View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_353 (Length: 253)
Name: NF10145A_low_353
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_353 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 34726037 - 34725818
Alignment:
| Q |
12 |
atgaactacctaatgttggatgatttccctgtctggtttatcttatttgagattcttttttcctatactgaagcgtcatttagtacactaccttcgaagg |
111 |
Q |
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| T |
34726037 |
atgaactacctaatgttggatgatttccctgtctggtttatcttatttgagattcttttttcctatactgaagcgtcatttagtacactaccttcgaagg |
34725938 |
T |
|
| Q |
112 |
aacttcaaggaagtacgaaggaacttcgaggaagtacataggcccctacaggtacatagtgggagtcgacgaaaagaaaatgttattggtcccttcaatt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
34725937 |
aacttcaaggaagtacgaaggaacttcgaggaagtacataggcccctacaggtacatagtgggagtcgacaaaaagaaaatgttattggtcccttcaatt |
34725838 |
T |
|
| Q |
212 |
ctttgtcaacttggtttatc |
231 |
Q |
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|||||||||||| ||||||| |
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| T |
34725837 |
ctttgtcaacttagtttatc |
34725818 |
T |
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