  Q
    ||||||||||| || || ||||| | |||||||||| | ||  |||||||||||| ||||| |||||| ||||||| |||||    
T  39754461 tctatcaaaaatcatgtatttcttcaacttattaatctttaattccttcttaataatttcttttataatttttctaagtctt 39754542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 44719470 - 44719531
Alignment:
Q  74 tagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgattt 135  Q
    |||||| ||||||||||||||| |||||  ||||||||||||||| |  |||||| ||||||    
T  44719470 tagatctttcttaatagtttcttttatattttttctaggtcttcctcagcctctaatgattt 44719531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 48622755 - 48622812
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| |||||||||||    
T  48622755 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctacta 48622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 51841298 - 51841331
Alignment:
Q  68 aatttctagatccttcttaatagtttctcttata 101  Q
    |||||||| |||||||||||||||||||||||||    
T  51841298 aatttctaaatccttcttaatagtttctcttata 51841331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 55028977 - 55028869
Alignment:
Q  89 agtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctc 187  Q
    |||||||||||||  |||||||  ||||||  | ||||||||||||||||| | || ||||| |||| |||| ||| |||| ||||||| | ||||||||    
T  55028977 agtttctcttatagtttttctaactcttcctatgcctctagtgatttgactaccatgcatcttatctactcttcttactacagaatccata-gtcttctc 55028879  T
Q  188 tctacatgcc 197  Q
    | ||||||||    
T  55028878 tgtacatgcc 55028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 10775665 - 10775697
Alignment:
Q  210 gtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||||||||||||||| |||||    
T  10775665 gtctagtttctaccatcttttctactataggtg 10775697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 28236252 - 28236184
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||| ||||||  | || ||| |||| |||| ||||||||||| |||||| ||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctaccc 28236184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 40933052 - 40933153
Alignment:
Q  103 gttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaa 201  Q
    |||||||||||||||| || ||||| ||||||||||| |  |||||||||||| ||||| || || | ||||| | ||||||| |||||| ||| | |||    
T  40933052 gttttctaggtcttcctctgcctctggtgatttgactac--tccatctgatctactctctttactgcagaatctataggtcttttctctaaatgtccaaa 40933149  T
Q  202 ccac 205  Q
    ||||    
T  40933150 ccac 40933153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 42566413 - 42566349
Alignment:
Q  76 gatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactc 140  Q
    |||| |||||||||||||||||| ||  |||| ||||| |||| | |||||||||||| ||||||    
T  42566413 gatctttcttaatagtttctcttgtagtttttttaggtattcctcaacctctagtgatatgactc 42566349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 33 - 257
Target Start/End: Original strand, 36514273 - 36514497
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||||||||||||||| || ||||||| | | ||| || |||||||||||||| |||| |||||||||   ||||||| |||| ||||||||||||||||    
T  36514273 gttctatcaaaaaccatgtctttctccaattcatttatctctagatccttcttgatagcttctcttatgttttttctatgtct-cccctacctctagtga 36514371  T
Q  133 tttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttc 231  Q
     ||||||||  || ||||||||| |||||| | |||| ||||||||| ||| |||||||||||||| ||||||| | |||||||||||||||||||||||    
T  36514372 cttgactcccctctatctgatctactctccatactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttc 36514471  T
Q  232 tactacaggtgcaacccaaaatctct 257  Q
    ||||| |||||| |||| || |||||    
T  36514472 tactataggtgctaccccaactctct 36514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 5336130 - 5335912
Alignment:
Q  38 atcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttga 137  Q
    ||||||||||| || ||||||| ||| |||||| |||||||| ||||||||||| ||||  |||  ||||| |||| |||||||||||| ||||||||||    
T  5336130 atcaaaaaccatgtctttctccaactcattaatctctagatcattcttaatagtatctc--atagtttttcaaggttttcccctacctcgagtgatttga 5336033  T
Q  138 ctcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||  ||||||| |||| |||||||  |||| |||||||||| ||||||||||| ||||| ||||||| | ||||||||||| ||||||||| ||||||    
T  5336032 ctcccctccatctaatctactctcctaactacagaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctacta 5335933  T
Q  237 caggtgcaacccaaaatctct 257  Q
     || ||| |||| || |||||    
T  5335932 tagatgctaccccaactctct 5335912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 14593930 - 14593772
Alignment:
Q  80 cttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccaca 178  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| || ||||||||| || |      ||| |||||||||    
T  14593930 cttcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccaca 14593836  T
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||| ||||||||| ||| ||| | ||||||||||||||||| |||||||||| |||||    
T  14593835 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 16013453 - 16013295
Alignment:
Q  80 cttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacag 179  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| || ||||||||| || |  | | |   |||||||||    
T  16013453 cttcttaatagtttctcttatagtttttctaggtcttcccctacctctggtgatttgactcctctctatctgatctactat-atacat---aatccacag 16013358  T
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||| ||||||||| ||| ||| | ||||||||||||||||| |||| ||||| |||||    
T  16013357 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttgtactataggtg 16013295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 19262589 - 19262723
Alignment:
Q  123 cctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctac 222  Q
    ||||||||||||||||| |  |||||||||||| |||| ||| |||| |||| |||||||||||||||||||||  ||||||| | || | |||||||||    
T  19262589 cctctagtgatttgactacactccatctgatctactcttcttactacaaatctacaggtcttctctctacatgctcaaaccacctaagccaagtttctac 19262688  T
Q  223 catcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||||| | |||||| |||| || |||||    
T  19262689 catcttttctacaataggtgctaccccaactctct 19262723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 18605247 - 18605427
Alignment:
Q  69 atttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta 168  Q
    ||||||| ||||||| |||||||||||||| ||  |||||||||||| ||| ||| ||||||||||||||||   || |||||||||  ||||||  |||    
T  18605247 atttctaaatccttcataatagtttctcttgtagtttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaacta 18605346  T
Q  169 -cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
       |||| ||| |||||||||||||||||  ||||||| | ||| |||||||||||||||||| || || |||||| ||||    
T  18605347 tataatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18605427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 18637743 - 18637563
Alignment:
Q  69 atttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta 168  Q
    ||||||| ||||||| |||||||||||||| ||  |||||||||||| ||| ||| ||||||||||||||||   || |||||||||  ||||||  |||    
T  18637743 atttctaaatccttcataatagtttctcttgtattttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaacta 18637644  T
Q  169 -cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
       |||| ||| |||||||||||||||||  ||||||| | ||| |||||||||||||||||| || || |||||| ||||    
T  18637643 tataatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 18651177 - 18650997
Alignment:
Q  69 atttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta 168  Q
    ||||||| ||||||| |||||||||||||| ||  |||||||||||| ||| ||| ||||||||||||||||   || |||||||||  ||||||  |||    
T  18651177 atttctaaatccttcataatagtttctcttgtattttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaacta 18651078  T
Q  169 -cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
       |||| ||| |||||||||||||||||  ||||||| | ||| |||||||||||||||||| || || |||||| ||||    
T  18651077 tataatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18650997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 28628030 - 28628201
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| ||| |||||||||||||||||  ||||||||||||||| |||||||| |||||||||||    |||||| ||||| ||||||||    
T  28628030 attaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctcctt 28628129  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
     ||||  |||| |||||| |||||| |||||||| ||||||| | || | | |||| |||||| ||||||||    
T  28628130 actacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctact 28628201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 257
Target Start/End: Original strand, 48736025 - 48736189
Alignment:
Q  93 tctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg-aatccacaggtcttctctcta 191  Q
    |||||||||  ||||| ||||||  |||||||||||||||| |||||||  ||||| |||||| |||||||  ||||  ||||||||||||||| |||||    
T  48736025 tctcttatagtttttcaaggtctagccctacctctagtgatctgactccc-tccatttgatctactctcctaactacataatccacaggtcttcgctcta 48736123  T
Q  192 catgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||   ||||||| | |||||||||||| ||||||||||||||  |||||| |||| || |||||    
T  48736124 catgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgctaccccaactctct 48736189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 19119486 - 19119608
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||| |||||||| ||| || ||||||  ||| ||| || ||||||||| |||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  19119486 agtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccatcttgatagtttctctaata-gttttctaggtcttccactacctctag 19119584  T
Q  130 tgatttgactcctatccatctgat 153  Q
    |||||||||||   ||||||||||    
T  19119585 tgatttgactctcctccatctgat 19119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 40830387 - 40830317
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgattt 135  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||  ||||||||||||    
T  40830387 attaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgattt 40830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 12966185 - 12966028
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacag 179  Q
    |||||||||||||||||||||  |||||||||||||||      |||||||||||||||  | | ||  |||||| |||||||| |||| ||||  || |    
T  12966185 ttcttaatagtttctcttatagtttttctaggtcttcc------tctagtgatttgactagtcttcacttgatctactctccttactacagaatttacgg 12966092  T
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||||||||||||| ||||||| | ||  ||||||| |||||||||||| ||| ||||||    
T  12966091 gtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgc 12966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 34745964 - 34745864
Alignment:
Q  33 gttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtga 132  Q
    |||||||||||||||| || ||||||| ||| ||| || | |||||||||| ||||||||||||||||   |||||||||||| |||||| |||||||||    
T  34745964 gttctatcaaaaaccatgtttttctccaactcatttatctttagatccttcctaatagtttctcttatggtttttctaggtctacccctaactctagtga 34745865  T
Q  133 t 133  Q
    |    
T  34745864 t 34745864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 257
Target Start/End: Complemental strand, 36136928 - 36136756
Alignment:
Q  86 aatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtctt 184  Q
    ||||||||||||||||  ||||||||||||||| |||| |||  |||| ||||||   |||||||||||| |||| | | |||| | ||| | |||| ||    
T  36136928 aatagtttctcttatagtttttctaggtcttcctctacttcttctgatctgactctcctccatctgatctgctcttcgtactacaacatctataggtatt 36136829  T
Q  185 ctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||| ||||| |||| || | || ||| ||||||||||||||||||||| |||||| |||| || |||||    
T  36136828 ctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctaccccaactctct 36136756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 257
Target Start/End: Complemental strand, 47848838 - 47848666
Alignment:
Q  86 aatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtctt 184  Q
    ||||||||||||||||  |||||||| |||||| || |||||||||||  ||||    |||||||||||| ||||||||  ||| ||||  ||| |||||    
T  47848838 aatagtttctcttatagtttttctagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtctt 47848739  T
Q  185 ctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||| ||||||| ||||||| | || ||| |||| |||||||||||||||| ||| || |||| || |||||    
T  47848738 ctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactctct 47848666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 6420605 - 6420747
Alignment:
Q  83 cttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggt 181  Q
    ||||||||| |||||||||  |||| ||||||| || || ||||||||||| |||||   || |||||||||| |||||||| |||| | ||| ||| ||    
T  6420605 cttaatagtatctcttatagtttttataggtctacctctgcctctagtgatctgactatcattcatctgatctactctccttactacagtatctacaagt 6420704  T
Q  182 cttctctctacatgccaaaaccactttagtctagtttctacca 224  Q
    |||||||||||||||| ||||||| | || |||||||| ||||    
T  6420705 cttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 229
Target Start/End: Original strand, 24549785 - 24549955
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcct- 163  Q
    |||||| |||||||| |||||||||||||||||||||  | ||  ||||||||  |||||||||||||||||| |||  |||||||||  | |||||||     
T  24549785 attaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgatttgaatcccctccatctgacttactctcctt 24549884  T
Q  164 --tcctacgaa---tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttt 229  Q
      |||||  ||   ||||| ||||||||||||||||||| ||||||| | || |||||||| | |||||||    
T  24549885 agtcctaacaatagtccacgggtcttctctctacatgcccaaaccacctaagcctagtttccatcatcttt 24549955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 45558468 - 45558369
Alignment:
Q  144 tccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||| |||||||  |||| |||||||||||| |||||||||| |||  ||||||| | |||| ||||||||||| ||||||||||| |||||    
T  45558468 tccatctgatctactctcctaactacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggtg 45558369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 41483671 - 41483506
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttc 165  Q
    |||||||||||||| ||||||||||||||||||     |||||||||||||||||| || || |||||||| || |  || || |||||| ||||| ||     
T  41483671 ttaatttctagatctttcttaatagtttctcttcc---ttttctaggtcttcccctgcccctggtgatttggctaccctcaatatgatctactctcttta 41483575  T
Q  166 ctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
     |||| ||| | ||||| | |||||||||||| ||||||||| || | |||||| | ||| ||||||||    
T  41483574 gtacggatctaaaggtcatttctctacatgcccaaaccacttaagccgagtttccatcattttttctac 41483506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 41948594 - 41948532
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||||| |||||||||||||    
T  41948594 aatccagaggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 257
Target Start/End: Complemental strand, 43282576 - 43282400
Alignment:
Q  83 cttaatagtttctcttataagttttctaggtcttcccctac--ctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacag 179  Q
    |||||||||||||||||||  ||||||||||| ||| ||||  |||| ||||| |||||    ||||||| |||| ||||||||||||| |||||  ||     
T  43282576 cttaatagtttctcttatagtttttctaggtcatcctctacacctcttgtgatctgactatcctccatct-atctactctccttcctacagaatctgcaa 43282478  T
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||||||||||| ||  ||| | || |||||||| |||  ||||||||||| |||||| |||| || |||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactctct 43282400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 248
Target Start/End: Complemental strand, 28858234 - 28858045
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctg-atctcctc 159  Q
    |||||||||| |||||||| ||||||||||||| |||||||  ||||||| ||||| |  |  || ||||||||||||     |||||||| |||| |||    
T  28858234 acttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtcttactttgtctatagtgatttgacaatgctccatctgaatctactc 28858135  T
Q  160 tccttccta-cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    | ||| |||  ||||||||||||| ||| |||||||||| ||||||| | | |  |||||||||||| |||||||| | |||||| ||||    
T  28858134 ttcttactatagaatccacaggtcatctttctacatgcccaaaccacctaacttgagtttctaccatgttttctacaataggtgccaccc 28858045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 38920859 - 38920795
Alignment:
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||| ||||||||| || |||||||| |||||||||||||||| |||||| ||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctaccc 38920795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 45601661 - 45601597
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||| |||||||| |||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  45601661 attaatctctagatctttcttaatggtttctcttatagtttttctaggtcttcctctacctctag 45601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 1740948 - 1740793
Alignment:
Q  104 ttttctagg-tcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaa 201  Q
    ||||||||| |||||| ||  |||||||||||||||| |  |||||||||||| |||||||| ||||  ||||||||  ||| || ||||||| || |||    
T  1740948 ttttctaggatcttcctctggctctagtgatttgactaccctccatctgatctactctccttactacaaaatccacaattctcctatctacatacccaaa 1740849  T
Q  202 ccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||| | || |||||||| ||||| |||||||||  || ||| ||||||| |||||    
T  1740848 ccacctaagcctagtttccaccatattttctactgtagatgctacccaaactctct 1740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 30814775 - 30814842
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||| |||||||||||||||||||||   |||||||||||||| || ||||||||||| |||||    
T  30814775 tctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgact 30814842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 38135310 - 38135476
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||| ||| || ||||||||||||||||||  ||||||||||||||  || |||||| |||| |||||    ||||||||||||  |||||||    
T  38135310 attaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactatcctccatctgatct-atctcctt 38135408  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttc 231  Q
     ||||  |||| || |||||||| |||||||| | ||||||| | || ||| |||| |||||||||||    
T  38135409 actacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 44401223 - 44401290
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    ||||| |||| ||| |||||||||||||||||||||| ||||||||||| ||| | ||||||||||||    
T  44401223 ttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatcctccacctctagtgat 44401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 1569234 - 1569069
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||| ||||||  | ||  ||| ||| |||||| |||||||| |||||||||||| ||||||||  ||||||||| || || || |||||||      
T  1569234 tgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctctagca 1569135  T
Q  132 atttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgc 196  Q
    || |||||    |||||||||||| |||||||| |||| | ||| ||| | |||||||||||||||    
T  1569134 atctgactatcctccatctgatctactctcctttctacaacatctacacgacttctctctacatgc 1569069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 13859112 - 13859289
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | || |    
T  13859112 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttacgacag 13859211  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| || ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  13859212 catctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 13859289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 33073094 - 33072953
Alignment:
Q  108 ctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccact 206  Q
    ||||||||||| ||||||||  | | ||||||| | ||||| |||||| |||| ||| | |||| ||| || ||||||||||||||||||| ||| ||      
T  33073094 ctaggtcttcctctacctcttttaacttgactcttctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaaatcatc 33072995  T
Q  207 ttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    | || ||| ||||||||| ||||||||||| |||||| ||||    
T  33072994 taagcctattttctaccaacttttctactataggtgctaccc 33072953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 22349690 - 22349626
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||||||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  22349690 ggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgc 22349626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 33349923 - 33350087
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtct 183  Q
    |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||  ||| || |||||    
T  33349923 taatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtct 33350022  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||| ||||||  | || ||| |||||| || ||||||||||| |||||||||||    
T  33350023 tctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgcaaccc 33350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 28021140 - 28020979
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||||||| |||||||  |||||| ||||| ||||| ||||||||||  | |||||||  |||| |||||  ||||||| |||| ||||||||  ||| |    
T  28021140 tctagatctttcttaaccgtttcttttata-gttttttaggtcttccttttcctctagcaatttaactccc-tccatctaatctactctccttattacag 28021043  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctac 234  Q
    || | |||  ||||||||||||||||| ||||||| | || | |||||| ||||||||||||||    
T  28021042 aacctacaaatcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctac 28020979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 28359426 - 28359343
Alignment:
Q  82 tcttaatagtttctcttataagttttctaggtcttcccctacctct-agtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||||| |||||||||||| ||||||||| ||| | |||||||| |||||||||||| |  |||||||||| | ||||||||    
T  28359426 tcttaatattttctcttataatttttctaggactttctctacctctaagtgatttgactaccctccatctgatatactctcctt 28359343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 7189442 - 7189516
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||||||||||| ||||||| | ||  || ||||||||||||||||||||| |||||| |||| || |||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaactctct 7189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 30200061 - 30200238
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| ||||||| || || | |||||  |||| || ||||||| ||  ||| |||| ||||||| || |||||||||| |  |||||||    
T  30200061 attaatctctagatctttcttaaaagatttttttatagtttttttatgtcttcctctgtctc-agtgttttgactactctccatctgatatgatctcctt 30200159  T
Q  165 cctacg-aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
     ||||  ||||   ||||||||| | |||||||||||| ||| | || |||||||| |||||||||||||||| |||||    
T  30200160 actacataatctcgaggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtg 30200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 38921154 - 38921236
Alignment:
Q  34 ttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtctt 116  Q
    ||||||||||||||| || ||||||| || | ||||  | ||||||||||||||||||| ||||| ||  |||||||||||||    
T  38921154 ttctatcaaaaaccatgtctttctccaacctgttaacctgtagatccttcttaatagttcctcttctagtttttctaggtctt 38921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 39906476 - 39906651
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||||  |||| |||||| |||| ||| | ||||    
T  39906476 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactcct--ccatttgatctactcttcttaccacga 39906573  T
Q  172 -atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
     ||| |  ||||||||||||||||||| ||| ||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  39906574 catctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccc 39906651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 47796245 - 47796347
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    ||||||||||||||| ||| ||| |||||| ||||||||||| |||||| |||||||  || || |||||||| ||||     |||||||||||| ||||    
T  47796245 acttattaatttctaaatctttcctaataggttctcttataatttttctcggtcttcatctgcccctagtgatctgacaatcctccatctgatctactct 47796344  T
Q  161 cct 163  Q
    |||    
T  47796345 cct 47796347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 12841379 - 12841551
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttct-aggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacg 170  Q
    |||| ||||||  |||| |||||||| ||| ||||||| ||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||    
T  12841379 tctaaatcctttctaatggtttctctaata-gttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 12841477  T
Q  171 a-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
      ||| || ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  12841478 gcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc 12841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 34869490 - 34869421
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  34869490 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 34869421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 40830295 - 40830222
Alignment:
Q  177 caggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
    |||||||||||||| |||||| ||||||| | |||  ||||||||||||||||||| | | |||||| ||||||    
T  40830295 caggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctacccaa 40830222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 49029346 - 49029277
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  49029346 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 49029277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 2885839 - 2886003
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtct 183  Q
    |||| ||||||||||||  ||| ||||||||||  ||||||||  |||  ||||||   |||||||||||| |||| | | | |||  ||| || | |||    
T  2885839 taatggtttctcttatagttttcctaggtcttcttctacctcttttgacctgactctcctccatctgatctactcttcgtacaacggcatctacggatct 2885938  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  2885939 tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 2886003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 27021906 - 27021982
Alignment:
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||||||||||||| ||||||| | || |||||||  |||| ||||||||||| |||||| |||| || |||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactctct 27021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 35906413 - 35906477
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  35906413 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc 35906477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 45558550 - 45558482
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctctt 98  Q
    ||||||||||||||||||| || |||| || ||| ||| || ||||||||||||  |||||||||||||    
T  45558550 agtgttctatcaaaaaccatgtctttcaccaactcatttatctctagatccttcccaatagtttctctt 45558482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||||||||||||||| ||||||| | || | |||||||| |||||||||||| | ||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 31005383 - 31005224
Alignment:
Q  90 gtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtcttctct 188  Q
    |||||||| |||  ||| ||||||||||| ||||||||  | | |||||||   ||||| |||||| |||| ||| | |||  ||| || ||||||||||    
T  31005383 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctct 31005284  T
Q  189 ctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||| ||||||  | |  ||| ||||||||| ||||||||||| |||||| ||||    
T  31005283 ctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccc 31005224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 7273112 - 7273046
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||| |||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||    
T  7273112 acaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 39812098 - 39812004
Alignment:
Q  109 taggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtcttctctctacatgccaaaac 202  Q
    |||||||||| || |||||||||||||| ||    |||||||||||| |||||||| |||  ||||| |||  ||||||||||||||||| ||||    
T  39812098 taggtcttccacttcctctagtgatttggctttcctccatctgatctactctccttactatagaatctacatctcttctctctacatgcccaaac 39812004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 44855384 - 44855446
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| ||||    
T  44855384 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggt 44855446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 6374938 - 6374869
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||  ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  6374938 ggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 6374869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 25578080 - 25578023
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaa 87  Q
    |||||| |||||||||||| || ||||||| | | |||||| ||||||||||||||||    
T  25578080 agtgttttatcaaaaaccatgtctttctccaattcattaatctctagatccttcttaa 25578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 28562464 - 28562525
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctct 127  Q
    ||||| |||| ||| ||| |||||||||||||||||  ||||||||||| ||| ||||||||    
T  28562464 ttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctct 28562525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 40169718 - 40169641
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||| |||||||||||| ||||||| | || ||| |||| |||||||||||||||| | |||| |||| || |||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctaccccaattctct 40169641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 42187548 - 42187471
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||| ||||| ||||||| |||||||| ||||||| | || ||| |||| ||||||||||||| || |||||| ||||    
T  42187548 aatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctaccc 42187471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 43281744 - 43281675
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  43281744 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 43281675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 45836692 - 45836761
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  45836692 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 45836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 48202827 - 48202940
Alignment:
Q  93 tctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctcta 191  Q
    |||||||||  ||||||||| ||||| || ||| || ||||||||||     |||| |||||| |||||||| |||| ||||| ||| ||||||||||||    
T  48202827 tctcttatagtttttctaggccttcctctgcctataatgatttgactatccaccatatgatctactctccttactacagaatctacaagtcttctctcta 48202926  T
Q  192 catgccaaaaccac 205  Q
    |||||  |||||||    
T  48202927 catgcgcaaaccac 48202940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 21517473 - 21517529
Alignment:
Q  61 acttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttc 117  Q
    |||||||||| |||| ||  || ||||||||||||||||||  ||||||||||||||    
T  21517473 acttattaatctctaaatattttttaatagtttctcttatagtttttctaggtcttc 21517529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 22174185 - 22174117
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| |||||||| || || |||||||||||||||  ||||||| || |||| || |||||||||||    
T  22174185 attaatctctagatctttgtttatagtttctcttatagtttttctacgttttcctctgcctctagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 29653643 - 29653695
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttc 117  Q
    |||||| |||||||| ||||||||||||||||||| |  |||||| |||||||    
T  29653643 attaatctctagatctttcttaatagtttctcttacagtttttcttggtcttc 29653695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 32368452 - 32368508
Alignment:
Q  83 cttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||| ||||||||||  |||||||| ||||||  | |||||||||||||||||    
T  32368452 cttaatagcttctcttatagattttctagatcttcctttgcctctagtgatttgact 32368508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 46356069 - 46356137
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||| ||||||  | |  ||| ||||||||| ||||||||||| |||||| ||||    
T  46356069 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccc 46356137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 37351627 - 37351420
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||| |||||||||  | |||||||  || |||||| |||||||| ||||| || |||||||| |||  ||||||||||||||||||||||||||    
T  37351627 agtgttctaacaaaaaccatatctttctccatctcattaatctctagatctttcttgattgtttctctaatagtttttctaggtcttcccctacctctag 37351528  T
Q  130 tgatttgactcctatccatctgatctcctctccttccta-cgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    ||||||| ||||  |||||||||||| |||||||| ||| || || |||| | |||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  37351527 tgatttgcctcccttccatctgatctactctccttactaccgcattcacatgacttctctccacatgcccaaaccactcaagtctagtttctaccatctt 37351428  T
Q  229 ttctacta 236  Q
    ||||||||    
T  37351427 ttctacta 37351420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 31454287 - 31454502
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctac--ctct 127  Q
    ||||||||||||||||||| || ||||||| | | |||||| ||||||||||  ||||||||||| ||||||  ||||||||||| ||||||||  ||||    
T  31454287 agtgttctatcaaaaaccatgtctttctccaattcattaatatctagatcctaattaatagtttcccttatagtttttctaggtcatcccctacatctct 31454386  T
Q  128 agtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatc 226  Q
    |  |||||||||||  |||||||||||| |||||||  |||| |||||| ||  ||||||||||||||||  |||||||   ||||||||||||||||||    
T  31454387 aaagatttgactcccctccatctgatctactctcctaactacagaatccgcatttcttctctctacatgcacaaaccac-caagtctagtttctaccatc 31454485  T
Q  227 ttttctactacaggtgc 243  Q
    |||||||||| ||||||    
T  31454486 ttttctactataggtgc 31454502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 21200733 - 21200561
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| |||| |||||||| ||| |||  ||||||||||||||| || || |||||||||||||| || ||||| |||||| ||||||||    
T  21200733 attaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactactctccatgtgatctactctcctt 21200634  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
     || | ||||| ||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||    
T  21200633 actgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 21200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 11581662 - 11581460
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||| ||||| || || ||||| | ||| ||| || | |||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||    
T  11581662 tgttctataaaaaatcatgtctttcttcaactcatttatctatagatctttcttaatagtttctcttatagtttttctaggtcttctcatacctctagtg 11581563  T
Q  132 atttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctttt 230  Q
    |||||||||   | |||||||| | |||| ||| ||||  ||| |||| ||||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  11581562 atttgactcacctacatctgatgtactcttcttactacataattcacatgtcttctctctacatacccaaaccacctaagtctagtttctaccatctttt 11581463  T
Q  231 cta 233  Q
    |||    
T  11581462 cta 11581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 39600785 - 39600955
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||| |||||||| |  || |||||    || ||||||||| |||||||  |||| |    
T  39600785 tctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctcttgcaatctgactatcctcgatctgatctactctcctcgctacag 39600884  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    |||| ||||||||||||| |||||||||||||||| | ||  |  |||| |||||||||||||||| ||||    
T  39600885 aatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggt 39600955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 26990410 - 26990322
Alignment:
Q  53 tttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcc 141  Q
    ||||||| ||| ||| || |||||||||||||| ||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||    
T  26990410 tttctccaactcattgatctctagatccttcttgatagtttctctaatagtttttctaggtcttcccctacctcgagtgatttgactcc 26990322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 50960754 - 50960914
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaatccacaggtctt 184  Q
    ||||||||||||||| |  ||||||||||||||| || |||||   |||  |||||   |||||||||||| |||| ||| |||| |   || |||||||    
T  50960754 taatagtttctcttaaattttttctaggtcttcctctccctctttcgatccgactctcctccatctgatctactcttctttctacaa---cataggtctt 50960850  T
Q  185 ctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||| ||||||| | || ||| ||||||||||||||||||||| |||||| ||||    
T  50960851 ctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccc 50960914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 49841801 - 49841625
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| | |||||| || |||||||||||||||||   |||||| |||||||| ||||||||||| |||||||| |  | |||||||| | ||||||||    
T  49841801 attaatctttagatctttgttaatagtttctcttattt-ttttct-ggtcttcctctacctctagtaatttgactacccttcatctgatttactctcctt 49841704  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
     |||  |||  || | |||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||| || ||||||    
T  49841703 actaaagaagtca-atgtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgc 49841625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 27893309 - 27893207
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    |||||||| ||||||| || || ||||||| ||| |||||| ||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||| ||    
T  27893309 agtgttctttcaaaaatcatgtctttctccaactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtcttcctctacctcaag 27893210  T
Q  130 tga 132  Q
    |||    
T  27893209 tga 27893207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 38431012 - 38430854
Alignment:
Q  86 aatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtctt 184  Q
    ||||||||||||| ||  ||||||| ||||||| ||||||||  |||||||||||   |||||||||||| |||| | | |||| | |||  |||||| |    
T  38431012 aatagtttctcttgtagtttttctaagtcttcctctacctcttttgatttgactctcctccatctgatctactcttcatactacaacatctgcaggtcgt 38430913  T
Q  185 ctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||| || | || | || ||| ||||||||||||||||||||| ||||||    
T  38430912 ctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgc 38430854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 233
Target Start/End: Complemental strand, 39235323 - 39235154
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    ||||| ||||| ||| ||| ||||||||| || ||||  |||| | |||||||| ||||||||  |||| |||||    |||||||||||| |||| | |    
T  39235323 attaacttctaaatctttcctaatagtttatcctatagtttttttgggtcttcctctacctcttttgatctgactttcctccatctgatctactcttcgt 39235224  T
Q  165 cctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
     |||| | ||| |||||||||||||||||||||| ||||||| | || ||| ||||||||||||||||||    
T  39235223 actacaacatctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 43255069 - 43254977
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||||||||| | ||||||||||| |||  |||||||||||| ||||||||||||||||| ||||| |  ||||||||| || ||||||||    
T  43255069 tctagatccttcctgatagtttctctcatagtttttctaggtctacccctacctctagtgatctgacttccctccatctgaactactctcctt 43254977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 3987116 - 3987054
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||||||||||||| |||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtg 3987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 7278637 - 7278481
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-g 170  Q
    |||||||| ||| ||| |||||||||||||  |||||||||| ||||  || || |||| |||||||| || |||||| ||||| |||||||| ||||      
T  7278637 tctagatctttcgtaacagtttctcttatagtttttctaggttttccaatatct-tagtaatttgactactctccatccgatctactctccttgctacaa 7278539  T
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    |||| |||||| | ||||||||||||| ||||||| | || | |||||| ||||||||    
T  7278538 aatctacaggtttgctctctacatgcccaaaccacatgagccgagtttccaccatctt 7278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 2340804 - 2340888
Alignment:
Q  55 tctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    ||||| ||| |||||| |||||||| |||||||||||||||||||||  ||| ||||||||| | ||| || |||||||||||||    
T  2340804 tctccgactcattaatctctagatctttcttaatagtttctcttatagttttcctaggtctttctctagctttagtgatttgact 2340888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 31261055 - 31261178
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacag 179  Q
    ||||| |||||||||||||||  ||||||||||||||| || ||||||||||||||||| |  |||||||||||| ||| | || ||||  |||| |||     
T  31261055 ttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactac-ctccatctgatctactcacattactacaaaatctacat 31261153  T
Q  180 gtcttctctctacatgccaaaacca 204  Q
     ||||||||| ||||||| ||||||    
T  31261154 atcttctctcaacatgcccaaacca 31261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 31453151 - 31453203
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttct 232  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  31453151 gtcttctctctacatgccaaaacaacctaagtctagtttctaccatcttttct 31453203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 49503766 - 49503830
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||||| ||||||| | || ||| ||||||||||||||||||||| ||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgc 49503830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 50249531 - 50249397
Alignment:
Q  106 ttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaacca 204  Q
    ||||||||||||| |||||||| ||||| |||||     ||||||||||| |||||||| |||  ||||| ||| |||||| ||||||||||| ||||||    
T  50249531 ttctaggtcttcctctacctctggtgatatgactatcccccatctgatctactctccttactaaagaatctacatgtcttcactctacatgcccaaacca 50249432  T
Q  205 ct---ttagtctagtttctaccatcttttctacta 236  Q
    |    | ||||||||||| ||||||||||||||||    
T  50249431 ccacctaagtctagtttccaccatcttttctacta 50249397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 54128451 - 54128379
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||| |||||||||||| ||||||| | || ||| ||||||||||||||||||||| |||||| ||||    
T  54128451 acaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccc 54128379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 238
Target Start/End: Complemental strand, 46140578 - 46140443
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 202  Q
    |||||||||||||||  | || |||||||| |||||   ||| ||||||||| || |  || |||| ||||| |||||||||||||||| ||| | ||||    
T  46140578 ttttctaggtcttcctattcccctagtgatctgactatcatcaatctgatctgctatttttactacagaatctacaggtcttctctctatatgtccaaac 46140479  T
Q  203 cactttagtctagtttctaccatcttttctactaca 238  Q
    ||| | ||||||||||| ||| ||||||||||||||    
T  46140478 cacctgagtctagtttccaccgtcttttctactaca 46140443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 40982081 - 40982007
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||| |||||||||||| ||||||||  |||||||||||||||  |  ||||||||||||||||    
T  40982081 attaatatctagatctttcttaatagttactcttatagtttttctaggtcttcctttgtctctagtgatttgact 40982007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 19676198 - 19676361
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    ||||||||||||||| |  |||||||||||||||  |||||||  |||| ||||||   || ||||||||| ||||   | |||| | ||| ||||||||    
T  19676198 taatagtttctcttacagtttttctaggtcttcct-tacctcttttgatctgactctcctctatctgatcttctctttgtactacagcatctacaggtct 19676296  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||| ||||| | || | | |||||| |||||||| ||||| |||||| ||||    
T  19676297 tctctctacatgccaataccacctaagccaattttctatcatcttttgtactataggtgctaccc 19676361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 19737103 - 19737003
Alignment:
Q  144 tccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||| |||| ||| |||| | ||| ||||||||||||||| |||||  ||||||| | |  ||| ||||||||||||||||||||| |||||    
T  19737103 tccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtg 19737004  T
Q  243 c 243  Q
    |    
T  19737003 c 19737003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 19758006 - 19757906
Alignment:
Q  144 tccatctgatctcctctccttcctacga-atccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||| |||| ||| |||| | ||| ||||||||||||||| |||||  ||||||| | |  ||| ||||||||||||||||||||| |||||    
T  19758006 tccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtg 19757907  T
Q  243 c 243  Q
    |    
T  19757906 c 19757906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 23534687 - 23534771
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    ||||||||||| |||||| |||| | |||||||| |||||||||||||| | |||   ||||||||||||| |||||||| ||||    
T  23534687 taatagtttctgttataatttttttgggtcttcctctacctctagtgatctaactatcatccatctgatctactctccttactac 23534771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 52138873 - 52138801
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  52138873 acaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 52138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 41842687 - 41842794
Alignment:
Q  144 tccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||| |||||| ||||| || |||| ||||| || | |||||||||||||| || ||||||| | || || ||||| |||||||||||||||| |||||    
T  41842687 tccatttgatctactctcattactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtg 41842786  T
Q  243 caacccaa 250  Q
    | ||||||    
T  41842787 ctacccaa 41842794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 22902971 - 22902893
Alignment:
Q  77 atccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatct 155  Q
    ||||||||| |||| |||||||||   |||||||  ||||||||||| ||||||||||| |||||  ||||||||||||    
T  22902971 atccttctttatagcttctcttatggtttttctatatcttcccctacatctagtgatttaactcccctccatctgatct 22902893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 28245503 - 28245438
Alignment:
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||| ||||||  | |||||| ||||||||| ||||||||||| |||||| ||||    
T  28245503 ttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgctaccc 28245438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 29475871 - 29475805
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| |||||||| |||||||||||||||  ||||  ||||||||||||||| || |||||||||||    
T  29475871 attaatctctagatctttcttaatagtttct--tatagcttttctaggtcttcctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 46431776 - 46431911
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| || ||||||||||||||||||  |||||||| |||    || ||||||||||||||| |    ||||||| |||| ||||||||    
T  46431776 attaatctctagatcttttttaatagtttctcttatagtttttctagttct----ctgcctctagtgatttgagtatcctccatcttatctactctcctt 46431871  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
     |||| ||||| |||| ||  ||||||||||||| |||||||    
T  46431872 actacagaatctacagatc--ctctctacatgcccaaaccac 46431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 48508413 - 48508280
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga 171  Q
    |||| ||||||  |||| ||||||||||||  ||| ||||||||||| ||||||||  |||  ||||||   |||||||||||| |||| ||| | || |    
T  48508413 tctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacaa 48508314  T
Q  172 -atccacaggtcttctctctacatgccaaaacca 204  Q
     ||| || ||||||||||||||||||| ||||||    
T  48508313 catctacgggtcttctctctacatgcccaaacca 48508280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 659685 - 659541
Alignment:
Q  90 gtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctct 188  Q
    |||||||||| |  |||||||||||||||  | ||||||||||||| ||| || ||| |||| ||  |||| ||| |||| ||||| |||  | ||||||    
T  659685 gtttctcttacagtttttctaggtcttcctttgcctctagtgatttcactactctccctctggtcaactctgcttactacagaatctacaaattttctct 659586  T
Q  189 ctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    ||||||||| ||||||| | ||   ||||||||| ||||||||||    
T  659585 ctacatgcccaaaccacctaagctaagtttctactatcttttcta 659541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 36820074 - 36820122
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggt 113  Q
    |||||| |||||||| |||||||||||||||||||||  ||||||||||    
T  36820074 attaatctctagatctttcttaatagtttctcttatagtttttctaggt 36820122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 39535651 - 39535715
Alignment:
Q  178 aggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||||| |||| ||||||| | || |  |||||||||||||||||||||| |||||    
T  39535651 aggtcttctctctacttgcctaaaccacctaagccgggtttctaccatcttttctactataggtg 39535715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 42510133 - 42510290
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    |||| |||||||| |||  |||||||||||||||  | ||||||||||| |||||    |||||||||||| |||||||| | ||  |||| | ||||||    
T  42510133 taatggtttctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgatctactctccttaccacaaaatctataggtct 42510232  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
      |||||||||| | ||||||| | || ||| |||| || ||||||||||||| ||||||    
T  42510233 --tctctacatgtccaaaccacctaagcctattttccactatcttttctactataggtgc 42510290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 45289188 - 45289359
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttc-taggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcct 163  Q
    |||||| |||| ||| ||| ||||||||||||||||| |||||| ||| |||||| ||| |||| || || | |||    |||||||||||| |||| ||    
T  45289188 attaatctctaaatctttcctaatagtttctcttata-gttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactcttct 45289286  T
Q  164 tcctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctact 235  Q
    | |||| || || ||| || |||||||||| |||| ||||||| | || ||| |||| |||||||||||||||    
T  45289287 tactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctact 45289359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 48734344 - 48734404
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||| ||||||||||||||||| ||||||| | || ||| |||||||||||| ||||||||    
T  48734344 acagttcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctacta 48734404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 11284160 - 11284102
Alignment:
Q  82 tcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcc 141  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||| ||| || |||||    
T  11284160 tcttaatagtttctcttata-gttttctaggtcttcctctacatctaatgaatttactcc 11284102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 31337758 - 31337809
Alignment:
Q  199 aaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
    ||||||||| || |||||||| |||||||||||||||| |||||| ||||||    
T  31337758 aaaccacttaagcctagtttcaaccatcttttctactataggtgctacccaa 31337809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 38850188 - 38850133
Alignment:
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    ||||||||||||||||| ||||||  | |||||| ||||||||| |||||||||||    
T  38850188 tcttctctctacatgcccaaaccatctaagtctattttctaccaacttttctacta 38850133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 50632054 - 50632125
Alignment:
Q  186 tctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||||| | ||||||||| ||| ||||||||||  |||||||||||| | ||||||||| || |||||    
T  50632054 tctctacatgtccaaaccacttaagtttagtttctacattcttttctactatatgtgcaaccccaactctct 50632125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 21427686 - 21427732
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcc 118  Q
    ||||| || |||||||||||||||||||||| |||||| ||||||||    
T  21427686 tctaggtctttcttaatagtttctcttataatttttcttggtcttcc 21427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 46146265 - 46146207
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    ||||||||||||||| |||||  |||||||| ||||||  | |||||||||||||||||    
T  46146265 ttcttaatagtttcttttatagtttttctagatcttcctatgcctctagtgatttgact 46146207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 344920 - 345001
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||| |||||||||||| | |||| |||| || ||| |||||| |||||||||||||| | |||| |||| || |||||    
T  344920 acaggtcctctctctacatgaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaactctct 345001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 29375012 - 29374951
Alignment:
Q  171 aatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttct 232  Q
    |||| ||||||||| |||||||| ||| ||| ||| | |||| |||||||||||||||||||    
T  29375012 aatctacaggtcttttctctacaagcccaaatcacctaagtcgagtttctaccatcttttct 29374951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 35033216 - 35033147
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  35033216 ggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctaccc 35033147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 37228266 - 37228193
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    ||||||||||  || |||||||||||||| |||||   |||| |||||||| | || |||||||||||||||||    
T  37228266 ttaatttctaagtctttcttaatagtttcccttatcgtttttataggtctttctctgcctctagtgatttgact 37228193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 40743287 - 40743320
Alignment:
Q  107 tctaggtcttcccctacctctagtgatttgactc 140  Q
    |||||||||||||||| |||||||||||||||||    
T  40743287 tctaggtcttcccctaactctagtgatttgactc 40743320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 41482255 - 41482304
Alignment:
Q  85 taatagtttctcttataagtttt-ctaggtcttcccctacctctagtgat 133  Q
    ||||||||||||||| ||||||| ||||||||||| || |||||||||||    
T  41482255 taatagtttctcttaaaagtttttctaggtcttcctctgcctctagtgat 41482304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 26490385 - 26490321
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    |||||| | |||||||| | ||||||| | || ||| ||||||||||||||||||||| ||||||    
T  26490385 ggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgc 26490321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 33272235 - 33272291
Alignment:
Q  180 gtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||||||||| ||||||  | || ||| ||||||||| |||||||||||    
T  33272235 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctacta 33272291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 33755459 - 33755507
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||||||||||||||  |||||||||| |||| || |||||||||||    
T  33755459 taatagtttctcttatagtttttctaggttttcctctgcctctagtgat 33755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 38060504 - 38060432
Alignment:
Q  176 acaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    |||||||||||||||||||| | ||||||  | || ||| ||||||||| |||||||| || |||||| ||||    
T  38060504 acaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccc 38060432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 47233808 - 47233872
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| ||||||    
T  47233808 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgc 47233872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 236
Target Start/End: Original strand, 10617296 - 10617500
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctag 129  Q
    ||||||||||||||||||| || ||||||| ||| |||||| ||||||||||||||||| ||||||||||||  |||||||||| |||  ||||||||||    
T  10617296 agtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctag 10617395  T
Q  130 tgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatctt 228  Q
    ||||||||||||  ||||| |||  | ||||||||  | | ||| ||||||||||||| |||||||||  ||||||| | ||||||||||||| | ||||    
T  10617396 tgatttgactcccctccatttga--tactctccttaatgcagaaaccacaggtcttctttctacatgctcaaaccacctaagtctagtttcta-cgtctt 10617492  T
Q  229 ttctacta 236  Q
    ||||||||    
T  10617493 ttctacta 10617500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 9593825 - 9593975
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    |||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||   |||||||||||| |||| ||| |||| | ||| ||| ||||    
T  9593825 taatagtttctcttataatttttctaggtcttcctctacctct--tgatttgactctcctccatctgatctactcttcttactacagcatctacatgtct 9593922  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctacta 236  Q
    |||||||||||||| ||||||| | || ||| |||||||||||||||||||||    
T  9593923 tctctctacatgcccaaaccacctaagcctattttctaccatcttttctacta 9593975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 7513451 - 7513667
Alignment:
Q  30 agtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtctt-cccctacctcta 128  Q
    ||||||||||||||||||| || ||||||| ||| ||| || |||||||||||| ||| |||||||||||||  || || ||||||| ||||| ||||||    
T  7513451 agtgttctatcaaaaaccatgtctttctccaactcattcatctctagatccttcctaaaagtttctcttatagtttatccaggtcttccccctgcctcta 7513550  T
Q  129 gtgatttgactcctatccatctgatctcctctccttcctac-gaatccacagg-tcttctctctacatgccaaaaccactttagtctagtttctaccatc 226  Q
    |||||||||||||  || |||||||   |||| ||| ||||  ||||||| || | |||||| | |||||| ||||||| | ||||||| ||||||||||    
T  7513551 gtgatttgactcccctcaatctgattgactcttcttactacataatccacgggtttttctctttgcatgcccaaaccacctaagtctaggttctaccatc 7513650  T
Q  227 ttttctactacaggtgc 243  Q
    ||||||| || ||||||    
T  7513651 ttttctattataggtgc 7513667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 21870201 - 21870363
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctct--------ctacat 194  Q
    ||||||||||||||| || ||| ||||||||||||| || ||||||| |||| |||||||| ||||  |||| |||||||||||||        ||| ||    
T  21870201 ttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctactctccttactacaaaatctacaggtcttctctctaaatgcctaaat 21870300  T
Q  195 gccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||| ||||||| | || | |||||||||||||||||||||||||||||| |||| || |||||    
T  21870301 gcccaaaccacctaagccgagtttctaccatcttttctactacaggtgctaccccaactctct 21870363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 248
Target Start/End: Complemental strand, 31818696 - 31818533
Alignment:
Q  85 taatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtct 183  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||||||| | ||| |  ||||| |||||| || ||||| || | ||||| ||||||||    
T  31818696 taatagtttctcttatagtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctactttccttactgcagaatcaacaggtct 31818597  T
Q  184 tctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||  |||| ||||||||| | |||||| |||| ||||| |||| ||||| |||||| ||||    
T  31818596 tctctcatcatg-caaaaccacctaagtctattttccaccattttttgtactataggtgctaccc 31818533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 33084133 - 33084050
Alignment:
Q  174 ccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    ||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||||| | |||||| |||| || |||||    
T  33084133 ccacaggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactctct 33084050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 233
Target Start/End: Complemental strand, 7080554 - 7080356
Alignment:
Q  36 ctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgattt 135  Q
    |||||||||| || || ||||||| | | |||||| | |||||| ||||| |||||||||||||||  |||| ||||| |||| |||| ||||  |||||    
T  7080554 ctatcaaaaatcatgtatttctccgattcattaatctttagatctttcttgatagtttctcttatagtttttataggttttcctctacttctaaagattt 7080455  T
Q  136 gactcctatccatctgatctcctctcctt-cctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttcta 233  Q
    ||||| | |||||||||||  |||||||| || |  ||  || ||| |||||||| |  |||  ||||||||| ||| |||||||||||||||||||||    
T  7080454 gactcatctccatctgatccactctccttaccaaaaaaatcaaagggcttctctccatgtgctcaaaccacttcagtatagtttctaccatcttttcta 7080356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 38974 - 38883
Alignment:
Q  39 tcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagt 130  Q
    |||||||||| || ||||||| ||| ||| || |||||||||||| |||||||||||||||||  |||||||||| | |||| |||||||||    
T  38974 tcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtataccccgacctctagt 38883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 8364774 - 8364643
Alignment:
Q  32 tgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtg 131  Q
    |||||||||| |||||| || |   ||| ||||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||  || |||||||||    
T  8364774 tgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtcttcatcttcctctagtg 8364675  T
Q  132 atttgactcctatccatctgatctcctctcct 163  Q
    || ||||     |||||||||||| |||||||    
T  8364674 atctgacaatcctccatctgatctactctcct 8364643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 1681618 - 1681671
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcc 118  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  1681618 attaatctctagatccttcttaatagtttctcttataacttttttaggtcttcc 1681671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 246
Target Start/End: Original strand, 6906926 - 6907106
Alignment:
Q  66 ttaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttc 165  Q
    ||||| |||||||| ||||||||||| ||| |||||  ||||| || |||||  |||||||| ||||||||||| |  | |||||||||| ||||||||     
T  6906926 ttaatatctagatctttcttaatagtctct-ttatagcttttcaagatcttcatctacctctcgtgatttgactaccctgcatctgatctactctcctta 6907024  T
Q  166 ctac-gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaac 246  Q
    ||||  |||| ||| |||||||||||||||  | |||| || | || ||||||   ||||||| |||||||| |||||||||    
T  6907025 ctacaaaatctacatgtcttctctctacataaccaaactacgtaagcctagttctgaccatctattctactataggtgcaac 6907106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 24665980 - 24665818
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacgaa--tccaca 178  Q
    |||||||||||||||||| ||  | ||||| | ||||| || ||||| |||||  ||||    | |||||||||| |||||||| |||| ||  || |||    
T  24665980 ttcttaatagtttctcttgtagttattctatgacttcctctgcctctggtgatccgactatgcttcatctgatctactctccttactacaaaaatctaca 24665881  T
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggt 241  Q
    ||||||||||||||||| | ||||||| | || ||| |||||||||| |||||||||| ||||    
T  24665880 ggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 4948408 - 4948505
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    |||||||| |||| |||||||| |||| ||  |||| |||||||||| |||||||||||| |||||||    |||||||||||| |||||||| ||||    
T  4948408 tctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactac 4948505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 4955379 - 4955476
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac 169  Q
    |||||||| |||| |||||||| |||| ||  |||| |||||||||| |||||||||||| |||||||    |||||||||||| |||||||| ||||    
T  4955379 tctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactac 4955476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 34602 - 34670
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| | |||||| |||||||| ||||||||||||  ||||||||||||||| || |||||||||||    
T  34602 attaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 35199719 - 35199814
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctct 160  Q
    |||||| |||||||| ||| ||||||||||| |||||| |||||||  |||| | ||| |||||||||| ||||| |  |||||||||||| ||||    
T  35199719 attaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagctctagtgatatgactaccctccatctgatctactct 35199814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 1747738 - 1747812
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||||||||||||||  ||||||||||||   ||||||||||||||| || |||||||  ||||||||    
T  1747738 attaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctctagaaatttgact 1747812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 2079408 - 2079339
Alignment:
Q  181 tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaa 250  Q
    |||||||||||||| || ||||||||| || ||| |||| |||||||||||||||| || ||| ||||||    
T  2079408 tcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctacccaa 2079339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 43156 - 43224
Alignment:
Q  72 tctagatccttcttaatagtttctcttataagtt-ttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||| || |||||||||||||||| ||||| ||||||||||||| || ||||||| ||| |||||    
T  43156 tctagatctttattaatagtttctcttaaaagttgttctaggtcttccgctgcctctagagatctgact 43224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 3963945 - 3963895
Alignment:
Q  104 ttttctaggtcttcccctacctctagtgatttgactcctatccatctgatc 154  Q
    ||||||||||||||| |||||||| |||||||||||||  ||| |||||||    
T  3963945 ttttctaggtcttcctctacctctggtgatttgactcccctccttctgatc 3963895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 5258351 - 5258429
Alignment:
Q  170 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||| || ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  5258351 gaatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 5258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 33997657 - 33997715
Alignment:
Q  81 ttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||||||||||||||||||  ||| | ||||||||| || ||||||||| |||||||    
T  33997657 ttcttaatagtttctcttatagttttccaaggtcttcctctgcctctagtgttttgact 33997715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 6641651 - 6641684
Alignment:
Q  209 agtctagtttctaccatcttttctactacaggtg 242  Q
    |||||||||||||||||||||||||||| |||||    
T  6641651 agtctagtttctaccatcttttctactataggtg 6641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 28085446 - 28085377
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  28085446 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 28085377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 14389344 - 14389443
Alignment:
Q  144 tccatctgatctcctctccttcctacgaa-tccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtg 242  Q
    ||||||||||||  ||||||| |||| || || | |||||||||||||||||| | ||||||| | ||| | ||||| |||||||||||||| | |||||    
T  14389344 tccatctgatctattctccttactacaaagtctataggtcttctctctacatgtccaaaccacctaagt-ttgtttccaccatcttttctacgataggtg 14389442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 11982 - 11804
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||| |||||   | ||||||||||||| ||| |  |||| | ||||| |||||||     
T  11982 attaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgatttcactaccctccaccggatctactctcctc 11883  T
Q  165 cctacgaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgc 243  Q
      |||  | | |||| ||||||||||||||||| ||||||| | || | |||| |||||||||||||||| | ||||||    
T  11882 aatacatagctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgc 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 248
Target Start/End: Original strand, 1064 - 1229
Alignment:
Q  84 ttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctacga-atccacaggtc 182  Q
    ||||| |||||||| |||  ||| ||||||||||| ||||||||  | ||||||||| | ||||| |||||| |||| ||| | |||  ||| || ||||    
T  1064 ttaatggtttctctaatagttttcctaggtcttcctctacctcttttaatttgactcttctccatttgatctactcttcttaccacggcatctacgggtc 1163  T
Q  183 ttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||| | ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  1164 ttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 43991 - 44158
Alignment:
Q  91 tttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctccttcctac-gaatccacaggtcttctctc 189  Q
    |||| ||||||  |||| |||| | |||||||||||||||||| |||||    |||||||  ||| |||||||| |||  |||||   ||||||||||||    
T  43991 tttcacttatagtttttgtaggacctcccctacctctagtgatctgactatcctccatctagtctactctccttactagagaatctgaaggtcttctctc 44090  T
Q  190 tacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaacccaaaatctct 257  Q
    |||||||| ||||||| | || ||| ||||  ||||||||||||||| |||||| |||| || |||||    
T  44091 tacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctaccccaactctct 44158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 178517 - 178591
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgact 139  Q
    |||||| |||| ||| |||||||||||||||||||||  ||||||||||||| | |  ||||||||||| |||||    
T  178517 attaatctctatatctttcttaatagtttctcttatagtttttctaggtcttactccgcctctagtgatatgact 178591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 31538 - 31469
Alignment:
Q  179 ggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 248  Q
    ||||||||||||||||||| ||||||  | || ||| ||||||||| ||||||||||| |||||| ||||    
T  31538 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 31469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 66722 - 66654
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgat 133  Q
    |||||| |||||||| ||||||||| ||| | |||||| ||||||||||||||| || |||||| ||||    
T  66722 attaatctctagatctttcttaataattttttttataatttttctaggtcttcctctgcctctaatgat 66654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 346870 - 347011
Alignment:
Q  65 attaatttctagatccttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcctatccatctgatctcctctcctt 164  Q
    |||||| |||||||| || |||||||||| |||| ||  |||||||| |||| | || || |||| ||| || || |  |||||||||||  ||||||||    
T  346870 attaatctctagatcttttttaatagtttatcttgtagtttttctagatctttctctgcccctagcgatctgcctaccctccatctgatcaactctcctt 346969  T
Q  165 cctac-gaatccacaggtcttctctctacatgccaaaaccac 205  Q
     |||| ||||| | |||| |||||||||||| || |||||||    
T  346970 actacagaatctataggttttctctctacatacccaaaccac 347011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1609 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1609
Description:

Target: scaffold1609; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 1059 - 1111
Alignment:
Q  74 tagatccttcttaatagtttctcttataagttttctaggtcttcccctacctc 126  Q
    |||||||||| ||||||||||||||| |  |||||||||||  ||||||||||    
T  1059 tagatccttcctaatagtttctcttacagtttttctaggtccacccctacctc 1111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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