View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_462 (Length: 246)
Name: NF10145A_low_462
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_462 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 29647850 - 29648077
Alignment:
| Q |
2 |
aactataaaatgtttacaaatttttacctgcattgctctccaatagtatggaagaaaggacactgcatagaaaagatctctatattgttttaccctcatg |
101 |
Q |
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| T |
29647850 |
aactataaaatgtttacaaatttttacctgcattgctctccaatagtatggaagaaaggacactgcatagaaaagatctctatattgttttaccctcatg |
29647949 |
T |
|
| Q |
102 |
cagtatccatagtcttgagtcttatagctcccagttatatagtaacatgccataaactctaggctccttagcattggaacctataaagaaattatatatg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
29647950 |
cagtatccatagtcttgagtcttatagctcccagttatatagtaacatgccataaactctaggctccttagcattggaacctataaagaaat----catg |
29648045 |
T |
|
| Q |
202 |
taactattaatataagagattaattttgatgt |
233 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
29648046 |
taactattaatataagagattaattttgatgt |
29648077 |
T |
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