View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_417 (Length: 249)
Name: NF10145A_low_417
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_417 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 11851325 - 11851097
Alignment:
| Q |
12 |
gacatgaacttcaaaccaatttcttacactaatagacatacagttatatgttttacatgtattaaagaagtatacatgaattcatctccatgaaatctac |
111 |
Q |
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| T |
11851325 |
gacatgaacttcaaaccaatttcttacactaatagacatacagttaaatgttttacatgtattaaagaagtatacatgaattcatctccatgaaatctac |
11851226 |
T |
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| Q |
112 |
aaagttcggatgctttcttggtttgcaatcaatctaaatcttgaaacaatctctatgtgcttgacacaaaaaattaagtgcttctcctcaagaagttggt |
211 |
Q |
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| T |
11851225 |
aaagttcggaagctttcttggtttgcaatcaatctaaatcttgaaacaatctctatgtgcttgacacaaaaaattaagtgcttctcttcaagaagttggt |
11851126 |
T |
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| Q |
212 |
ttcatgagaattgattaaatctcttcatt |
240 |
Q |
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| T |
11851125 |
ttcatgagaattgatgaaaactcttcatt |
11851097 |
T |
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