View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_389 (Length: 250)

Name: NF10145A_low_389
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_389
NF10145A_low_389
[»] chr1 (34 HSPs)
chr1 (1-220)||(23378465-23378683)
chr1 (48-219)||(23591698-23591867)
chr1 (48-219)||(1502729-1502897)
chr1 (48-219)||(38812740-38812909)
chr1 (48-219)||(13321876-13322045)
chr1 (48-219)||(30171879-30172048)
chr1 (48-219)||(30187420-30187589)
chr1 (48-219)||(23576423-23576591)
chr1 (48-217)||(6754474-6754640)
chr1 (55-203)||(36490795-36490941)
chr1 (48-217)||(41624832-41624998)
chr1 (48-219)||(6180186-6180355)
chr1 (48-219)||(39150336-39150504)
chr1 (71-219)||(39627603-39627749)
chr1 (48-219)||(35512725-35512894)
chr1 (64-208)||(47355403-47355544)
chr1 (53-219)||(7824872-7825036)
chr1 (48-219)||(22167335-22167504)
chr1 (64-208)||(7520022-7520164)
chr1 (48-165)||(52337821-52337935)
chr1 (48-219)||(17919454-17919622)
chr1 (130-218)||(5857990-5858079)
chr1 (149-222)||(29924356-29924429)
chr1 (48-99)||(25465276-25465327)
chr1 (107-219)||(34050351-34050461)
chr1 (153-219)||(44918025-44918091)
chr1 (108-219)||(3121119-3121227)
chr1 (153-218)||(8062206-8062271)
chr1 (102-157)||(33048175-33048227)
chr1 (130-187)||(35941110-35941167)
chr1 (134-211)||(43317498-43317575)
chr1 (110-207)||(50079870-50079966)
chr1 (154-219)||(51382372-51382437)
chr1 (102-203)||(25956665-25956764)
[»] chr4 (41 HSPs)
chr4 (56-219)||(2096871-2097032)
chr4 (48-219)||(24684836-24685006)
chr4 (48-219)||(9759151-9759319)
chr4 (50-219)||(19468194-19468361)
chr4 (50-217)||(19450911-19451076)
chr4 (48-219)||(16667393-16667562)
chr4 (55-219)||(50352303-50352464)
chr4 (48-219)||(17409824-17409993)
chr4 (48-217)||(49181074-49181241)
chr4 (111-219)||(7349689-7349794)
chr4 (135-205)||(10813587-10813658)
chr4 (50-219)||(40049559-40049725)
chr4 (56-219)||(8736828-8736988)
chr4 (48-219)||(23545476-23545645)
chr4 (48-219)||(27019260-27019429)
chr4 (48-219)||(34941278-34941447)
chr4 (56-182)||(37784877-37785001)
chr4 (110-219)||(6875501-6875608)
chr4 (103-219)||(25843291-25843406)
chr4 (48-204)||(27362406-27362560)
chr4 (56-219)||(52391298-52391459)
chr4 (48-219)||(54495646-54495815)
chr4 (154-219)||(10389380-10389445)
chr4 (104-218)||(33632267-33632379)
chr4 (151-208)||(40681960-40682017)
chr4 (154-219)||(49228357-49228422)
chr4 (57-163)||(1378075-1378178)
chr4 (104-218)||(19838756-19838866)
chr4 (56-206)||(39876844-39876991)
chr4 (156-219)||(45742368-45742431)
chr4 (55-163)||(55813920-55814026)
chr4 (104-195)||(13009820-13009909)
chr4 (48-219)||(47326901-47327070)
chr4 (48-219)||(47341697-47341866)
chr4 (130-219)||(49332333-49332423)
chr4 (142-219)||(10658544-10658621)
chr4 (142-219)||(10872689-10872766)
chr4 (56-218)||(51691343-51691502)
chr4 (152-219)||(3728249-3728317)
chr4 (48-124)||(18882276-18882352)
chr4 (109-166)||(35645071-35645126)
[»] chr7 (26 HSPs)
chr7 (109-219)||(42750289-42750396)
chr7 (48-218)||(47457470-47457638)
chr7 (48-220)||(26300572-26300740)
chr7 (48-219)||(24462964-24463132)
chr7 (48-219)||(33342989-33343157)
chr7 (48-217)||(7170005-7170171)
chr7 (48-212)||(25709408-25709570)
chr7 (48-219)||(46290011-46290179)
chr7 (48-219)||(4969773-4969942)
chr7 (48-219)||(19889341-19889509)
chr7 (110-219)||(19868114-19868221)
chr7 (48-219)||(34270266-34270430)
chr7 (48-219)||(9331962-9332130)
chr7 (48-219)||(23982764-23982933)
chr7 (48-126)||(33072072-33072150)
chr7 (48-218)||(36548469-36548636)
chr7 (66-219)||(47707911-47708065)
chr7 (102-192)||(3530177-3530264)
chr7 (48-192)||(8091321-8091463)
chr7 (48-94)||(26050470-26050516)
chr7 (48-94)||(26059829-26059875)
chr7 (48-126)||(29398143-29398221)
chr7 (1-38)||(19017888-19017925)
chr7 (154-219)||(24250314-24250379)
chr7 (154-219)||(29398227-29398292)
chr7 (130-209)||(12650831-12650911)
[»] chr8 (45 HSPs)
chr8 (48-219)||(26682068-26682237)
chr8 (48-219)||(6818017-6818186)
chr8 (48-219)||(31812113-31812282)
chr8 (48-219)||(3306064-3306232)
chr8 (48-219)||(20514632-20514802)
chr8 (48-219)||(2161388-2161556)
chr8 (154-219)||(7750668-7750733)
chr8 (55-219)||(12131983-12132145)
chr8 (48-219)||(9580118-9580287)
chr8 (112-219)||(14816198-14816303)
chr8 (112-219)||(14829437-14829542)
chr8 (104-219)||(38843704-38843817)
chr8 (154-219)||(11923015-11923080)
chr8 (154-219)||(38527821-38527886)
chr8 (48-183)||(39024866-39024998)
chr8 (48-219)||(12189597-12189766)
chr8 (48-219)||(12434025-12434194)
chr8 (104-190)||(34741730-34741813)
chr8 (133-219)||(8284660-8284747)
chr8 (55-219)||(45005970-45006131)
chr8 (134-211)||(5298077-5298157)
chr8 (48-219)||(13327950-13328118)
chr8 (112-219)||(35678347-35678452)
chr8 (48-219)||(36967079-36967248)
chr8 (154-219)||(7140571-7140636)
chr8 (154-219)||(9824959-9825024)
chr8 (105-199)||(16445801-16445893)
chr8 (154-219)||(40210933-40210998)
chr8 (158-218)||(11947016-11947076)
chr8 (111-219)||(9743862-9743967)
chr8 (104-212)||(10974619-10974725)
chr8 (48-217)||(28014867-28015032)
chr8 (48-126)||(2083078-2083156)
chr8 (173-219)||(11117129-11117175)
chr8 (48-219)||(26834561-26834730)
chr8 (108-219)||(32186186-32186295)
chr8 (171-221)||(37523756-37523806)
chr8 (177-219)||(38213081-38213123)
chr8 (134-192)||(44091346-44091404)
chr8 (154-219)||(10129104-10129169)
chr8 (154-219)||(12346006-12346071)
chr8 (135-192)||(45516316-45516373)
chr8 (51-211)||(1844572-1844731)
chr8 (134-217)||(35583368-35583453)
chr8 (154-218)||(40568314-40568378)
[»] chr2 (32 HSPs)
chr2 (49-219)||(15411632-15411800)
chr2 (48-219)||(9747317-9747486)
chr2 (55-219)||(5583574-5583735)
chr2 (48-219)||(14377425-14377593)
chr2 (134-219)||(12438740-12438825)
chr2 (48-210)||(45062207-45062367)
chr2 (48-219)||(23932565-23932734)
chr2 (48-219)||(27665053-27665221)
chr2 (56-219)||(43806360-43806521)
chr2 (48-182)||(24729586-24729718)
chr2 (55-219)||(34213965-34214129)
chr2 (111-219)||(34817544-34817649)
chr2 (130-219)||(39367059-39367149)
chr2 (48-219)||(7757795-7757963)
chr2 (154-219)||(12016667-12016732)
chr2 (64-166)||(2579983-2580082)
chr2 (154-218)||(7720116-7720180)
chr2 (48-124)||(26003355-26003431)
chr2 (110-194)||(2051639-2051721)
chr2 (133-219)||(43388857-43388944)
chr2 (48-219)||(19228426-19228594)
chr2 (104-219)||(36612796-36612909)
chr2 (104-219)||(36620647-36620760)
chr2 (169-219)||(36909503-36909553)
chr2 (153-219)||(39904159-39904225)
chr2 (154-219)||(4579901-4579966)
chr2 (162-219)||(16754971-16755028)
chr2 (154-219)||(16919266-16919331)
chr2 (154-219)||(22705455-22705520)
chr2 (162-219)||(26003612-26003669)
chr2 (128-211)||(25998088-25998172)
chr2 (49-219)||(26229864-26230030)
[»] chr6 (18 HSPs)
chr6 (48-219)||(6016856-6017025)
chr6 (66-219)||(30623326-30623477)
chr6 (56-219)||(8977483-8977644)
chr6 (48-219)||(34692354-34692523)
chr6 (48-219)||(14228135-14228303)
chr6 (48-219)||(28943778-28943946)
chr6 (112-202)||(29730295-29730383)
chr6 (48-217)||(10887031-10887198)
chr6 (50-219)||(33017725-33017891)
chr6 (64-219)||(1017803-1017956)
chr6 (48-219)||(29863311-29863480)
chr6 (154-219)||(1814894-1814959)
chr6 (154-219)||(3485711-3485776)
chr6 (48-219)||(17552596-17552764)
chr6 (154-219)||(24979262-24979327)
chr6 (162-217)||(17596315-17596370)
chr6 (48-219)||(18332697-18332866)
chr6 (154-219)||(5363005-5363070)
[»] chr5 (24 HSPs)
chr5 (48-219)||(30839782-30839950)
chr5 (48-219)||(36597580-36597748)
chr5 (48-217)||(8103589-8103755)
chr5 (55-219)||(18841721-18841883)
chr5 (48-219)||(3398220-3398389)
chr5 (48-219)||(40512952-40513120)
chr5 (112-219)||(5958196-5958301)
chr5 (48-219)||(11636732-11636900)
chr5 (48-157)||(15240959-15241065)
chr5 (130-211)||(10665053-10665134)
chr5 (162-219)||(11360186-11360243)
chr5 (175-219)||(11250090-11250134)
chr5 (111-208)||(28629890-28629984)
chr5 (175-219)||(33072677-33072721)
chr5 (48-219)||(2795524-2795692)
chr5 (153-207)||(11375972-11376026)
chr5 (64-126)||(15820317-15820379)
chr5 (50-140)||(23995427-23995516)
chr5 (55-125)||(31567507-31567577)
chr5 (153-219)||(34578012-34578078)
chr5 (109-192)||(40309497-40309580)
chr5 (154-219)||(24014800-24014865)
chr5 (48-166)||(6863610-6863725)
chr5 (48-124)||(7162934-7163010)
[»] chr3 (31 HSPs)
chr3 (48-219)||(2571269-2571437)
chr3 (48-219)||(10307767-10307935)
chr3 (50-219)||(54527717-54527884)
chr3 (48-219)||(38389447-38389616)
chr3 (48-219)||(50204403-50204572)
chr3 (111-220)||(20938056-20938162)
chr3 (48-217)||(46492352-46492519)
chr3 (48-219)||(51618050-51618216)
chr3 (109-202)||(53794781-53794872)
chr3 (132-210)||(2379162-2379238)
chr3 (58-187)||(38786343-38786468)
chr3 (48-219)||(11610915-11611083)
chr3 (129-212)||(24569324-24569408)
chr3 (134-217)||(37444149-37444232)
chr3 (133-220)||(40330381-40330468)
chr3 (56-219)||(13495294-13495455)
chr3 (56-219)||(42180052-42180213)
chr3 (131-219)||(37055455-37055544)
chr3 (130-219)||(47386922-47387013)
chr3 (50-126)||(51401531-51401607)
chr3 (168-219)||(8497550-8497601)
chr3 (48-212)||(45983516-45983675)
chr3 (133-219)||(46845531-46845618)
chr3 (134-208)||(13879899-13879973)
chr3 (48-94)||(25633121-25633167)
chr3 (154-220)||(26200733-26200799)
chr3 (56-219)||(12515491-12515651)
chr3 (48-125)||(23523038-23523115)
chr3 (135-219)||(30214103-30214187)
chr3 (154-219)||(32321835-32321899)
chr3 (49-126)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (48-219)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (175-218)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (104-212)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (134-192)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (48-219)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (107-218)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (48-219)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (48-219)||(13086-13254)
[»] scaffold0305 (1 HSPs)
scaffold0305 (55-157)||(18012-18111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (175-219)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23378465 - 23378683
Alignment:
Q  1 agataattttatttgatgatgttttattgttggtataaagcctagactcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgc 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23378465 agataattttatttgatgatgttttattgttggtataa-gcctagactcatgtacaaatttgaacatgttaagaatttcaaaatagtaaatttgaattgc 23378563  T
Q  101 tatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378564 tatttgtacattttatattaaatatagtgtaactttttaacaaataattgttattttcaataaaaagttattaattttagttgttttaacatatgtaata 23378663  T
Q  201 ttgcacatgttaaacaaaca 220  Q
    ||||||||||||||||||||    
T  23378664 ttgcacatgttaaacaaaca 23378683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 23591867 - 23591698
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| ||  ||||   || |||| ||||  | ||||||||||| |||||||||||   ||||||||||| ||||||    
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatata---taactttttaataaataa 23591771  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | || |||||||||||||| ||| |||||||||||| |||||||| || ||| |||||||||||| ||||||    
T  23591770 ttattgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaac 23591698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 1502729 - 1502897
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||   |||||||||   ||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata---taactttttgttaaataa 1502825  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| ||||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  1502826 ttgttgttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 1502897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 38812909 - 38812740
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| |||||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  38812909 tcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 38812813  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| |  ||| |||||||||||||||||||    
T  38812812 ttgttgttttctaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaaacaaac 38812740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 13322045 - 13321876
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| | |||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || ||||||    
T  13322045 tcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatata---aaacttttgaaaaaataa 13321949  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  ||||||| ||||||||| || | |||||||||||||||| |  ||| |||||||||||| ||||||    
T  13321948 ttgttgtttttcaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttagacaaac 13321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 30172048 - 30171879
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30171952  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30171951 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 30187589 - 30187420
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30187493  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30187492 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 23576423 - 23576591
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatata---taactttttgttaaataa 23576519  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| || ||| ||||||||   ||||||| || ||||||||| |||||| ||||||    
T  23576520 ttgttggtttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaac 23576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 6754640 - 6754474
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 6754544  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  6754543 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 36490941 - 36490795
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 153  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||| ||||      
T  36490941 caaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatata---taactttttaataaataattgttgt 36490845  T
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattg 203  Q
    ||||||||||||| ||| || ||||| ||| |||||||| || |||||||    
T  36490844 ttttcaataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 41624998 - 41624832
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| | ||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 41624902  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     ||||  |||||||||||||||| || ||||||||| |||||||| || |||||||||||||||| ||||    
T  41624901 ttgttggtttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 6180355 - 6180186
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataa---aacttttaaataaataa 6180259  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | | |||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  6180258 ttataattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 6180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 39150336 - 39150504
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 39150431  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  39150432 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 39150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 39627603 - 39627749
Alignment:
Q  71 aagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagtt 169  Q
    ||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || || | | ||||  |||||||| |||||||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataagtgattgttgtttttcaattaaaagtt 39627699  T
Q  170 attaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
      || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  39627700 gctatttttagtttccttaacatgtgtaatattgcacatgttagacaaac 39627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 35512894 - 35512725
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataa---aacttttgaatatataa 35512798  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  35512797 atgttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 35512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 47355403 - 47355544
Alignment:
Q  64 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 163  Q
    |||||||||||| || |||||  |||||||| ||||  | |||| |||||||||||||  |||   || |||||| | || ||| |||| ||||||||||    
T  47355403 acatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgata---tacctttttgataagtaattgttgttttcaataa 47355499  T
Q  164 aaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    ||||||  || ||||||||| |||||||| || ||||||||||||    
T  47355500 aaagtttatacttttagttgctttaacatgtgcaatattgcacat 47355544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 219
Target Start/End: Original strand, 7824872 - 7825036
Alignment:
Q  53 tacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt 152  Q
    |||||||||| ||||||||| || || |||||   || |||| | ||  |||||||||||| ||||||||||||    ||||||| || |||||| |||     
T  7824872 tacaaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgtg 7824968  T
Q  153 attttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  7824969 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 7825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 22167504 - 22167335
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 146  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 22167409  T
Q  147 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| ||||||||| || ||||||    
T  22167408 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtagacaaac 22167335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 7520022 - 7520164
Alignment:
Q  64 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aata 162  Q
    |||||||||||| || |||||   || |||| ||||  ||||||||||||| |||| ||||||   |||| |||||| |||||| | |||||||  ||||    
T  7520022 acatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatata---taacattttaataaataagtattattttttaata 7520118  T
Q  163 aaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    |||| ||| || ||||||||| |||||||| || ||||||||||||    
T  7520119 aaaatttactacttttagttgctttaacatgtgcaatattgcacat 7520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 52337935 - 52337821
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    ||||| |||| ||||||||||||||||| || ||||| |||||| || ||||| | || |  |||||||||||||||||   ||| ||||||| ||||||    
T  52337935 tcatgaacaagtttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatata---taaatttttaataaataa 52337839  T
Q  148 ctgttattttcaataaaa 165  Q
     ||||||| | |||||||    
T  52337838 ttgttattattaataaaa 52337821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 17919622 - 17919454
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||  |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 17919527  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||||| ||||||    
T  17919526 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 17919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 5858079 - 5857990
Alignment:
Q  130 taactttttaacaaataactg-ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    ||||||||||| |||||| |  || |||| ||||||||||| ||| ||||| ||||||||| || |  ||||||||||||||||||||||    
T  5858079 taactttttaataaataattacttgtttttaataaaaagttgttacttttaattgttttaatatgtcaaatattgcacatgttaaacaaa 5857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 29924356 - 29924429
Alignment:
Q  149 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaaa 222  Q
    |||||||||||||||||| || ||| ||||||||| |||| ||| |||||  ||||| |||||| |||||||||    
T  29924356 tgttattttcaataaaaaattgttatttttagttgctttagcatgtgtaacgttgcatatgttagacaaacaaa 29924429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 25465327 - 25465276
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattg 99  Q
    |||||| |||||||| |||||||||||| |||||||| ||||||||| ||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattg 25465276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 34050351 - 34050461
Alignment:
Q  107 tacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgca 205  Q
    ||||||||||||| ||||||   ||| ||||| | |||||| |||| |||| |||||| || || ||| |||| |||| |||||||| || |||||||||    
T  34050351 tacattttatatttaatata---taattttttgataaataattgttgtttttcaataataatttgttacttttggttgctttaacatgtgcaatattgca 34050447  T
Q  206 catgttaaacaaac 219  Q
    ||||||| ||||||    
T  34050448 catgttagacaaac 34050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 44918091 - 44918025
Alignment:
Q  153 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  44918091 attttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 44918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 3121227 - 3121119
Alignment:
Q  108 acattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 207  Q
    ||||||| |||||||||||   |||||||||   |||||| ||||  |||||||||||| ||  || ||||| ||   ||||||||||||||||||||||    
T  3121227 acattttgtattaaatata---taactttttgttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatatgtaatattgcaca 3121131  T
Q  208 tgttaaacaaac 219  Q
    | ||| ||||||    
T  3121130 tattagacaaac 3121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 8062271 - 8062206
Alignment:
Q  153 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    ||||||||| |||||||| || ||||||||   ||||||| |  ||||||||||||||||||||||    
T  8062271 attttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 33048175 - 33048227
Alignment:
Q  102 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 157  Q
    ||||||| |||||||||||||||||   ||||||||||| |||||| |||||||||    
T  33048175 atttgtatattttatattaaatata---taactttttaataaataattgttatttt 33048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 35941110 - 35941167
Alignment:
Q  130 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgtttt 187  Q
    ||||||||||| |||||| |||| |||| |||||||||||| || |||||||| ||||    
T  35941110 taactttttaataaataaatgttgtttttaataaaaagttaatacttttagttctttt 35941167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 43317575 - 43317498
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 211  Q
    ||||||| |||| | |||| ||||||| ||| ||||| || ||||||||| |||||||| |  |||||||||||||||    
T  43317575 tttttaataaatgattgttgttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgtt 43317498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 50079966 - 50079870
Alignment:
Q  110 attttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 207  Q
    |||||||||||||||   | ||| ||||||| |||||| |  | |||| |||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  50079966 attttatattaaataatatataattttttaataaataattaatttttttaataaaaagttacta-ttttaattgctttaacatatataatattgcaca 50079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 51382437 - 51382372
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  51382437 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 51382372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 25956764 - 25956665
Alignment:
Q  102 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaata 200  Q
    |||| ||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||||||||||| | ||||||||||||| || || ||||    
T  25956764 atttatacatttaatattaaatataa---aacttttaaataaataattgttgtttttcaagaaaaagttattattattagttgttttaatatgtgcaata 25956668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 2097032 - 2096871
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 154  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||||  | |||| ||||||||||||||||||   ||||||||||| |||||| ||||  |    
T  2097032 aaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatata---taactttttaataaataattgttgtt 2096936  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||| | | ||||||||| |||||| | || |||||||||||||||| ||||||    
T  2096935 tttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgttagacaaac 2096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 24685006 - 24684836
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataa---aacttttgaataaataa 24684910  T
Q  148 ctgttattttc--aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||||  || ||||||||| || | |||||||||||||||| |||||| ||||| |||||||||||||    
T  24684909 ttgttgttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgttaaacaaac 24684836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 9759151 - 9759319
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    ||||||||||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatata---taactttttgttaaataa 9759247  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9759248 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 19468361 - 19468194
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 149  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataatt 19468265  T
Q  150 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  19468264 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 19468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 217
Target Start/End: Original strand, 19450911 - 19451076
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 149  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataatt 19451007  T
Q  150 gttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
    ||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||    
T  19451008 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaa 19451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 16667393 - 16667562
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || |||||| ||| ||| | |||  | ||||  ||||||||||||||||   ||| |||||||| ||||||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatat---gtagctttttaataaataa 16667489  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| |||| |||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  16667490 gtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 16667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 50352464 - 50352303
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 154  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  50352464 caaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 50352368  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  50352367 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 50352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 17409993 - 17409824
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 146  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 17409898  T
Q  147 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  17409897 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 17409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 49181241 - 49181074
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| |    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatga 49181145  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     ||||  |||||||| ||| |||  || ||||||||   ||||||| || |||||||||||| ||| ||||    
T  49181144 ttgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 7349794 - 7349689
Alignment:
Q  111 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 209  Q
    |||||||||||||||   ||||||||| ||||||||| ||||  |||||||| ||||||||||| |||||||||  ||||||| || |||||||||| ||    
T  7349794 ttttatattaaatat---gtaactttt-aacaaataattgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtg 7349699  T
Q  210 ttaaacaaac 219  Q
    ||| ||||||    
T  7349698 ttagacaaac 7349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 10813587 - 10813658
Alignment:
Q  135 ttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 205  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  10813587 ttttaacaaataattgttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 40049725 - 40049559
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 149  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||  ||||||| |||||||||||   ||| |||||   |||||| |    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatata---taattttttgttaaataatt 40049629  T
Q  150 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||  |||| ||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  40049628 gttggtttctataaaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 40049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 8736828 - 8736988
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 155  Q
    ||||||| |||||||||||| || ||| |||||| ||||| |||  | | || ||||| |||||||||||   |||||||||||| |||||| | || ||    
T  8736828 aaatttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatat---gtaactttttaataaataagttttgtt 8736923  T
Q  156 tt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    || ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  8736924 tttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 8736988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 23545645 - 23545476
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||||||| || || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  23545645 tcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataa---aacttttgaataaataa 23545549  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||| ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  23545548 ttgttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 23545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 27019429 - 27019260
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| | ||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  27019429 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 27019333  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||||||| |||| ||||||    
T  27019332 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttagacaaac 27019260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 34941447 - 34941278
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| | |||||| ||||| |||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||     
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatata---taactttttaataaatag 34941351  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| |||||||||||| ||| ||||||||   |||| || || |||||| ||||||||| ||||||    
T  34941350 ttgttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaac 34941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 37784877 - 37785001
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 154  Q
    ||||||| |||||||||||| |||||||| ||||||||  ||||  |||||| |||||||| |||||||   ||||||||||||| |||| | | ||  |    
T  37784877 aaatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaata---tgtaactttttaataaatgattattgtt 37784973  T
Q  155 tttcaataaaaagttattaattttagtt 182  Q
    |||||||||||||||  || ||||||||    
T  37784974 tttcaataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 6875608 - 6875501
Alignment:
Q  110 attttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    |||||||||||||| ||   |||||||| || |||||| || ||||||| |||||||  ||| || |||||||||||||||||| || ||||||||| ||    
T  6875608 attttatattaaattta---taacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaat 6875512  T
Q  209 gttaaacaaac 219  Q
    |||| ||||||    
T  6875511 gttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 25843406 - 25843291
Alignment:
Q  103 tttgtacattttatattaaatatagtgtaa-ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaata 200  Q
    ||||| ||||||||||||||||||   ||| |||||||||||||   ||||  ||||||||||||||||| || ||||||||| |||||||| | | |||    
T  25843406 tttgtgcattttatattaaatata---taagctttttaacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatgtattata 25843310  T
Q  201 ttgcacatgttaaacaaac 219  Q
    ||| |||||||| ||||||    
T  25843309 ttgtacatgttagacaaac 25843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 27362560 - 27362406
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  |||||| ||||| ||||||||||   |||| |||||| | ||||||    
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaata---tgtagctttttgataaataa 27362464  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgc 204  Q
     | ||  ||||||||||||| ||| || |||||| | | |||||||||| ||| ||||    
T  27362463 gttttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgttgc 27362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 52391459 - 52391298
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 154  Q
    ||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| ||||  |    
T  52391459 aaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataattgttgtt 52391363  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| ||||||||| || | |||||| ||||||||| || || ||| ||||| ||| ||||||    
T  52391362 tttcaaaaaaaagttactactattagttattttaacatgtgcaacattacacatattagacaaac 52391298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 54495646 - 54495815
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||| | |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 54495742  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  ||||||| ||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  54495743 gttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 54495815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 10389380 - 10389445
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||  | |||||| ||||||||||||||||||| ||||||    
T  10389380 ttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaac 10389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 33632267 - 33632379
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| ||||||||| || | ||||||||||| |||| | |||| ||    
T  33632267 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgtt 33632363  T
Q  203 gcacatgttaaacaaa 218  Q
    |||||||||| |||||    
T  33632364 gcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 40682017 - 40681960
Alignment:
Q  151 ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    |||||||||||||||| ||| || |||||||||  |||||||||| ||||||||||||    
T  40682017 ttattttcaataaaaaattactatttttagttgacttaacatatgcaatattgcacat 40681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 49228422 - 49228357
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  49228422 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 49228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 1378178 - 1378075
Alignment:
Q  57 aatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattt 156  Q
    |||||| |||||||||||| || ||||||||||||||   |||  | |||||||||| ||||||||||||   |||| |||||| |||||| || | |||    
T  1378178 aatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatata---taacattttaataaataattgatgttt 1378082  T
Q  157 tcaataa 163  Q
    |||||||    
T  1378081 tcaataa 1378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 19838756 - 19838866
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattg 203  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||  || |||||||||||| | |||||||||||||||| || ||| ||     
T  19838756 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttaaaa-aaaaagttattactattagttgttttaacatgtgcaatgttc 19838851  T
Q  204 cacatgttaaacaaa 218  Q
    ||||||||| |||||    
T  19838852 cacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 39876991 - 39876844
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 155  Q
    ||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   |||||| ||||  |    
T  39876991 aaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatata---taactttttgttaaataattgttggt 39876895  T
Q  156 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcac 206  Q
    ||||||||||| ||| || ||||||||   ||||||| || ||||||||||    
T  39876894 ttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 45742431 - 45742368
Alignment:
Q  156 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45742431 ttcaagaaaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 55814026 - 55813920
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 153  Q
    |||||||| ||||||||| || || |||||  ||| |||| ||||  ||||||||||| | |||||||||||   ||||||||||| |||||| |||| |    
T  55814026 caaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatata---taactttttaataaataattgttga 55813930  T
Q  154 ttttcaataa 163  Q
    ||||||||||    
T  55813929 ttttcaataa 55813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 13009820 - 13009909
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatg 195  Q
    ||||| ||||| |||||||||||   || |||||||  |||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13009820 ttgtatattttgtattaaatata---tagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatg 13009909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 47326901 - 47327070
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47326997  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47326998 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 47341697 - 47341866
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47341793  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47341794 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 49332423 - 49332333
Alignment:
Q  130 taactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||| |||||| |  |||||| |||| ||||||||||| ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  49332423 taactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaac 49332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 10658544 - 10658621
Alignment:
Q  142 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10658544 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 10872689 - 10872766
Alignment:
Q  142 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10872689 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 51691502 - 51691343
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-t 154  Q
    ||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||| |||||  ||||||||||   || |||||||| |||||| | ||| |    
T  51691502 aaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatata---tagctttttaataaataattattagt 51691406  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    |||||||||| | ||| | |||||||||| |||||||| || ||| |||||||| ||| |||||    
T  51691405 tttcaataaagacttact-attttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 3728317 - 3728249
Alignment:
Q  152 tattttcaataaaaa-gttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||| |||| || ||||||||||| |||||| |  ||||||| |||||||| ||||||    
T  3728317 tattttcaataaaaaagttactacttttagttgttataacatgttcaatattgtacatgttagacaaac 3728249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 18882276 - 18882352
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 124  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||    
T  18882276 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 35645071 - 35645126
Alignment:
Q  109 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaa 166  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||| |||||||||||||    
T  35645071 cattttatattaaatata---taactttttaataaataattgttatttttcaataaaaa 35645126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 42750396 - 42750289
Alignment:
Q  109 cattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    ||||||||||||||   | ||||||||||||| |||||| | || |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  42750396 cattttatattaaa---attgtaactttttaataaataattattgttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacat 42750300  T
Q  209 gttaaacaaac 219  Q
    |||||||||||    
T  42750299 gttaaacaaac 42750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 47457470 - 47457638
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||||||| || || ||| | |||| ||||| |||  |||| | |||||||||||| ||   ||||| ||||| || ||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatat---gtgtagcttttaaataaataa 47457566  T
Q  148 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
     ||||||||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| |||||    
T  47457567 ttgttattttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 26300740 - 26300572
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||||||||  | ||||| ||||| |||||||| ||   ||||||||||| || |      
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgta---taactttttaataatttt 26300644  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 220  Q
     | || ||||||||| | | ||| || ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26300643 ttttt-ttttcaatacagaattaatacttttagttgttttaacatatgcaatattacacatgttagacaaaca 26300572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 24462964 - 24463132
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || |||||  ||| ||||| ||    ||||||||||||||||||||||   ||||  ||||||| |||||     
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata---tgtagttttttaataaatac 24463060  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||||||||| || ||| || |||||||||  ||||||| || |||||| ||||||||| ||||||    
T  24463061 ttgttgttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaac 24463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 33343157 - 33342989
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatata---taactttttgttaaataa 33343061  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  33343060 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 33342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 7170171 - 7170005
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 7170075  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  7170074 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 25709408 - 25709570
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | |||| ||||| ||||||||||    ||| |||||||| |||| |    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaata---ggtagctttttaataaatta 25709504  T
Q  148 ctgttattt-tcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 212  Q
     |||| ||| |||||||||| ||| || ||||||||| |||||||| || |||||| |||||||||    
T  25709505 ttgttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgtta 25709570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 46290179 - 46290011
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 46290083  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || ||| |||||||||||| ||||||    
T  46290082 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaac 46290011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 4969942 - 4969773
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 4969846  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | |  |||| ||| |||||| || || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  4969845 ttatagttttccaagaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 4969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 19889509 - 19889341
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 19889414  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  19889413 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 19889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 19868221 - 19868114
Alignment:
Q  110 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    |||||||||||||||||   ||||||||| | |||||| || | |||| |||| |||| ||| || |||||||||| ||||||| || ||||||||||||    
T  19868221 attttatattaaatata---taactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatgtgcaatattgcacat 19868125  T
Q  209 gttaaacaaac 219  Q
    |||| ||||||    
T  19868124 gttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 34270430 - 34270266
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 34270334  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||     ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34270333 ttgttggtttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcacatgttagacaaac 34270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 9332130 - 9331962
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 9332035  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9332034 ttgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 23982764 - 23982933
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||| |||||||| || ||| | |||| ||||| |||  | ||||  ||||||||||||||||    ||| ||||||| || |||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatt---taagtttttaataattaa 23982860  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||| ||| |||||||| || |||||||||  ||||||| | ||||||||||||||||| ||||||    
T  23982861 ttgttggttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaac 23982933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 33072150 - 33072072
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata 33072072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 36548469 - 36548636
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| ||   |||||||  |||||||||||||||   |||| | |||||  |||||    
T  36548469 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatat---gtaa-tatttaatcaataa 36548564  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
     ||||  ||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| |||||    
T  36548565 ttgttggttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 47707911 - 47708065
Alignment:
Q  66 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaa 164  Q
    |||||||||| || ||||| |||| |||||||||  | || |||||||| |||||||||||   ||||||||||| |||||| ||||  ||||| |||||    
T  47707911 atgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatata---taactttttaataaataattgttgtttttccataaa 47708007  T
Q  165 aagttattaattt---tagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |  || ||| |||   ||||||||||||||| ||||| |||||| ||| || ||||||    
T  47708008 atcttgttacttttagtagttgttttaacatgtgtaacattgcatatgatagacaaac 47708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 3530177 - 3530264
Alignment:
Q  102 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 192  Q
    |||||| |||||||||| |||||||   ||| ||||||| |||||| |||| ||||||||||||| |||||| | ||| ||| ||||||||    
T  3530177 atttgtgcattttatatcaaatata---taattttttaataaataattgttgttttcaataaaaaattattattcttaattgctttaacat 3530264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 8091321 - 8091463
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | || |||||||| | |||||||||   ||||||||||| ||||||    
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatata---taactttttaataaataa 8091417  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacat 192  Q
     | || |||||||||||||| ||  || ||||||||| ||| ||||    
T  8091418 ttattgattttcaataaaaatttgctacttttagttgctttgacat 8091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 26050470 - 26050516
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 94  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 26059829 - 26059875
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 94  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 29398143 - 29398221
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19017888 - 19017925
Alignment:
Q  1 agataattttatttgatgatgttttattgttggtataa 38  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  19017888 agatagttttatttgatgatgttttattgttagtataa 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 24250379 - 24250314
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  24250379 ttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 24250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 29398227 - 29398292
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  29398227 ttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 29398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 12650911 - 12650831
Alignment:
Q  130 taactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 209  Q
    ||||||||||| |||||| || || |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||    
T  12650911 taactttttaataaataattggtagttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcacatg 12650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 26682237 - 26682068
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||   ||||| |||||||| ||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat---gtgtagctttttaataaataa 26682141  T
Q  148 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| ||||||    
T  26682140 ttgttgttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 6818186 - 6818017
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 6818090  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||||  ||||||| || ||||||||  ||||||||||  |||||||||||||||| ||||||    
T  6818089 ttgttctttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaac 6818017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 31812282 - 31812113
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||| ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 31812186  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||| ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  31812185 gttttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 31812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 3306064 - 3306232
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   ||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatata---taactttttgttaaataa 3306160  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  3306161 ttgttggtttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 3306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 20514802 - 20514632
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| || ||||| ||| |||||||| || |||||||||| ||||  |||  | |||||||||||||||||||||||   ||||||||||| ||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatata---taactttttaataaataa 20514706  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaata-ttgcacatgttaaacaaac 219  Q
     || || |||||||||| || ||| || ||| ||||| |||| ||| || |||| |||||||||||| ||||||    
T  20514705 ttggtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaac 20514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 2161556 - 2161388
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| |||||||  ||||||||||   |||||||||   ||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatata---taactttttgttaaataa 2161460  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2161459 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2161388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 7750733 - 7750668
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 7750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 12132145 - 12131983
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgt-ta 153  Q
    |||| ||| |||||||||||| || ||| | |||| |||| ||||  | ||| |||||||||||||||||||   ||||||||||| |||||  |||       
T  12132145 caaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatata---taactttttaataaatacttgtggt 12132049  T
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||||  || ||||||||  |||||||| || ||| |||||||||||| ||||||    
T  12132048 ttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaac 12131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 9580118 - 9580287
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  |||||||||||| || ||||| | || |||| ||||  | |||||||||| |||||||||||| | |   |||| || ||||||    
T  9580118 tcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataattt---ttttgaataaataa 9580214  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||| ||| ||||||    
T  9580215 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaac 9580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 14816198 - 14816303
Alignment:
Q  112 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14816198 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14816294  T
Q  211 taaacaaac 219  Q
    || ||||||    
T  14816295 tagacaaac 14816303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 14829542 - 14829437
Alignment:
Q  112 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14829542 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14829446  T
Q  211 taaacaaac 219  Q
    || ||||||    
T  14829445 tagacaaac 14829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 38843817 - 38843704
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  38843817 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 38843721  T
Q  203 gcacatgttaaacaaac 219  Q
    |||||||||| ||||||    
T  38843720 gcacatgttagacaaac 38843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 11923080 - 11923015
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||||||||| | ||| |||||||||||| | || |||||||||||||||| ||||||    
T  11923080 ttttcaataaaaagttatcattttcagttgttttaacttgtgcaatattgcacatgttagacaaac 11923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 38527886 - 38527821
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| ||||||||||| |||||||||  ||||||| || |||||||||||||||| ||||||    
T  38527886 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 38527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 39024866 - 39024998
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  |||||| ||||||||||||| ||   ||||  ||||||| || |||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaacta---tgtagatttttaataattaa 39024962  T
Q  148 ctgttattttcaataaaaagttattaattttagttg 183  Q
     ||||  ||||||||||||||||||| |||||||||    
T  39024963 ttgttggtttcaataaaaagttattacttttagttg 39024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 12189597 - 12189766
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 146  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12189692  T
Q  147 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12189693 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 12434025 - 12434194
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 146  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12434120  T
Q  147 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12434121 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 34741730 - 34741813
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaac 190  Q
    |||| ||||||||||||||||||   ||| ||||||| |||||| | || |||||||| ||||||| ||| ||||||||||||||||    
T  34741730 ttgtgcattttatattaaatata---taattttttaataaataattattgttttcaattaaaagttgttatttttagttgttttaac 34741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 8284660 - 8284747
Alignment:
Q  133 ctttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||| |||| ||||  |||||||||||| || ||||||||| |||||||| || |||| ||||||||||| ||||||    
T  8284660 ctttttaataaataattgttcttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaac 8284747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 45006131 - 45005970
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 154  Q
    |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||| | ||||||||||||    ||||||| || |||||| |||| |    
T  45006131 caaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataa---aacttttgaataaataattgttgt 45006036  T
Q  155 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45006035 tttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 5298157 - 5298077
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaag---ttattaattttagttgttttaacatatgtaatattgcacatgtt 211  Q
    ||||||| |||||| |||| |||||||||||||    || ||| ||||||| |||||||||| ||||||||||||||||||    
T  5298157 tttttaataaataattgttgttttcaataaaaaaaatttgttagttttagtagttttaacatgtgtaatattgcacatgtt 5298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 13327950 - 13328118
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 13328045  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13328046 ttgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 35678347 - 35678452
Alignment:
Q  112 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  |||||||| |||||||| || ||||||||  |||||||| || ||||||||||||||    
T  35678347 tttatattaaatat---gtaaatttttaataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 35678443  T
Q  211 taaacaaac 219  Q
    || ||||||    
T  35678444 tagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 36967079 - 36967248
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatata---aaacttttgaatatataa 36967175  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||| ||||||||| || | |||||||| ||||||| |  ||| |||||||||||| ||||||    
T  36967176 ttgttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaac 36967248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 7140571 - 7140636
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  7140571 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 7140636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 9825024 - 9824959
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||||| |||||||| |||  |||||||||  ||||||||| |||||| ||||||    
T  9825024 ttttcaataaaaagttactaattttaattgcattaacatatacaatattgcatatgttagacaaac 9824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 16445801 - 16445893
Alignment:
Q  105 tgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaat 199  Q
    ||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||||||||||    
T  16445801 tgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatatgtaat 16445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 40210933 - 40210998
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  40210933 ttttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaac 40210998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 11947016 - 11947076
Alignment:
Q  158 caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    |||||||||||||| | |||||||||||||||| | || ||||||| |||||||| |||||    
T  11947016 caataaaaagttatcatttttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 9743967 - 9743862
Alignment:
Q  111 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 209  Q
    |||||||||||||||   ||||||||| || |||||| ||||  ||||||||||||| ||| || |||||||||| |||||||    |||||||||||||    
T  9743967 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatgcacaatattgcacatg 9743872  T
Q  210 ttaaacaaac 219  Q
    ||| ||||||    
T  9743871 ttagacaaac 9743862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 10974619 - 10974725
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||||||||||||||   ||||| ||||||| |||||  | ||  |||||||||||| |||| || ||||||||| ||||||||||  |||| |    
T  10974619 ttgtacattttatattaaata---tgtaattttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacatatacaatagt 10974715  T
Q  203 gcacatgtta 212  Q
    ||| ||||||    
T  10974716 gcatatgtta 10974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 28014867 - 28015032
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataa 28014963  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     |||| |||| || ||||||||| |    | |||| ||||||| | ||||| ||||||||||||| ||||    
T  28014964 ttgttgtttt-aaaaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgttagacaa 28015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 2083078 - 2083156
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    |||||| |||||||  |||| ||||||| ||||||||   ||||||| ||||  |||||| ||||||||||||||||||    
T  2083078 tcatgtgcaaatttacacatcttaagaagttcaaaataacaaatttgtattgaaatttgttcattttatattaaatata 2083156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 11117129 - 11117175
Alignment:
Q  173 aattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||    
T  11117129 aattttagttgctttaacatgtgcaatattgcacatgttagacaaac 11117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 26834730 - 26834561
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| | || ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 26834634  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  ||||||||||||| ||| || |||||| | | ||| ||| || ||| ||||| |||||| ||||||    
T  26834633 gttttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaac 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 32186295 - 32186186
Alignment:
Q  108 acattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcac 206  Q
    |||||| ||||||||||||    ||||||| || | |||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||| |    
T  32186295 acatttaatattaaatataa---aacttttgaatatataaatgttgttttctaagaaaaagttactactattagttgttttaacatttgcaatgttgctc 32186199  T
Q  207 atgttaaacaaac 219  Q
    |||||||||||||    
T  32186198 atgttaaacaaac 32186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 37523806 - 37523756
Alignment:
Q  171 ttaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaa 221  Q
    |||||||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  37523806 ttaattttagctgttttaacatgtgcaatattgtacatgttagacaaacaa 37523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 38213081 - 38213123
Alignment:
Q  177 ttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaac 38213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 44091404 - 44091346
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 192  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  44091404 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 10129169 - 10129104
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||| ||| |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  10129169 ttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 10129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 12346071 - 12346006
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||| ||||||||| || | ||| |||||||||||| |||||| |||||||||| | ||||||    
T  12346071 ttttcaagaaaaagttactactattaattgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 45516373 - 45516316
Alignment:
Q  135 ttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 192  Q
    |||||| |||||| ||||| |||||||||||||||| || |||||||| | |||||||    
T  45516373 ttttaataaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 1844572 - 1844731
Alignment:
Q  51 tgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactg 150  Q
    ||||||| |||  |||||||||||| ||||||||  |||||||| || |  |||| |  |||||||||||||||   | ||||||||||| |||||| ||    
T  1844572 tgtacaagtttacacatgttaagaaattcaaaataataaatttgtatcgaaatttatgtattttatattaaata---tttaactttttaataaataattg 1844668  T
Q  151 tta-ttttcaataaa-aagttattaattttagttgttttaacatatgtaatattgcacatgtt 211  Q
    ||| |||| |||||| || ||  || |||||||||||| ||| | || ||||||| |||||||    
T  1844669 ttactttttaataaagaaatttctacttttagttgtttcaacgtgtgcaatattgtacatgtt 1844731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 35583453 - 35583368
Alignment:
Q  134 tttttaacaaataactgttattttcaata---aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
    |||||||||||||| |||| |||||||||   ||||||| || ||||||  ||||||||||| || ||||||| |||||||| ||||    
T  35583453 tttttaacaaataattgttgttttcaataaataaaagttgtt-attttaaatgttttaacatgtgcaatattgtacatgttagacaa 35583368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 40568378 - 40568314
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    |||| ||||||||||||  | |||||||||||||||||| || |||||||||  ||||| |||||    
T  40568378 tttttaataaaaagttacaacttttagttgttttaacatgtgaaatattgcatgtgttagacaaa 40568314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 15411632 - 15411800
Alignment:
Q  49 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 148  Q
    ||||| |||||||| |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||||| |||| |     
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatat---gtagctttttaataaattat 15411728  T
Q  149 tgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||| |||| ||||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  15411729 tgttgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 15411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 9747486 - 9747317
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||| |||||||     
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatat---gtagcttttttacaaatag 9747390  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||||||| ||||| || ||||||||  |||||||| |||| |||||||||||||| ||||||    
T  9747389 ttgttgtttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaac 9747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 5583574 - 5583735
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 154  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  5583574 caaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 5583670  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5583671 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 14377593 - 14377425
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| |||||||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatat---gtaactttt-aacaaataa 14377498  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  ||||||||||||||||| || |||||||||  ||||||| || |||||||||| ||||| ||||||    
T  14377497 ttgttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 14377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 12438740 - 12438825
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||| |||||| ||||  ||| ||| ||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||    
T  12438740 tttttaataaataattgttggttttaatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgttatacaaac 12438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 45062367 - 45062207
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||| ||||||| |||||||| |||| |||   |||  | |||| |||||||||||||| ||   |||||||||||| ||||||    
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacat---gtaactttttaataaataa 45062271  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
     | || ||||  ||||||||||||  | ||||| |||||||||||||| |||||||| ||||||    
T  45062270 tttttgttttttaataaaaagttaccacttttaattgttttaacatatttaatattgtacatgt 45062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 23932734 - 23932565
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| | || ||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 23932638  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  23932637 ttgttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 23932565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 27665053 - 27665221
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 27665148  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  27665149 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 27665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 43806521 - 43806360
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 155  Q
    ||||||| ||||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| ||    
T  43806521 aaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataattgttgtt 43806425  T
Q  156 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||| || ||||||||| || | ||| |||||||||||| || ||| |||||||||||| ||||||    
T  43806424 ttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttagacaaac 43806360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 24729586 - 24729718
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||||| ||||| |||||| || |   ||||||||||| ||||||    
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattaca---taactttttaataaataa 24729682  T
Q  148 ct-gttattttcaataaaaagttattaattttagtt 182  Q
     |  |||||||||||||||| ||| || ||||||||    
T  24729683 ttatttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 34213965 - 34214129
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta- 153  Q
    |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||| ||||||| ||||||| ||| | ||||||||||  |||||| ||||      
T  34213965 caaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaata-tataactttttataaaataattgttgg 34214063  T
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||| ||| || ||||||||| |||||||| || | ||||  |||||||| ||||||    
T  34214064 ttttcaataaaaacttactatttttagttgctttaacatgtgcagtattatacatgttagacaaac 34214129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 34817649 - 34817544
Alignment:
Q  111 ttttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    |||| |||||||||||   ||||||||||| |||||| |||| ||||||||||| ||||  || |||||||| |||||| |  || ||||||||| ||||    
T  34817649 ttttttattaaatata---taactttttaataaataattgttgttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgt 34817553  T
Q  211 taaacaaac 219  Q
    || ||||||    
T  34817552 tagacaaac 34817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 39367149 - 39367059
Alignment:
Q  130 taactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||| |||||| | || |||||||||||||  || ||||||||||||| ||||||||| |||||  || |||||||| ||||||    
T  39367149 taactttttaataaataattattgattttcaataaaattttgttaattttagttgctttaacatacgtaatggtgtacatgttagacaaac 39367059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 7757795 - 7757963
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 7757891  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  ||| |||||||| || ||| ||||||||   ||||||| |  ||| |||||||||||| ||||||    
T  7757892 ttgttggttttaataaaaacttgttacttttagttaccttaacatgtacaattttgcacatgttagacaaac 7757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 12016732 - 12016667
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12016732 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 2579983 - 2580082
Alignment:
Q  64 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 163  Q
    |||||||||||| |||||| | |||| |||| ||||   |||||| ||||||| |||||||| |   || |||||||||||||| ||||||||| |||||    
T  2579983 acatgttaagaagttcaaactagtaagtttgtattgaattttgtatattttatgttaaatattg---aattttttaacaaataattgttatttttaataa 2580079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 7720180 - 7720116
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| |||||    
T  7720180 ttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 26003355 - 26003431
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 124  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 2051721 - 2051639
Alignment:
Q  110 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatat 194  Q
    ||||||||||||||||    ||| ||||||| |||||| |||| |||| ||||||||| ||  |||||||||||||||||||||||    
T  2051721 attttatattaaatatt---taaatttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacatat 2051639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 43388857 - 43388944
Alignment:
Q  133 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  43388857 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 43388944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 19228594 - 19228426
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 19228499  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  19228498 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 19228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 36612796 - 36612909
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36612796 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36612892  T
Q  203 gcacatgttaaacaaac 219  Q
    |||||||||| ||||||    
T  36612893 gcacatgttagacaaac 36612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 36620647 - 36620760
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36620647 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36620743  T
Q  203 gcacatgttaaacaaac 219  Q
    |||||||||| ||||||    
T  36620744 gcacatgttagacaaac 36620760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 36909503 - 36909553
Alignment:
Q  169 tattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  36909503 tattacttttaattgttttaacatgtgtaatattgcatatgttagacaaac 36909553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 39904159 - 39904225
Alignment:
Q  153 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  39904159 attttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 4579901 - 4579966
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| ||  |||||||   ||||||| ||||||||||||||||||| ||||||    
T  4579901 ttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgttagacaaac 4579966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 16755028 - 16754971
Alignment:
Q  162 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  16755028 aaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 16754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 16919266 - 16919331
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||| ||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  16919266 ttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 22705520 - 22705455
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  22705520 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 22705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 26003612 - 26003669
Alignment:
Q  162 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  26003612 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 26003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 25998088 - 25998172
Alignment:
Q  128 tgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 211  Q
    |||| |||||||| |||||| |||| |||| |||||||||||| | | ||||||||  |||||||| || |||| ||||||||||    
T  25998088 tgtatctttttaataaataattgttgtttttcaataaaaagttttcacttttagttactttaacatgtgcaataatgcacatgtt 25998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 26229864 - 26230030
Alignment:
Q  49 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 148  Q
    ||||| ||||||||  || |||||||| || ||||| |||| ||||| ||   |||| ||  |||||||||||||||   ||||||||| | ||| |||     
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatat---gtaacttttaatcaa-taat 26229959  T
Q  149 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||  ||| |||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  26229960 tgttggttttaataaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 26230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 6017025 - 6016856
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||||||| || || ||| |||||| ||||| |||  | |||| ||||| ||||||||||||   ||||||||||| ||||||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatata---taactttttaaaaaataa 6016929  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||| ||| ||| ||| || ||| |||||||||||| ||||||    
T  6016928 gtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaac 6016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 30623477 - 30623326
Alignment:
Q  66 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaa 164  Q
    |||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||    
T  30623477 atgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataa---aacttttgaataaataattgttgtttttcaagaaa 30623381  T
Q  165 aagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| || | |||||||||||||||| |||||| |||||||||||| ||||||    
T  30623380 aagttactactattagttgttttaacatgtgtaatgttgcacatgttagacaaac 30623326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 8977483 - 8977644
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 154  Q
    ||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| | ||||  |    
T  8977483 aaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatgattgttgtt 8977579  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||| ||| |||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  8977580 tttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 8977644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 34692523 - 34692354
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 34692427  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  34692426 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 34692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 14228135 - 14228303
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 14228231  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  14228232 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 14228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 28943778 - 28943946
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 28943874  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  28943875 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 28943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 29730383 - 29730295
Alignment:
Q  112 tttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||||||||   ||||||||||| ||||||||||| |||| ||||||||| |||||||||||| | | ||||||||||| ||||||    
T  29730383 tttatattaaatata---taactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacatatgcaatatt 29730295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 10887198 - 10887031
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | ||||  |||||||||||||||   |||| |||||||| ||||||    
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaata---tgtagctttttaataaataa 10887102  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||    
T  10887101 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 219
Target Start/End: Complemental strand, 33017891 - 33017725
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 149  Q
    |||| |||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| |    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataatt 33017795  T
Q  150 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||  ||| |||||||| ||  |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  33017794 gttggttttaataaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 33017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 1017803 - 1017956
Alignment:
Q  64 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaata 162  Q
    |||||||||||| || ||| | |||| ||||| |||  | |||| ||||||||||||||||   ||||| ||||||| |||||| ||||  |||||||      
T  1017803 acatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaata---tgtaaatttttaataaataattgttggttttcaacg 1017899  T
Q  163 aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| || |||||||| ||| | ||| || | |||||||||||||| ||||||    
T  1017900 aaaagttactacttttagttatttaatcatgtgcagtattgcacatgttagacaaac 1017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 29863311 - 29863480
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| |||  | |  | || | ||||||||||||| ||||    |||||||||| ||||||    
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataa---aactttttaataaataa 29863407  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | || |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  29863408 ttattctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 29863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 1814894 - 1814959
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||||  | ||| ||||||||| |||||||| || |||||||||||||||| ||||||    
T  1814894 ttttcaataaaaatatgttacttttagttgctttaacatgtgcaatattgcacatgttagacaaac 1814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 3485711 - 3485776
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||||| |  |||||||||||  |||||||||||||||||| || |||||| ||||||    
T  3485711 ttttcaataaaaaggtgctaattttagttcctttaacatatgtaatattacatatgttagacaaac 3485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 17552596 - 17552764
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| | || ||||  | ||| ||||||| |||||||||||   ||| |||||   ||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatata---taattttttgttaaataa 17552692  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||| ||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  17552693 ttgttggtttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 17552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 24979262 - 24979327
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  24979262 ttttcaagaaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 24979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 17596370 - 17596315
Alignment:
Q  162 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
    ||||||||| || |||||||||| ||||||| || |||||||||||||||| ||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 18332697 - 18332866
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  |||||||||||| || ||| || ||| ||||| |||  | || | ||||| ||||||||||||   || |||||||| ||||||    
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatata---tagctttttaataaataa 18332793  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | || |||| ||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  18332794 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 18332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 5363005 - 5363070
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5363005 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 30839950 - 30839782
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 30839854  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  30839853 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 30839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 36597748 - 36597580
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 36597652  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  36597651 ttgttggtttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 36597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 8103589 - 8103755
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 8103685  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  8103686 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 18841721 - 18841883
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 154  Q
    |||||||| | ||||||| || || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || |||||| |||| |    
T  18841721 caaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgttgt 18841817  T
Q  155 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  18841818 tttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 18841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 3398389 - 3398220
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 3398293  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  3398292 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 3398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 40513120 - 40512952
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||| ||||  ||||| | ||||| ||| |||||||   |||||||||   ||||||    
T  40513120 tcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatata---taactttttgttaaataa 40513024  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||| || || |||||   ||||||| || |||||||||||||||| ||||||    
T  40513023 ttgttgatttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaac 40512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 5958196 - 5958301
Alignment:
Q  112 tttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    ||||||||||||||   |||| ||||||| || ||| |||| ||||||||| |||| ||| || ||||||||  |||||||| |||||||||||||||||    
T  5958196 tttatattaaatat---gtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgt 5958292  T
Q  211 taaacaaac 219  Q
    || ||||||    
T  5958293 tagacaaac 5958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 11636900 - 11636732
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||| |||||||||||   |||| ||||||| || |||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat---gtaaatttttaataattaa 11636805  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  11636804 ttgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 11636732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 15240959 - 15241065
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||||||| || ||||||||  |||||||| ||||  |||||| ||| ||||||||||||||   ||| ||||||| ||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatata---taattttttaataaataa 15241055  T
Q  148 ctgttatttt 157  Q
     |||| ||||    
T  15241056 ttgttgtttt 15241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 10665053 - 10665134
Alignment:
Q  130 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 211  Q
    ||||||||||| |||||| |  |||||||||| ||||||||||| ||||||||   ||||||| || |||||| ||||||||    
T  10665053 taactttttaataaataattaatattttcaatgaaaagttattacttttagttaccttaacatgtgcaatattacacatgtt 10665134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11360243 - 11360186
Alignment:
Q  162 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||| ||| || |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11360243 aaaaaattactacttttagttgttttaacatgtgtaatattgaacatgttaaataaac 11360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 11250090 - 11250134
Alignment:
Q  175 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  11250090 ttttagttgctttaacatgtgcaatattgcacatgttaaacaaac 11250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 28629984 - 28629890
Alignment:
Q  111 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    |||||||||||||||   ||||||||| || |||||| ||||  |||||||| ||||||||||| ||||||||| |||||||| || ||||||| ||||    
T  28629984 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaatattgtacat 28629890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 33072721 - 33072677
Alignment:
Q  175 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  33072721 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 2795692 - 2795524
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 2795597  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2795596 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 11376026 - 11375972
Alignment:
Q  153 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 207  Q
    ||||||||| |||||||| || ||||||||| |||||||| || |||||||||||    
T  11376026 attttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 15820379 - 15820317
Alignment:
Q  64 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    |||||| ||||| |||||||| ||||||||| ||||  ||||| ||||||| |||||||||||    
T  15820379 acatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatata 15820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 23995427 - 23995516
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaa 140  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||||||||||| ||||||||||| | |||||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatata-tataactttttaa 23995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 31567507 - 31567577
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 125  Q
    |||||||| ||||||||| || || |||||||||| ||||  |||  |||||| |||||||||||||||||    
T  31567507 caaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatat 31567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 34578078 - 34578012
Alignment:
Q  153 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| |||| |||||| ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34578078 attttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaac 34578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 40309497 - 40309580
Alignment:
Q  109 cattttatattaaatatagtgtaactttttaacaaataactgttatttt---caataaaaagttattaattttagttgttttaacat 192  Q
    ||||||||||||||||||   ||||||||||| |||| | |||||||||   ||||||||  || ||| ||||||||||||||||||    
T  40309497 cattttatattaaatata---taactttttaataaattattgttatttttttcaataaaatattgttacttttagttgttttaacat 40309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 24014800 - 24014865
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||| |||||||| ||  || |||||||||||||||||| || ||| |||||||||||| ||||||    
T  24014800 ttttgaataaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgttagacaaac 24014865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 6863725 - 6863610
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||||||| || || ||||| |||| |||  ||||  | ||| ||||||| |||||||||||   ||||||||||  ||||||    
T  6863725 tcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatata---taactttttattaaataa 6863629  T
Q  148 ctgttattttcaataaaaa 166  Q
     ||||  ||||||||||||    
T  6863628 ttgttggtttcaataaaaa 6863610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 7163010 - 7162934
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 124  Q
    |||||||||||| || |  | |||||||||| ||||| |||| |||||||||  | |||| ||||||||||||||||    
T  7163010 tcatgtacaaatatgtattttttaagaattttaaaatagtaagtttgaattgaaacttgttcattttatattaaata 7162934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 2571437 - 2571269
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 2571341  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2571340 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 10307935 - 10307767
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| ||||||||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 10307839  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||||||| ||  || ||||||||   ||| ||| || |||||||||||||||| ||||||    
T  10307838 ttgttggtttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaac 10307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 54527717 - 54527884
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 149  Q
    |||| |||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataa---aacttttgaataaataatt 54527813  T
Q  150 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  54527814 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 38389616 - 38389447
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 38389520  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  38389519 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 38389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 50204572 - 50204403
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||||| ||||||||||||    ||||||| || | ||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataa---aacttttgaatatataa 50204476  T
Q  148 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||||||||| || ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  50204475 ttgttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 50204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 20938162 - 20938056
Alignment:
Q  111 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 209  Q
    |||||||||||||||   |||| |||||||  ||||| ||||| |||||||||||||||||||| ||||||||   ||||||| || |||||||||||||    
T  20938162 ttttatattaaatat---gtaa-tttttaatcaataattgttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatg 20938067  T
Q  210 ttaaacaaaca 220  Q
    ||| |||||||    
T  20938066 ttagacaaaca 20938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 46492352 - 46492519
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||  ||| |||||||| || ||| | |||| |||| ||||  | ||||||||||| |||||||||||   |||||  |||| ||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatata---taactcgttaataaataa 46492448  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
     |||| |||| ||||||||| |||  | ||||||||| |||||||| || |||||||||||| ||||||||    
T  46492449 ttgttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaa 46492519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 51618216 - 51618050
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||||||||| |||||||||||   ||   |||||| ||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatata---ta---ttttaataaataa 51618123  T
Q  148 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     |||| |||| || |||||| ||  |  |||||||||||||||||| || |||||||||||||||| ||||||    
T  51618122 ttgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgttagacaaac 51618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 53794872 - 53794781
Alignment:
Q  109 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||||||||||   |||||||||||| |||| | ||||| ||||||||||| |||||||| ||||||||| |||||||| || ||||||    
T  53794872 cattttatattaaatat---gtaactttttaataaattattgttacttttcaataaatagttattatttttagttggtttaacatgtgcaatatt 53794781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 2379162 - 2379238
Alignment:
Q  132 actttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 210  Q
    ||||||||| |||||| |||||||  ||||||||| ||| || |||||||||||||||||| || ||||||||||||||    
T  2379162 actttttaataaataattgttatt--caataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 38786343 - 38786468
Alignment:
Q  58 atttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 157  Q
    ||||| |||||||||||| || ||||| |||| ||||| |||  ||||||  |||||||| |||||   |||||  ||||||| |||||| |||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaat---gtgtat-tttttaataaataattgttatttt 38786438  T
Q  158 caataaaaagttattaattttagttgtttt 187  Q
    ||||||||| ||| || |||||||||||||    
T  38786439 caataaaaaattactatttttagttgtttt 38786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 11611083 - 11610915
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 11610988  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  11610987 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 11610915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 24569324 - 24569408
Alignment:
Q  129 gtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 212  Q
    |||||||||||| |||||| || | |||| |||||||||||||||| || ||||||| ||||||| |  ||||||||||||||||    
T  24569324 gtaactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgtta 24569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 37444232 - 37444149
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 217  Q
    ||||||| || ||| ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  37444232 tttttaataattaattgttgatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaa 37444149  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 40330381 - 40330468
Alignment:
Q  133 ctttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 220  Q
    |||||||| |||| | |||| |||||||| |||||||| || ||||| |||||||| |||  ||||| ||||| ||||||||||||||    
T  40330381 ctttttaataaattattgttgttttcaattaaaagttactatttttaattgttttatcatgcgtaatgttgcatatgttaaacaaaca 40330468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 13495455 - 13495294
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 154  Q
    ||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||||   |||  ||||||| |||||| |||| ||    
T  13495455 aaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatat---gtaggtttttaataaataattgttgat 13495359  T
Q  155 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||| ||| || ||||||||   ||||||| || ||  |||||||||||| ||||||    
T  13495358 tttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaac 13495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 42180213 - 42180052
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 155  Q
    ||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| | |  ||    
T  42180213 aaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataa---aacttttaaataaataattatagtt 42180117  T
Q  156 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  42180116 ttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 42180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 37055455 - 37055544
Alignment:
Q  131 aactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||| |||||| |||| |||| ||||  ||||||| || ||||||||  ||||||||||| ||||||| |||||||| ||||||    
T  37055455 aactttttaataaataattgttctttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaac 37055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 47387013 - 47386922
Alignment:
Q  130 taactttttaacaaataactgttatttt--caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||||| |||||| |||| ||||  ||||||||| ||| || ||||||||| ||||| ||  | |||||||||||||||| ||||||    
T  47387013 taactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaac 47386922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 51401607 - 51401531
Alignment:
Q  50 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    ||||||||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 51401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 8497550 - 8497601
Alignment:
Q  168 ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| |||||||||||||||||| || ||| |||||||||||||| ||||    
T  8497550 ttattacttttagttgttttaacatgtgcaatgttgcacatgttaaataaac 8497601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 212
Target Start/End: Complemental strand, 45983675 - 45983516
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| ||| |||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||   | |||||| |||||||||    
T  45983675 tcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatata---ttacttttgaacaaataa 45983579  T
Q  148 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 212  Q
     |||| ||   || ||||||||| || | ||| ||||||||||  ||||||| ||||||||||||    
T  45983578 ttgtttttcaaaaaaaaaagttactactattaattgttttaac--atgtaatgttgcacatgtta 45983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 46845531 - 46845618
Alignment:
Q  133 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  46845531 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 46845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 13879899 - 13879973
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 208  Q
    ||||||| |||||| |||  |||||||||||||||| | | ||| |||| |||||| || |||||||||||||||    
T  13879899 tttttaataaataattgtggttttcaataaaaagttttcactttcagttattttaagatgtgtaatattgcacat 13879973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 25633167 - 25633121
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 94  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  25633167 tcatgtgcaaatttgaacttgttaagaagttcaaaatagtaaatttg 25633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 26200733 - 26200799
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 220  Q
    |||||| |||||||||| || |  |||||| ||||||||||| ||||||||| |||||| |||||||    
T  26200733 ttttcagtaaaaagttactactcctagttgctttaacatatgcaatattgcaaatgttatacaaaca 26200799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 12515491 - 12515651
Alignment:
Q  56 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 155  Q
    ||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||  |    
T  12515491 aaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataattgttggt 12515587  T
Q  156 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    || |||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12515588 tttaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12515651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 23523115 - 23523038
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 125  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 30214103 - 30214187
Alignment:
Q  135 ttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||| |||||| |||| ||||||||| |||||||| || |||||||||  |||  || ||||||||||||||||||| ||||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgttagacaaac 30214187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 32321835 - 32321899
Alignment:
Q  154 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    |||||||||||| |||  || |||||||| |||||||||||| |||||| ||||||||| ||||||    
T  32321835 ttttcaataaaa-gttgatatttttagttcttttaacatatgcaatattacacatgttatacaaac 32321899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 49396548 - 49396471
Alignment:
Q  49 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 126  Q
    ||||| |||||||| |||| ||||||| || ||| | |||||||||||||   |||| | ||||||||||||||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatata 49396471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 37123 - 37292
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| || ||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 37219  T
Q  148 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  37220 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 37292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 486 - 443
Alignment:
Q  175 ttttagttgttttaacatatgtaatattgcacatgttaaacaaa 218  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  486 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 13723 - 13829
Alignment:
Q  104 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 202  Q
    |||||||||  ||||||||||||    ||||||| || |||||||| || ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  13723 ttgtacattaaatattaaatataa---aacttttaaataaataacttttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 13819  T
Q  203 gcacatgtta 212  Q
    ||||||||||    
T  13820 gcacatgtta 13829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 8506 - 8564
Alignment:
Q  134 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 192  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  8506 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 52788 - 52956
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 52883  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  52884 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 52956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 94086 - 94195
Alignment:
Q  107 tacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 205  Q
    |||||||| |||||||||||  ||   ||||||| |||||| | ||| ||||||||||||| ||| || ||||||||| |||||||| || ||| |||||    
T  94086 tacattttgtattaaatatatagt---tttttaataaataattattagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgca 94182  T
Q  206 catgttaaacaaa 218  Q
     |||||| |||||    
T  94183 tatgttagacaaa 94195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 145846 - 145678
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 145751  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  145750 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 145678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 13254 - 13086
Alignment:
Q  48 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 147  Q
    |||||| |||||||| |||||||||||| || ||||| |||| ||| | |||  ||||||   |||||||||||||||   ||| ||||| | |||  ||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatat---gtagcttttaatcaac-aa 13159  T
Q  148 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
     ||||  |||||||| |||| ||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13158 ttgttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 18012 - 18111
Alignment:
Q  55 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 154  Q
    |||||||| || |||||| |  |||||||| |||  |||| ||||  |||||||||||||||||||||||||   ||||||| ||| |||||| |||| |    
T  18012 caaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatata---taactttctaataaataattgttgt 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 22504 - 22460
Alignment:
Q  175 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 219  Q
    ||||||||| |||||||| || |||||||||||||||||| ||||    
T  22504 ttttagttgatttaacatgtgcaatattgcacatgttaaagaaac 22460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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