View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_355 (Length: 252)

Name: NF10145A_low_355
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_355
NF10145A_low_355
[»] chr2 (42 HSPs)
chr2 (1-242)||(19456781-19457022)
chr2 (3-242)||(21703526-21703765)
chr2 (1-230)||(27434807-27435036)
chr2 (1-242)||(27392630-27392871)
chr2 (45-241)||(23128973-23129169)
chr2 (45-241)||(28881852-28882048)
chr2 (45-241)||(20837556-20837752)
chr2 (45-241)||(12655180-12655376)
chr2 (57-241)||(37374799-37374983)
chr2 (51-190)||(261178-261317)
chr2 (51-241)||(34279087-34279277)
chr2 (51-158)||(12717018-12717125)
chr2 (51-190)||(13936957-13937096)
chr2 (51-157)||(21677595-21677701)
chr2 (51-190)||(12586490-12586629)
chr2 (51-158)||(31876002-31876109)
chr2 (51-190)||(34286043-34286182)
chr2 (51-190)||(34291103-34291242)
chr2 (51-158)||(34861401-34861508)
chr2 (51-158)||(37686322-37686429)
chr2 (51-158)||(37701587-37701694)
chr2 (51-190)||(37925182-37925321)
chr2 (51-158)||(39889783-39889890)
chr2 (51-190)||(9350407-9350546)
chr2 (63-158)||(16829763-16829858)
chr2 (63-158)||(16891623-16891718)
chr2 (51-190)||(27776896-27777035)
chr2 (51-190)||(27803381-27803520)
chr2 (51-190)||(27816663-27816802)
chr2 (51-190)||(40233188-40233327)
chr2 (51-241)||(11635602-11635792)
chr2 (51-241)||(11641791-11641981)
chr2 (51-181)||(19416912-19417042)
chr2 (51-157)||(22926441-22926547)
chr2 (63-151)||(32049526-32049614)
chr2 (1-55)||(31891688-31891742)
chr2 (78-190)||(39052268-39052380)
chr2 (3-55)||(3784481-3784533)
chr2 (3-55)||(16163426-16163478)
chr2 (3-55)||(27118515-27118567)
chr2 (3-55)||(34156838-34156890)
chr2 (3-55)||(34303665-34303717)
[»] chr3 (57 HSPs)
chr3 (3-242)||(16626920-16627158)
chr3 (1-242)||(18529999-18530240)
chr3 (1-230)||(15893121-15893350)
chr3 (45-241)||(8295578-8295774)
chr3 (45-241)||(8301723-8301919)
chr3 (45-241)||(4797112-4797308)
chr3 (45-241)||(15741541-15741737)
chr3 (45-241)||(18050865-18051061)
chr3 (51-241)||(4721234-4721424)
chr3 (51-241)||(35880369-35880559)
chr3 (45-241)||(29149214-29149410)
chr3 (51-241)||(18330277-18330467)
chr3 (51-241)||(6191919-6192109)
chr3 (51-241)||(8211344-8211534)
chr3 (51-241)||(18277517-18277707)
chr3 (51-241)||(18292818-18293008)
chr3 (51-241)||(18308119-18308309)
chr3 (51-230)||(10395750-10395929)
chr3 (51-190)||(22871339-22871478)
chr3 (51-190)||(22886398-22886537)
chr3 (51-157)||(5466672-5466778)
chr3 (51-181)||(5596831-5596961)
chr3 (51-241)||(7072815-7073005)
chr3 (51-241)||(28116422-28116612)
chr3 (51-241)||(47023056-47023246)
chr3 (51-158)||(18224877-18224984)
chr3 (63-241)||(5013315-5013493)
chr3 (51-229)||(6542939-6543117)
chr3 (57-158)||(4347155-4347256)
chr3 (57-158)||(28020964-28021065)
chr3 (63-158)||(17985433-17985528)
chr3 (51-190)||(18242381-18242520)
chr3 (51-190)||(20577327-20577466)
chr3 (63-193)||(7996213-7996343)
chr3 (63-193)||(10642721-10642851)
chr3 (45-151)||(20065739-20065845)
chr3 (51-241)||(21674296-21674486)
chr3 (51-181)||(36997554-36997684)
chr3 (51-181)||(51781674-51781804)
chr3 (51-190)||(11110826-11110965)
chr3 (51-157)||(4416603-4416709)
chr3 (51-181)||(24327822-24327952)
chr3 (51-157)||(28338989-28339095)
chr3 (51-157)||(31964938-31965044)
chr3 (51-157)||(50134536-50134642)
chr3 (51-154)||(5609787-5609890)
chr3 (51-181)||(51796762-51796893)
chr3 (51-127)||(29665450-29665526)
chr3 (51-190)||(48465569-48465708)
chr3 (3-80)||(22387992-22388069)
chr3 (3-55)||(4625736-4625788)
chr3 (3-55)||(5652179-5652231)
chr3 (3-55)||(5713016-5713068)
chr3 (3-55)||(5723926-5723978)
chr3 (3-55)||(5757499-5757551)
chr3 (3-55)||(5768390-5768442)
chr3 (3-55)||(17994198-17994250)
[»] scaffold0124 (2 HSPs)
scaffold0124 (3-242)||(20053-20292)
scaffold0124 (45-241)||(30095-30291)
[»] chr4 (24 HSPs)
chr4 (3-242)||(15227529-15227768)
chr4 (1-240)||(15285299-15285538)
chr4 (3-242)||(1899916-1900155)
chr4 (1-242)||(14235899-14236140)
chr4 (45-241)||(14664675-14664871)
chr4 (1-242)||(15391706-15391948)
chr4 (45-241)||(17013657-17013853)
chr4 (51-241)||(24592735-24592925)
chr4 (51-241)||(14763728-14763918)
chr4 (51-241)||(36344936-36345126)
chr4 (51-241)||(6569510-6569700)
chr4 (51-241)||(14098198-14098388)
chr4 (51-241)||(19372918-19373108)
chr4 (51-158)||(31126942-31127049)
chr4 (63-241)||(27163753-27163931)
chr4 (51-158)||(30753482-30753589)
chr4 (51-190)||(54833098-54833237)
chr4 (51-181)||(18801046-18801176)
chr4 (51-181)||(33674234-33674364)
chr4 (51-229)||(40106062-40106240)
chr4 (63-241)||(5005527-5005705)
chr4 (63-158)||(21969441-21969536)
chr4 (51-190)||(39850331-39850470)
chr4 (3-55)||(24460978-24461030)
[»] chr1 (7 HSPs)
chr1 (1-242)||(20460748-20460989)
chr1 (1-242)||(16208399-16208640)
chr1 (45-241)||(41793726-41793922)
chr1 (51-190)||(10962362-10962501)
chr1 (51-190)||(51637910-51638049)
chr1 (51-181)||(28584682-28584812)
chr1 (3-55)||(20340708-20340760)
[»] chr7 (29 HSPs)
chr7 (3-230)||(16040980-16041207)
chr7 (3-242)||(16450257-16450496)
chr7 (1-241)||(16518676-16518916)
chr7 (1-241)||(16503640-16503880)
chr7 (45-241)||(2154216-2154412)
chr7 (45-241)||(10917169-10917365)
chr7 (52-241)||(11425087-11425276)
chr7 (51-241)||(5127635-5127825)
chr7 (51-241)||(31124554-31124744)
chr7 (51-193)||(45387034-45387176)
chr7 (51-241)||(5147650-5147840)
chr7 (51-241)||(24592851-24593041)
chr7 (51-190)||(9618345-9618484)
chr7 (51-158)||(26275404-26275511)
chr7 (51-157)||(4145433-4145539)
chr7 (51-241)||(16736770-16736960)
chr7 (51-241)||(16751824-16752014)
chr7 (51-241)||(17523175-17523365)
chr7 (51-241)||(17529850-17530040)
chr7 (51-156)||(26320179-26320284)
chr7 (51-158)||(3445020-3445127)
chr7 (51-181)||(11441263-11441393)
chr7 (51-158)||(26486054-26486161)
chr7 (51-190)||(26670224-26670363)
chr7 (51-158)||(31564709-31564816)
chr7 (57-241)||(26434900-26435084)
chr7 (51-190)||(26538183-26538322)
chr7 (3-55)||(31088723-31088775)
chr7 (3-55)||(45733292-45733344)
[»] chr5 (49 HSPs)
chr5 (1-243)||(23891855-23892097)
chr5 (1-242)||(25198682-25198923)
chr5 (47-241)||(24951761-24951955)
chr5 (45-241)||(24688472-24688668)
chr5 (45-241)||(30934287-30934483)
chr5 (45-241)||(23752765-23752961)
chr5 (45-241)||(23718303-23718500)
chr5 (45-241)||(11549005-11549201)
chr5 (45-240)||(22999429-22999624)
chr5 (51-241)||(33777138-33777328)
chr5 (51-241)||(15659081-15659271)
chr5 (51-229)||(40473873-40474051)
chr5 (45-190)||(2510753-2510898)
chr5 (51-190)||(9317153-9317292)
chr5 (51-190)||(6874004-6874143)
chr5 (51-158)||(12131889-12131996)
chr5 (3-78)||(22888287-22888362)
chr5 (51-158)||(24681171-24681278)
chr5 (51-158)||(24723698-24723805)
chr5 (51-158)||(37771320-37771427)
chr5 (51-241)||(5637561-5637751)
chr5 (51-157)||(8665796-8665902)
chr5 (51-193)||(15759178-15759320)
chr5 (63-241)||(18375745-18375923)
chr5 (63-241)||(30151669-30151847)
chr5 (51-229)||(37358976-37359154)
chr5 (57-190)||(9548870-9549003)
chr5 (57-181)||(41674420-41674544)
chr5 (51-190)||(18501069-18501208)
chr5 (51-190)||(26480094-26480233)
chr5 (63-190)||(30168171-30168298)
chr5 (51-190)||(31431130-31431269)
chr5 (51-158)||(31826740-31826847)
chr5 (51-158)||(37671813-37671920)
chr5 (51-190)||(37754670-37754809)
chr5 (51-241)||(3789177-3789367)
chr5 (45-190)||(34616223-34616368)
chr5 (63-158)||(33516090-33516185)
chr5 (51-241)||(43077900-43078090)
chr5 (45-158)||(32599784-32599897)
chr5 (51-190)||(13325165-13325304)
chr5 (63-181)||(28648937-28649055)
chr5 (52-158)||(28960120-28960226)
chr5 (51-181)||(29967387-29967517)
chr5 (51-181)||(30029126-30029256)
chr5 (3-55)||(11325634-11325686)
chr5 (3-55)||(13184918-13184970)
chr5 (3-55)||(13440764-13440816)
chr5 (3-55)||(33877087-33877139)
[»] chr8 (22 HSPs)
chr8 (1-241)||(16283091-16283331)
chr8 (1-242)||(22081205-22081446)
chr8 (45-241)||(19687740-19687936)
chr8 (45-241)||(16277196-16277392)
chr8 (45-241)||(14557269-14557465)
chr8 (45-241)||(2137636-2137832)
chr8 (45-241)||(27609282-27609478)
chr8 (51-241)||(18710228-18710418)
chr8 (51-241)||(19674080-19674270)
chr8 (51-181)||(31490133-31490263)
chr8 (45-157)||(31354250-31354362)
chr8 (51-158)||(19208743-19208850)
chr8 (51-190)||(19286158-19286297)
chr8 (63-190)||(28362350-28362477)
chr8 (51-229)||(3329902-3330080)
chr8 (51-229)||(29828967-29829145)
chr8 (51-190)||(19518526-19518665)
chr8 (51-181)||(33258425-33258555)
chr8 (51-241)||(12093116-12093306)
chr8 (1-55)||(44562932-44562986)
chr8 (3-55)||(19659371-19659423)
chr8 (3-55)||(9354453-9354505)
[»] scaffold0089 (3 HSPs)
scaffold0089 (1-241)||(29405-29645)
scaffold0089 (45-241)||(40487-40683)
scaffold0089 (45-241)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-242)||(21208-21449)
[»] scaffold0143 (1 HSPs)
scaffold0143 (45-241)||(26934-27130)
[»] chr6 (41 HSPs)
chr6 (45-241)||(13299312-13299508)
chr6 (45-241)||(22935238-22935434)
chr6 (45-241)||(23857683-23857879)
chr6 (45-241)||(24863356-24863552)
chr6 (50-242)||(20160345-20160534)
chr6 (50-242)||(22172297-22172486)
chr6 (45-241)||(15424678-15424874)
chr6 (45-241)||(26988640-26988836)
chr6 (45-241)||(26999712-26999908)
chr6 (45-190)||(24304979-24305124)
chr6 (51-190)||(26918070-26918209)
chr6 (57-241)||(16749493-16749677)
chr6 (51-241)||(29549117-29549307)
chr6 (45-241)||(27044029-27044225)
chr6 (51-241)||(3695702-3695892)
chr6 (3-84)||(22477592-22477673)
chr6 (45-241)||(17024901-17025097)
chr6 (51-158)||(4525011-4525118)
chr6 (51-158)||(4757483-4757590)
chr6 (51-190)||(4772687-4772826)
chr6 (51-190)||(27007402-27007541)
chr6 (51-190)||(27484807-27484946)
chr6 (51-158)||(29572735-29572842)
chr6 (51-190)||(29501096-29501235)
chr6 (63-158)||(30558395-30558490)
chr6 (51-190)||(34463728-34463867)
chr6 (51-241)||(4546151-4546341)
chr6 (51-181)||(16944394-16944524)
chr6 (51-241)||(28207081-28207271)
chr6 (57-157)||(26778000-26778100)
chr6 (51-158)||(27360377-27360484)
chr6 (51-158)||(27450720-27450827)
chr6 (51-190)||(16673817-16673956)
chr6 (51-229)||(4724510-4724688)
chr6 (57-158)||(26116792-26116893)
chr6 (1-55)||(28162485-28162539)
chr6 (48-229)||(27272947-27273128)
chr6 (52-229)||(27630077-27630254)
chr6 (3-55)||(8892626-8892678)
chr6 (3-55)||(13522389-13522441)
chr6 (3-55)||(33374572-33374624)
[»] scaffold0029 (1 HSPs)
scaffold0029 (51-241)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (51-241)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (47-241)||(48568-48769)
[»] scaffold0144 (1 HSPs)
scaffold0144 (51-241)||(26626-26816)
[»] scaffold0350 (1 HSPs)
scaffold0350 (51-158)||(7663-7770)
[»] scaffold0237 (1 HSPs)
scaffold0237 (63-241)||(15366-15544)
[»] scaffold0038 (1 HSPs)
scaffold0038 (51-241)||(7579-7769)
[»] scaffold0159 (1 HSPs)
scaffold0159 (51-154)||(9490-9593)
[»] scaffold0415 (1 HSPs)
scaffold0415 (51-190)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (51-91)||(157-197)
[»] scaffold0260 (1 HSPs)
scaffold0260 (3-55)||(3031-3083)


Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 19456781 - 19457022
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19456781 aaggatgctgaaagtattgcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatac 19456880  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456881 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 19456980  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| |||||||||||| |||||||||||| || ||||||||    
T  19456981 ctgacagcttcttctaggcgagtccccatggtgaccatctca 19457022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 21703526 - 21703765
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21703526 ggatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 21703625  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  21703626 tccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctct 21703725  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    || ||||||||||||||||||||||||| || ||||||||    
T  21703726 gacagcttcttctagacgagtccccatggtgaccatctca 21703765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27434807 - 27435036
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  27434807 aaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacac 27434906  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||||    
T  27434907 catccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttct 27435006  T
Q  201 ctgatagcttcttctagacgagtccccatg 230  Q
    ||||  |||||||| |||||||| ||||||    
T  27435007 ctgacggcttcttccagacgagttcccatg 27435036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 27392871 - 27392630
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||   ||| ||||||  |||  || ||| |||||||  || ||||||||||||||||  ||||||| || ||||||||||||    
T  27392871 aaggatgctgagagtattgcatgtactggtacggtggaggtagctgagcagcatcgatgggggcaacagtagccacagattgactggttccggcagatac 27392772  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||||| ||||||| || ||||||||||| |||    
T  27392771 catccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcatttgcagaggattcacctttctcaaacacaataatgccgtct 27392672  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||| |||||||  || || |||||| || ||||||||    
T  27392671 ctgacagcctcttctaagcgggttcccatggtgaccatctca 27392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 23128973 - 23129169
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || |||||||| |    
T  23128973 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 23129072  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  23129073 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 23129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 28882048 - 28881852
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  28882048 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 28881949  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || |||| ||||||||| |||||||| |||||| || |||||||    
T  28881948 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacagcttcttccagacgagttcccatggtgaccatctc 28881852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 20837752 - 20837556
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  20837752 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 20837653  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | | ||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  20837652 acctctttgatgcattcacagtggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 20837556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 12655376 - 12655180
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  12655376 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 12655277  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  12655276 acctctttgatgcattcacagagggttcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 12655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 37374983 - 37374799
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  37374983 ataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 37374884  T
Q  157 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  37374883 cattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 37374799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 261178 - 261317
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  261178 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 261277  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  261278 tcgatgcattcacagaggattcagctttctcaaacacaat 261317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 34279277 - 34279087
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  34279277 gcattgataggagcaacagtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 34279178  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || | |||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  34279177 tcgacgtattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 34279087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 12717018 - 12717125
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  12717018 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 12717117  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  12717118 tcgatgca 12717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 13936957 - 13937096
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13936957 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13937056  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  13937057 tcgacgcattcacagaggattcagctttctcaaacacaat 13937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 21677595 - 21677701
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  21677595 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 21677694  T
Q  151 ttgatgc 157  Q
    | |||||    
T  21677695 tcgatgc 21677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 12586629 - 12586490
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| |||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  12586629 gcattgataggagcaacagtagtcatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 12586530  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  12586529 tcgacgcattcacagaggattcagctttctcaaacacaat 12586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 31876109 - 31876002
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  31876109 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 31876010  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  31876009 tcgatgca 31876002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 34286182 - 34286043
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34286182 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34286083  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34286082 tcgatgcactcacagaggattcagctttctcaaacacaat 34286043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 34291242 - 34291103
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34291242 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34291143  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34291142 tcgatgcactcacagaggattcagctttctcaaacacaat 34291103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 34861508 - 34861401
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  34861508 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 34861409  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  34861408 tcgatgca 34861401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 37686322 - 37686429
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37686322 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37686421  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  37686422 tcgatgca 37686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 37701587 - 37701694
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37701587 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37701686  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  37701687 tcgatgca 37701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 37925321 - 37925182
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37925321 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37925222  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  37925221 tcgatgcactcacagaggattcagctttctcaaacacaat 37925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 39889890 - 39889783
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  39889890 gcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 39889791  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  39889790 tcgatgca 39889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 9350407 - 9350546
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9350407 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9350506  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  9350507 tcgacgcattcacagaggattcagctttctcaaacacaat 9350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 16829763 - 16829858
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16829763 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16829858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 16891718 - 16891623
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16891718 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 27777035 - 27776896
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27777035 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27776936  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27776935 tcgacgcattcacagaggattcagctttctcaaacacaat 27776896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 27803520 - 27803381
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27803520 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27803421  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27803420 tcgacgcattcacagaggattcagctttctcaaacacaat 27803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 27816802 - 27816663
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27816802 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27816703  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27816702 tcgacgcattcacagaggattcagctttctcaaacacaat 27816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 40233327 - 40233188
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  40233327 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 40233228  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  40233227 tcgacgcattcacagaggattcagctttctcaaacacaat 40233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 11635602 - 11635792
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11635602 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11635701  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    |  | ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11635702 tcaacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 11635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 11641791 - 11641981
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11641791 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11641890  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    |  | ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11641891 tcaacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 11641981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 19416912 - 19417042
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19416912 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19417011  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  19417012 tcgacgcattcacagaggattcagctttctc 19417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 22926441 - 22926547
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22926441 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22926540  T
Q  151 ttgatgc 157  Q
    | |||||    
T  22926541 tcgatgc 22926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 32049614 - 32049526
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 151  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| ||||||||    
T  32049614 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctctt 32049526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31891688 - 31891742
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  31891688 aaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 31891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 39052268 - 39052380
Alignment:
Q  78 gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactt 177  Q
    |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||| || |||||  | ||||||||| |||    
T  39052268 gattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacagaggattcagctt 39052367  T
Q  178 tctcgaatacaat 190  Q
    |||| || |||||    
T  39052368 tctcaaacacaat 39052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 3784533 - 3784481
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  3784533 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 3784481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 16163478 - 16163426
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  16163478 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 16163426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 27118567 - 27118515
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| |||||||||||| |||||||||||||  || ||| ||||||||    
T  27118567 ggatgctgagagtattgcgcatgcgggtacgacggaggtagctgagcagcatt 27118515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 34156890 - 34156838
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  34156890 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34156838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 34303665 - 34303717
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  34303665 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34303717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 16626920 - 16627158
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626920 ggatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 16627019  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627020 tccctacttctgtttctt-cttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 16627118  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    ||||||||||||||| |||||||||||| || ||||||||    
T  16627119 gatagcttcttctaggcgagtccccatggtgaccatctca 16627158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 18530240 - 18529999
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  18530240 aaggatgctgagagtattgcgcatacgggtacgatggaggtaactgggcagcattaataggggtaacagtagccatggattgactagttccggcagatac 18530141  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18530140 catccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttct 18530041  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  18530040 ctgacagcttcttctagacgagtccccatggtgaccatctca 18529999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 15893121 - 15893350
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||    
T  15893121 aaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccggctccggcagacac 15893220  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||  |||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||    
T  15893221 catccctacttccgtttctttcttcttgtggtgtccgttactatacctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttct 15893320  T
Q  201 ctgatagcttcttctagacgagtccccatg 230  Q
    |||| ||||||||| |||||||| ||||||    
T  15893321 ctgacagcttcttccagacgagttcccatg 15893350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 8295774 - 8295578
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  8295774 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 8295675  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || ||  |||  |||||||| |||||||| |||||| || |||||||    
T  8295674 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccttgacggcttcttccagacgagttcccatggtgaccatctc 8295578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 8301723 - 8301919
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| || || || ||||| |    
T  8301723 tgggcagcattgataggagcaacaatagccatggattgaccggctccggcagacaccatccatacttccgtttctttcttcttgtggtgtccattaccat 8301822  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    |||||||||| |||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  8301823 acctctttgacgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 8301919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 4797112 - 4797308
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  4797112 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 4797211  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  4797212 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 4797308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 15741541 - 15741737
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || || || |    
T  15741541 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccat 15741640  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  15741641 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 15741737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 18051061 - 18050865
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  18051061 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 18050962  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  18050961 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 18050865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 4721424 - 4721234
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  4721424 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 4721325  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  4721324 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 4721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 35880559 - 35880369
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  35880559 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 35880460  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  35880459 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 35880369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 29149214 - 29149410
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  29149214 tgggctgcattgataggagcaatagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 29149313  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  29149314 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 29149410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 18330467 - 18330277
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  18330467 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 18330368  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||  ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18330367 tcgatgcattcacagaggattcagctttctcgagcacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 18330277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 6192109 - 6191919
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||||||||||||||||||  | || ||||||| |||||| |||||||||||||| || || || ||||| |||||||    
T  6192109 gcattgataggagcaacagtagccatggattgaccggctccaactgacaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctct 6192010  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  6192009 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 6191919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 8211534 - 8211344
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8211534 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 8211435  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | || ||||| ||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  8211434 tcgatgcactcgcagaggactcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 8211344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 18277517 - 18277707
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18277517 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18277616  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18277617 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18277707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 18292818 - 18293008
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18292818 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18292917  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18292918 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 18308119 - 18308309
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18308119 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18308218  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18308219 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18308309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 230
Target Start/End: Complemental strand, 10395929 - 10395750
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  10395929 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 10395830  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatg 230  Q
    | ||||||||  | ||||||||| ||||||| || |||||||| || || ||||  ||||| || ||||| || ||||||    
T  10395829 tcgatgcattcacagaggattcagctttctcaaacacaataattccatccctgacggcttcctcaagacgggttcccatg 10395750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 22871339 - 22871478
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22871339 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22871438  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22871439 tcgatgcactcgcagaggattcagctttctcaaacacaat 22871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 22886398 - 22886537
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22886398 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22886497  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22886498 tcgatgcactcgcagaggattcagctttctcaaacacaat 22886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 5466778 - 5466672
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5466778 gcattgataggtgcaacagtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5466679  T
Q  151 ttgatgc 157  Q
    |||||||    
T  5466678 ttgatgc 5466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 5596831 - 5596961
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5596831 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5596930  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | |||||| | || |||||||||||||||||    
T  5596931 tcgatgcactcgcagaggattcaactttctc 5596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 7073005 - 7072815
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||||||||||| |||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  7073005 gcattgataggagcaacagtagccatggattgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7072906  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  7072905 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 7072815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 28116422 - 28116612
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28116422 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28116521  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | |  || |||||| ||||||| || |||||||| || || ||||  ||||| || ||||| || |||||| || |||||||    
T  28116522 tcgatgcactcgtagaagattcagctttctcaaacacaataattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 28116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 47023246 - 47023056
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  47023246 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 47023147  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||  ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  47023146 tcgatgcattcacagaggattcggctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 47023056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 18224984 - 18224877
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  18224984 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 18224885  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  18224884 tcgatgca 18224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 5013493 - 5013315
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  5013493 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 5013394  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5013393 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5013315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 6542939 - 6543117
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6542939 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6543038  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  6543039 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 6543117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 4347155 - 4347256
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  4347155 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 4347254  T
Q  157 ca 158  Q
    ||    
T  4347255 ca 4347256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 28021065 - 28020964
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| |||||||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||    
T  28021065 ataggagcaacagtagccatggattgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatg 28020966  T
Q  157 ca 158  Q
    ||    
T  28020965 ca 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 17985433 - 17985528
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |||||||||    
T  17985433 gcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgca 17985528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 18242520 - 18242381
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18242520 gcattgataggagcaacggtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18242421  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18242420 tcgacgcattcacagaggattcagctttctcaaacacaat 18242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 20577327 - 20577466
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  20577327 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 20577426  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  20577427 tcgacgcattcacagaggattcagctttctcaaacacaat 20577466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 7996343 - 7996213
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  7996343 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 7996244  T
Q  163 cggaggattcaactttctcgaatacaataat 193  Q
    | || |||||| ||||||| || ||||||||    
T  7996243 cagaagattcagctttctcaaacacaataat 7996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 10642851 - 10642721
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  10642851 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 10642752  T
Q  163 cggaggattcaactttctcgaatacaataat 193  Q
    | || |||||| ||||||| || ||||||||    
T  10642751 cagaagattcagctttctcaaacacaataat 10642721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 20065845 - 20065739
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| || ||||||||||| ||||| || ||||| |    
T  20065845 tgggctgcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtatctttcttcttgtgatgtccattaccat 20065746  T
Q  145 acctctt 151  Q
    |||||||    
T  20065745 acctctt 20065739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 21674486 - 21674296
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || |||||||||| |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  21674486 gcattgataggagccacggtagccatgggttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 21674387  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  21674386 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 21674296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 36997554 - 36997684
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  36997554 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 36997653  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||| | ||||||||| |||||||    
T  36997654 tcgacgcatttacagaggattcagctttctc 36997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 51781804 - 51781674
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  51781804 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 51781705  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||| | ||||||||| |||||||    
T  51781704 tcgacgcatttacagaggattcagctttctc 51781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 11110826 - 11110965
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| || ||||    
T  11110826 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctct 11110925  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  11110926 tcgacgcattcacagaggattcagctttctcaaacacaat 11110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 4416709 - 4416603
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4416709 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4416610  T
Q  151 ttgatgc 157  Q
    | |||||    
T  4416609 tcgatgc 4416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 24327952 - 24327822
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24327952 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24327853  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  24327852 tcgacgcattcacagaggattcagctttctc 24327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 28339095 - 28338989
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28339095 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28338996  T
Q  151 ttgatgc 157  Q
    | |||||    
T  28338995 tcgatgc 28338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 31964938 - 31965044
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31964938 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31965037  T
Q  151 ttgatgc 157  Q
    | |||||    
T  31965038 tcgatgc 31965044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 50134536 - 50134642
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  50134536 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 50134635  T
Q  151 ttgatgc 157  Q
    | |||||    
T  50134636 tcgatgc 50134642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 5609787 - 5609890
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5609787 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5609886  T
Q  151 ttga 154  Q
    ||||    
T  5609887 ttga 5609890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 51796893 - 51796762
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatg-accgttaccgtacctc 149  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || ||  || ||||| || |||    
T  51796893 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctc 51796794  T
Q  150 tttgatgcatttgcggaggattcaactttctc 181  Q
    || || |||||| | ||||||||| |||||||    
T  51796793 ttcgacgcatttacagaggattcagctttctc 51796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 29665450 - 29665526
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 127  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| ||||||||||||||    
T  29665450 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttctt 29665526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 48465708 - 48465569
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  48465708 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 48465609  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  48465608 tcgacgcattcacagaggattcagctttctcaaacacaat 48465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 22387992 - 22388069
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggat 80  Q
    ||||||||| ||||| | ||||| ||||| |||||    ||||| |||||||| ||||| ||||||||||||||||||    
T  22387992 ggatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccatggat 22388069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4625788 - 4625736
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  4625788 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 4625736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5652231 - 5652179
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5652231 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5713068 - 5713016
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5713068 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5713016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5723978 - 5723926
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5723978 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5723926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 5757499 - 5757551
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5757499 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5757551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 5768390 - 5768442
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  5768390 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5768442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 17994198 - 17994250
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  17994198 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 17994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 20292 - 20053
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20292 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 20193  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20192 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaacacaataatgccttctct 20093  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    || |||||||||||| |||||||||||| || ||||||||    
T  20092 gacagcttcttctaggcgagtccccatggtgaccatctca 20053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 30291 - 30095
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  30291 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 30192  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||| | ||||||||  | ||||||||  |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  30191 acctcctcgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 30095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 15227768 - 15227529
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15227768 ggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatacca 15227669  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15227668 tccctacttctgtttctttcttcttatgatgaccgttaccatgcctctttgatgcatttgcggaggattcatctttctcgaatacaataatgccttctct 15227569  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    || ||||||||||||||||||||||||| || ||||||||    
T  15227568 gacagcttcttctagacgagtccccatggtgaccatctca 15227529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15285299 - 15285538
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||||||| |||||| | |||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15285299 aaggatgctgagagtattgcgcatatgggtacaatggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagatac 15285398  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285399 catccatacttctgtttctttcttcttatgatgaccgttaccgttcctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 15285498  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatct 240  Q
    |||| |||||||||||| |||||||||||| || ||||||    
T  15285499 ctgacagcttcttctaggcgagtccccatggtgaccatct 15285538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 1900155 - 1899916
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900155 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 1900056  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  1900055 tccctacttctgtttctttcttcttatgatgatcgttaccgtacctctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctct 1899956  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    || ||||||||| | ||||||||||||| || ||||||||    
T  1899955 gacagcttcttccaaacgagtccccatggtgaccatctca 1899916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14235899 - 14236140
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||  |||| |||||| | ||  |||||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||||    
T  14235899 aaggatgctgagagtattgcatatactggtacggcagaggtaactgagcagcattaataggggtaacagtggccatggattgactggttccggcagatac 14235998  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||   |||| ||||||||  |||||||||| ||||||||| |||||    
T  14235999 catccctacttctgtctctttcttcttatgatgaccattaccgtacttctttgatgtgcttgcagaggattcccctttctcgaacacaataatgtcttct 14236098  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||| |||||||  || || |||||| || ||||||||    
T  14236099 ctgacagcctcttctaagcgggttcccatggtgaccatctca 14236140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 14664871 - 14664675
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  14664871 tgggcagcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14664772  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| || |  ||||| || |||||||| |||||| || |||||||    
T  14664771 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctaacggcttcctccagacgagttcccatggtgaccatctc 14664675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 15391706 - 15391948
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaa-cagtagccatggattgaccggctccggcagata 99  Q
    ||||||||||| ||||||||   ||| | |||| ||||  || ||| ||| |||| || ||||||| |||||||||||||||||| || ||| |||||||    
T  15391706 aaggatgctgagagtattgcatgtactgatacggcggaggtagctgagcaacattgatgggggcaaacagtagccatggattgactggttccagcagata 15391805  T
Q  100 ccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttc 199  Q
    |||||||||||||||| |||||||||||||||||||| || || ||| || ||||||||||||| ||||||||| ||||| | || ||||||||||| ||    
T  15391806 ccatccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgcagaggattcacctttcccaaacacaataatgccatc 15391905  T
Q  200 tctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    ||||| ||| |||||||  || || |||||| || ||||||||    
T  15391906 tctgacagcctcttctaagcgggttcccatggtgaccatctca 15391948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 17013853 - 17013657
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  17013853 tgggctgcattgataggagcaacagtagccatggattgaccagctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 17013754  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  17013753 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 17013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 24592735 - 24592925
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |||||||    
T  24592735 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctct 24592834  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  24592835 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 24592925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 14763728 - 14763918
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  14763728 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 14763827  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  14763828 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 14763918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 36344936 - 36345126
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  36344936 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 36345035  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  36345036 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 36345126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 6569700 - 6569510
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  6569700 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 6569601  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||||| || ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  6569600 tcgatgcattcgcagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 6569510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 14098388 - 14098198
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  14098388 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 14098289  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  14098288 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 14098198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 19373108 - 19372918
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19373108 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19373009  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  19373008 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 19372918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 31126942 - 31127049
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31126942 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 31127041  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  31127042 tcgatgca 31127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 27163753 - 27163931
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  27163753 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 27163852  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  27163853 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 27163931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 30753589 - 30753482
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || | |||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  30753589 gcattgataggtgcaacagtagccatggattgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 30753490  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  30753489 tcgatgca 30753482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 54833237 - 54833098
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  54833237 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 54833138  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  54833137 tcgacgcactcgcagaagattcagctttctcaaacacaat 54833098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 18801046 - 18801176
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| |||||||||||||||||||| || || || ||||| || ||||    
T  18801046 gcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctct 18801145  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  18801146 tcgacgcattcacagaggattcagctttctc 18801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 33674234 - 33674364
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33674234 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 33674333  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||| | ||||||||| |||||||    
T  33674334 tcgacgcatttacagaggattcagctttctc 33674364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 40106062 - 40106240
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || |  ||||||||||| |    
T  40106062 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttt 40106161  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| ||||||||    
T  40106162 tcgatgcactcgtagaagattcagctttctcaaacacaatgattccatccctgactgcttcctcaagacgggtccccat 40106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 5005705 - 5005527
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || | | | |    
T  5005705 gcaacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgtactcg 5005606  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5005605 cagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 21969536 - 21969441
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| |||||||| ||||||    
T  21969536 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgca 21969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 39850470 - 39850331
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  39850470 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 39850371  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  39850370 tcgacgtattcacagaggattcagctttctcaaacacaat 39850331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 24460978 - 24461030
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  24460978 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 24461030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20460989 - 20460748
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20460989 aaggatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagtagccatggattgaccggctccggcagatac 20460890  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  20460889 catccctacttctatttctttcttcttatgatgaccgttaccgtacctctttgatgcattggcggaggattcaactttctcgaatataataatgccttct 20460790  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| |||||||||||| |||||||||||| || ||||||||    
T  20460789 ctgacagcttcttctaggcgagtccccatggtgaccatctca 20460748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 16208399 - 16208640
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||   ||| | |||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208399 aaggatgctgagagtattgcatgtactgatacggcggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 16208498  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  16208499 catctctacttctgtttctttcttcttatgatgaccgttaccgtaactctttgatgcatttacagaggattcaactttctcaaatacaataatgccttct 16208598  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  16208599 ctgacagcttcttctagacgagtccccatggtgaccatctca 16208640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 41793726 - 41793922
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  41793726 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 41793825  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    |||||||||||||| |  | |||| |||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  41793826 acctctttgatgcactcacagaggtttcagctttctcaaacacaatgatcccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 41793922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 10962501 - 10962362
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  10962501 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 10962402  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  10962401 tcgatgcattcacagaggattcagctttctcaaacacaat 10962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 51638049 - 51637910
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  51638049 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 51637950  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  51637949 tcgacgcacttgcagaagattcagctttctcaaacacaat 51637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 28584812 - 28584682
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  28584812 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 28584713  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  28584712 tcgacgcattcacagaggattcagctttctc 28584682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 20340708 - 20340760
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| |||||||||| |||||||||||||||  || ||| ||||||||    
T  20340708 ggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 20340760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 16041207 - 16040980
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041207 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 16041108  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16041107 tccctacttctgtttctttcttcttatgatgaccgttaccatacctctttgatgcatttacggaggattcaactttctcgaatacaataatgccttctct 16041008  T
Q  203 gatagcttcttctagacgagtccccatg 230  Q
    || |||||||||||||||||| ||||||    
T  16041007 gacagcttcttctagacgagttcccatg 16040980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 242
Target Start/End: Original strand, 16450257 - 16450496
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatacca 102  Q
    ||||||||| |||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16450257 ggatgctgagagtactgcgcgtacgggtacgacggaggtaactgggcagcattaataggggcaacagtagctatggattgaccggctccggcagatacca 16450356  T
Q  103 tccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctct 202  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  16450357 tccctacttttgtttctttcttcttatgatgaccgttaccgtatctttttgatgcatttacagaggattcaactttctcgaatacaataatgccttctct 16450456  T
Q  203 gatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    || ||||||||||||||||||||||||| || ||||||||    
T  16450457 gacagcttcttctagacgagtccccatggtgaccatctca 16450496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16518676 - 16518916
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  16518676 aaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacac 16518775  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||| | ||||||||| |||| ||||| ||||| || ||||||    
T  16518776 catccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcatttacagaggattcagctttttcgaacacaatgattccttct 16518875  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||  |||||||| |||||||| |||||| || |||||||    
T  16518876 ctgacggcttcttccagacgagttcccatggtgaccatctc 16518916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16503640 - 16503880
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  16503640 aaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacac 16503739  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||||    
T  16503740 catccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttct 16503839  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||  |||||||| |||||||| |||||| || |||||||    
T  16503840 ctgacggcttcttccagacgagttcccatggtgaccatctc 16503880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 2154412 - 2154216
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2154412 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2154313  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| ||  | || ||||  |||||||| |||||||| |||||| || |||||||    
T  2154312 acctctttgatgcattcacagaggattcagctttctcgaacacaatgatttcatccctgacggcttcttccagacgagttcccatggtgaccatctc 2154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 10917169 - 10917365
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  10917169 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 10917268  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| ||||||| || ||||| ||  | || || |  |||||||| |||||||| |||||| || |||||||    
T  10917269 acctctttgatgcattcacagaggattcagctttctcaaacacaatgatttcatccctaacggcttcttccagacgagttcccatggtgaccatctc 10917365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 241
Target Start/End: Original strand, 11425087 - 11425276
Alignment:
Q  52 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 151  Q
    |||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| ||||||||    
T  11425087 cattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 11425186  T
Q  152 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
     ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11425187 cgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 11425276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 5127825 - 5127635
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  5127825 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 5127726  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||| ||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5127725 tcgatgcattcacagaggactcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 5127635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 31124744 - 31124554
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  31124744 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 31124645  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||||| || ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  31124644 tcgatgcattcgcagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 31124554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 45387176 - 45387034
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  45387176 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 45387077  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataat 193  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  45387076 tcgacgcacttgcagaagattcagctttctcaaacacaataat 45387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 5147650 - 5147840
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||  ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5147650 gcattgataggagcaatggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5147749  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||||| || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5147750 tcgatgcattcgcagaagattcagctttctcaaacacaatgatcccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5147840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 24592851 - 24593041
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24592851 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24592950  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  24592951 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 24593041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 9618484 - 9618345
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9618484 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 9618385  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  9618384 tcgatgcactcacagaggattcagctttctcaaacacaat 9618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 26275404 - 26275511
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26275404 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26275503  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  26275504 tcgatgca 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 4145433 - 4145539
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4145433 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 4145532  T
Q  151 ttgatgc 157  Q
    | |||||    
T  4145533 tcgatgc 4145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 16736770 - 16736960
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16736770 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16736869  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16736870 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 16736960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 16751824 - 16752014
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16751824 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16751923  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16751924 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 16752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 17523365 - 17523175
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17523365 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17523266  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17523265 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 17529850 - 17530040
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17529850 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17529949  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17529950 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 26320179 - 26320284
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26320179 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26320278  T
Q  151 ttgatg 156  Q
    | ||||    
T  26320279 tcgatg 26320284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 3445127 - 3445020
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  3445127 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 3445028  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  3445027 tcgatgca 3445020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 11441393 - 11441263
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  11441393 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 11441294  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||| | ||||||||| |||||||    
T  11441293 tcgacgcatttacagaggattcagctttctc 11441263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 26486054 - 26486161
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  26486054 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 26486153  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  26486154 tcgatgca 26486161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 26670224 - 26670363
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26670224 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26670323  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26670324 tcgatgcactcacagaggattcagctttctcaaacacaat 26670363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 31564709 - 31564816
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31564709 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31564808  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  31564809 tcgatgca 31564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 26435084 - 26434900
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| | ||    
T  26435084 ataggagcaacagtggccatggactgaccggctcctgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtg 26434985  T
Q  157 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    || | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  26434984 cactcgtagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 26434900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 26538183 - 26538322
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  26538183 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 26538282  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  26538283 tcgacgcattcacagaggattcagctttctcaaacacaat 26538322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 31088723 - 31088775
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  31088723 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 31088775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 45733344 - 45733292
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  45733344 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 45733292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23892097 - 23891855
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  23892097 aaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgatcggctccggcagatac 23891998  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  23891997 catccctacttctgtttctttcttcttatgatgtccgttaccatacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttct 23891898  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctcat 243  Q
    |||| ||||||||| ||||||||||||||| || |||||||||    
T  23891897 ctgacagcttcttccagacgagtccccatggtgaccatctcat 23891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 25198923 - 25198682
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||||||||||   || |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25198923 aaggatgctgagagtacggcgcatatgggtacgacggaggcaattgggaagcattaataggagcaacagtagccatggattgaccggctccggcggatac 25198824  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  25198823 catccctacttctgtttccttcttcttatgatgtccgttaccgtacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttct 25198724  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||||||||| ||| ||||||||||| || ||||||||    
T  25198723 ctgacagcttcttccagatgagtccccatggtgaccatctca 25198682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 47 - 241
Target Start/End: Complemental strand, 24951955 - 24951761
Alignment:
Q  47 ggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtac 146  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |||    
T  24951955 ggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatac 24951856  T
Q  147 ctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  24951855 ctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 24951761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 24688472 - 24688668
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  24688472 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24688571  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  24688572 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 24688668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 30934483 - 30934287
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  30934483 tgggctgcattgataggagcaacagtagtcatggattggccggctccggtagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 30934384  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  30934383 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 30934287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 23752765 - 23752961
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23752765 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23752864  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  23752865 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 23752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 23718303 - 23718500
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23718303 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23718402  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagctt-cttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||| |||| |||||||| |||||| || |||||||    
T  23718403 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttccttccagacgagttcccatggtgaccatctc 23718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 11549201 - 11549005
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  11549201 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 11549102  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11549101 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 11549005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 22999429 - 22999624
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  22999429 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 22999528  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 240  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || ||||||    
T  22999529 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatct 22999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 33777328 - 33777138
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  33777328 gcattgataggagcaacagtagccatggattgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 33777229  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  33777228 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 33777138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 15659081 - 15659271
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15659081 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 15659180  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  15659181 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 15659271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 40473873 - 40474051
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  40473873 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 40473972  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  |||||||| ||||| || |||||    
T  40473973 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcttcaagacgggttcccat 40474051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 2510898 - 2510753
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  2510898 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 2510799  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    |||||||||||||| |  | ||||||||| ||||||| || |||||    
T  2510798 acctctttgatgcactcacagaggattcagctttctcaaacacaat 2510753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 9317292 - 9317153
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  9317292 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 9317193  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  9317192 ttgatgcactcacagaggattcagctttctcaaacacaat 9317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 6874143 - 6874004
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6874143 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6874044  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  6874043 ttgatgcactcacagaggattcagctttctcaaacacaat 6874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 12131996 - 12131889
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  12131996 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 12131897  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  12131896 tcgatgca 12131889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 22888362 - 22888287
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatgg 78  Q
    ||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22888362 ggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgg 22888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 24681278 - 24681171
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24681278 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24681179  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  24681178 tcgatgca 24681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 24723805 - 24723698
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24723805 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24723706  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  24723705 tcgatgca 24723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 37771320 - 37771427
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37771320 gcattgataggtgcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37771419  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  37771420 tcgatgca 37771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 5637751 - 5637561
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5637751 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5637652  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5637651 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5637561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 8665796 - 8665902
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8665796 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 8665895  T
Q  151 ttgatgc 157  Q
    | |||||    
T  8665896 tcgatgc 8665902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 15759178 - 15759320
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15759178 gcattgataggagcaacagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 15759277  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataat 193  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  15759278 tcgacgcacttgcagaagattcagctttctcaaacacaataat 15759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 18375745 - 18375923
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  18375745 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 18375844  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18375845 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18375923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 30151847 - 30151669
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  30151847 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 30151748  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  30151747 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 30151669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 37358976 - 37359154
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37358976 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37359075  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | |||||| | |  || |||||| ||||||| |||||||| || || |||||||  ||||| || ||||| || |||||    
T  37359076 tcgatgcactcgtagaagattcagctttctcaaatacaatgatcccatctctgactgcttcctcaagacgggttcccat 37359154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 9548870 - 9549003
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  9548870 ataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 9548969  T
Q  157 catttgcggaggattcaactttctcgaatacaat 190  Q
    || |  | ||||||||| ||||||| || |||||    
T  9548970 cactcacagaggattcagctttctcaaacacaat 9549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 41674544 - 41674420
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || |    
T  41674544 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacg 41674445  T
Q  157 catttgcggaggattcaactttctc 181  Q
    ||||  | ||||||||  |||||||    
T  41674444 cattcacagaggattcggctttctc 41674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 18501069 - 18501208
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18501069 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18501168  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18501169 tcgacgcattcacagaggattcagctttctcaaacacaat 18501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 26480233 - 26480094
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26480233 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 26480134  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26480133 tcgatgcactcacagaggattcagctttctcaaacacaat 26480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 30168298 - 30168171
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  30168298 gcaatagtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 30168199  T
Q  163 cggaggattcaactttctcgaatacaat 190  Q
    | ||||||||| ||||||| || |||||    
T  30168198 cagaggattcagctttctcaaacacaat 30168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 31431269 - 31431130
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31431269 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31431170  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  31431169 tcgatgcactcacagaggattcagctttctcaaacacaat 31431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 31826740 - 31826847
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31826740 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31826839  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  31826840 tcgatgca 31826847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 37671813 - 37671920
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37671813 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37671912  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  37671913 tcgatgca 37671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 37754809 - 37754670
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37754809 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37754710  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  37754709 tcgacgcacttgcagaagattcagctttctcaaacacaat 37754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 3789367 - 3789177
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3789367 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3789268  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  3789267 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 3789177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 34616368 - 34616223
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  34616368 tgggctgcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 34616269  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  34616268 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 34616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 33516185 - 33516090
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  33516185 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 33516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 43078090 - 43077900
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |  || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  43078090 gcattgataggtgcaacagtagccatagcttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 43077991  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  43077990 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcgagacgggttcccatggtgaccatctc 43077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 32599784 - 32599897
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| |    
T  32599784 tgggctgcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccat 32599883  T
Q  145 acctctttgatgca 158  Q
    ||||||| ||||||    
T  32599884 acctcttcgatgca 32599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 13325165 - 13325304
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13325165 gcattgataggagcaacggtagccattgattgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13325264  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  13325265 tcgatgcactcacagaggattcagctttctcaaacacaat 13325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 28649055 - 28648937
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| || |||||      
T  28649055 gcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattca 28648956  T
Q  163 cggaggattcaactttctc 181  Q
    | ||||||||| |||||||    
T  28648955 cagaggattcagctttctc 28648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 28960120 - 28960226
Alignment:
Q  52 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 151  Q
    |||| ||||| |||||||||||| | ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  28960120 cattgataggtgcaacagtagccgttgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 28960219  T
Q  152 tgatgca 158  Q
     ||||||    
T  28960220 cgatgca 28960226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 29967387 - 29967517
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  29967387 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 29967486  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  29967487 tcgacgcattcacagaggattcagctttctc 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 30029256 - 30029126
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  30029256 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 30029157  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  30029156 tcgacgcattcacagaggattcagctttctc 30029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 11325686 - 11325634
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  11325686 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 11325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 13184918 - 13184970
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13184918 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 13440764 - 13440816
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13440764 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13440816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 33877139 - 33877087
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  33877139 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16283331 - 16283091
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  16283331 aaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacac 16283232  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||||||||||||||| || ||||||    
T  16283231 catccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttctcgaatacaatgattccttct 16283132  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||  |||||||| |||||||| |||||| || |||||||    
T  16283131 ctgacggcttcttccagacgagttcccatggtgaccatctc 16283091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22081205 - 22081446
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||   ||| | |||| ||||  || ||| |||||||| || ||||||||||||||||||||||||| || ||||||||||||    
T  22081205 aaggatgctgagagtattgcatgtactgatacggcggaggtagctgagcagcattgatgggggcaacagtagccatggattgactggttccggcagatac 22081304  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||| |||||||||||||||||||| || || ||| || ||||||||||||| |||||||||  ||| || || ||||||||||| |||    
T  22081305 catccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgcagaggattcacatttttcaaacacaataatgccatct 22081404  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||| |||||||  || || |||||| || ||||||||    
T  22081405 ctgacagcctcttctaagcgggttcccatggtgaccatctca 22081446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 19687936 - 19687740
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  19687936 tgggcagcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 19687837  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| ||||| || |||||| || |||||||    
T  19687836 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgggttcccatggtgaccatctc 19687740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 16277392 - 16277196
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  16277392 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 16277293  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  16277292 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 16277196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 14557465 - 14557269
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  14557465 tgggctgcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14557366  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  14557365 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 14557269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 2137636 - 2137832
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2137636 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2137735  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || | ||| ||||  ||||| || ||||| || |||||| || |||||||    
T  2137736 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattcattccctgacggcttcctccagacgggttcccatggtgaccatctc 2137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 27609282 - 27609478
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  27609282 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 27609381  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||  |||||||||| ||||| || || || ||||  ||||| || |||||||| |||||| || |||||||    
T  27609382 acctctttgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcctccagacgagttcccatggtgaccatctc 27609478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 18710418 - 18710228
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  18710418 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 18710319  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18710318 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18710228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 19674270 - 19674080
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||||||||||| |||||| || || |||||||| || || |||||||||||||| ||||| || ||||| |||||||    
T  19674270 gcattgataggagcaacggtagccatggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctct 19674171  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || ||| | || || |||||| |||||||||| |||||||| || || ||||  ||||| || ||||| || |||||| || |||||||    
T  19674170 tcgacgcactcgcagaagattcagctttctcgaacacaataattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 19674080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 31490133 - 31490263
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31490133 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 31490232  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  31490233 tcgacgcattcacagaggattcagctttctc 31490263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 31354362 - 31354250
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||| || |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |    
T  31354362 tgggctgcattgataggagcaacggtggccatggattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 31354263  T
Q  145 acctctttgatgc 157  Q
    ||||||| |||||    
T  31354262 acctcttcgatgc 31354250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 19208743 - 19208850
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||| |||    
T  19208743 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttct 19208842  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  19208843 tcgatgca 19208850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 19286297 - 19286158
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19286297 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19286198  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  19286197 tcgacgcactcgcagaagattcagctttctcaaacacaat 19286158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 28362350 - 28362477
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  28362350 gcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 28362449  T
Q  163 cggaggattcaactttctcgaatacaat 190  Q
    | ||||||||| ||||||| || |||||    
T  28362450 cagaggattcagctttctcaaacacaat 28362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 3329902 - 3330080
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||  |||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3329902 gcattgataggagcaacgatagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3330001  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || |||||||| |||||    
T  3330002 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgagttcccat 3330080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 29829145 - 29828967
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29829145 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29829046  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  29829045 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatctctgacggcttcctcaagacgggttcccat 29828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 19518526 - 19518665
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19518526 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19518625  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  19518626 tcgacgcattcacagaggattcagctttctcaaacacaat 19518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 33258555 - 33258425
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33258555 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctct 33258456  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  33258455 tcgacgcattcacagaggattcagctttctc 33258425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 12093116 - 12093306
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||| ||||||||| ||||| |||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  12093116 gcattgataggagcaatagtagccatagattggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 12093215  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  12093216 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 12093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44562986 - 44562932
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  44562986 aaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 44562932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 19659371 - 19659423
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  19659371 ggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 19659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 9354505 - 9354453
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  9354505 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 9354453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 29645 - 29405
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| | ||  |||||||||||||||| |||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  29645 aaggatgctgagaatacggcgcatacgggtacgatggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacac 29546  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    |||||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || |||||     
T  29545 catccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttcc 29446  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||  |||||||| |||||||| |||||| || |||||||    
T  29445 ctgacggcttcttccagacgagttcccatggtgaccatctc 29405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 40487 - 40683
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  40487 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 40586  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  40587 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 40683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 47403 - 47599
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||| | |||||||||||||||| |||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  47403 tgggctgcattgataagagcaacagtagccatgggttgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 47502  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  47503 acctctttgatgcattcacggaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 47599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 21449 - 21208
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagatac 100  Q
    ||||||||||| ||||||||   ||| |||||| ||||  || ||| | |||||| || |||||||||||||||| |||||||| || ||||||||||||    
T  21449 aaggatgctgagagtattgcatgtactggtacggcggaggtagctgagaagcattgatgggggcaacagtagccacggattgactggttccggcagatac 21350  T
Q  101 catccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttct 200  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||||| ||||||| || |||||||| || |||    
T  21349 catccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcatttgcagaggattcacctttctcaaacacaataattccgtct 21250  T
Q  201 ctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| ||| |||||||  || || |||||| || ||||||||    
T  21249 ctgacagcctcttctaagcgggttcccatggtgaccatctca 21208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 27130 - 26934
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  27130 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 27031  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  27030 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 26934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 13299312 - 13299508
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  13299312 tgggctgcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 13299411  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  13299412 atctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 13299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 22935238 - 22935434
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  22935238 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 22935337  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  22935338 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 22935434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 23857683 - 23857879
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  23857683 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 23857782  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  23857783 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 23857879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 24863552 - 24863356
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24863552 tgggctgcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24863453  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| | |||| || |||||||    
T  24863452 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttctcatggtgaccatctc 24863356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 50 - 242
Target Start/End: Complemental strand, 20160534 - 20160345
Alignment:
Q  50 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 149  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  20160534 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 20160438  T
Q  150 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||| || ||||||||    
T  20160437 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccatggtgaccatctca 20160345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 50 - 242
Target Start/End: Original strand, 22172297 - 22172486
Alignment:
Q  50 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 149  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  22172297 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 22172393  T
Q  150 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 242  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||| || ||||||||    
T  22172394 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccatggtgaccatctca 22172486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 15424678 - 15424874
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  15424678 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 15424777  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | || |||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  15424778 acctctttgatgcattcacagaagattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 15424874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 26988836 - 26988640
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26988836 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26988737  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  26988736 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 26988640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 26999908 - 26999712
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26999908 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26999809  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  26999808 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 26999712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 24304979 - 24305124
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24304979 tgggcagcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24305078  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  24305079 acctctttgatgcattcacagaggattcagctttctcgaacacaat 24305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 26918209 - 26918070
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  26918209 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 26918110  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  26918109 tcgatgcattcacagaggattcagctttctcgaacacaat 26918070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 16749677 - 16749493
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  16749677 ataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 16749578  T
Q  157 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    || |  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16749577 cactcacagaggattcagctttctcgaacacaatgatcccatccctgacggcttcctccagacgggttcccatggtgaccatctc 16749493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 29549307 - 29549117
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| ||||| || ||||| |||||||    
T  29549307 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctct 29549208  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  29549207 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 29549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 27044225 - 27044029
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  27044225 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 27044126  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||| |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  27044125 atctcttcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 27044029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 3695892 - 3695702
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3695892 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3695793  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  3695792 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 3695702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22477592 - 22477673
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgac 84  Q
    ||||||||| |||| |||||||||||||||||| ||  ||| |||||||||||||| |||||||||||||||||||||||||    
T  22477592 ggatgctgagagtactgcgcatacgggtacgacagaggtaattgggcagcattaattggggcaacagtagccatggattgac 22477673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 17025097 - 17024901
Alignment:
Q  45 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 144  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |    
T  17025097 tgggctgcattgataggagcaacagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccat 17024998  T
Q  145 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    ||||||| ||||||||  | ||||||||  ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17024997 acctcttcgatgcattcacagaggattcggctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17024901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 4525118 - 4525011
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4525118 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4525019  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  4525018 tcgatgca 4525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 4757590 - 4757483
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4757590 gcattgataggagcgacagtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4757491  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  4757490 tcgatgca 4757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 4772826 - 4772687
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  4772826 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 4772727  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  4772726 tcgatgcactcacagaggattcagctttctcaaacacaat 4772687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 27007541 - 27007402
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27007541 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27007442  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27007441 tcgatgcactcacagaggattcagctttctcaaacacaat 27007402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 27484946 - 27484807
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  27484946 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 27484847  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27484846 tcgatgcactcacagaggattcagctttctcaaacacaat 27484807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 29572842 - 29572735
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  29572842 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 29572743  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  29572742 tcgatgca 29572735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 29501235 - 29501096
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29501235 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29501136  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  |  |||||||| ||||||| || |||||    
T  29501135 tcgacgcattcacaaaggattcagctttctcaaacacaat 29501096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 30558395 - 30558490
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 158  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  30558395 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 30558490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 34463728 - 34463867
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  34463728 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 34463827  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  34463828 tcgacgcattcacagaggattcagctttctcaaacacaat 34463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 4546151 - 4546341
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  4546151 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 4546250  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  4546251 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 4546341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 16944394 - 16944524
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16944394 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 16944493  T
Q  151 ttgatgcatttgcggaggattcaactttctc 181  Q
    | || |||||  | ||||||||| |||||||    
T  16944494 tcgacgcattcacagaggattcagctttctc 16944524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 28207271 - 28207081
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  28207271 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 28207172  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  28207171 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 28207081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 26778000 - 26778100
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  26778000 ataggtgcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 26778099  T
Q  157 c 157  Q
    |    
T  26778100 c 26778100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 27360377 - 27360484
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27360377 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27360476  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  27360477 tcgatgca 27360484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 27450720 - 27450827
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27450720 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27450819  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  27450820 tcgatgca 27450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 16673956 - 16673817
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  16673956 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 16673857  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  16673856 tcgacgcattcacagaggattcagctttctcaaacacaat 16673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 4724510 - 4724688
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| ||||| |    
T  4724510 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttt 4724609  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  4724610 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 4724688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 26116792 - 26116893
Alignment:
Q  57 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 156  Q
    ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| ||||    
T  26116792 ataggagcaacggtagctatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatg 26116891  T
Q  157 ca 158  Q
    ||    
T  26116892 ca 26116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28162539 - 28162485
Alignment:
Q  1 aaggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||||| |||||||||||||||||||||| |||  || ||| ||||||||    
T  28162539 aaggatgctgagagtattgcgcatacgggtacgatggaggtagctgagcagcatt 28162485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 27272947 - 27273128
Alignment:
Q  48 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 147  Q
    |||||||||| |||||| ||||||||  | |  ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||    
T  27272947 gcagcattaacaggggcgacagtagctgtagtctgacctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacc 27273046  T
Q  148 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
    ||||  |  ||||||  || || ||| | ||||| |||||||| || ||||| ||||  ||||| |||||||||||||||||    
T  27273047 tcttcaacccatttgtagaagactcacccttctcaaatacaatgataccttccctgacggcttcctctagacgagtccccat 27273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 27630077 - 27630254
Alignment:
Q  52 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 151  Q
    |||||| |||||| ||||||||| | || ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||||||    
T  27630077 cattaacaggggcgacagtagccgtagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 27630176  T
Q  152 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 229  Q
     ||  || |||  || || ||| | ||||| |||||||| || || |||||||  || || |||||||||||||||||    
T  27630177 cgacccacttgtagaagactcacccttctcaaatacaatgataccctctctgacggcctcctctagacgagtccccat 27630254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8892626 - 8892678
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  8892626 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 8892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 13522389 - 13522441
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  13522389 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13522441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 33374572 - 33374624
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||| ||||||||    
T  33374572 ggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33374624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 554 - 744
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |  || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  554 gcattgataggagcaacagtagccatggattgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 653  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  654 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 8064 - 7874
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8064 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7965  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  7964 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 7874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 241
Target Start/End: Original strand, 48568 - 48769
Alignment:
Q  47 ggcagcattaataggggcaacag-tagccatggattga--ccggctccggca-gataccatccc-tacttctgtttctttcttcttatgatgacc-gtta 140  Q
    ||||||||| ||||| ||||||| |||||||||||||   |||||||||||| || |||||||| |||||| |||||||||||||| || || || ||||    
T  48568 ggcagcattgataggagcaacaggtagccatggattggacccggctccggcaagacaccatcccctacttccgtttctttcttcttgtggtgtcccgtta 48667  T
Q  141 ccgtacctcttt-gatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatc 239  Q
    || ||||||||| ||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||    
T  48668 ccatacctcttttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatc 48767  T
Q  240 tc 241  Q
    ||    
T  48768 tc 48769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 241
Target Start/End: Original strand, 26626 - 26816
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26626 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26725  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  26726 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 26816  T

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Target: scaffold0350 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 7663 - 7770
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  7663 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 7762  T
Q  151 ttgatgca 158  Q
    | ||||||    
T  7763 tcgatgca 7770  T

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Target: scaffold0237 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 15366 - 15544
Alignment:
Q  63 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 162  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  15366 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 15465  T
Q  163 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  15466 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 15544  T

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Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 7769 - 7579
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  7769 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 7670  T
Q  151 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 241  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  7669 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 7579  T

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Target: scaffold0159 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 9490 - 9593
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 150  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9490 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9589  T
Q  151 ttga 154  Q
    ||||    
T  9590 ttga 9593  T

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Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 5821 - 5682
Alignment:
Q  51 gcattaataggggcaacagtagccatg-gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 149  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || |||    
T  5821 gcattgataggagcaacagtagccatttgattgaccggctccagctgacaccatccc-acttccgtttctttcttcttgtggtgtccattaccatatctc 5723  T
Q  150 tttgatgcatttgcggaggattcaactttctcgaatacaat 190  Q
    || || |||||  | ||||||||| ||||||| || |||||    
T  5722 ttcgacgcattcacagaggattcagctttctcaaacacaat 5682  T

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Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 157 - 197
Alignment:
Q  51 gcattaataggggcaacagtagccatggattgaccggctcc 91  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  157 gcattgataggtgcaacagtagccattgattgaccggctcc 197  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3031 - 3083
Alignment:
Q  3 ggatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 55  Q
    ||||||||| |||||||||| |||||||||||||||  || ||| ||||||||    
T  3031 ggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 3083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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