View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_460 (Length: 246)
Name: NF10145A_low_460
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_460 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37373077 - 37373309
Alignment:
| Q |
1 |
agagaaatgtttatcaacagtttacacgtagatttatttccaccttcaagggaattttatttccactattttctttgaaaatgttatttattatgaagaa |
100 |
Q |
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| T |
37373077 |
agagaaatgtttatcaacagtttacacgtagatttatttccaccttcaagggaattttatttccactattttctttgaaaatgttatttattatgaagaa |
37373176 |
T |
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| Q |
101 |
tttgttgacatgaaaagaatggtccatagataagctcacaacatcaaaattaatatcatacaataacacaatagccacaaaagtgacaaatgtgaccaaa |
200 |
Q |
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| T |
37373177 |
tttgttgacatgaaaagaatggtccatagataagctcacaacatcaaaattaatatcatacaataacacaatagccacaaaagtgacaaatgtgaccaaa |
37373276 |
T |
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| Q |
201 |
atatcaatacttcgagatctacaacattgatgt |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
37373277 |
atatcaatacttcgagatctacaacattgatgt |
37373309 |
T |
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