View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_342 (Length: 258)
Name: NF10145A_low_342
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_342 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 255
Target Start/End: Original strand, 23002397 - 23002641
Alignment:
| Q |
11 |
gtgttgtatattatttggatttgcttatctgaattaaggaaagatagaatagaaagaatgaaaataaaacattccaaaactccttattgtaatatatcat |
110 |
Q |
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| T |
23002397 |
gtgttgtatattatttggatttgcttatctgaatgaaggaaagatagaatagaaagaatgaaaataaaacattccaaaactccttattgtaatatatcat |
23002496 |
T |
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| Q |
111 |
tatgcctttccttgtttagtttaaacaagagttaaatttgcaagaatggtaaattcttcaatgattttgtgcgagaggattcatcatcttcattatgttt |
210 |
Q |
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| T |
23002497 |
tatgcctttcattggttagtttaaacaagagttaaatttgcaagaatggtaaattcttcaacgattttttgccagaggattcatcatcttcattatgttt |
23002596 |
T |
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| Q |
211 |
tttctttgatactttttaacctgtatgtatgagataaagcatcat |
255 |
Q |
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| T |
23002597 |
tttcattgatactttttaacccgtatgtatgtgataaagcatcat |
23002641 |
T |
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