View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_37 (Length: 427)
Name: NF10145A_low_37
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_37 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 21 - 427
Target Start/End: Complemental strand, 15961848 - 15961442
Alignment:
| Q |
21 |
atcattgcagctcttatatgatgaacaagttgccgttgcaaaatataactagcaaatacaactgaagagagaaattaaaaaagtggacattaaactatat |
120 |
Q |
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| T |
15961848 |
atcattgcagctcttatatgatgaacaagttgccgttgcaaactaaaactagcaaatacaactgaagagagaaaataaaaaagtggacattaaactatat |
15961749 |
T |
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| Q |
121 |
atttcatatataaataatgattgaggtatgtatattataatgcaaattggtcatttctttctcaaccatcataattcaatgctctttcatgatgatcaat |
220 |
Q |
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| T |
15961748 |
atttcatatataaataatgattgaggtatgtatattataatgcaaattggtcatttctttctcaaccatcataattcaatgctcttacatgatgatcaat |
15961649 |
T |
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| Q |
221 |
cttctcttgtcaaactaatactagtttggccaaagagaaaaataatagtaagatgggagaaaaatcctcatctaacggagcaccaagcaatacacttctg |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15961648 |
cttctcttgtcaaactaatactagtttggccaaagagaaaaataatagtaagatgggagaaaaatcctcatctaacggagcaccaagcaatacacttctg |
15961549 |
T |
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| Q |
321 |
aacaaaccattaaagaaacaagctaaaacaaaacaaggcaagtgcataagcaaaagaaaatttaaatgcctcatgtctgccacttaaaattcaagaactt |
420 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15961548 |
aacaaaccattaaagaaataagctaaaacaaaacaaggcaagtgcataagcaaaagaaaatttaaatgcctcatgtctgccacttaaaattcaagaactt |
15961449 |
T |
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| Q |
421 |
aatttga |
427 |
Q |
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| T |
15961448 |
aatttga |
15961442 |
T |
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