View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_431 (Length: 248)
Name: NF10145A_low_431
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_431 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 7059646 - 7059418
Alignment:
| Q |
20 |
catcatattactagtatgagtcaggtactggtacaagcaattcacaagctgtttcttctggttctccatctcctgcccaaatttcaaacctctggccaac |
119 |
Q |
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| T |
7059646 |
catcatattactagtatgagtcaggtactggtacaagcaattcacaagctgtttcttctggttctccatctcctgcccaaatttcgaacctctggccaac |
7059547 |
T |
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| Q |
120 |
caggacaaatcgtcgttaaaagcagggagcttacagttttgtaaagcatagatgattggttgagtcttcaaatttgagctccatcccaaagttggcaagt |
219 |
Q |
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| T |
7059546 |
caggacaaatcgtcgttaaaagcagggagcttacagttttgtaaagcatagatgattggttgagtcttcaaatttgagctccatcccaaagttggcaagt |
7059447 |
T |
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| Q |
220 |
acctttttaccattctactatcttcatca |
248 |
Q |
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| T |
7059446 |
acctttttaccattctactatcttcatca |
7059418 |
T |
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