View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_48 (Length: 423)

Name: NF10145A_low_48
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_48
NF10145A_low_48
[»] chr2 (70 HSPs)
chr2 (2-411)||(23877760-23878169)
chr2 (88-395)||(23102391-23102696)
chr2 (100-395)||(23089975-23090268)
chr2 (126-385)||(9241282-9241539)
chr2 (123-398)||(6482257-6482531)
chr2 (119-384)||(23169262-23169525)
chr2 (119-384)||(23580519-23580782)
chr2 (128-411)||(23263905-23264188)
chr2 (123-398)||(6485724-6485998)
chr2 (92-411)||(21907170-21907490)
chr2 (127-340)||(26582668-26582880)
chr2 (121-385)||(20260773-20261034)
chr2 (117-340)||(200634-200856)
chr2 (117-340)||(27367545-27367767)
chr2 (100-333)||(22809882-22810115)
chr2 (117-340)||(6744286-6744508)
chr2 (117-340)||(43693394-43693616)
chr2 (121-340)||(5706980-5707198)
chr2 (128-390)||(21073951-21074214)
chr2 (128-333)||(2105577-2105782)
chr2 (126-288)||(19703451-19703615)
chr2 (154-385)||(10685624-10685852)
chr2 (100-288)||(20724077-20724267)
chr2 (131-333)||(27295980-27296181)
chr2 (127-333)||(23290925-23291133)
chr2 (131-333)||(12572311-12572512)
chr2 (131-333)||(12578793-12578994)
chr2 (126-355)||(19649512-19649743)
chr2 (255-411)||(23269121-23269276)
chr2 (255-411)||(23275990-23276145)
chr2 (100-333)||(24943376-24943612)
chr2 (127-288)||(23752836-23752998)
chr2 (154-333)||(27785695-27785872)
chr2 (154-333)||(27790916-27791093)
chr2 (127-333)||(24658773-24658981)
chr2 (126-369)||(26884117-26884361)
chr2 (126-369)||(27210947-27211192)
chr2 (126-358)||(6261516-6261748)
chr2 (127-288)||(24652374-24652537)
chr2 (248-398)||(23062436-23062585)
chr2 (126-385)||(19662792-19663052)
chr2 (126-216)||(28971246-28971336)
chr2 (100-216)||(21133193-21133310)
chr2 (126-244)||(27208612-27208733)
chr2 (88-218)||(22796556-22796688)
chr2 (318-392)||(21124038-21124112)
chr2 (126-385)||(29280890-29281150)
chr2 (88-216)||(23062668-23062796)
chr2 (319-387)||(24660403-24660470)
chr2 (20-83)||(21907516-21907581)
chr2 (246-355)||(21133345-21133453)
chr2 (319-399)||(15643412-15643491)
chr2 (126-288)||(25181800-25181966)
chr2 (127-216)||(20648191-20648282)
chr2 (127-216)||(25267321-25267412)
chr2 (126-369)||(9486-9731)
chr2 (88-216)||(22860421-22860550)
chr2 (332-392)||(17633763-17633823)
chr2 (246-340)||(28971371-28971463)
chr2 (319-399)||(32911606-32911685)
chr2 (319-399)||(38931724-38931803)
chr2 (127-216)||(8889935-8890026)
chr2 (341-399)||(8890163-8890221)
chr2 (341-399)||(23672360-23672418)
chr2 (341-399)||(25267126-25267184)
chr2 (126-170)||(24660629-24660674)
chr2 (352-399)||(6744532-6744580)
chr2 (349-401)||(20914534-20914585)
chr2 (361-401)||(22840804-22840844)
chr2 (127-170)||(25107437-25107481)
[»] chr8 (59 HSPs)
chr8 (2-410)||(14057453-14057860)
chr8 (123-398)||(44476172-44476446)
chr8 (123-398)||(44479434-44479708)
chr8 (139-411)||(18609715-18609987)
chr8 (103-355)||(23825102-23825353)
chr8 (89-340)||(17053590-17053840)
chr8 (117-340)||(23865427-23865649)
chr8 (121-340)||(19902894-19903112)
chr8 (103-340)||(30766897-30767133)
chr8 (100-333)||(22025528-22025762)
chr8 (155-340)||(25409547-25409731)
chr8 (103-263)||(25110911-25111071)
chr8 (100-296)||(22063531-22063729)
chr8 (124-333)||(41009426-41009637)
chr8 (126-288)||(21668901-21669064)
chr8 (126-340)||(21282051-21282266)
chr8 (131-333)||(9273159-9273360)
chr8 (128-333)||(22177586-22177790)
chr8 (128-333)||(22050201-22050405)
chr8 (127-290)||(21326818-21326984)
chr8 (131-333)||(1804467-1804668)
chr8 (100-288)||(10606976-10607168)
chr8 (131-333)||(36799376-36799577)
chr8 (127-290)||(21322230-21322396)
chr8 (128-333)||(22055719-22055923)
chr8 (154-333)||(18681526-18681703)
chr8 (154-333)||(31567835-31568012)
chr8 (154-333)||(31573056-31573233)
chr8 (2-107)||(25111101-25111207)
chr8 (246-399)||(23653079-23653230)
chr8 (100-288)||(20973966-20974156)
chr8 (128-242)||(21300114-21300229)
chr8 (127-333)||(19988159-19988367)
chr8 (100-204)||(22176003-22176105)
chr8 (89-385)||(8728943-8729240)
chr8 (246-399)||(23653773-23653924)
chr8 (329-401)||(21930546-21930618)
chr8 (88-216)||(21683620-21683749)
chr8 (88-216)||(21687969-21688098)
chr8 (126-369)||(24321570-24321815)
chr8 (206-385)||(27942223-27942401)
chr8 (126-212)||(31412477-31412563)
chr8 (126-212)||(31418659-31418745)
chr8 (137-385)||(8596070-8596318)
chr8 (246-390)||(39363417-39363565)
chr8 (349-401)||(21839411-21839463)
chr8 (306-382)||(25110821-25110896)
chr8 (127-264)||(20839893-20840032)
chr8 (350-400)||(20012406-20012456)
chr8 (126-216)||(19859627-19859719)
chr8 (349-401)||(22743629-22743681)
chr8 (127-216)||(21690400-21690491)
chr8 (127-216)||(36445719-36445810)
chr8 (341-399)||(21686300-21686358)
chr8 (127-216)||(20783840-20783931)
chr8 (126-216)||(16259633-16259726)
chr8 (341-399)||(21683875-21683933)
chr8 (341-399)||(21688224-21688282)
chr8 (341-399)||(21690624-21690682)
[»] chr1 (66 HSPs)
chr1 (2-402)||(19663975-19664375)
chr1 (126-340)||(20438502-20438716)
chr1 (103-340)||(42095851-42096087)
chr1 (117-340)||(21542049-21542271)
chr1 (100-334)||(20045824-20046057)
chr1 (126-340)||(41110807-41111021)
chr1 (89-333)||(32650102-32650345)
chr1 (100-288)||(29554387-29554578)
chr1 (126-267)||(20242599-20242740)
chr1 (128-296)||(23066673-23066842)
chr1 (131-333)||(27280192-27280393)
chr1 (100-333)||(3706707-3706939)
chr1 (127-290)||(19778430-19778596)
chr1 (100-333)||(19961135-19961370)
chr1 (127-333)||(20941826-20942034)
chr1 (127-288)||(16883510-16883674)
chr1 (129-268)||(20838140-20838280)
chr1 (127-242)||(20824329-20824445)
chr1 (100-218)||(955010-955128)
chr1 (128-333)||(22448241-22448440)
chr1 (100-216)||(24108965-24109082)
chr1 (308-400)||(21987118-21987210)
chr1 (127-241)||(21732569-21732683)
chr1 (127-216)||(19666701-19666791)
chr1 (246-399)||(36614870-36615018)
chr1 (126-369)||(16371501-16371746)
chr1 (126-369)||(20852033-20852278)
chr1 (126-369)||(20858659-20858904)
chr1 (127-216)||(21664280-21664370)
chr1 (246-355)||(23195568-23195675)
chr1 (100-216)||(15316447-15316565)
chr1 (20-84)||(18711883-18711949)
chr1 (127-216)||(19853151-19853241)
chr1 (127-216)||(19859286-19859376)
chr1 (126-369)||(21705186-21705431)
chr1 (246-390)||(11156904-11157047)
chr1 (319-399)||(20848958-20849037)
chr1 (123-216)||(20086446-20086540)
chr1 (127-216)||(23195443-23195533)
chr1 (100-216)||(24079672-24079790)
chr1 (88-216)||(11157127-11157255)
chr1 (349-401)||(20108731-20108783)
chr1 (341-401)||(31927611-31927671)
chr1 (349-401)||(41312073-41312125)
chr1 (192-242)||(29535019-29535070)
chr1 (246-399)||(43088326-43088474)
chr1 (341-399)||(23712403-23712461)
chr1 (246-340)||(24079544-24079637)
chr1 (246-340)||(24109117-24109210)
chr1 (332-392)||(7792987-7793047)
chr1 (126-216)||(11140970-11141062)
chr1 (329-392)||(5380635-5380698)
chr1 (361-400)||(8682877-8682916)
chr1 (127-216)||(21410644-21410735)
chr1 (350-401)||(24959826-24959877)
chr1 (317-387)||(16669433-16669502)
chr1 (350-400)||(25092578-25092628)
chr1 (341-399)||(30491622-30491680)
chr1 (319-397)||(49327970-49328047)
chr1 (230-293)||(955116-955180)
chr1 (127-170)||(20849192-20849236)
chr1 (124-152)||(21698280-21698308)
chr1 (332-392)||(21734641-21734701)
chr1 (332-392)||(21745846-21745906)
chr1 (352-399)||(23195684-23195732)
chr1 (352-399)||(42096111-42096159)
[»] chr3 (112 HSPs)
chr3 (88-402)||(17156993-17157305)
chr3 (88-402)||(16802382-16802694)
chr3 (88-402)||(24191694-24192006)
chr3 (89-401)||(23174091-23174399)
chr3 (111-340)||(41456103-41456332)
chr3 (126-340)||(9532842-9533056)
chr3 (128-411)||(17243651-17243935)
chr3 (117-399)||(24123165-24123445)
chr3 (117-340)||(13968795-13969017)
chr3 (117-340)||(13974270-13974492)
chr3 (92-398)||(18899940-18900248)
chr3 (121-385)||(12304698-12304959)
chr3 (117-340)||(14084524-14084746)
chr3 (117-340)||(14089925-14090147)
chr3 (28-398)||(18888901-18889290)
chr3 (176-402)||(17190768-17190992)
chr3 (117-340)||(49399466-49399688)
chr3 (117-340)||(8583256-8583478)
chr3 (131-333)||(12200203-12200403)
chr3 (128-333)||(14544163-14544368)
chr3 (128-333)||(14652688-14652892)
chr3 (127-402)||(18913937-18914213)
chr3 (100-333)||(12961345-12961580)
chr3 (126-330)||(14292706-14292911)
chr3 (126-340)||(31690565-31690781)
chr3 (131-333)||(13909529-13909728)
chr3 (131-333)||(13939988-13940187)
chr3 (128-333)||(13203511-13203715)
chr3 (128-333)||(16382852-16383056)
chr3 (126-401)||(34852178-34852451)
chr3 (129-333)||(16838475-16838677)
chr3 (126-340)||(31943434-31943650)
chr3 (131-333)||(13946474-13946673)
chr3 (126-290)||(17199010-17199175)
chr3 (154-333)||(8742909-8743086)
chr3 (154-333)||(8761079-8761256)
chr3 (154-333)||(4677164-4677341)
chr3 (154-333)||(41175477-41175654)
chr3 (154-333)||(41180615-41180792)
chr3 (110-333)||(19443469-19443696)
chr3 (120-333)||(11964865-11965080)
chr3 (154-333)||(44775201-44775378)
chr3 (154-333)||(44780385-44780562)
chr3 (127-385)||(38312118-38312378)
chr3 (100-290)||(18719077-18719269)
chr3 (90-218)||(23173876-23174004)
chr3 (125-269)||(13313905-13314051)
chr3 (129-242)||(16829952-16830065)
chr3 (124-269)||(13303228-13303375)
chr3 (127-268)||(18129772-18129915)
chr3 (125-269)||(13324817-13324963)
chr3 (100-242)||(12255215-12255358)
chr3 (127-288)||(18136286-18136448)
chr3 (88-242)||(12479637-12479791)
chr3 (126-216)||(10597701-10597791)
chr3 (126-385)||(23371844-23372104)
chr3 (88-242)||(12362451-12362605)
chr3 (126-216)||(18756930-18757020)
chr3 (131-242)||(12355944-12356056)
chr3 (207-333)||(12363445-12363572)
chr3 (127-237)||(15518591-15518703)
chr3 (329-401)||(42109046-42109118)
chr3 (126-385)||(14764098-14764358)
chr3 (126-385)||(51300051-51300311)
chr3 (230-333)||(23173786-23173888)
chr3 (126-216)||(17496239-17496330)
chr3 (100-216)||(12419511-12419629)
chr3 (128-216)||(11305740-11305829)
chr3 (319-399)||(8374077-8374156)
chr3 (126-288)||(10390365-10390531)
chr3 (126-288)||(10415474-10415640)
chr3 (126-288)||(10422144-10422310)
chr3 (89-216)||(11850594-11850721)
chr3 (107-216)||(13692040-13692151)
chr3 (203-333)||(16830050-16830178)
chr3 (192-389)||(10553818-10554014)
chr3 (329-391)||(14289150-14289212)
chr3 (126-357)||(20249104-20249337)
chr3 (28-90)||(18900266-18900330)
chr3 (126-288)||(12034315-12034481)
chr3 (350-401)||(9785-9836)
chr3 (127-216)||(11644786-11644877)
chr3 (273-340)||(11850781-11850847)
chr3 (89-152)||(17512726-17512788)
chr3 (319-385)||(3802486-3802551)
chr3 (88-216)||(12152971-12153100)
chr3 (363-401)||(15012240-15012278)
chr3 (2-90)||(17243459-17243549)
chr3 (319-392)||(30597011-30597083)
chr3 (333-390)||(46723597-46723654)
chr3 (126-216)||(2270227-2270319)
chr3 (349-401)||(13037185-13037237)
chr3 (317-369)||(17130661-17130713)
chr3 (246-288)||(10597826-10597866)
chr3 (100-154)||(12255748-12255803)
chr3 (246-288)||(12419436-12419476)
chr3 (344-399)||(14569724-14569779)
chr3 (361-400)||(15232021-15232060)
chr3 (361-400)||(15237889-15237928)
chr3 (341-399)||(15935185-15935243)
chr3 (341-399)||(16823937-16823995)
chr3 (317-358)||(14864763-14864804)
chr3 (352-399)||(8583502-8583550)
chr3 (317-369)||(12034508-12034560)
chr3 (352-399)||(13969069-13969117)
chr3 (352-399)||(13974544-13974592)
chr3 (126-173)||(14864949-14864997)
chr3 (319-399)||(15374615-15374694)
chr3 (126-173)||(19235968-19236016)
chr3 (317-385)||(19236167-19236233)
chr3 (349-401)||(24284653-24284705)
chr3 (319-399)||(54519977-54520056)
[»] scaffold1299 (1 HSPs)
scaffold1299 (3-402)||(14-412)
[»] chr7 (119 HSPs)
chr7 (3-395)||(20328094-20328487)
chr7 (3-402)||(11390173-11390571)
chr7 (3-393)||(11383685-11384074)
chr7 (126-402)||(16676124-16676398)
chr7 (103-411)||(21231981-21232288)
chr7 (126-402)||(17650361-17650634)
chr7 (126-398)||(18606801-18607072)
chr7 (126-340)||(13006299-13006513)
chr7 (126-340)||(14421347-14421561)
chr7 (121-340)||(13123937-13124155)
chr7 (117-340)||(4279956-4280178)
chr7 (121-385)||(11302801-11303062)
chr7 (117-340)||(19616288-19616510)
chr7 (129-385)||(23665802-23666055)
chr7 (100-340)||(12591580-12591819)
chr7 (121-340)||(12710866-12711084)
chr7 (129-385)||(29795679-29795932)
chr7 (129-385)||(29799498-29799751)
chr7 (121-340)||(13742498-13742716)
chr7 (89-333)||(6411821-6412065)
chr7 (100-333)||(14281589-14281822)
chr7 (124-288)||(11220079-11220245)
chr7 (128-333)||(35962709-35962914)
chr7 (128-333)||(15338826-15339030)
chr7 (128-333)||(15723188-15723392)
chr7 (126-333)||(1612623-1612830)
chr7 (128-331)||(19599844-19600046)
chr7 (131-333)||(23201479-23201679)
chr7 (131-333)||(23507606-23507806)
chr7 (128-333)||(15710964-15711168)
chr7 (132-333)||(16109044-16109243)
chr7 (129-333)||(14431989-14432192)
chr7 (131-333)||(806973-807174)
chr7 (154-333)||(11631940-11632117)
chr7 (154-333)||(18049230-18049407)
chr7 (154-333)||(18055709-18055886)
chr7 (154-333)||(20579941-20580118)
chr7 (126-385)||(147016-147277)
chr7 (126-333)||(3289749-3289956)
chr7 (129-260)||(14128244-14128374)
chr7 (100-385)||(31154316-31154600)
chr7 (129-218)||(36306032-36306121)
chr7 (126-369)||(14320533-14320778)
chr7 (100-216)||(18958367-18958484)
chr7 (308-401)||(19145498-19145591)
chr7 (308-401)||(20744897-20744990)
chr7 (126-358)||(14565683-14565917)
chr7 (306-398)||(13678217-13678308)
chr7 (126-385)||(18871815-18872075)
chr7 (126-216)||(37244273-37244363)
chr7 (100-216)||(15085861-15085978)
chr7 (100-216)||(26289706-26289823)
chr7 (308-392)||(14266155-14266239)
chr7 (126-385)||(15166723-15166984)
chr7 (100-216)||(14178947-14179065)
chr7 (126-369)||(20907328-20907573)
chr7 (308-401)||(19151800-19151893)
chr7 (308-401)||(20751199-20751292)
chr7 (126-385)||(3858324-3858583)
chr7 (308-392)||(14255879-14255963)
chr7 (100-214)||(16952175-16952290)
chr7 (126-369)||(2965895-2966140)
chr7 (126-218)||(832950-833043)
chr7 (126-218)||(1198130-1198223)
chr7 (88-242)||(16187655-16187810)
chr7 (320-392)||(46624783-46624855)
chr7 (100-216)||(3327920-3328038)
chr7 (126-369)||(16008048-16008293)
chr7 (126-214)||(836993-837082)
chr7 (126-214)||(1202173-1202262)
chr7 (126-385)||(2464262-2464521)
chr7 (127-218)||(14945836-14945928)
chr7 (127-218)||(15373429-15373521)
chr7 (28-90)||(21231847-21231910)
chr7 (350-400)||(41783304-41783354)
chr7 (100-152)||(14169473-14169525)
chr7 (246-340)||(15086013-15086105)
chr7 (246-355)||(3327778-3327885)
chr7 (246-355)||(32771473-32771580)
chr7 (127-216)||(46682157-46682248)
chr7 (102-152)||(12547358-12547408)
chr7 (230-291)||(36306109-36306171)
chr7 (341-399)||(45185384-45185442)
chr7 (333-402)||(11312224-11312293)
chr7 (349-398)||(12694515-12694564)
chr7 (88-216)||(13678447-13678575)
chr7 (317-358)||(16089996-16090037)
chr7 (317-358)||(29182212-29182253)
chr7 (361-401)||(12202268-12202308)
chr7 (361-401)||(15689766-15689806)
chr7 (361-401)||(15697359-15697399)
chr7 (361-401)||(15704339-15704379)
chr7 (332-392)||(16575613-16575673)
chr7 (332-392)||(16589989-16590049)
chr7 (248-340)||(37244400-37244491)
chr7 (361-400)||(12208882-12208921)
chr7 (350-401)||(14348509-14348560)
chr7 (230-288)||(14945916-14945975)
chr7 (127-216)||(15104307-15104398)
chr7 (230-288)||(15373509-15373568)
chr7 (350-401)||(16668748-16668799)
chr7 (353-392)||(23442194-23442233)
chr7 (341-399)||(12547098-12547156)
chr7 (349-399)||(16476334-16476384)
chr7 (350-400)||(42041238-42041288)
chr7 (127-180)||(46348719-46348773)
chr7 (126-236)||(10897152-10897265)
chr7 (333-390)||(11308928-11308985)
chr7 (123-152)||(15142385-15142414)
chr7 (363-400)||(17643131-17643168)
chr7 (248-288)||(26289860-26289898)
chr7 (126-170)||(46625014-46625059)
chr7 (127-170)||(11857669-11857713)
chr7 (124-152)||(14581412-14581440)
chr7 (319-399)||(15104506-15104585)
chr7 (126-173)||(16090190-16090238)
chr7 (361-401)||(21519484-21519524)
chr7 (126-173)||(29182011-29182059)
chr7 (123-151)||(41783042-41783070)
[»] scaffold0077 (3 HSPs)
scaffold0077 (88-395)||(4551-4856)
scaffold0077 (127-333)||(23767-23975)
scaffold0077 (127-333)||(18136-18344)
[»] scaffold0476 (1 HSPs)
scaffold0476 (88-402)||(4232-4544)
[»] chr4 (70 HSPs)
chr4 (126-398)||(18212074-18212344)
chr4 (100-402)||(15406843-15407144)
chr4 (100-384)||(11847003-11847285)
chr4 (121-385)||(15533735-15533996)
chr4 (121-340)||(8046863-8047081)
chr4 (100-411)||(14485432-14485745)
chr4 (100-330)||(14484432-14484662)
chr4 (131-333)||(635739-635940)
chr4 (100-333)||(16156630-16156867)
chr4 (126-401)||(4831057-4831330)
chr4 (126-401)||(4834352-4834625)
chr4 (128-333)||(23121599-23121804)
chr4 (100-338)||(11171202-11171440)
chr4 (100-288)||(15324919-15325108)
chr4 (128-333)||(43284868-43285072)
chr4 (100-296)||(17000111-17000308)
chr4 (126-290)||(26077681-26077847)
chr4 (129-333)||(20940260-20940463)
chr4 (89-385)||(14910534-14910831)
chr4 (121-290)||(14048242-14048414)
chr4 (127-333)||(14556050-14556260)
chr4 (154-333)||(53748750-53748927)
chr4 (128-290)||(14062951-14063116)
chr4 (154-333)||(41799951-41800128)
chr4 (154-333)||(42701226-42701403)
chr4 (154-333)||(51602072-51602249)
chr4 (154-333)||(51607953-51608130)
chr4 (127-333)||(41529054-41529263)
chr4 (100-288)||(1651000-1651193)
chr4 (100-288)||(27905254-27905446)
chr4 (126-268)||(2585138-2585282)
chr4 (160-333)||(16152484-16152661)
chr4 (110-333)||(40908583-40908809)
chr4 (100-212)||(37881521-37881634)
chr4 (192-288)||(14048121-14048219)
chr4 (253-399)||(10977120-10977265)
chr4 (100-216)||(13453847-13453964)
chr4 (205-290)||(16221269-16221356)
chr4 (319-387)||(13886612-13886680)
chr4 (126-242)||(30146857-30146975)
chr4 (319-392)||(14821297-14821370)
chr4 (341-401)||(15546494-15546554)
chr4 (126-186)||(49051081-49051141)
chr4 (250-355)||(13452204-13452307)
chr4 (319-377)||(15306957-15307015)
chr4 (349-401)||(27849673-27849725)
chr4 (127-216)||(12931958-12932049)
chr4 (100-170)||(17176528-17176599)
chr4 (319-393)||(15244039-15244113)
chr4 (333-383)||(22726056-22726106)
chr4 (356-401)||(13444135-13444180)
chr4 (317-358)||(16147934-16147975)
chr4 (319-399)||(20889260-20889339)
chr4 (126-216)||(53905283-53905375)
chr4 (246-399)||(46044920-46045068)
chr4 (341-399)||(13899812-13899870)
chr4 (341-399)||(18261226-18261284)
chr4 (341-399)||(18271191-18271249)
chr4 (319-385)||(36037462-36037527)
chr4 (360-401)||(30237673-30237714)
chr4 (127-170)||(15360792-15360836)
chr4 (126-173)||(16147733-16147781)
chr4 (100-152)||(18166228-18166280)
chr4 (88-152)||(18261483-18261546)
chr4 (88-152)||(18271448-18271511)
chr4 (319-399)||(20894879-20894958)
chr4 (319-399)||(31664945-31665024)
chr4 (319-399)||(41404825-41404904)
chr4 (319-399)||(42220317-42220396)
chr4 (319-399)||(49548702-49548781)
[»] chr6 (88 HSPs)
chr6 (88-395)||(21566120-21566425)
chr6 (126-340)||(12167230-12167444)
chr6 (126-340)||(19286139-19286353)
chr6 (121-385)||(12941749-12942010)
chr6 (121-340)||(29615165-29615383)
chr6 (126-340)||(19877323-19877537)
chr6 (126-340)||(19883099-19883313)
chr6 (88-340)||(19786805-19787057)
chr6 (117-340)||(24562275-24562497)
chr6 (129-385)||(28290182-28290435)
chr6 (109-340)||(25470645-25470875)
chr6 (121-340)||(34647618-34647836)
chr6 (126-334)||(23837579-23837787)
chr6 (121-340)||(34640944-34641162)
chr6 (20-395)||(24513673-24514066)
chr6 (100-252)||(18788439-18788591)
chr6 (100-252)||(18799419-18799571)
chr6 (100-288)||(19588525-19588715)
chr6 (128-333)||(19726606-19726810)
chr6 (100-329)||(22906969-22907198)
chr6 (126-253)||(19439782-19439909)
chr6 (131-333)||(33682180-33682380)
chr6 (128-335)||(1592757-1592963)
chr6 (100-290)||(8760370-8760562)
chr6 (100-259)||(11289547-11289705)
chr6 (100-288)||(14375253-14375444)
chr6 (128-293)||(937655-937820)
chr6 (154-333)||(23835057-23835234)
chr6 (100-288)||(14724409-14724600)
chr6 (127-333)||(2708368-2708577)
chr6 (100-266)||(14616213-14616382)
chr6 (126-401)||(29416435-29416718)
chr6 (154-333)||(14033142-14033319)
chr6 (100-333)||(19300611-19300846)
chr6 (131-333)||(28359831-28360032)
chr6 (131-333)||(27562514-27562715)
chr6 (100-242)||(8768117-8768260)
chr6 (127-288)||(19818944-19819106)
chr6 (100-385)||(15457414-15457697)
chr6 (100-385)||(15464009-15464292)
chr6 (128-288)||(21724733-21724893)
chr6 (89-288)||(14995882-14996084)
chr6 (100-358)||(31251344-31251604)
chr6 (125-333)||(14581825-14582034)
chr6 (100-216)||(23234869-23234986)
chr6 (246-399)||(18785996-18786148)
chr6 (88-216)||(17414114-17414242)
chr6 (329-401)||(25749639-25749711)
chr6 (126-385)||(4476314-4476574)
chr6 (126-385)||(21365435-21365695)
chr6 (126-385)||(23969417-23969677)
chr6 (126-216)||(26418633-26418723)
chr6 (292-361)||(18799357-18799425)
chr6 (100-216)||(10582781-10582899)
chr6 (319-393)||(19472490-19472564)
chr6 (127-216)||(23233377-23233467)
chr6 (319-393)||(25395940-25396014)
chr6 (89-216)||(5290073-5290200)
chr6 (20-90)||(9186621-9186693)
chr6 (292-360)||(18788378-18788445)
chr6 (341-401)||(23105117-23105177)
chr6 (246-399)||(23021420-23021568)
chr6 (88-216)||(19451403-19451531)
chr6 (126-369)||(20008847-20009093)
chr6 (350-401)||(22346491-22346542)
chr6 (350-401)||(29265387-29265438)
chr6 (298-340)||(11283987-11284029)
chr6 (127-180)||(19467977-19468031)
chr6 (88-216)||(25396121-25396250)
chr6 (319-399)||(12447336-12447415)
chr6 (319-399)||(17894661-17894740)
chr6 (126-180)||(19472292-19472348)
chr6 (317-369)||(20011100-20011152)
chr6 (246-340)||(5290235-5290326)
chr6 (361-400)||(18137381-18137420)
chr6 (127-216)||(24720716-24720807)
chr6 (246-288)||(26418758-26418798)
chr6 (349-399)||(18316178-18316228)
chr6 (341-399)||(22798703-22798761)
chr6 (246-334)||(23235021-23235107)
chr6 (349-399)||(24412487-24412537)
chr6 (100-152)||(14132983-14133036)
chr6 (246-385)||(25347031-25347167)
chr6 (126-173)||(9099971-9100019)
chr6 (317-385)||(9100170-9100236)
chr6 (350-402)||(21469625-21469677)
chr6 (317-385)||(29096755-29096821)
chr6 (126-173)||(29096972-29097020)
[»] scaffold0025 (4 HSPs)
scaffold0025 (88-402)||(15389-15701)
scaffold0025 (100-268)||(71154-71322)
scaffold0025 (319-399)||(76649-76728)
scaffold0025 (126-215)||(76837-76928)
[»] scaffold0337 (1 HSPs)
scaffold0337 (126-398)||(10229-10499)
[»] scaffold0247 (1 HSPs)
scaffold0247 (88-384)||(10150-10443)
[»] scaffold0124 (8 HSPs)
scaffold0124 (89-385)||(36751-37045)
scaffold0124 (192-411)||(44054-44273)
scaffold0124 (92-242)||(43929-44080)
scaffold0124 (167-284)||(40549-40664)
scaffold0124 (100-216)||(9344-9463)
scaffold0124 (127-216)||(45014-45105)
scaffold0124 (20-84)||(43837-43904)
scaffold0124 (288-333)||(8493-8538)
[»] chr5 (85 HSPs)
chr5 (117-402)||(22439687-22439970)
chr5 (123-398)||(19510935-19511209)
chr5 (100-340)||(1857448-1857687)
chr5 (100-340)||(21675416-21675655)
chr5 (121-385)||(37805282-37805543)
chr5 (126-340)||(23527441-23527656)
chr5 (129-385)||(9775416-9775669)
chr5 (92-385)||(23112673-23112965)
chr5 (100-333)||(20937594-20937827)
chr5 (100-333)||(22312773-22313005)
chr5 (128-333)||(758224-758427)
chr5 (131-333)||(17264770-17264971)
chr5 (131-333)||(22175014-22175216)
chr5 (131-333)||(17271252-17271453)
chr5 (100-268)||(22007865-22008035)
chr5 (128-296)||(22509142-22509310)
chr5 (126-401)||(23538736-23539009)
chr5 (131-333)||(21678242-21678443)
chr5 (126-401)||(10816709-10816982)
chr5 (127-385)||(34828977-34829236)
chr5 (100-264)||(6728201-6728368)
chr5 (127-288)||(6404465-6404628)
chr5 (90-333)||(22232569-22232813)
chr5 (126-385)||(28371393-28371653)
chr5 (126-385)||(38145722-38145980)
chr5 (306-402)||(18409184-18409279)
chr5 (126-385)||(42960031-42960289)
chr5 (126-385)||(22336056-22336316)
chr5 (126-238)||(18408968-18409081)
chr5 (127-216)||(21829622-21829712)
chr5 (100-216)||(20843263-20843381)
chr5 (126-385)||(22339594-22339854)
chr5 (126-385)||(22749702-22749963)
chr5 (246-399)||(19801961-19802109)
chr5 (126-369)||(19235811-19236056)
chr5 (126-369)||(22466690-22466935)
chr5 (126-216)||(27635844-27635934)
chr5 (126-288)||(20819173-20819339)
chr5 (126-288)||(20826273-20826439)
chr5 (89-216)||(24668923-24669050)
chr5 (89-216)||(24738692-24738819)
chr5 (89-216)||(24751461-24751588)
chr5 (246-340)||(27635969-27636061)
chr5 (100-216)||(427337-427455)
chr5 (349-402)||(21574219-21574272)
chr5 (349-401)||(10035042-10035094)
chr5 (126-173)||(20772078-20772126)
chr5 (332-392)||(21494871-21494931)
chr5 (341-401)||(21888474-21888534)
chr5 (246-399)||(19362533-19362681)
chr5 (273-340)||(24751648-24751714)
chr5 (350-401)||(25013521-25013572)
chr5 (126-369)||(22460066-22460311)
chr5 (333-390)||(24617894-24617951)
chr5 (333-390)||(24714125-24714182)
chr5 (333-390)||(24747153-24747210)
chr5 (126-173)||(20780853-20780901)
chr5 (319-399)||(23076436-23076515)
chr5 (319-399)||(23081884-23081963)
chr5 (100-152)||(23561550-23561602)
chr5 (319-399)||(24057535-24057614)
chr5 (126-173)||(37599254-37599302)
chr5 (317-385)||(37599454-37599521)
chr5 (350-401)||(17023086-17023137)
chr5 (273-340)||(24669110-24669176)
chr5 (273-340)||(24738879-24738945)
chr5 (317-387)||(28890519-28890588)
chr5 (317-387)||(28897223-28897292)
chr5 (317-387)||(28910423-28910492)
chr5 (317-387)||(28925691-28925760)
chr5 (317-387)||(28932114-28932183)
chr5 (317-387)||(28933618-28933687)
chr5 (317-387)||(28946818-28946887)
chr5 (360-401)||(15194241-15194282)
chr5 (349-398)||(18818836-18818885)
chr5 (20-67)||(18408795-18408843)
chr5 (319-399)||(26650339-26650416)
chr5 (319-399)||(26921924-26922001)
chr5 (126-173)||(28896999-28897047)
chr5 (126-173)||(28910247-28910295)
chr5 (126-173)||(28931939-28931987)
chr5 (126-173)||(28933442-28933490)
chr5 (126-173)||(28946642-28946690)
chr5 (319-399)||(37565973-37566052)
chr5 (319-399)||(39609017-39609096)
[»] scaffold0107 (2 HSPs)
scaffold0107 (103-402)||(41564-41862)
scaffold0107 (2-90)||(41413-41503)
[»] scaffold0154 (2 HSPs)
scaffold0154 (100-411)||(29671-29979)
scaffold0154 (28-74)||(30044-30090)
[»] scaffold0634 (1 HSPs)
scaffold0634 (119-384)||(2516-2779)
[»] scaffold0020 (2 HSPs)
scaffold0020 (128-411)||(102900-103183)
scaffold0020 (350-401)||(177809-177860)
[»] scaffold0004 (6 HSPs)
scaffold0004 (128-402)||(115667-115941)
scaffold0004 (100-288)||(326816-327007)
scaffold0004 (100-288)||(321107-321298)
scaffold0004 (319-393)||(129858-129932)
scaffold0004 (126-216)||(129659-129751)
scaffold0004 (361-401)||(383332-383372)
[»] scaffold0235 (3 HSPs)
scaffold0235 (131-411)||(16914-17193)
scaffold0235 (2-90)||(15072-15162)
scaffold0235 (2-90)||(15763-15853)
[»] scaffold0026 (7 HSPs)
scaffold0026 (121-384)||(12842-13104)
scaffold0026 (130-333)||(63168-63370)
scaffold0026 (126-290)||(124441-124606)
scaffold0026 (126-385)||(110142-110402)
scaffold0026 (350-392)||(35487-35529)
scaffold0026 (350-392)||(24617-24659)
scaffold0026 (360-392)||(118045-118077)
[»] scaffold0029 (4 HSPs)
scaffold0029 (121-340)||(110751-110969)
scaffold0029 (273-340)||(116786-116853)
scaffold0029 (126-385)||(92102-92361)
scaffold0029 (126-385)||(97828-98087)
[»] scaffold0106 (3 HSPs)
scaffold0106 (117-340)||(38394-38616)
scaffold0106 (127-261)||(46728-46864)
scaffold0106 (127-261)||(51001-51137)
[»] scaffold0076 (5 HSPs)
scaffold0076 (117-340)||(30107-30329)
scaffold0076 (117-340)||(35508-35730)
scaffold0076 (100-327)||(51644-51872)
scaffold0076 (352-399)||(30353-30401)
scaffold0076 (352-399)||(35754-35802)
[»] scaffold0028 (6 HSPs)
scaffold0028 (117-340)||(46941-47163)
scaffold0028 (126-340)||(52355-52568)
scaffold0028 (88-216)||(65086-65215)
scaffold0028 (352-402)||(64888-64938)
scaffold0028 (350-392)||(92888-92930)
scaffold0028 (352-399)||(47187-47234)
[»] scaffold0011 (11 HSPs)
scaffold0011 (117-340)||(174523-174745)
scaffold0011 (126-338)||(152356-152567)
scaffold0011 (127-333)||(258491-258700)
scaffold0011 (127-333)||(197409-197618)
scaffold0011 (127-216)||(252004-252094)
scaffold0011 (127-216)||(154248-154338)
scaffold0011 (131-216)||(147127-147213)
scaffold0011 (127-216)||(75251-75342)
scaffold0011 (361-401)||(21986-22026)
scaffold0011 (319-399)||(56933-57012)
scaffold0011 (352-399)||(174769-174817)
[»] scaffold0117 (1 HSPs)
scaffold0117 (121-340)||(9598-9816)
[»] scaffold0226 (1 HSPs)
scaffold0226 (89-333)||(5148-5392)
[»] scaffold0001 (6 HSPs)
scaffold0001 (129-340)||(174535-174746)
scaffold0001 (172-334)||(489126-489288)
scaffold0001 (127-287)||(95894-96055)
scaffold0001 (126-369)||(493927-494170)
scaffold0001 (329-401)||(524575-524647)
scaffold0001 (246-399)||(178938-179086)
[»] scaffold1615 (1 HSPs)
scaffold1615 (131-411)||(392-671)
[»] scaffold0058 (1 HSPs)
scaffold0058 (128-295)||(17514-17682)
[»] scaffold0239 (2 HSPs)
scaffold0239 (100-333)||(14441-14673)
scaffold0239 (128-296)||(7186-7354)
[»] scaffold0461 (6 HSPs)
scaffold0461 (192-411)||(1116-1336)
scaffold0461 (192-411)||(8052-8272)
scaffold0461 (92-242)||(991-1142)
scaffold0461 (92-242)||(7927-8078)
scaffold0461 (20-84)||(900-966)
scaffold0461 (20-84)||(7836-7902)
[»] scaffold0535 (1 HSPs)
scaffold0535 (126-333)||(6001-6208)
[»] scaffold0693 (1 HSPs)
scaffold0693 (192-411)||(1960-2181)
[»] scaffold0323 (1 HSPs)
scaffold0323 (100-288)||(7293-7482)
[»] scaffold0023 (3 HSPs)
scaffold0023 (100-268)||(20462-20630)
scaffold0023 (192-290)||(156804-156901)
scaffold0023 (100-180)||(153285-153365)
[»] scaffold0114 (2 HSPs)
scaffold0114 (128-333)||(41931-42135)
scaffold0114 (127-216)||(47790-47881)
[»] scaffold0097 (1 HSPs)
scaffold0097 (100-288)||(27906-28096)
[»] scaffold0067 (3 HSPs)
scaffold0067 (128-333)||(56418-56623)
scaffold0067 (128-333)||(47384-47589)
scaffold0067 (128-333)||(62804-63009)
[»] scaffold0249 (3 HSPs)
scaffold0249 (127-411)||(7778-8064)
scaffold0249 (100-385)||(14741-15025)
scaffold0249 (330-401)||(6968-7039)
[»] scaffold0222 (2 HSPs)
scaffold0222 (128-333)||(4978-5184)
scaffold0222 (319-392)||(27935-28008)
[»] scaffold0811 (1 HSPs)
scaffold0811 (206-340)||(4-138)
[»] scaffold0348 (4 HSPs)
scaffold0348 (126-345)||(2907-3128)
scaffold0348 (127-333)||(1696-1904)
scaffold0348 (128-333)||(15451-15641)
scaffold0348 (126-173)||(8465-8513)
[»] scaffold0034 (6 HSPs)
scaffold0034 (126-340)||(17371-17587)
scaffold0034 (100-340)||(10048-10291)
scaffold0034 (100-333)||(72229-72464)
scaffold0034 (315-378)||(35884-35947)
scaffold0034 (127-216)||(400-489)
scaffold0034 (127-216)||(6559-6648)
[»] scaffold0021 (2 HSPs)
scaffold0021 (128-333)||(141326-141529)
scaffold0021 (126-288)||(146611-146775)
[»] scaffold0243 (2 HSPs)
scaffold0243 (127-333)||(16017-16225)
scaffold0243 (127-290)||(7997-8162)
[»] scaffold1584 (1 HSPs)
scaffold1584 (126-355)||(298-529)
[»] scaffold0220 (1 HSPs)
scaffold0220 (126-333)||(10341-10548)
[»] scaffold0071 (1 HSPs)
scaffold0071 (132-333)||(50948-51148)
[»] scaffold0005 (3 HSPs)
scaffold0005 (131-333)||(265100-265300)
scaffold0005 (131-333)||(258674-258874)
scaffold0005 (319-392)||(18339-18412)
[»] scaffold0015 (1 HSPs)
scaffold0015 (88-288)||(171741-171945)
[»] scaffold0506 (1 HSPs)
scaffold0506 (127-290)||(8453-8619)
[»] scaffold0008 (1 HSPs)
scaffold0008 (100-268)||(34842-35013)
[»] scaffold0342 (1 HSPs)
scaffold0342 (100-333)||(16834-17071)
[»] scaffold0483 (1 HSPs)
scaffold0483 (100-269)||(11884-12055)
[»] scaffold0574 (1 HSPs)
scaffold0574 (100-288)||(5845-6035)
[»] scaffold1773 (1 HSPs)
scaffold1773 (121-314)||(1-183)
[»] scaffold0063 (2 HSPs)
scaffold0063 (128-288)||(14052-14212)
scaffold0063 (128-293)||(24248-24413)
[»] scaffold0430 (1 HSPs)
scaffold0430 (128-295)||(14544-14710)
[»] scaffold0395 (2 HSPs)
scaffold0395 (246-399)||(4217-4368)
scaffold0395 (350-399)||(10151-10200)
[»] scaffold1427 (2 HSPs)
scaffold1427 (117-288)||(881-1055)
scaffold1427 (245-399)||(559-707)
[»] scaffold0261 (3 HSPs)
scaffold0261 (100-269)||(24444-24615)
scaffold0261 (88-152)||(10588-10651)
scaffold0261 (88-152)||(18767-18830)
[»] scaffold0301 (2 HSPs)
scaffold0301 (100-288)||(13358-13548)
scaffold0301 (100-216)||(3326-3444)
[»] scaffold0074 (1 HSPs)
scaffold0074 (130-255)||(16972-17096)
[»] scaffold0126 (1 HSPs)
scaffold0126 (100-242)||(44282-44426)
[»] scaffold0072 (1 HSPs)
scaffold0072 (127-255)||(55939-56069)
[»] scaffold0065 (1 HSPs)
scaffold0065 (126-290)||(27737-27902)
[»] scaffold0610 (1 HSPs)
scaffold0610 (128-242)||(5638-5753)
[»] scaffold0089 (2 HSPs)
scaffold0089 (246-398)||(1830-1981)
scaffold0089 (126-180)||(2098-2153)
[»] scaffold1913 (1 HSPs)
scaffold1913 (147-237)||(4-94)
[»] scaffold0706 (2 HSPs)
scaffold0706 (100-242)||(3270-3415)
scaffold0706 (246-290)||(3409-3453)
[»] scaffold0203 (2 HSPs)
scaffold0203 (194-288)||(2376-2471)
scaffold0203 (100-242)||(17046-17190)
[»] scaffold0167 (2 HSPs)
scaffold0167 (127-288)||(6984-7147)
scaffold0167 (341-401)||(19730-19789)
[»] scaffold0010 (2 HSPs)
scaffold0010 (127-333)||(44086-44294)
scaffold0010 (127-333)||(49152-49360)
[»] scaffold0317 (2 HSPs)
scaffold0317 (306-398)||(110-201)
scaffold0317 (88-216)||(340-468)
[»] scaffold1061 (1 HSPs)
scaffold1061 (319-402)||(1217-1299)
[»] scaffold0037 (1 HSPs)
scaffold0037 (308-392)||(97493-97577)
[»] scaffold0554 (1 HSPs)
scaffold0554 (246-399)||(39-190)
[»] scaffold0139 (2 HSPs)
scaffold0139 (246-398)||(16137-16288)
scaffold0139 (126-180)||(15966-16021)
[»] scaffold0544 (1 HSPs)
scaffold0544 (126-385)||(2817-3077)
[»] scaffold0352 (1 HSPs)
scaffold0352 (319-393)||(4478-4552)
[»] scaffold0156 (1 HSPs)
scaffold0156 (100-216)||(25703-25821)
[»] scaffold0098 (1 HSPs)
scaffold0098 (192-334)||(52671-52815)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-242)||(370477-370594)
[»] scaffold0556 (2 HSPs)
scaffold0556 (100-214)||(4949-5065)
scaffold0556 (349-401)||(10833-10885)
[»] scaffold0169 (1 HSPs)
scaffold0169 (329-401)||(5857-5929)
[»] scaffold0049 (1 HSPs)
scaffold0049 (308-392)||(43049-43133)
[»] scaffold1726 (2 HSPs)
scaffold1726 (126-217)||(344-435)
scaffold1726 (246-288)||(270-310)
[»] scaffold0078 (1 HSPs)
scaffold0078 (103-216)||(17373-17488)
[»] scaffold0061 (1 HSPs)
scaffold0061 (128-218)||(57154-57245)
[»] scaffold0017 (1 HSPs)
scaffold0017 (128-218)||(141388-141479)
[»] scaffold0232 (1 HSPs)
scaffold0232 (319-393)||(19565-19639)
[»] scaffold0192 (3 HSPs)
scaffold0192 (127-216)||(6758-6848)
scaffold0192 (350-401)||(20676-20727)
scaffold0192 (350-401)||(31343-31394)
[»] scaffold0664 (1 HSPs)
scaffold0664 (100-180)||(2284-2365)
[»] scaffold0377 (3 HSPs)
scaffold0377 (126-218)||(7344-7437)
scaffold0377 (126-200)||(3323-3398)
scaffold0377 (230-333)||(7253-7356)
[»] scaffold0298 (2 HSPs)
scaffold0298 (100-216)||(8356-8475)
scaffold0298 (100-216)||(18440-18559)
[»] scaffold0094 (2 HSPs)
scaffold0094 (319-393)||(51071-51145)
scaffold0094 (129-216)||(51252-51341)
[»] scaffold1684 (1 HSPs)
scaffold1684 (349-402)||(1419-1472)
[»] scaffold0022 (2 HSPs)
scaffold0022 (127-242)||(38636-38752)
scaffold0022 (127-242)||(136696-136812)
[»] scaffold0865 (1 HSPs)
scaffold0865 (350-401)||(113-164)
[»] scaffold0178 (1 HSPs)
scaffold0178 (329-392)||(25440-25503)
[»] scaffold0751 (1 HSPs)
scaffold0751 (101-170)||(567-637)
[»] scaffold0516 (1 HSPs)
scaffold0516 (246-398)||(6062-6211)
[»] scaffold0405 (1 HSPs)
scaffold0405 (127-216)||(3267-3357)
[»] scaffold0334 (1 HSPs)
scaffold0334 (101-170)||(8640-8710)
[»] scaffold0327 (1 HSPs)
scaffold0327 (350-400)||(1718-1768)
[»] scaffold0133 (1 HSPs)
scaffold0133 (350-400)||(27126-27176)
[»] scaffold0609 (1 HSPs)
scaffold0609 (316-369)||(9-62)
[»] scaffold0120 (2 HSPs)
scaffold0120 (100-152)||(5004-5056)
scaffold0120 (126-216)||(5094-5186)
[»] scaffold0053 (4 HSPs)
scaffold0053 (329-401)||(61297-61368)
scaffold0053 (317-358)||(80594-80635)
scaffold0053 (329-401)||(73085-73156)
scaffold0053 (126-173)||(80393-80441)
[»] scaffold0720 (2 HSPs)
scaffold0720 (253-358)||(4264-4370)
scaffold0720 (126-173)||(4161-4209)
[»] scaffold0575 (2 HSPs)
scaffold0575 (349-392)||(193-236)
scaffold0575 (350-401)||(8473-8524)
[»] scaffold0205 (1 HSPs)
scaffold0205 (127-216)||(27358-27449)
[»] scaffold0121 (1 HSPs)
scaffold0121 (100-216)||(9357-9476)
[»] scaffold0104 (5 HSPs)
scaffold0104 (329-392)||(41808-41871)
scaffold0104 (246-355)||(26069-26176)
scaffold0104 (127-216)||(26211-26302)
scaffold0104 (246-355)||(27451-27558)
scaffold0104 (127-216)||(27593-27684)
[»] scaffold1290 (2 HSPs)
scaffold1290 (341-399)||(1460-1518)
scaffold1290 (123-152)||(1189-1218)
[»] scaffold0924 (1 HSPs)
scaffold0924 (341-399)||(2176-2234)
[»] scaffold0371 (2 HSPs)
scaffold0371 (341-399)||(1105-1163)
scaffold0371 (361-402)||(7320-7361)
[»] scaffold0108 (1 HSPs)
scaffold0108 (341-399)||(45429-45487)
[»] scaffold0102 (3 HSPs)
scaffold0102 (341-399)||(29728-29786)
scaffold0102 (127-216)||(44702-44792)
scaffold0102 (246-290)||(38466-38508)
[»] scaffold0007 (1 HSPs)
scaffold0007 (341-399)||(207977-208035)
[»] scaffold0420 (1 HSPs)
scaffold0420 (356-401)||(4951-4996)
[»] scaffold0326 (2 HSPs)
scaffold0326 (329-402)||(5594-5665)
scaffold0326 (89-216)||(323-450)
[»] scaffold1469 (1 HSPs)
scaffold1469 (126-173)||(463-511)
[»] scaffold0462 (1 HSPs)
scaffold0462 (349-401)||(9493-9545)
[»] scaffold0201 (1 HSPs)
scaffold0201 (349-401)||(26159-26211)
[»] scaffold0131 (1 HSPs)
scaffold0131 (126-288)||(13-179)
[»] scaffold0057 (1 HSPs)
scaffold0057 (349-401)||(2178-2230)
[»] scaffold0019 (1 HSPs)
scaffold0019 (319-399)||(143897-143976)
[»] scaffold2016 (1 HSPs)
scaffold2016 (349-392)||(952-995)
[»] scaffold1979 (1 HSPs)
scaffold1979 (350-401)||(989-1040)
[»] scaffold0669 (1 HSPs)
scaffold0669 (366-401)||(1943-1978)
[»] scaffold0188 (2 HSPs)
scaffold0188 (126-216)||(31540-31631)
scaffold0188 (246-288)||(31666-31706)
[»] scaffold0096 (1 HSPs)
scaffold0096 (127-216)||(2989-3080)
[»] scaffold1098 (1 HSPs)
scaffold1098 (350-392)||(1801-1843)
[»] scaffold0486 (1 HSPs)
scaffold0486 (363-401)||(2844-2882)
[»] scaffold0453 (1 HSPs)
scaffold0453 (126-218)||(11452-11546)
[»] scaffold0434 (1 HSPs)
scaffold0434 (341-399)||(1548-1606)
[»] scaffold0304 (1 HSPs)
scaffold0304 (341-399)||(206-264)
[»] scaffold0266 (1 HSPs)
scaffold0266 (350-400)||(22920-22970)
[»] scaffold0309 (1 HSPs)
scaffold0309 (231-268)||(20870-20907)
[»] scaffold0149 (1 HSPs)
scaffold0149 (350-399)||(11818-11867)
[»] scaffold0085 (1 HSPs)
scaffold0085 (126-236)||(4571-4684)
[»] scaffold0343 (1 HSPs)
scaffold0343 (317-369)||(297-349)
[»] scaffold0331 (1 HSPs)
scaffold0331 (127-170)||(18668-18712)
[»] scaffold0244 (2 HSPs)
scaffold0244 (349-401)||(9451-9502)
scaffold0244 (349-401)||(13524-13575)
[»] scaffold0039 (1 HSPs)
scaffold0039 (349-401)||(3957-4009)
[»] scaffold0035 (1 HSPs)
scaffold0035 (127-170)||(10611-10655)
[»] scaffold0031 (1 HSPs)
scaffold0031 (341-397)||(108778-108834)
[»] scaffold0003 (1 HSPs)
scaffold0003 (349-389)||(81437-81477)


Alignment Details
Target: chr2 (Bit Score: 386; Significance: 0; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 2 - 411
Target Start/End: Complemental strand, 23878169 - 23877760
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattttctgatgttggattggttgagatggagtcgtatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23878169 caagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattttccgatgttggattggttgagatggagtcgtatgt 23878070  T
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcct 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23878069 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcct 23877970  T
Q  202 tgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  23877969 tgtagttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaagacttatgtcctgatgataatgctttaaccattcgacagcggtgtgg 23877870  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23877869 gtcacgaccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 23877770  T
Q  402 tcgttatatt 411  Q
    ||||||||||    
T  23877769 tcgttatatt 23877760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 88 - 395
Target Start/End: Original strand, 23102391 - 23102696
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| ||| |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23102391 atggagttgtaagtcatatatacaaatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcctaaaagtgggagagcttcg 23102490  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| |||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23102491 gctctggaactccttgtcgttcaaagcggtggaacactagtttttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccatt 23102590  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||    
T  23102591 cgacagcggtgtgggtcacggccctg-aatatggtaccacatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgt 23102688  T
Q  388 tgttgttg 395  Q
    ||||||||    
T  23102689 tgttgttg 23102696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 100 - 395
Target Start/End: Original strand, 23089975 - 23090268
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23089975 gtcatatatacaaatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctctggaacgc 23090074  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgt 299  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  23090075 cttgtcgttaaaagcggtggaacactagttattcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgt 23090174  T
Q  300 gggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttg 395  Q
    |||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||||||||||    
T  23090175 gggtcacgaccctg-aatatggtaccacatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgttgttgttg 23090268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 9241539 - 9241282
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||| |    
T  9241539 gagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtggaagaacttcggctctggaacgccttgtcgttcaaagcggtggaacatt 9241440  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| | |||||||||    
T  9241439 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacgaccctg-attatggtacc 9241341  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  9241340 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 9241282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 6482531 - 6482257
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6482531 gtggagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaac 6482432  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6482431 actagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggt 6482332  T
Q  323 accacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||||||||||| || | | ||||| |||| ||   ||||| ||| ||||||||||||||||||||||||    
T  6482331 accacatgcatagttgcatttattgaggagtattagggggaatgtcatgtc-ttgcatgagtcgttgttgttggtt 6482257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 119 - 384
Target Start/End: Original strand, 23169262 - 23169525
Alignment:
Q  119 attagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||| |||||||||  || || |||| |||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  23169262 attagtggagttgtatgtggatatacacgggttgggtagttgcataagcatcaaagtgggagagtttcggctctggaacgccttgtcgttcaaagcggtg 23169361  T
Q  219 gaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaata 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||    
T  23169362 gaacactagttgttcaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-atta 23169460  T
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    |||||||||||||||||||||| || ||| ||||||||| ||| | ||||| |||||| |||||||    
T  23169461 tggtaccacatgcatagttgcatttatcgaggagtcttatagg-ggtgtcatgtcatttcatgagt 23169525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 119 - 384
Target Start/End: Original strand, 23580519 - 23580782
Alignment:
Q  119 attagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||| |||||||||  || || |||| |||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  23580519 attagtggagttgtatgtggatatacacgggttgggtagttgcataagcatcaaagtgggagagtttcggctctggaacgccttgtcgttcaaagcggtg 23580618  T
Q  219 gaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaata 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||    
T  23580619 gaacactagttgttcaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-atta 23580717  T
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    |||||||||||||||||||||| || ||| ||||||||| ||| | ||||| |||||| |||||||    
T  23580718 tggtaccacatgcatagttgcatttatcgaggagtcttatagg-ggtgtcatgtcatttcatgagt 23580782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 128 - 411
Target Start/End: Complemental strand, 23264188 - 23263905
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||| ||||| ||  || ||||||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||||||||    
T  23264188 gttgtatgtagatatacaccagtggagtctgttgcataagcataaaagcgggagggcttcggccctggaacgccttgtcgttcaaagcggtggaacacta 23264089  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    |||||||||||||||||| |||||||||||||||||||||||  | |||||||||| ||||||| || || | |||   |||||||| ||||||||||||    
T  23264088 gttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaatcattcgatagtggtgagggctccggccctg-aatatggtacca 23263990  T
Q  327 catgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  23263989 catgcttagttgcaattgtcgaggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaattgctatatt 23263905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 6485998 - 6485724
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6485998 gtggagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaac 6485899  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6485898 actagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggt 6485799  T
Q  323 accacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||||||||||| || | | ||||| |||| ||    |||| ||| ||||||||||||||||||||||||    
T  6485798 accacatgcatagttgcatttattgaggagtattagggggaaggtcatgtc-ttgcatgagtcgttgttgttggtt 6485724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 92 - 411
Target Start/End: Complemental strand, 21907490 - 21907170
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggct 190  Q
    |||||||||||||||| | | ||| ||||| || | ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||     
T  21907490 agtcgtatgtcatatatacatatatgcatt-gtcgggttgtatgtagatatacacaagtggagtcagttgcataagcataaaagtgggagggcttcggcc 21907392  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcg 289  Q
     ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||||||  | |||| ||||||||||||    
T  21907391 ctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgttttgcggtgaggacttatgtcctgaaaagaatgttttaaccattcg 21907292  T
Q  290 a-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgtt 388  Q
    |  ||||| | |||   |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  21907291 attagcggtgagggctccggccctg-aatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcattgcatgagtcgtt 21907193  T
Q  389 gttgttggttgaatcgttatatt 411  Q
    || ||||||||||| | ||||||    
T  21907192 gtagttggttgaattgctatatt 21907170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 127 - 340
Target Start/End: Complemental strand, 26582880 - 26582668
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26582880 agttgtatgtagatatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacacta 26582781  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  26582780 gttgttcaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-gttatggtacca 26582682  T
Q  327 catgcatagttgca 340  Q
    ||||||||||||||    
T  26582681 catgcatagttgca 26582668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 121 - 385
Target Start/End: Complemental strand, 20261034 - 20260773
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  20261034 tagttgagttgtatgtagatatacacaggtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 20260935  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     ||||||||| |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| | | ||    
T  20260934 gcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtgtgggtcacggccctg-attttg 20260837  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||  |||| | |||||||||| || ||||||| ||| |||||||||||    
T  20260836 gtaccacatgcatagttgcttttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 20260773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 200856 - 200634
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  200856 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 200758  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  200757 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 200659  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  200658 ttatggtaccacatgcatatttgca 200634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 27367545 - 27367767
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  27367545 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcata-gcatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 27367643  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  27367644 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 27367742  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  27367743 ttatggtaccacatgcatatttgca 27367767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 22810115 - 22809882
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||    
T  22810115 gtcatatacatatatatgcattggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcaggagagcttcggctctggaacgc 22810016  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||  || |||||||||||||||| | ||||| |    
T  22810015 cttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctatagcggtg 22809916  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     ||| | ||||||||  ||||||||||||||||||    
T  22809915 agggcctcggccctg-gatatggtaccacatgcat 22809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 6744286 - 6744508
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  6744286 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 6744384  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||| |    
T  6744385 tggaacactggttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgttttaaccattcgacagcggtgtgggtcacggccctg-a 6744483  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  6744484 ttatggtaccacatgcatatttgca 6744508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 43693616 - 43693394
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || ||||||||||||||||| |||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  43693616 gcatttgttgagttgtatgtagatatccacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 43693518  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||| |    
T  43693517 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacaacggtgtgggtcacggccctg-a 43693419  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  43693418 ttatggtaccacatgcatatttgca 43693394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 5706980 - 5707198
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||  || || |||| |||||| ||| || ||||||||||||||||| |||||||| | || |||||||||||||||    
T  5706980 tagtagagttgtatgtagatatacactggttgggtagttgcataatcatcaa-gtgggagagcttcggctctggaacgcttcgtcgttcaaagcggtgga 5707078  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  5707079 gcactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattacg 5707178  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  5707179 gtaccacatgcatatttgca 5707198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 128 - 390
Target Start/End: Original strand, 21073951 - 21074214
Alignment:
Q  128 gttgtatgtagatatacacaagtgggtt-agtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||||||||| || | | |||||| |||||||| ||||| ||||||||  ||||||| ||||| ||||||||||||||||||||     
T  21073951 gttgtatgtagatatacacaagtggattcaattgcataaccataaaagcgggagggcttcggccctggaacgtcttgtcgttcaaagcggtggaacactt 21074050  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| ||||||||||||  |||||||||  | ||||||||||||||||||  ||||| | |||   |||||||| |||||||||||    
T  21074051 gttgttcaaagcggtgtttagcggtgaggacccatgtcctgaaaagaatgctttaaccattcgattagcggtgagggctccggccctg-aatatggtacc 21074149  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    ||||||||||||||| |||| | ||||||||||| |||| |||| ||||||||||||||||||||    
T  21074150 acatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgt 21074214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 2105782 - 2105577
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  2105782 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 2105683  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||||| ||||||||||    
T  2105682 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctgaattatggtacca 2105584  T
Q  327 catgcat 333  Q
    |||||||    
T  2105583 catgcat 2105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 19703451 - 19703615
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  19703451 gagttgtatgtagatatacaccagtggagttagttgcataagcataaaagcgggagggcttcggccctggaacgccttgttgttcaaagcggtggaacac 19703550  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||||||||||||||||| | |||||||||||||||||||||  || ||||||||||||||||    
T  19703551 tagttgttcaaagcggtgtttatcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 19703615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 154 - 385
Target Start/End: Original strand, 10685624 - 10685852
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||| || |||||    
T  10685624 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgtt-agtggtga 10685722  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagt 353  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||| |||| | |||||    
T  10685723 ggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-attttggtaccacatgcatagttgcatttgttgaggagt 10685821  T
Q  354 cttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||| || ||||||| ||| |||||||||||    
T  10685822 cttagtggagttgtcatgtc-ttgcatgagtc 10685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 20724267 - 20724077
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||  ||||||| |||||  ||||||||||||||||||||||| ||||| |||||| ||||||||| ||||| ||||| ||||||||  | |||||    
T  20724267 gtcatatgaatacatatgcattgttggagttgtatgtagatatacaccagtggagttagttgcataagcaaaaaagcgggagggcttcggccctagaacg 20724168  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||    
T  20724167 ccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaatgaatgctttaaccattc 20724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 27295980 - 27296181
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||||| |||||||||||||||||| ||||||||   || |||||||| ||||||  |||||||     
T  27295980 gtatgtagatatactcaaggggattagttgcataaacataacagtgggagagcttcggctctggaacgctcggtcgttcaaagtggtggagtactagtta 27296079  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  27296080 ctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 27296178  T
Q  331 cat 333  Q
    |||    
T  27296179 cat 27296181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 23291133 - 23290925
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||| ||||  ||||||||||||| ||||||||||||| |||||     
T  23291133 agttgtatgtagatatacacaagtggagttagttgcataagcacaaaagtgggagggctccggccctggaacgccttgtcgttcaaagcggtgaaacact 23291034  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | |||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||||||  ||||| | |||   |||||||| |||||||||    
T  23291033 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaacgaatgctttaaccattcgattagcggtgagggctccggccctg-aatatggta 23290935  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  23290934 ccacatgcat 23290925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 12572512 - 12572311
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  12572512 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 12572413  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  12572412 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 12572315  T
Q  330 gcat 333  Q
    ||||    
T  12572314 gcat 12572311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 12578994 - 12578793
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  12578994 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 12578895  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  12578894 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 12578797  T
Q  330 gcat 333  Q
    ||||    
T  12578796 gcat 12578793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 126 - 355
Target Start/End: Original strand, 19649512 - 19649743
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||| ||||||| ||||| |||| |||  ||||||||||||| |||||||||||||||||||     
T  19649512 gagttgtatgtagatatacacaagtgagtcagttgcataagtataaaagcgggagggctttggccctggaacgccttgtcgttcaaagcggtggaacact 19649611  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||||| ||||||||||||| |||||||| |  | |||||||||||||||| |  ||||| | |||   |||||||| ||||||||    
T  19649612 ttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcaattagcggtgagggcttcggccctg-aatatggt 19649710  T
Q  323 accacatgcatagttgcaattgtcggggagtct 355  Q
    ||||||||||||  |||| |||| | |||||||    
T  19649711 accacatgcatatctgcatttgttgaggagtct 19649743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 255 - 411
Target Start/End: Complemental strand, 23269276 - 23269121
Alignment:
Q  255 gacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtc 354  Q
    ||||||||||||||  | |||||||||||||||||| ||||| | |||   |||||||||| ||||||||||||||| |||||||||||||||  |||||    
T  23269276 gacttatgtcctgaaaagaatgctttaaccattcgatagcggtgagggctccggccctgaa-tatggtaccacatgcttagttgcaattgtcgaagagtc 23269178  T
Q  355 ttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  23269177 ttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaattgctatatt 23269121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 255 - 411
Target Start/End: Complemental strand, 23276145 - 23275990
Alignment:
Q  255 gacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtc 354  Q
    ||||||||||||||  | |||||||||||||||||| ||||| | |||   |||||||||| ||||||||||||||| |||||||||||||||  |||||    
T  23276145 gacttatgtcctgaaaagaatgctttaaccattcgatagcggtgagggctccggccctgaa-tatggtaccacatgcttagttgcaattgtcgaagagtc 23276047  T
Q  355 ttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  23276046 ttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaattgctatatt 23275990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 24943612 - 24943376
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| |||||  | |||||||||||||||||||||||||||| || ||| ||||| ||| ||||||||||| |||  |||  | ||||    
T  24943612 gtcatataaatacatatgcattttttggagttgtatgtagatatacacaagtggagtcagttgcatacgcacaaaagtgggagggctctggccctagaac 24943513  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcg 295  Q
     |||||| ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||  | ||||||||||||||||||  ||||    
T  24943512 accttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttcgcggtgaggacttatgtcctgaaaagaatgctttaaccattcgattagcg 24943413  T
Q  296 gcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    | | |||   |||||||| |||||||||||||||||||    
T  24943412 gtgagggctgcggccctg-aatatggtaccacatgcat 24943376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 23752998 - 23752836
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||  |||  |||||||||| || |||||||||||||||||||     
T  23752998 agttgtatgtagatatacacaagtggagttagttgcataagcacaaaagtgggagggctctggccctggaacgcctcgtcgttcaaagcggtggaacact 23752899  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    | |||||||||||||||| | |||||||||||||||||||||| |||  ||||||||||||||||    
T  23752898 ttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaatg--aatgctttaaccattc 23752836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 27785872 - 27785695
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  27785872 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 27785775  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  27785774 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 27785695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 27791093 - 27790916
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  27791093 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 27790996  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  27790995 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 27790916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 24658981 - 24658773
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| | ||||| ||||||| ||||| |||| |||  ||||||||||||| |||||||||||||||||||     
T  24658981 agttgtatgtagatatacacaagtggagtaagttgtataagtataaaagcgggagggctttggccctggaacgccttgtcgttcaaagcggtggaacact 24658882  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | ||||||||||| |||||| ||| ||||| |||||||||||||    |||||||||||||||| |  ||||| | |||   |||||||| |||||||||    
T  24658881 ttgttgttcaaagtggtgtttagcagtgagaacttatgtcctgaaatgaatgctttaaccattcaattagcggtgagggctccggccctg-aatatggta 24658783  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  24658782 ccacatgcat 24658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 26884361 - 26884117
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||||| ||| |||  | ||||   ||||||||||||| ||||||||||||||||||    
T  26884361 gagttgtatgtagatatacacaagtggagtcagt-gcataagcataaaaatggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaaca 26884263  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    ||| |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | | ||| | ||| | ||||||||  ||||    
T  26884262 ctatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggccccggccctg--atat 26884167  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||||||||||| |||| | |||||||||| || |||||||    
T  26884166 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 26884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 27210947 - 27211192
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  || |||  | ||||   | ||||||||||| ||||||||||||||||||    
T  27210947 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacggtgaggacctcggtcctagaacgccttgtcgttcaaagcggtggaaca 27211046  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatg---ataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    ||| |||||||||||||||||| |   | ||||||| |||||||||||   | |||| ||||||||||| | | ||| | |||   ||||||||  ||||    
T  27211047 ctatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgatgaaaagaatgttttaaccattctataacggtgagggctccggccctg--atat 27211142  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||||||||||| |||| | |||||||||| || |||||||    
T  27211143 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 27211192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 126 - 358
Target Start/End: Original strand, 6261516 - 6261748
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||  | |  ||||||||||||||  | |||  | ||||   ||||||||||||| ||||||||||||||||||||    
T  6261516 gagttgtatgtagatatacacaagtggagtcggtgcataagcataaaatggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacact 6261615  T
Q  226 -agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatg---ataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
     ||||||||||||||||||| |   | ||||||| |||||||||||   | |||||||||||||||| | | ||| | ||||  |||| |||  ||||||    
T  6261616 aagttgttcaaagcggtgttaa--tgggaggactcatgtcctgatgaaaagaatgctttaaccattctataacggtgagggtttcggctctg--atatgg 6261711  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||| |||| | ||||| ||||    
T  6261712 taccacatgcatagttgcatttgttgaggagttttag 6261748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 24652537 - 24652374
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| ||  || | ||||| ||||||| ||||| |||  |||  ||||||| ||||| ||||||||||||||||||||    
T  24652537 agttgtatgtagatatacacaagtggagtctgttgtataagtataaaagcgggagggctctggccctggaacgtcttgtcgttcaaagcggtggaacact 24652438  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
      |||||||||||| ||||| ||||||||||||||||||| |||    ||||||||||||||||    
T  24652437 ttgttgttcaaagcagtgtttagcggtgaggacttatgtcttgaaatgaatgctttaaccattc 24652374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 248 - 398
Target Start/End: Complemental strand, 23062585 - 23062436
Alignment:
Q  248 cggtgaggacttatgtcctgatgat-aatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    |||||||||||||||||||||  || |||||||||||||||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| ||||    
T  23062585 cggtgaggacttatgtcctga--atgaatgctttaaccattcaattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcacttgt 23062489  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
     | ||||||||||| ||||||||| || |||||||| |||||||| |||||||    
T  23062488 tgaggagtcttagaagtgttgtcatgttattgcatgtgtcgttgtcgttggtt 23062436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 19662792 - 19663052
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  19662792 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 19662891  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  19662892 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 19662988  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  19662989 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 19663052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 28971246 - 28971336
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  ||||||||||||| |||||||||||    
T  28971246 gagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctggaacgccttgtcgttcaaagcgg 28971336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 21133193 - 21133310
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  | |||||    
T  21133193 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctagaacg 21133292  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  21133293 ccttgtcgttcaaagcgg 21133310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 27208612 - 27208733
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  || |||  | ||||   | ||||||||||| ||||||||||||||||||    
T  27208612 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacggtgaggacctcggtcctagaacgccttgtcgttcaaagcggtggaaca 27208711  T
Q  224 cta-gttgttcaaagcggtgtt 244  Q
    ||| ||||||||||||||||||    
T  27208712 ctatgttgttcaaagcggtgtt 27208733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 22796556 - 22796688
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggag-ttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagctt 185  Q
    ||||||| ||| |||||||| | | ||| ||||| || ||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||     
T  22796556 atggagttgtaagtcatatatacatatatgcatttgttgaggttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctc 22796655  T
Q  186 cggctttggaacgccttgttgttcaaagcggtg 218  Q
     |||  ||||||||||||| |||||||||||||    
T  22796656 tggccctggaacgccttgtcgttcaaagcggtg 22796688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 21124038 - 21124112
Alignment:
Q  318 atggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||||||||||||| | | |||| | |||||||||| |||||||||| ||||||||||||||||||||||    
T  21124038 atggtaccacatgcatagtcgaatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 21124112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 29281150 - 29280890
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  29281150 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 29281051  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | |  |  | |||   |||| ||||  ||||    
T  29281050 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctga--tatg 29280954  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  29280953 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 29280890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 23062796 - 23062668
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| || |||||||||| |||||||||||||||| || ||| ||||||||||||||| ||||| |||      
T  23062796 atggagtcgtaagtcatatatacatatatgcatt-gtcgagttgtatgcagatatacacaagtggagtcagttgcataagcataaaagcgggagggctct 23062698  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
    |||  |||||||||| || |||||||||||    
T  23062697 ggccctggaacgcctcgtcgttcaaagcgg 23062668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 24660470 - 24660403
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||||||||||||    
T  24660470 tggtaccacatgcatagtcgca-ttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgt 24660403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 21907581 - 21907516
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggt 83  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  21907581 gttgaatgaacttgatgtattagtatgattgttattaattatacatttttctgatgttggattggt 21907516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 21133345 - 21133453
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga--cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaatt 343  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |  |||||| | |||   |||||||||| |||||||| ||||||||| ||||| ||    
T  21133345 agcggtgaggacttatgtcctgatga--atgctttaaccattcaaaacagcggtgagggcttcggccctgaa-tatggtactacatgcatatttgcattt 21133441  T
Q  344 gtcggggagtct 355  Q
    || | |||||||    
T  21133442 gttgaggagtct 21133453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 15643412 - 15643491
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | |||||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  15643412 tggtaccacatgcataattgcatttattgaggagtcttagtggtgtcgtcatgtca-tgcatgagtccttgttgttggttg 15643491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 25181800 - 25181966
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  25181800 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 25181899  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    ||| |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  25181900 ctatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 25181966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 20648282 - 20648191
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  20648282 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 20648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 25267412 - 25267321
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  25267412 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 25267321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 9731 - 9486
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  9731 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 9632  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| ||||||||||  | |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  9631 ctatgttgttcaaaatgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 9535  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| || | | |||||||||| || |||||||    
T  9534 gtaccacatgcatagttgcattttttgaggagtcttagtggagttgtca 9486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 22860550 - 22860421
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||| |||||||||||||| || ||| ||||||||||| |||| ||||| |||     
T  22860550 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtaaatatacacaagtggagtcagttgcataagcatataaagcgggagggctc 22860452  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      ||  ||||||||||||| |||||||||||    
T  22860451 ttgccctggaacgccttgtcgttcaaagcgg 22860421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 17633823 - 17633763
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||| | |||||||||| ||||| |||| |||| |||||||||||||||||    
T  17633823 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtcagtgcatgagtcgttgttg 17633763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 28971371 - 28971463
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    ||| |||||||||||||||||||||  ||||||||||||||||  ||||||| | |||   ||| |||| |||||||||||||||||||| |||||    
T  28971371 agcagtgaggacttatgtcctgatg--aatgctttaaccattcaaacagcggtgagggcttcggtcctg-aatatggtaccacatgcatatttgca 28971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 32911606 - 32911685
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  32911606 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 32911685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 38931724 - 38931803
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||| || ||| |||| | |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  38931724 tggtaccacatgcattgtcgca-ttgttgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 38931803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 8889935 - 8890026
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  || |||||||||| |||||||||||    
T  8889935 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctgcaacgccttgtcgttcaaagcgg 8890026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 8890163 - 8890221
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| ||||||||||  |  ||||||||||| |||||||||||||    
T  8890163 attgtcgaggagtcttagcggtgttgtcaaatagttgcatgagtcattgttgttggttg 8890221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 23672360 - 23672418
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  || ||||||||||| |||||| |||||||    
T  23672360 attgtcgaggagtcttagcggtgttgtcgagtaattgcatgagttgttgttattggttg 23672418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 25267184 - 25267126
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  25267184 attgtcgaggagtcttagtggtgttgtcgagtagttgcatgagtcattgttgttggttg 25267126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 24660674 - 24660629
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||    
T  24660674 gagttgtatgtagatatacacaagtggagtcagttgcataagcata 24660629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 6744532 - 6744580
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  6744532 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 6744580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 20914534 - 20914585
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| ||| |||||| ||  |||||||||||||||||||||||||||    
T  20914534 ggagtcttagcggt-ttgtcaagtagttgcatgagtcgttgttgttggttgaa 20914585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 22840844 - 22840804
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| | |||||||||| ||||||||||||||||||||    
T  22840844 gtgttgttatgtcattgcataagtcgttgttgttggttgaa 22840804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 25107437 - 25107481
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  25107437 agttgtatgtagatatacacaagtggagtcagttgcataagcata 25107481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 2 - 410
Target Start/End: Original strand, 14057453 - 14057860
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacatttt-ctgatgttggattggttgagatggagtcgtatg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||| |||||    
T  14057453 caagtgaaaagatgttacgttgaatgacttgatgtattagtatgattgacaataattatacatttttctgatgttggattggttgtgatgaagttgtatg 14057552  T
Q  101 tcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcc 200  Q
    ||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14057553 tcatatatatacatatgcattagttgagttgtatgtaaatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctctggaacgcc 14057652  T
Q  201 ttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtg 300  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||| | |    
T  14057653 ttgtcgttcaaagcagtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgataagaatgctttaaccattcgatagcggtgag 14057752  T
Q  301 ggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||   |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| |||||| ||||||| |||||||||||||||    
T  14057753 ggctccggccctg-aatatggtaccacatgcatagttgcatttgtcgaggagtcttagagg-gttgtcatgtcattacatgagttgttgttgttggttga 14057850  T
Q  401 atcgttatat 410  Q
    || |||||||    
T  14057851 attgttatat 14057860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 44476446 - 44476172
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  44476446 gtggagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaac 44476347  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  44476346 actagttgttcaaaacggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggt 44476247  T
Q  323 accacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||||||||||| || | | ||||| |||| ||    |||| ||| ||||||||||||||||||||||||    
T  44476246 accacatgcatagttgcatttattgaggagtattagggggaaggtcatgtc-ttgcatgagtcgttgttgttggtt 44476172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 44479708 - 44479434
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  44479708 gtggagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaac 44479609  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  44479608 actagttgttcaaaacggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggt 44479509  T
Q  323 accacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||||||||||| || | | ||||| |||| ||    |||| ||| ||||||||||||||||||||||||    
T  44479508 accacatgcatagttgcatttattgaggagtattagggggaaggtcatgtc-ttgcatgagtcgttgttgttggtt 44479434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 139 - 411
Target Start/End: Complemental strand, 18609987 - 18609715
Alignment:
Q  139 atatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaag 237  Q
    |||||||| ||||| || ||| ||||||||||||||| ||||| ||||||||  ||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  18609987 atatacaccagtggagtcagttgcataagcataaaagcgggagggcttcggccctggaatgccttgtcgttgaaagcggtggaacactagttgttcaaag 18609888  T
Q  238 cggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagtt 337  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||||| ||| | | |||   |||||||| |||||||||||||||||||||||    
T  18609887 cggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgatagcagtgagggctccggccctg-aatatggtaccacatgcatagtt 18609789  T
Q  338 gcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  18609788 gcaattatcgaggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttgttggatgaattgctatatt 18609715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 103 - 355
Target Start/End: Complemental strand, 23825353 - 23825102
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| |||||||||||    
T  23825353 atatatatatatatgcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgcctt 23825255  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  23825254 gtcgttcaaagtggtggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgg 23825155  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtct 355  Q
    |||||||||||| | |||||||||||||||||| ||||| |||| | |||||||    
T  23825154 gtcacggccctg-attatggtaccacatgcatatttgcatttgttgaggagtct 23825102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 89 - 340
Target Start/End: Complemental strand, 17053840 - 17053590
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcgg 188  Q
    |||||| |||||||||||  ||||||| | | | || |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||| |    
T  17053840 tggagtagtatgtcatatg-atacatatgtagtggtcgagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcag 17053742  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    || ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  17053741 ctctggaacgccttgtcgttcaaagcggtggaaaactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattc 17053642  T
Q  289 gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    | ||| || |||||||| ||||||||| ||||||||||||||||||||||||    
T  17053641 ggcagtggtgtgggtcatggccctgaattatggtaccacatgcatagttgca 17053590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 23865649 - 23865427
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||| |||||||||||||||||||||| || || |||| |||||| ||| || ||||||||||||||||| ||||||||||||| |||||||||||    
T  23865649 gcattagttgagttgtatgtagatatacacaggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgccttgtcgttcaaagcgg 23865551  T
Q  217 tggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaa 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||| ||||||| |     
T  23865550 tggaacactagttgttcaaagcggtgtggagcggtgaggacttatgtcctgttgagaatgctttaaccatttgacagcggtgtgggtcatggccctggat 23865451  T
Q  317 tatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||| |||||    
T  23865450 tatggtaccacatgcatacttgca 23865427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 19902894 - 19903112
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| ||||||  || || ||||||||||||||||| | ||||||||||| |||||||||||||||    
T  19902894 tagttgagttgtatgtagatatacacaggttgggtagttgcataaatatcaa-gtgggagagcttcggctctagaacgccttgtcgttcaaagcggtgga 19902992  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19902993 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatg 19903092  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  19903093 gtaccacatgcataattgca 19903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 103 - 340
Target Start/End: Original strand, 30766897 - 30767133
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| ||||| || |||||||||||||||||||||| || |  |||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  30766897 atatatatatatatgcatttgttgagttgtatgtagatatacacaggttgagtagttgcata-gcatcaaagtgggagagcttcggctctggaacgcctt 30766995  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||    
T  30766996 gtcgttcaaagtggtggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtccttatgagaatgctttaaccattcgacagcggtgtgg 30767095  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||| | |||||||||||||||||| |||||    
T  30767096 gtcacggccctg-attatggtaccacatgcatatttgca 30767133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 22025528 - 22025762
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  22025528 gtcatatacatatatatgcataggttgagttgtatgtagatatagacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgc 22025627  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga--taatgctttaaccattcgacagcggc 297  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |   |||||||||||||||| |||||||     
T  22025628 cttgtcgttcaaagcggtggaacactagttgctcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaatgctttaaccattctacagcggt 22025727  T
Q  298 gtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    | |||   |||||||| | |||||||||||||||||    
T  22025728 gagggcttcggccctg-attatggtaccacatgcat 22025762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 25409731 - 25409547
Alignment:
Q  155 tagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgag 254  Q
    |||| |||||| ||| |||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||     
T  25409731 tagttgcataaacatcaaagtgggagagcttcggctctggatcgcctcgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgat 25409632  T
Q  255 gacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  25409631 gacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-gttatggtaccacatgcatagttgca 25409547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 103 - 263
Target Start/End: Complemental strand, 25111071 - 25110911
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||    
T  25111071 atatatatatatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctctggaatgtctt 25110972  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgt 263  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25110971 gtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgt 25110911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 100 - 296
Target Start/End: Original strand, 22063531 - 22063729
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||    
T  22063531 gtcatatacatatatatgcataggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctccggaacgc 22063630  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga--taatgctttaaccattcgacagcgg 296  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||  |   |||||||||||||||| |||||||    
T  22063631 cttgtcgttcaaagcggtggagcactagttgctcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaatgctttaaccattctacagcgg 22063729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 124 - 333
Target Start/End: Original strand, 41009426 - 41009637
Alignment:
Q  124 tggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  41009426 tggagttgtatgtagatatacaccagtggagttagttgcataagcataaaagcgggagggcttcggccctggaacgccttgtcgttcaaagcggtggaac 41009525  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatg 320  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||| |  ||||| | ||||  |||||||| | ||||    
T  41009526 actagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattcaattagcggtgagggtttcggccctg-attatg 41009624  T
Q  321 gtaccacatgcat 333  Q
    |||||||||||||    
T  41009625 gtaccacatgcat 41009637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 21669064 - 21668901
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||| ||||||||||||| || |||  |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  21669064 gagttgtatgtatatatacacaagtgagtcagttacataagcataaaagcgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 21668965  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  21668964 agttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 21668901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 21282266 - 21282051
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  21282266 gagttgtatgtagatatacacaagtgggttagttgcataagcataaaagcgggagagcttcggctctggaacaccttgtcgttcaaaacggtggaacact 21282167  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
     |||||||||||||||||  |||||||| |||| |||||||| |  | ||||||||||||||||||  ||||| | |||   |||||||| |||||||||    
T  21282166 tgttgttcaaagcggtgtatagcggtgacgactcatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aatatggta 21282068  T
Q  324 ccacatgcatagttgca 340  Q
    ||||||||||| |||||    
T  21282067 ccacatgcatatttgca 21282051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 9273159 - 9273360
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||||| |||||||||||||||||| |||||||| | || |||||||| ||||||  |||||||     
T  9273159 gtatgtagatatactcaaggggattagttgcataaacataacagtgggagagcttcggctctggaacgcttggtcgttcaaagtggtggagtactagtta 9273258  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  9273259 ctcaaagtggtgtt-agtggtgaggacttatgttctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 9273357  T
Q  331 cat 333  Q
    |||    
T  9273358 cat 9273360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 22177790 - 22177586
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||| ||    
T  22177790 gttgtatgtagatatacacaagtgggtcagttgcataagcaaaaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcacaag 22177691  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||| ||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  22177690 ttgctcaaagtggtgtt-agtggtgaagacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 22177593  T
Q  327 catgcat 333  Q
    |||||||    
T  22177592 catgcat 22177586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 22050405 - 22050201
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||| ||||||||| | | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  22050405 gttgtatgtagatatactcaagtgggtcatttgcataagcataacagtgggagagcttcggctttggaacgccttgtcgttcaaagtggtggagcactag 22050306  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| | |||| |||||| || |||||||||||| |||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  22050305 ttgcttaaagtggtgtt-agtggtgaggacttaggtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 22050208  T
Q  327 catgcat 333  Q
    |||||||    
T  22050207 catgcat 22050201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 21326818 - 21326984
Alignment:
Q  127 agttgtatgtagatatacacaagtgggtt-agtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| || ||| |||||| ||| |||| ||||| || |||||  ||||||||||||| ||||||||||||||||||||    
T  21326818 agttgtatgtagatatacacaagtggatttagttgcataaacatgaaagcgggagggcctcggccctggaacgccttgtcgttcaaagcggtggaacact 21326917  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg--atgataatgctttaaccattcga 290  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |  | ||||||||||||||||||    
T  21326918 agttgttcaaagcggtgtttagcggtgaggacttatgtcctggaaaaagaatgctttaaccattcga 21326984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 1804467 - 1804668
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  1804467 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 1804566  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  1804567 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 1804664  T
Q  330 gcat 333  Q
    ||||    
T  1804665 gcat 1804668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 10607168 - 10606976
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||    
T  10607168 gtcatataaatacatatgcatttgtcggagttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaac 10607069  T
Q  198 gccttgttgttcaaagcggtggaaca-ctagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    ||||||| |||||||||||||||||| || ||||||||| |||||||| |||||||||||||||||||||| |  | ||||||||||||||||    
T  10607068 gccttgtcgttcaaagcggtggaacaccttgttgttcaacgcggtgtttagcggtgaggacttatgtcctgaaaaagaatgctttaaccattc 10606976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 36799577 - 36799376
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  36799577 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 36799478  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  36799477 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 36799380  T
Q  330 gcat 333  Q
    ||||    
T  36799379 gcat 36799376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 21322230 - 21322396
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| |||||| |||||| ||| |||| ||||| |  |||||  | ||||||||||| ||||||||||||||||||||    
T  21322230 agttgtatgtagatatacacaagtggagttagttgcataaacatgaaagcgggagggtctcggccctagaacgccttgtcgttcaaagcggtggaacact 21322329  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg--atgataatgctttaaccattcga 290  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |  | ||||||||||||||||||    
T  21322330 agttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaaagaatgctttaaccattcga 21322396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 22055923 - 22055719
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||| ||||||||| | | |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  22055923 gttgtatgtagatatactcaagtgggtcatttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 22055824  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| | |||| |||||| || |||||||| ||| |||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  22055823 ttgcttaaagtggtgtt-agtggtgaggatttaggtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 22055726  T
Q  327 catgcat 333  Q
    |||||||    
T  22055725 catgcat 22055719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 18681526 - 18681703
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  18681526 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 18681623  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  18681624 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 18681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 31567835 - 31568012
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  31567835 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 31567932  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  31567933 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 31568012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 31573056 - 31573233
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  31573056 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 31573153  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  31573154 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 31573233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25111207 - 25111101
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatggagtcgtatg 100  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||    
T  25111207 caagtgaaaatatgttacgttgaatgacttgatgtattagtatgattgacattaattatacatttttctgatgttggattggttgtgatgaagttgtatg 25111108  T
Q  101 tcatata 107  Q
    |||||||    
T  25111107 tcatata 25111101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 23653079 - 23653230
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||||||| |  ||||||||||||||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| |||    
T  23653079 agcggtgaggacttatgtcctgataa--atgctttaaccattcaattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcatttg 23653175  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    | | |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23653176 ttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttg 23653230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 20973966 - 20974156
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacg 198  Q
    |||||||| ||||||| |||||  |||||||||||||||||||| ||||| |||| ||| ||||||||||| |||| ||||| |||   ||  | ||| |    
T  20973966 gtcatataaatacatatgcattgttggagttgtatgtagatataaacaagcgggtcagttgcataagcatataaagcgggagggctcttgccctagaaag 20974065  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    |||| | ||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |  | ||||||||||||||||    
T  20974066 ccttatagttcaaagcggtggaacacaagttgttcaaagcggtgtttagcgatgaggacttatgtcctgaaaaagaatgctttaaccattc 20974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 128 - 242
Target Start/End: Original strand, 21300114 - 21300229
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  ||| ||||||||||| || ||||||||||||||||||||     
T  21300114 gttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccttggaacgcctcgtcgttcaaagcggtggaacactt 21300213  T
Q  227 gttgttcaaagcggtg 242  Q
    ||||||||||||||||    
T  21300214 gttgttcaaagcggtg 21300229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 19988159 - 19988367
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcataa-aagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||  ||| ||||| |||    |  ||||||||||||| |||||||||||||||||| |    
T  19988159 agttgtatgtagatatacactagtgggtcagttgcaaaagcatatgaagcgggagggctctttccctggaacgccttgtcgttcaaagcggtggaacatt 19988258  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
      |||||| ||||||||||| |||||||||||||||||||||||    |||||||||||||||| |  ||||| | |||   ||||||| ||||||||||    
T  19988259 ttgttgttgaaagcggtgtttagcggtgaggacttatgtcctgaaatgaatgctttaaccattcaattagcggtgagggctccggccct-aaatatggta 19988357  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  19988358 ccacatgcat 19988367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 22176003 - 22176105
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||| ||||||||    
T  22176003 gtcatatacatatatatgcattggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaa--gggagagattcggctctggaacgc 22176100  T
Q  200 cttgt 204  Q
    |||||    
T  22176101 cttgt 22176105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 89 - 385
Target Start/End: Original strand, 8728943 - 8729240
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagag--ctt 185  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||||   |  |||  |||    
T  8728943 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaaacgatgaggactt 8729041  T
Q  186 cggctttggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaa 282  Q
    |||   |||||||| |||| ||||||| || |||||||||| |||||||||| || |||| | || |||||||| |||||||||| | |  |||||||||    
T  8729042 cggtcctggaacgctttgtcgttcaaaacgatggaacactatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaa 8729140  T
Q  283 ccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatga 382  Q
    |||||| | | ||  | |||   |||| ||||  |||||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| ||||||||    
T  8729141 ccattctataacgatgagggcttcggctctga--tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatga 8729237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 23653924 - 23653773
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| ||     
T  23653924 agcggtgaggacttatgtcctaatga--atgctttaaccattctattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcatttc 23653828  T
Q  345 tcggggagtcttagaggtgttgtcacgtca-ttgcatgagtcgttgttgttggttg 399  Q
    | | |||||| ||| |||||||||| |||| |||||||||||| ||||||||||||    
T  23653827 ttgaggagtc-taggggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 23653773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 21930618 - 21930546
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  21930618 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 21930546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 21683620 - 21683749
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| || || |||     
T  21683620 atggagttgtaagtcatatacatatatatgcatt-gttgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcggcagggctc 21683718  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      || |||||||||||||| |||||||||||    
T  21683719 ttgccttggaacgccttgtcgttcaaagcgg 21683749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 21687969 - 21688098
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| || || |||     
T  21687969 atggagttgtaagtcatatacatatatatgcatt-gttgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcggcagggctc 21688067  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      || |||||||||||||| |||||||||||    
T  21688068 ttgccttggaacgccttgtcgttcaaagcgg 21688098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 24321570 - 24321815
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  24321570 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 24321669  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  24321670 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 24321766  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  24321767 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 24321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 385
Target Start/End: Original strand, 27942223 - 27942401
Alignment:
Q  206 gttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataa---tgctttaaccattcgacagcggcgtgg 301  Q
    ||||||||||||||||||||| |||||||||||||||||| |  ||  |||||| |||||||||||| ||   || ||||||||||| | | ||| | ||    
T  27942223 gttcaaagcggtggaacactatgttgttcaaagcggtgttaatggg--aggactcatgtcctgatgaaaagaatgttttaaccattctataacggtgagg 27942320  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |   |||| ||||  |||||||||||||||||||||||| |||| | ||||||||||  | ||||||| ||| |||||||||||    
T  27942321 gcttcggctctga--tatggtaccacatgcatagttgcatttgttgaggagtcttagttgagttgtcatgtc-ttgcatgagtc 27942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 31412477 - 31412563
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaa 212  Q
    ||||||||||| |||||||||||||| || ||||||||| ||||||||| | ||| ||||| ||  ||||||||||||| |||||||    
T  31412477 gagttgtatgtggatatacacaagtgagtcagtcgcatatgcataaaagcgagagggcttctgccctggaacgccttgtcgttcaaa 31412563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 31418659 - 31418745
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaa 212  Q
    ||||||||||| |||||||||||||| || ||||||||| ||||||||| | ||| ||||| ||  ||||||||||||| |||||||    
T  31418659 gagttgtatgtggatatacacaagtgagtcagtcgcatatgcataaaagcgagagggcttctgccctggaacgccttgtcgttcaaa 31418745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 385
Target Start/End: Original strand, 8596070 - 8596318
Alignment:
Q  137 agatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta-gttgttc 233  Q
    |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||| | |||||||    
T  8596070 agatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatgttgttc 8596169  T
Q  234 aaagcggtgttgagcggtgaggacttatgtcctgat-gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgca 332  Q
    ||| || |||| | || |||||||| ||||||||||  | |||||||||||||||| | | ||  | | |   |||| |||  |||||||||||||||||    
T  8596170 aaaacgatgtt-aacgatgaggactcatgtcctgataaagaatgctttaaccattctataacgatgagagcttcggctctg--atatggtaccacatgca 8596266  T
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    || ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  8596267 taattgcatttgttgaggagtcttagaagagttgtcatgtc-ttgcatgagtc 8596318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 390
Target Start/End: Complemental strand, 39363565 - 39363417
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcat------agttg 338  Q
    |||||||||||| |  ||||||||||  ||| ||||||||||| | |||||| | |||   |||||||||| |||||||||||||||||      |||||    
T  39363565 agcggtgaggacctgggtcctgatga--atgttttaaccattcaaacagcggtgagggcttcggccctgaa-tatggtaccacatgcatgtgtccagttg 39363469  T
Q  339 caattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    || |||||| |||||||||| |||||||||| ||||||||||||||| ||||    
T  39363468 catttgtcgaggagtcttagtggtgttgtcatgtcattgcatgagtcattgt 39363417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 21839463 - 21839411
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  21839463 ggagtcttagtggtgttgtcatgtcattgcatgagtcgttggtgttggttgaa 21839411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 25110896 - 25110821
Alignment:
Q  306 cggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatga 382  Q
    |||||||||| ||||||||||||||||| | |||| |||||| |||||||||| |||||||||| |||||| |||||    
T  25110896 cggccctgaa-tatggtaccacatgcatggctgcatttgtcgaggagtcttaggggtgttgtcatgtcattacatga 25110821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 264
Target Start/End: Original strand, 20839893 - 20840032
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| | ||||| ||||||| ||||| ||   | |  ||||||||||||| ||||||||  |||||||||     
T  20839893 agttgtatgtagatatacacaagtggagtcagttgtataagtataaaagcgggagggccctgaccatggaacgccttgtcgttcaaagaagtggaacact 20839992  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtc 264  Q
    | ||||||||||| |||||| |||  ||| ||||||||||    
T  20839993 ttgttgttcaaagaggtgtttagcaatgaagacttatgtc 20840032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 20012406 - 20012456
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||||| |||||||    
T  20012406 gagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgatggttga 20012456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 19859719 - 19859627
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  19859719 gagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 19859627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 22743681 - 22743629
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  22743681 ggagtcttagcggtgttgtcaagtagttgcatgagtcgttgttgttggttgaa 22743629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 21690400 - 21690491
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  21690400 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 21690491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 36445719 - 36445810
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  36445719 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 36445810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 21686300 - 21686358
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  21686300 attgtcggggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 21686358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 20783840 - 20783931
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||| || || ||| ||||||||||| |||| |||||||||   ||  |||||||| |||| |||||||||||    
T  20783840 agttgtatgtagatatacacaaggggagtcagttgcataagcatataaagcgggagagctcttgccctggaacgcgttgtcgttcaaagcgg 20783931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 16259726 - 16259633
Alignment:
Q  126 gagttgtatgtagatatacacaagt-gggttagtcgcataagcat--aaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||  ||||| ||||| |||  |||  ||||||||||||| |||| ||||||    
T  16259726 gagttgtatgtagatatacacaagtagagttagttacataagcataaaaaagcgggagggctctggccctggaacgccttgtcgttctaagcgg 16259633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 21683875 - 21683933
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||||||||| |||||||    
T  21683875 attgtcgaggagtcttagtggtgttgtcgagtagttgcatgagtcgttgttattggttg 21683933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 21688224 - 21688282
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||||||||| |||||||    
T  21688224 attgtcgaggagtcttagtggtgttgtcgagtagttgcatgagtcgttgttattggttg 21688282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 21690624 - 21690682
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  21690624 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 21690682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 2 - 402
Target Start/End: Original strand, 19663975 - 19664375
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacatttt-ctgatgttggattggttgagatggagtcgtatg 100  Q
    |||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||| |||||    
T  19663975 caagtgaaaatatgttacattgaatgacttgatgttttagtatgattaacattaattatacatttttctgatgttggattggttgtgatgaagttgtatg 19664074  T
Q  101 tcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcc 200  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  19664075 tcatatatatacatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcattaaagtgggagagcttcggctctggaacgcc 19664174  T
Q  201 ttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtg 300  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||| | | |    
T  19664175 ttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgataagaatgctttaaccattcgatagcagtgag 19664274  T
Q  301 ggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||   |||||||| ||||||||||||||||||||| |||| |||| | ||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  19664275 ggctccggccctg-aatatggtaccacatgcatagctgcatttgttgaggagtcttagaggtgttgtcatgtcattacatgagttgttgttgttggttga 19664373  T
Q  401 at 402  Q
    ||    
T  19664374 at 19664375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 126 - 340
Target Start/End: Original strand, 20438502 - 20438716
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20438502 gagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 20438601  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20438602 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggtacc 20438701  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  20438702 acatgcatagttgca 20438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 103 - 340
Target Start/End: Original strand, 42095851 - 42096087
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| |||||||||||    
T  42095851 atatatatatatatgcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgcctt 42095949  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    || |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  42095950 gtcgttcaaagtggtggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgg 42096049  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||| | |||||||||||||||||| |||||    
T  42096050 gtcacggccctg-attatggtaccacatgcatatttgca 42096087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 21542271 - 21542049
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  21542271 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 21542173  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  21542172 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 21542074  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  21542073 ttatggtaccacatgcatatttgca 21542049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 100 - 334
Target Start/End: Original strand, 20045824 - 20046057
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| ||||||||| | ||||  ||||||||||||||||||||| || || ||||  ||||| ||| || | ||||||||||||||| ||||||||    
T  20045824 gtcatataaatacatacgtaatagtatagttgtatgtagatatacacaggttgggtagtttcataaacatcaa-gcgggagagcttcggctctggaacgc 20045922  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgt 299  Q
    || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||| ||||||| ||    
T  20045923 ctcgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattctacagcggtgt 20046022  T
Q  300 gggtcacggccctgaaatatggtaccacatgcata 334  Q
    |||||||||||||||| ||||||||||||||||||    
T  20046023 gggtcacggccctgaattatggtaccacatgcata 20046057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 41111021 - 41110807
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  41111021 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 41110922  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    ||| |||||||||||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||  || |||||||| | ||||||| ||||||| |    
T  41110921 agtcgttcaaagcggtgtggagcggtgaggacttaggtcatgctgagaatgctttaaccattcgacaatggtgtgggtcatgaccctgaattatggtatc 41110822  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  41110821 acatgcatagttgca 41110807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 89 - 333
Target Start/End: Complemental strand, 32650345 - 32650102
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||||    
T  32650345 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagtgggagagcttcg 32650247  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||  | |||||||||||||||    
T  32650246 gctctggaacgccttgtcgttcaaagcggtggaacattagttgttcaaagcggtgtttagcggtgatgacttatgtcctgaaaagaatgctttaaccatt 32650147  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    ||||| ||| |||||  |||| |||| |||||||||||||||||||    
T  32650146 cgacaacggtgtgggctacggtcctg-aatatggtaccacatgcat 32650102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 29554387 - 29554578
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| ||| ||||  ||||||    
T  29554387 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctccggccctggaac 29554486  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  29554487 gccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 29554578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 126 - 267
Target Start/End: Complemental strand, 20242740 - 20242599
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||    
T  20242740 gagttgtatgtagatatacacaagtgggtcatttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcact 20242641  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  20242640 agttgctcaaagcggtgtttagcggtgaggacttatgtcctg 20242599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 128 - 296
Target Start/End: Original strand, 23066673 - 23066842
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  23066673 gttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 23066772  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcgg 296  Q
    ||| |||||| |||||| || ||||| ||||||||||||||  || |||||||||||||||| |||||||    
T  23066773 ttgctcaaagtggtgtttagtggtgatgacttatgtcctgaaaatgaatgctttaaccattctacagcgg 23066842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 27280393 - 27280192
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||||| |||||||||||||||||| ||||||||   || |||||||| ||||||  |||||||     
T  27280393 gtatgtagatatactcaaggggattagttgcataaacataacagtgggagagcttcggctctggaacgctcggtcgttcaaagtggtggagtactagtta 27280294  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  27280293 ctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 27280195  T
Q  331 cat 333  Q
    |||    
T  27280194 cat 27280192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 3706707 - 3706939
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || |  |||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||    
T  3706707 gtcatatacatatatatgcataggttggattgtatgtagatatactcaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgc 3706806  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||| ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| |    
T  3706807 cttgtcgttcaaagtggtggagcactaattgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtg 3706905  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     |||  |||| |||| | | |||||||||||||||    
T  3706906 agggctacggtcctg-attttggtaccacatgcat 3706939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 19778430 - 19778596
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| |||||| |||||| ||| |||| ||||| || |||||  ||||| ||||||| ||||||||||||||||||||    
T  19778430 agttgtatgtagatatacacaagtggagttagttgcataaacatgaaagcgggagggcctcggccctggaatgccttgtcgttcaaagcggtggaacact 19778529  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg--atgataatgctttaaccattcga 290  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |  | ||||||||||||||||||    
T  19778530 agttgttcaaagctgtgtttagcggtgaggacttatgtcctggaaaaagaatgctttaaccattcga 19778596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 19961370 - 19961135
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| || ||||   ||||||    
T  19961370 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagggcctcggtcctggaac 19961271  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagc 294  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||| |||   | |||||||||||||||| | |||    
T  19961270 gccttgtcgttcaaagcggtggaacactatgttgttcgaagcggtgtt-agcggtgaggactcatgtccggataaaagaatgctttaaccattctatagc 19961172  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    || | |||   |||| |||  ||||||||||||||||||    
T  19961171 ggtgagggctccggctctg--atatggtaccacatgcat 19961135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 20941826 - 20942034
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||  |||   ||  ||||||||||||| ||||||||||||||||||||    
T  20941826 agttgtatgtagatatacacaagtgggtcagttgcataagcatataaagcgggaaggctcttgccctggaacgccttgtcgttcaaagcggtggaacact 20941925  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggta 323  Q
      |||||||||||||||| | |||||||||||||||||||||||    ||||||||||||||||  | ||||| | |||   |||||||| |||||||||    
T  20941926 ttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaaatgaatgctttaaccattcaaatagcggtgagggctccggccctg-aatatggta 20942024  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  20942025 ccacatgcat 20942034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 16883510 - 16883674
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaa-gcggtggaacac 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||  ||||||||||||| ||||||| ||||||||||||    
T  16883510 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctctggccctggaacgccttgtcgttcaaaagcggtggaacac 16883609  T
Q  225 ta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |  |||||||||||||||| | |||||||||||||||||||||||    ||||||||||||||||    
T  16883610 tttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaaatgaatgctttaaccattc 16883674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 268
Target Start/End: Original strand, 20838140 - 20838280
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataa-aagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||| ||||| | ||| ||  ||||| ||||||| |||||||| ||||||||| | |    
T  20838140 ttgtatgtggatatacacaagtgggttagttgcataagcataataagcgggagggattctgccctggaatgccttgtcgttcaaagtggtggaacatttg 20838239  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  20838240 ttgttcaaagcggtgtttagcggtgaggactcatgtcctga 20838280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 20824329 - 20824445
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcataa-aagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| ||||| ||||| ||| | ||||||||||| |||||||| |||||||||||    
T  20824329 agttgtatgtagatatacacaagtaggttagttgcataagcataataagcgggagggcttctgctctagaacgccttgtcgttcaaagaggtggaacact 20824428  T
Q  226 agttgttcaaagcggtg 242  Q
     ||||||||||||||||    
T  20824429 tgttgttcaaagcggtg 20824445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 955010 - 955128
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||||| ||||||||    
T  955010 gtcatatacatatatatgcatgggttgggttgtatgtagatatacacaagtgggtcagtagcatgagcataaaagtggaagagcttcggctctggaacgc 955109  T
Q  200 cttgttgttcaaagcggtg 218  Q
    ||||| |||||||| ||||    
T  955110 cttgtcgttcaaagtggtg 955128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 22448241 - 22448440
Alignment:
Q  128 gttgtatgtagatatacacaagtgggt----tagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||||||||||||||||||||    || | |||||||||||||||| | |||||||||||| ||||||||||||| |||||||| |||||| ||    
T  22448241 gttgtatgtagatatacacaagtgggtcaattaattgcataagcataaaagtagaagagcttcggctctggaacgccttgtcgttcaaagtggtggagca 22448340  T
Q  224 ctagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    ||||||| ||||          || |||||||||||||||||||   || |||||||||||||||| ||||||| | |||  ||||||||| | ||||||    
T  22448341 ctagttgctcaa----------agtggtgaggacttatgtcctgtaaatgaatgctttaaccattcaacagcggtgagggctacggccctg-attatggt 22448429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 24108965 - 24109082
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  |||||||    
T  24108965 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctggaacg 24109064  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  24109065 ccttgtcgttcaaagcgg 24109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 400
Target Start/End: Original strand, 21987118 - 21987210
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  21987118 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttgattga 21987210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 241
Target Start/End: Complemental strand, 21732683 - 21732569
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||  |||  | |||||||| || ||||||||||||||||||||    
T  21732683 agttgtatgtagatatacacaagtggagtcagttgcataagcataaa-gcgggagggctctggccctagaacgcctcgtcgttcaaagcggtggaacact 21732585  T
Q  226 agttgttcaaagcggt 241  Q
     |||||||||||||||    
T  21732584 tgttgttcaaagcggt 21732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 19666701 - 19666791
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  |||||||||||||||||||||||||    
T  19666701 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgttgttcaaagcgg 19666791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 36615018 - 36614870
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    |||||||||||||||||||||||||  |||||||||||||||| | ||||| | ||||  ||||||||   | |||||||||||||||| ||||| || |    
T  36615018 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaagcggtgagggtttcggccctg--ttttggtaccacatgcataattgcatttat 36614923  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| |||||  ||| |||| |||||||||| |||||||||||||    
T  36614922 tgaggggtcttagtggtgtcttcatgtca-tgcatgagtctttgttgttggttg 36614870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 16371746 - 16371501
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||| || | ||||| ||||||| ||||||| || |||| ||    
T  16371746 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttgggttctggaaagccttgtcgttcaaaacgatggagca 16371647  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||||||||||||||   | |||||||||||||||| | | ||  | |||   |||| |||  |||||    
T  16371646 ctatgttgttcaaaacgatgtt-aacgatgaggacttatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctg--atatg 16371550  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||| |||||| |||| | |||||||||| || |||||||    
T  16371549 gtaccacatgcatggttgcatttgttgaggagtcttagtggagttgtca 16371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 20852033 - 20852278
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  20852033 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 20852132  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  20852133 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 20852229  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  20852230 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 20852278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 20858659 - 20858904
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  20858659 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 20858758  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  20858759 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 20858855  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  20858856 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 20858904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 21664370 - 21664280
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  21664370 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 21664280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 355
Target Start/End: Original strand, 23195568 - 23195675
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||||||||  ||||||||||||||||  ||||||| | |||   |||||||| |||||||||||||||||||| ||||| |||    
T  23195568 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaacagcggtgagggcttcggccctg-aatatggtaccacatgcatatttgcatttg 23195664  T
Q  345 tcggggagtct 355  Q
    | | |||||||    
T  23195665 ttgaggagtct 23195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 15316447 - 15316565
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||    
T  15316447 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaac 15316546  T
Q  198 gccttgttgttcaaagcgg 216  Q
    || |||| |||||||||||    
T  15316547 gcattgtcgttcaaagcgg 15316565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 18711949 - 18711883
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggtt 84  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  18711949 gttgaatgaacttgatgtattagtatgattgttattaattatacatttttctgatgttggattggtt 18711883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 19853241 - 19853151
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||| ||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  19853241 agttgtatgtagatatacacaattggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 19853151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 19859376 - 19859286
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||| ||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  19859376 agttgtatgtagatatacacaattggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 19859286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 21705431 - 21705186
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  21705431 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 21705332  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  21705331 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 21705235  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  21705234 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 21705186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 390
Target Start/End: Complemental strand, 11157047 - 11156904
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||||||    |||||||||||||||| |  || || | |||   |||||||||| |||||||||||| ||||||||||| |||    
T  11157047 agcggtgaggacttatgtcctgaacg-aatgctttaaccattcaattagtggtgagggcttcggccctgaa-tatggtaccacacgcatagttgcacttg 11156950  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    | | |||||||| || |||| |||| || |||||||||||||||||    
T  11156949 ttgaggagtcttggaagtgtagtcatgttattgcatgagtcgttgt 11156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 20849037 - 20848958
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||| |||||| |||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  20849037 tggtaccacatgcattgttgca-ttgtcgaggagtcttagcggtgttgtccagtagttgcatgagtcattgttgttggttg 20848958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 20086446 - 20086540
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||||||| ||   | |||||| |||||||| ||||| ||||  ||  ||||||||||||| |||||||||||    
T  20086446 gtggagttgtatgtagatatacacaagtggagtccattgcataaacataaaagcgggagggcttatgccctggaacgccttgtcgttcaaagcgg 20086540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 23195443 - 23195533
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||| |||| || ||| ||||||||||||||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  23195443 agttgtatgtagatatacacatgtggagtcagttgcataagcataaaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 23195533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 24079790 - 24079672
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcat-aaaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| | | ||||||||||||| |||||||||||| || ||||||||| |||| ||||| ||||| ||||| ||  ||||||    
T  24079790 gtcatatacatatatatgcatttggtcgagttgtatgtaggtatacacaagtgagtcagtcgcatatgcataaaaagcgggagggcttctgccctggaac 24079691  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||| | | |||||||||||    
T  24079690 gccatatcgttcaaagcgg 24079672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 11157255 - 11157127
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| ||||| |||| ||||| |||      
T  11157255 atggagtcgtaagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagcatgaaagcgggagggctct 11157157  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
     ||  |||||||||| || |||||||||||    
T  11157156 agccctggaacgcctcgtcgttcaaagcgg 11157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 20108731 - 20108783
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  20108731 ggagtcttagtggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 20108783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 31927611 - 31927671
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||||    
T  31927611 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttgaa 31927671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 41312125 - 41312073
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  41312125 ggagtcttagcggtgttgtcaagtagttgcatgagtcgttgttgttggttgaa 41312073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 29535070 - 29535019
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  29535070 tggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtg 29535019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 43088474 - 43088326
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    ||||||||||||||||||||| ||||  || |||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||| ||||| || |    
T  43088474 agcggtgaggacttatgtcctaatga--atactttaaccattcaaaagcggtgagggcttcggtcctgt--tttggtaccacatgcataattgcatttat 43088379  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | |||||||||| ||||| |||| |||| |||||||||| ||| |||||||||    
T  43088378 tgaggagtcttagtggtgtcgtcatgtca-tgcatgagtctttgatgttggttg 43088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 23712461 - 23712403
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  23712461 attgtcgaggagtcttagcggtgttgtctagtagttgcatgagtcgttgttgttggttg 23712403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 340
Target Start/End: Complemental strand, 24079637 - 24079544
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc--gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||||||||  ||||||||||||||||   ||||||| | |||   |||||||| | |||||||||||||||||| |||||    
T  24079637 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaacagcggtgagggcttcggccctg-attatggtaccacatgcatatttgca 24079544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 24109117 - 24109210
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc--gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||||||||  ||||||||||||||||   ||||||| | |||   |||||||| | |||||||||||||||||| |||||    
T  24109117 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaacagcggtgagggcttcggccctg-attatggtaccacatgcatatttgca 24109210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 7792987 - 7793047
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||| | |||||||||| ||||| |||| |||| |||||||||||||||||    
T  7792987 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtcagtgcatgagtcgttgttg 7793047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 11140970 - 11141062
Alignment:
Q  126 gagttgtatgtagatatacacaagt-gggttagtcgcataagcat-aaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||| | ||||||  ||||||||| ||||| ||||| |||  |||  ||||||||||||| |||| ||||||    
T  11140970 gagttgtatgtagatatacacaagtagagttagttacataagcataaaaagcgggagggctctggccctggaacgccttgtcgttctaagcgg 11141062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 5380698 - 5380635
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||| ||| |||| | |||||||||| |||||||||| |||||||||||  |||||||||    
T  5380698 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatggatcgttgttg 5380635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 8682916 - 8682877
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  8682916 gtgttgtcatgtcattgcataagtcgttgttgttggttga 8682877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 21410644 - 21410735
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||| | |||||||||||    
T  21410644 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttttcgttcaaagcgg 21410735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 24959877 - 24959826
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||| ||||||||||||||||||||    
T  24959877 gagtcgtagtggagttgtcatgtcattgcataagtcgttgttgttggttgaa 24959826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 16669433 - 16669502
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  16669433 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 16669502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 25092578 - 25092628
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    |||||||||  ||||||||| |||||||||||||||||||| | |||||||    
T  25092578 gagtcttagcagtgttgtcatgtcattgcatgagtcgttgtcgatggttga 25092628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 30491622 - 30491680
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||| ||||||||||||||    
T  30491622 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagttgttgttgttggttg 30491680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 49328047 - 49327970
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggt 397  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||    
T  49328047 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggt 49327970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 955116 - 955180
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacag 293  Q
    |||||||| |||||| || ||||||| ||||||||||||  || |||||||||||||||| ||||    
T  955116 gttcaaagtggtgtttagtggtgagggcttatgtcctgaaaatgaatgctttaaccattctacag 955180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 20849236 - 20849192
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  20849236 agttgtatgtagatatacacaagtggagtcagttgcataagcata 20849192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 21698308 - 21698280
Alignment:
Q  124 tggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||||||||||||||||||||||    
T  21698308 tggagttgtatgtagatatacacaagtgg 21698280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 21734641 - 21734701
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||| | |||||||||| ||||| |||| ||||  ||||||||||||||||    
T  21734641 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtcagcgcatgagtcgttgttg 21734701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 21745846 - 21745906
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||| | ||||||||||  |||| |||| |||| |||||||||||||||||    
T  21745846 atagttgcatttgttgaggagtcttagtcgtgtcgtcatgtcagtgcatgagtcgttgttg 21745906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 23195684 - 23195732
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  23195684 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 23195732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 42096111 - 42096159
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  42096111 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 42096159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 112)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 88 - 402
Target Start/End: Complemental strand, 17157305 - 17156993
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  17157305 atggagttgtatgtcatatacataaatatgcattagttgagttgtatgtagatatacacaagggggttagttgcataagcataaaagtgggagagcttcg 17157206  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17157205 gctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccatt 17157106  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||| || | | ||||||||||||| | ||||| |||||| ||||||| ||    
T  17157105 cgacagcggtgtgggtcacggccctg-aatacggtaccacatgcatagttgcatttattgaggagtcttagagg-ggtgtcatgtcattacatgagttgt 17157008  T
Q  388 tgttgttggttgaat 402  Q
    | |||||| ||||||    
T  17157007 tattgttgattgaat 17156993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 88 - 402
Target Start/End: Original strand, 16802382 - 16802694
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||||||| |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16802382 atggagtcgtaagtcatatatacatatatgcattagttgagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 16802481  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  16802482 gctctggaacgccttgtcgttcaaagcggtagaacactagttgttcaaagcggtgttgagcggtgatgacttatgtcctgatgagaatgttttaaccatt 16802581  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||| | | ||||| |||||| ||||||| ||    
T  16802582 cgacagcggtgtgggtcacggccctg-aatatggtaccacatgcatagttgcatttatcgaggagtcttaga-gaggtgtcatgtcattacatgagttgt 16802679  T
Q  388 tgttgttggttgaat 402  Q
    ||| |||| ||||||    
T  16802680 tgtcgttgattgaat 16802694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 88 - 402
Target Start/End: Complemental strand, 24192006 - 24191694
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  24192006 atggagttgtatgtcatatacataaatatgcattagttgagttgtatgtagatatacacaagggggttagttgcataagcataaaagtgggagagcttcg 24191907  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  24191906 gctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgagaacttatgtcctgatgagaatgctttaaccatt 24191807  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||| | |||| ||||||||||||||||||||| || | | ||||||||||||| | ||||| |||||| ||||||| ||    
T  24191806 cgacagcggtgtgggtcacggccccg-aatacggtaccacatgcatagttgcatttattgaggagtcttagagg-ggtgtcatgtcattacatgagttgt 24191709  T
Q  388 tgttgttggttgaat 402  Q
    | |||||| ||||||    
T  24191708 tattgttgattgaat 24191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 89 - 401
Target Start/End: Complemental strand, 23174399 - 23174091
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcgg 188  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  23174399 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtgggtcagttgcaaaagcataaaagtgggagagcttcgg 23174301  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||    
T  23174300 ctcttgaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtt-agcggtgaggacttatgtcctga-aaaaatgctttaaccattc 23174203  T
Q  289 gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgtt 388  Q
    |||||||| |||||  |||| | || || ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||| | |    
T  23174202 gacagcggtgtgggctacggtcttg-aacatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcattacatgagttgct 23174104  T
Q  389 gttgttggttgaa 401  Q
    ||||||| |||||    
T  23174103 gttgttgattgaa 23174091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 111 - 340
Target Start/End: Original strand, 41456103 - 41456332
Alignment:
Q  111 acatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttca 210  Q
    ||||| |||||||| |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||    
T  41456103 acatatgcattagttgagttgtatgtagatatacacaggtgggatagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttca 41456202  T
Q  211 aagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggcc 310  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| ||||    
T  41456203 aagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagcggtgtgggtcatggcc 41456302  T
Q  311 ctgaaatatggtaccacatgcatagttgca 340  Q
    ||||| |||||||||||||||||| |||||    
T  41456303 ctgaattatggtaccacatgcataattgca 41456332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 9533056 - 9532842
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  9533056 gagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 9532957  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||| ||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9532956 agttgttcaaagtggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggtacc 9532857  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  9532856 acatgcatagttgca 9532842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 128 - 411
Target Start/End: Original strand, 17243651 - 17243935
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||  ||||| || ||| ||||||||||||||| ||||| ||||||||  | ||||| ||||| ||||||||||||||||||||     
T  17243651 gttgtatgtagatatacatcagtggagtcagttgcataagcataaaagcgggagggcttcggccctagaacgtcttgtcgttcaaagcggtggaacactt 17243750  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||| ||||| | |||   || ||||| |||||||||||    
T  17243751 gttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgactagcggtgagggctccgaccctg-aatatggtacc 17243849  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  17243850 acatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcattgcatcagtcgttgttgttggttgaattgctatatt 17243935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 117 - 399
Target Start/End: Original strand, 24123165 - 24123445
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  24123165 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 24123263  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  24123264 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 24123362  T
Q  316 atatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtca-ttgcatgagtcgttgttgttggttg 399  Q
     ||||||||||| |||||| ||||| || | | |||||| ||| |||||||||| |||| |||||||||||| ||||||||||||    
T  24123363 ttatggtaccacgtgcatatttgcatttattgaggagtc-tag-ggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 24123445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 13968795 - 13969017
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  13968795 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcata-gcatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcgg 13968893  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  13968894 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 13968992  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  13968993 ttatggtaccacatgcatatttgca 13969017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 13974270 - 13974492
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  13974270 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcata-gcatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcgg 13974368  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  13974369 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 13974467  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  13974468 ttatggtaccacatgcatatttgca 13974492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 92 - 398
Target Start/End: Complemental strand, 18900248 - 18899940
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggct 190  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||| ||||||||     
T  18900248 agtcgtatgtcatatatatacatatgcattagttgagttgtatgtagatatacacaagtggagtcggttgcataagcataaaagcgggagggcttcggcc 18900149  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcg 289  Q
     ||||||||||||| ||||||| ||||||||||| | ||||||||||||| |||| || ||||||||||||||||||||  | |||||||||||||||||    
T  18900148 ctggaacgccttgtcgttcaaatcggtggaacactttgttgttcaaagcgatgtttagaggtgaggacttatgtcctgaaaaaaatgctttaaccattcg 18900049  T
Q  290 a-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgtt 388  Q
    |  ||||| | |||    ||||||| |||||||||||||||||||||||||| |||| | ||||||||||| |||| |||| |||||||||| |||||||    
T  18900048 attagcggtgagggctctggccctg-aatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcataagtcgtt 18899950  T
Q  389 gttgttggtt 398  Q
    || |||||||    
T  18899949 gtcgttggtt 18899940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 121 - 385
Target Start/End: Complemental strand, 12304959 - 12304698
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  12304959 tagttgagttgtatgtagatatacacaggtgagtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 12304860  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     ||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| | | ||    
T  12304859 gcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacaacggtgtgggtcacggccctg-attttg 12304762  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
     |||||||| |||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  12304761 ataccacatacatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 12304698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 14084746 - 14084524
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  14084746 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 14084648  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  14084647 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 14084549  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  14084548 ttatggtaccacatgcatatttgca 14084524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 14090147 - 14089925
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  14090147 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 14090049  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  14090048 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 14089950  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  14089949 ttatggtaccacatgcatatttgca 14089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 28 - 398
Target Start/End: Complemental strand, 18889290 - 18888901
Alignment:
Q  28 acttgatgtattagtatgattgacattaattatacatttt-ctgatgttggattggttg------ag----------atggagtcgtatgtcatatacat 110  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||      ||          ||| |||||||||||||||| ||    
T  18889290 acttgatgtattggtatgattgatattaattatacatttttctgatgttggattggttgtaatgaagttgttgaattatgaagtcgtatgtcatatatat 18889191  T
Q  111 acatacgcattagtggagttgtatgtagatatacacaagtg-ggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttc 209  Q
    ||||| |||||| | ||||||||||||||||||||||||||  ||  || ||| ||||||||||| ||||| ||||||||  ||||||||||||| ||||    
T  18889190 acatatgcattacttgagttgtatgtagatatacacaagtgcagtcggttgcacaagcataaaagcgggagggcttcggccctggaacgccttgtcgttc 18889091  T
Q  210 aaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacg 307  Q
    ||||||||||||||| |  ||||||||||||||||| || | ||||||||||||||||||  | ||||||||||||||||||  ||||| | |||   ||    
T  18889090 aaagcggtggaacactttattgttcaaagcggtgttcagtgatgaggacttatgtcctgaaaagaatgctttaaccattcgattagcggtgagggctccg 18888991  T
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||| |||||||||||||||||||||||||| |||| | ||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  18888990 gccctg-aatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgtcgttggtt 18888901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 176 - 402
Target Start/End: Complemental strand, 17190992 - 17190768
Alignment:
Q  176 gggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataat 275  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  17190992 gggagagcttcggctctggaacgccttgtctttcaaagcggtggaacactagttgttcaaagcggtgttgatcggtgaggacttatgtcctgatgagaat 17190893  T
Q  276 gctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcat 375  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||| || | | ||||||||||||| | ||||| |||||    
T  17190892 gctttaaccattcgacaacggtgtgggtcacggccctg-aatttggtaccacatgcatagttgcatttattgaggagtcttagagg-ggtgtcatgtcat 17190795  T
Q  376 tgcatgagtcgttgttgttggttgaat 402  Q
    | ||||||| ||| |||||| ||||||    
T  17190794 tacatgagttgttattgttgattgaat 17190768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 49399688 - 49399466
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  49399688 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 49399590  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||| |    
T  49399589 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctggtgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 49399491  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  49399490 ttatggtaccacatgcatatttgca 49399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 8583256 - 8583478
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || ||||||||||||||||| || | || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  8583256 gcatttgttgagttgtatgtagatatccataggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 8583354  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  8583355 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 8583453  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  8583454 ttatggtaccacatgcatatttgca 8583478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 12200403 - 12200203
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||| |||||| |||||||||    
T  12200403 gtatgtagatatactcaagtgggtaagttgcataagcataacagtgggagagcttcagctctggaacaacttgtcgttcaaagtggtggagcactagttg 12200304  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | | ||||||||||||    
T  12200303 ctcaaagtggtgtt-agtggtgagaacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-attttggtaccacatg 12200206  T
Q  331 cat 333  Q
    |||    
T  12200205 cat 12200203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 14544163 - 14544368
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||    
T  14544163 gttgtatgtagatatacacaagcgggtcagttgcataagcataaaagtgggagagcttcggctctagaacgccttgtcgttcaaagtggtggaacactag 14544262  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| ||||||||||||| || ||||||||||||||||||| |  | |||||||||||||||||||| ||| | |||  |||| |||| | ||||||||||    
T  14544263 ttgctcaaagcggtgtttagtggtgaggacttatgtcctgaaaaagaatgctttaaccattcgacaacggtgagggctacggtcctg-attatggtacca 14544361  T
Q  327 catgcat 333  Q
    |||||||    
T  14544362 catgcat 14544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 14652688 - 14652892
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  14652688 gttgtatgtagatatacacaagtgggtcagttgcataagcataatagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 14652787  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  14652788 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 14652885  T
Q  327 catgcat 333  Q
    |||||||    
T  14652886 catgcat 14652892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 402
Target Start/End: Complemental strand, 18914213 - 18913937
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||| |||   |   |||||| |||||| |||||||| |||||||||||    
T  18914213 agttgtatgtagatatacacaagtgggtcagttgcataagcatataaagcgggagggctattgtcctggaacaccttgtcgttcaaagtggtggaacact 18914114  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggta 323  Q
      |||||||||||||||||| || || || ||||||||||||||    |||||||||||||||| |  ||||| | |||   ||||| |||| |||||||    
T  18914113 ttgttgttcaaagcggtgtttag-ggagatgacttatgtcctgaaatgaatgctttaaccattcaattagcggtgagggcttcggccttgaa-tatggta 18914016  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  18914015 ccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcaatgcatgagtcgttgttgttggttgaat 18913937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 12961345 - 12961580
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||| ||||||||||||||||||||||| ||| ||||||| ||||||| || || ||||||||  |||||||    
T  12961345 gtcatatacatatatatgcatttggttgagttttatgtagatatacacaagtgggtcagttgcataagtataaaagcggaagggcttcggccctggaacg 12961444  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcga-cagcgg 296  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  || |||||||||||||||| |  |||||    
T  12961445 ccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgatgacttatgtcctgaaaatgaatgctttaaccattcaattagcgg 12961544  T
Q  297 cgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
     | ||||  |||||||| | |||||||||||||||||    
T  12961545 tgagggtttcggccctg-attatggtaccacatgcat 12961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 126 - 330
Target Start/End: Complemental strand, 14292911 - 14292706
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||    
T  14292911 gagttgtatgtagaaatatacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcgttggagcact 14292812  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga--taatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |  |   |||||||||||||||| ||||||| | |||   |||||||| | |||||||    
T  14292811 agttgctcaaagcggtgtttagcggtgaggacttatgtcctaaaaaatgaatgctttaaccattctacagcggtgagggcttcggccctg-attatggta 14292713  T
Q  324 ccacatg 330  Q
    |||||||    
T  14292712 ccacatg 14292706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 126 - 340
Target Start/End: Original strand, 31690565 - 31690781
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||     
T  31690565 gagttgtatgtagatatacacaagtgggtcagttgcataaacataaaagcgggagggcttcggctctggaacgccttgtcgttcaaagcggtggaacact 31690664  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||| ||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||  ||||| | |||   |||||||| ||||||||    
T  31690665 ttgttgtttaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aatatggt 31690763  T
Q  323 accacatgcatagttgca 340  Q
    |||||||||||| |||||    
T  31690764 accacatgcatatttgca 31690781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 13909728 - 13909529
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| |||||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||     
T  13909728 gtatgtagatatactcaag-gggttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtta 13909630  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  13909629 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 13909532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 13940187 - 13939988
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| |||||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||     
T  13940187 gtatgtagatatactcaag-gggttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtta 13940089  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  13940088 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 13939991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 13203511 - 13203715
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  13203511 gttgtatgtagatatactcaagtgggttagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 13203610  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || |||||||||||| |||||||  || ||||||||||| |||| ||||||| | |||  |||| ||||   ||||||||||    
T  13203611 ttgctcaaagtggtgtt-agtggtgaggacttaggtcctgaaaatgaatgctttaactattctacagcggtgagggctacggtcctg-tttatggtacca 13203708  T
Q  327 catgcat 333  Q
    |||||||    
T  13203709 catgcat 13203715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 16382852 - 16383056
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| | |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  16382852 gttgtgtgtagatatacacaagtgggtcagttgcataagcattacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 16382951  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  16382952 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtacca 16383049  T
Q  327 catgcat 333  Q
    |||||||    
T  16383050 catgcat 16383056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 34852178 - 34852451
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| |||||||||| ||||||||||||| ||||||||||||| |||||||| |||||| |||    
T  34852178 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgagagagcttcggctctggaacgccttgtcgttcaaagtggtggagcac 34852277  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||| ||| | |||  ||||||||| |||||||||    
T  34852278 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacaacggtgagggctacggccctg-aatatggta 34852376  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||    || ||||| | |||||||||| || || ||   ||  |||||||||||||||||||||||||||    
T  34852377 ccacatgcat--gcgc-attgttgaggagtcttagtggagtcgttgagtagttgcatgagtcgttgttgttggttgaa 34852451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 129 - 333
Target Start/End: Original strand, 16838475 - 16838677
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  16838475 ttgtatgtagatatactcaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 16838574  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    || |||||| |||||| || |||||||||||||||||||   || |||||||||||||||| ||||||| | || | |||| |||| | |||||||||||    
T  16838575 tgctcaaagtggtgtt-agtggtgaggacttatgtcctggaaatgaatgctttaaccattctacagcggtgaggct-acggtcctg-attatggtaccac 16838671  T
Q  328 atgcat 333  Q
    ||||||    
T  16838672 atgcat 16838677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 31943650 - 31943434
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| |||| | ||| ||||||||| |||||||||||||||||||||||||||||||||     
T  31943650 gagttgtatgtagatatacacaagtgggtcagttgcataagcatgaaagcgagagggcttcggctctggaacgccttgttgttcaaagcggtggaacact 31943551  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||||| ||||||||||||| || ||||| |  | |||| |||||||||||||   |||| | |||   |||||||| ||||||||    
T  31943550 ttgttgttcaaagcggtgtttagcggtgaggactcatttcctgaaaaagaatgttttaaccattcgatttgcggtgagggcttcggccctg-aatatggt 31943452  T
Q  323 accacatgcatagttgca 340  Q
    |||||||||||| |||||    
T  31943451 accacatgcatatttgca 31943434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 13946673 - 13946474
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| |||||||| |||| | ||||| |||||||||| ||||||| ||||| || | || |||||||| ||||||  |||||||     
T  13946673 gtatgtagatatactcaag-gggttagttgcattaacataacagtgggagagtttcggctctggaatgcttagtcgttcaaagtggtggagtactagtta 13946575  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  13946574 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 13946477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 126 - 290
Target Start/End: Original strand, 17199010 - 17199175
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaa-agtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||||||||||||||||||||  || |||||  |||| | || ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17199010 gagttgtatgtagatatacacaagtgggtcggttgcatagtcatatacagcgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacac 17199109  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |  | ||||||||||||||||||    
T  17199110 tagttgttcaaagcggtgtt-agcggtgaggacttaggtcctgtaaaagaatgctttaaccattcga 17199175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 8742909 - 8743086
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  8742909 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 8743006  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  8743007 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattttggtaccacatgcat 8743086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 8761079 - 8761256
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  8761079 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 8761176  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  8761177 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattttggtaccacatgcat 8761256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 4677341 - 4677164
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  4677341 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 4677244  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  4677243 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttatggtaccacatgcat 4677164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 41175654 - 41175477
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  41175654 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 41175557  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  41175556 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttatggtaccacatgcat 41175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 41180792 - 41180615
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  41180792 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 41180695  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  41180694 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttatggtaccacatgcat 41180615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 110 - 333
Target Start/End: Complemental strand, 19443696 - 19443469
Alignment:
Q  110 tacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttg 206  Q
    |||||| |||||||| ||||||||||||||||||||||||| || || ||| ||||||||||||||| || ||| ||||| ||  ||||||||||||| |    
T  19443696 tacatatgcattagttggagttgtatgtagatatacacaagcggagtcagttgcataagcataaaagcggtgagggcttctgccctggaacgccttgtcg 19443597  T
Q  207 ttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggt 303  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||   | |||||||||||||||| | ||||| | |||     
T  19443596 ttcaaagcggtggaacacattgttgttcaaagcggtgtttagcggtgaggactcatgtcctgataaaagaatgctttaaccattctatagcggtgagggc 19443497  T
Q  304 cacggccctgaaatatggtaccacatgcat 333  Q
      ||||||||   |||||||||||||||||    
T  19443496 tccggccctg--ttatggtaccacatgcat 19443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 333
Target Start/End: Original strand, 11964865 - 11965080
Alignment:
Q  120 ttagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||| ||||| ||||| ||| ||||  ||||||||| ||| |||||||| ||||    
T  11964865 ttagcggagttgtaagtagatatacacaagtggagttagttgcataagcacaaaagcgggagggctccggccctggaacgccatgtcgttcaaagtggtg 11964964  T
Q  219 gaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaa 316  Q
    |||||||  |||||||||||||||||| ||||||||||||||| |||||||    |||||||||||||||| |  ||||| | |||   |||||||| ||    
T  11964965 gaacactttgttgttcaaagcggtgtttagcggtgaggacttaggtcctgaaatgaatgctttaaccattctattagcggtgagggctccggccctg-aa 11965063  T
Q  317 tatggtaccacatgcat 333  Q
    |||||||||||||||||    
T  11965064 tatggtaccacatgcat 11965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 44775378 - 44775201
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  44775378 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 44775281  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  44775280 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 44775201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 44780562 - 44780385
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  44780562 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 44780465  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  44780464 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 44780385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 385
Target Start/End: Original strand, 38312118 - 38312378
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||| || |||  | ||||   ||||||||||||| |||||||||||||||||||     
T  38312118 agttgtatgtaaatatacacaagtgggtcagttgcataagcataaaagcggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacacc 38312217  T
Q  226 a-gttg-ttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    | |||| |||||||||||||| ||||||||||||| ||||||||||    | |||| ||||||||||| | | ||| | |||   ||||||||  |||||    
T  38312218 atgttgtttcaaagcggtgtt-agcggtgaggactcatgtcctgataaaaagaatgttttaaccattctataacggtgagggctccggccctg--atatg 38312314  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  38312315 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 38312378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 18719077 - 18719269
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||| ||| ||||||| || |||| | ||| | ||||||  |||||||    
T  18719077 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtgggtcagttgcataagtat-aaagcgtgagggtttcggccctggaacg 18719175  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    |||| | ||||||||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  18719176 ccttctcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 18719269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 23174004 - 23173876
Alignment:
Q  90 ggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggc 189  Q
    ||||| ||| |||||||| | | ||| ||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  23174004 ggagttgtaagtcatatatacatatatgcattagttaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgtgagagcttcggc 23173905  T
Q  190 tttggaacgccttgttgttcaaagcggtg 218  Q
    | ||||||||||||| |||||||||||||    
T  23173904 tctggaacgccttgtcgttcaaagcggtg 23173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 125 - 269
Target Start/End: Original strand, 13313905 - 13314051
Alignment:
Q  125 ggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  13313905 ggagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagggcttctgccctggaacgccttgtcgttcaaagcggtggaaca 13314004  T
Q  224 c-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgat 269  Q
    | | |||||||||| ||||| | || |||||||||| ||||||||||    
T  13314005 cattgttgttcaaaacggtgattagtggtgaggactcatgtcctgat 13314051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 16829952 - 16830065
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  16829952 ttgtatgtagatatactcaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 16830051  T
Q  229 tgttcaaagcggtg 242  Q
    || |||||| ||||    
T  16830052 tgctcaaagtggtg 16830065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 269
Target Start/End: Original strand, 13303228 - 13303375
Alignment:
Q  124 tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    |||||||||||||||||||| |||||||||| ||| |||||| |||||||| || ||| ||||| ||  ||||||||||||| |||||||||||||||||    
T  13303228 tggagttgtatgtagatatatacaagtgggtcagttgcataaacataaaagcggtgagggcttctgccctggaacgccttgtcgttcaaagcggtggaac 13303327  T
Q  223 ac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgat 269  Q
    || | |||||||||| ||||| | ||||||||||||| ||||||||||    
T  13303328 acattgttgttcaaaacggtgattagcggtgaggactcatgtcctgat 13303375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 268
Target Start/End: Original strand, 18129772 - 18129915
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| ||   |||  ||||||||||||| |||||||||||||||||||     
T  18129772 agttgtatgtagatatacacaagtggagttagttgcataagcatgaaagcgggagggccctggccctggaacgccttgtcgttcaaagcggtggaacact 18129871  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    | |||||||||||||||| | || ||||||||||||||||||||    
T  18129872 ttgttgttcaaagcggtgattagtggtgaggacttatgtcctga 18129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 125 - 269
Target Start/End: Original strand, 13324817 - 13324963
Alignment:
Q  125 ggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||||||| || ||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  13324817 ggagttgtatgtagatatacacaagtgggtcagttgcataagtataaaagcggtgagggcttctgccctggaacgccttgtcgttcaaagcggtggaaca 13324916  T
Q  224 c-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgat 269  Q
    | | ||||||||||  |||| | ||||||||||||| ||||||||||    
T  13324917 cattgttgttcaaaatggtgattagcggtgaggactcatgtcctgat 13324963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 12255358 - 12255215
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||| ||| ||||||| ||||| | ||||| ||||||||| |||||||    
T  12255358 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtgggtcagttgcataagtataaa-gcgggagggcttcggctctggaacg 12255260  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
    |||||| ||||||||||||||||||| | |||| |||||||||||    
T  12255259 ccttgtcgttcaaagcggtggaacactttgttgatcaaagcggtg 12255215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 18136286 - 18136448
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| |||||||||| |||| |||||     || |  |||||||||||||||||||||||||||||||||     
T  18136286 agttgtatgtagatatacacaagtggagtcagttgcataagcatgaaagcgggaggttcccgaccctggaacgccttgttgttcaaagcggtggaacact 18136385  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    | |||||||||||||||| | || ||||||||||||||||||| |||  ||||||||||||||||    
T  18136386 ttgttgttcaaagcggtgattagtggtgaggacttatgtcctgaatg--aatgctttaaccattc 18136448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 12479637 - 12479791
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| ||  |||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||      
T  12479637 atggagtcgtaagtcatatatacatatatgcatt-gtcaagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctct 12479735  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtg 242  Q
    |||  |||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  12479736 ggccctggaacgcctcgtcgttcaaagcggtggaacacttgttgttcaaagcggtg 12479791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 10597701 - 10597791
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||  ||||||||||||| |||||||||||    
T  10597701 gagttgtatgtagatatacacaagtgagttagtcgcataagcataaaagcgggagggcttctgccctggaacgccttgtcgttcaaagcgg 10597791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 23371844 - 23372104
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  23371844 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 23371943  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  23371944 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 23372040  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  23372041 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 23372104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 12362451 - 12362605
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||| ||| |||||||| | | ||| ||||| ||| ||| |||||||||||||||||||||| || ||| ||||||||||||||| || || |||      
T  12362451 atggagttgtaagtcatatatacatatatgcatt-gtgaagtggtatgtagatatacacaagtggagtcagttgcataagcataaaagcggaagggctct 12362549  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtg 242  Q
    |||  || ||||||| || ||||||||| |||||||||| ||||||||||||||||    
T  12362550 ggccctgcaacgcctcgtcgttcaaagcagtggaacacttgttgttcaaagcggtg 12362605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 18756930 - 18757020
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  |||||||||| || |||||||||||    
T  18756930 gagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctggaacgcctcgtcgttcaaagcgg 18757020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 12355944 - 12356056
Alignment:
Q  131 gtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||||||||||| || ||| ||||||||||||||| || || |||  |||  || ||||||| || ||||||||| |||||||||| |||    
T  12355944 gtatgtagatatacacaagtggagtcagttgcataagcataaaagcggaagggctctggccctgcaacgcctcgtcgttcaaagcagtggaacacttgtt 12356043  T
Q  230 gttcaaagcggtg 242  Q
    |||||||||||||    
T  12356044 gttcaaagcggtg 12356056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 12363572 - 12363445
Alignment:
Q  207 ttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtc 304  Q
    |||||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||    |||||||||||||||| |  ||||| | |||      
T  12363572 ttcaaagcggtggaacactttgttgttcgaagcggtgtttagcggtgaggacttatgtcctgaaatgaatgctttaaccattcaattagcggtgagggct 12363473  T
Q  305 acggccctgaaatatggtaccacatgcat 333  Q
     |||||||| |||||||||||||||||||    
T  12363472 ccggccctg-aatatggtaccacatgcat 12363445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 15518703 - 15518591
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||  ||||||||||| | |||||||||||||||||||     
T  15518703 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctctggccctggaacgccttatcgttcaaagcggtggaacact 15518604  T
Q  225 tagttgttcaaag 237  Q
    | |||||||||||    
T  15518603 ttgttgttcaaag 15518591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 42109118 - 42109046
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  42109118 tgcatagtcgcagttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 42109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 14764098 - 14764358
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  14764098 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 14764197  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| |  | |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  14764198 ctatgttgttcaaaacgatgttaat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 14764294  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  14764295 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 14764358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 51300311 - 51300051
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  51300311 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 51300212  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    | | |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  51300211 cgatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 51300115  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  51300114 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 51300051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 23173888 - 23173786
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    ||||||||||||||| |||||||||||||||||||||| |  | ||||||||||||||||||||| || | |||| ||  ||||| ||||||||||||||    
T  23173888 gttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaagaatgctttaaccattcgacagaggtgagggttac-accctg-aatatggtaccaca 23173791  T
Q  329 tgcat 333  Q
    |||||    
T  23173790 tgcat 23173786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 17496330 - 17496239
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  |||||||||| || |||||||||||    
T  17496330 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgcctcgtcgttcaaagcgg 17496239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 12419629 - 12419511
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcat-aaaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| |||| |||||  |||| ||||| ||  ||||||    
T  12419629 gtcatatacatatatatgcatttgatcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaaagcaggagggcttctgccatggaac 12419530  T
Q  198 gccttgttgttcaaagcgg 216  Q
    |||||||  ||||||||||    
T  12419529 gccttgtcattcaaagcgg 12419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 11305740 - 11305829
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||| ||||||||||||||||| |||| | ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  11305740 gttgtatatagatatacacaagtggagttacttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 11305829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 8374077 - 8374156
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || |||||||||||||||||| |||| |||||||||| |||||||||||||    
T  8374077 tggtaccacatgcatatttgcatttattgaggggtcttagaggtgttgtcatgtca-tgcatgagtctttgttgttggttg 8374156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 10390365 - 10390531
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  10390365 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 10390464  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  10390465 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 10390531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 10415474 - 10415640
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  10415474 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 10415573  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  10415574 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 10415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 10422144 - 10422310
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  10422144 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 10422243  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  10422244 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 10422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 11850594 - 11850721
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| || ||||||| ||||| || |||    
T  11850594 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagtataaaagcgggagggcctcg 11850692  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |   ||||||||||||| |||||||||||    
T  11850693 gtcctggaacgccttgtcgttcaaagcgg 11850721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 13692151 - 13692040
Alignment:
Q  107 acatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgt 204  Q
    ||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  |||||||||||||    
T  13692151 acatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgt 13692052  T
Q  205 tgttcaaagcgg 216  Q
     |||||||||||    
T  13692051 cgttcaaagcgg 13692040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 333
Target Start/End: Original strand, 16830050 - 16830178
Alignment:
Q  203 gttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgg 301  Q
    |||| |||||| |||||| ||||||||| |||||| |||||| || |||||||||||||||||||   || |||||||||||||||| ||||||| | ||    
T  16830050 gttgctcaaagtggtggagcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctggaaatgaatgctttaaccattctacagcggtgagg 16830148  T
Q  302 gtcacggccctgaaatatggtaccacatgcat 333  Q
     | |||| |||| | |||||||||||||||||    
T  16830149 ct-acggtcctg-attatggtaccacatgcat 16830178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 389
Target Start/End: Complemental strand, 10554014 - 10553818
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattc 288  Q
    ||||||||||||| ||||||| || |||||||| | |||||||||| || |||| | || |||||||| |||||||||| | |  |||||||||||||||    
T  10554014 tggaacgccttgtcgttcaaaacgatggaacacgatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattc 10553916  T
Q  289 gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgtt 388  Q
     ||| ||  | | |    ||| ||||  |||||||||||||||||||||||| |||| | |||||||||| || || |||| |||| |||||||||||||    
T  10553915 tacaacgatgagagctttggctctga--tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagtcgtcatgtca-tgcatgagtcgtt 10553819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 14289150 - 14289212
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgtt 391  Q
    |||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||    
T  14289150 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgtt 14289212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 357
Target Start/End: Original strand, 20249104 - 20249337
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || | | ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||| ||    
T  20249104 gagttgtatgtagatatacacaagtggagtcaattgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggagca 20249203  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| ||||||||||   | |||||||||||||||| | | ||  | ||||  |||| |||  |||||    
T  20249204 ctatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggtttcggctctg--atatg 20249300  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtctta 357  Q
    ||||||||||||| |||||| |||| | |||||||||    
T  20249301 gtaccacatgcatggttgcatttgttgaggagtctta 20249337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 18900330 - 18900266
Alignment:
Q  28 acttgatgtattagtatgattgacattaattataca--ttttctgatgttggattggttgagatg 90  Q
    ||||||| |||| |||||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  18900330 acttgatatattggtatgattgatattaattatacattttttctgatgttggattggttgtgatg 18900266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 288
Target Start/End: Original strand, 12034315 - 12034481
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  12034315 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 12034414  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    ||| |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  12034415 ctatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 12034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 9836 - 9785
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  9836 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 9785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 11644786 - 11644877
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  11644786 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 11644877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 11850781 - 11850847
Alignment:
Q  273 aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||| ||||||| | |||  ||||||||| |||||||||||||||||||| |||||    
T  11850781 aatgctttaaccattctacagcggtgagggctacggccctg-aatatggtaccacatgcataattgca 11850847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 17512788 - 17512726
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    |||||| ||| |||||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  17512788 tggagttgtaagtcatatacatatatatgcatt-gttgagttgtatgtagatatacacaagtgg 17512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 3802551 - 3802486
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  3802551 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 3802486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 12153100 - 12152971
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtg-ggttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||||||| ||| ||||| || ||||||||||||||||||||| ||||  || ||| ||||||||||| |||| ||||| |||     
T  12153100 atggagttgtaagtcatatacatatatatgcatt-gttgagttgtatgtagatatacactagtgaagtcagttgcataagcatataaagcgggagggctc 12153002  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      ||  ||||||||||||| ||||| |||||    
T  12153001 ttgccctggaacgccttgtcgttcatagcgg 12152971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 15012240 - 15012278
Alignment:
Q  363 gttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  15012240 gttgtcatgtcattgcatgagtcgttgttgttggttgaa 15012278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 17243459 - 17243549
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatga-cttgatgtattagtatgattgacattaattatacatt-ttctgatgttggattggttgagatg 90  Q
    |||||||||| || ||  ||||||||| ||||||||||| |||||||||  ||  |||||||||| |||||||||||||||||||| ||||    
T  17243459 caagtgaaaatatattatgttgaatgaacttgatgtattggtatgattgttatggattatacattgttctgatgttggattggttgcgatg 17243549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 30597011 - 30597083
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||||||||| ||||| || | | |||||||||| |||||||||| |||| |||||||||| ||||||    
T  30597011 tggtaccacatgcataattgcatttattgaggagtcttagtggtgttgtcatgtca-tgcatgagtcattgttg 30597083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 46723597 - 46723654
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    |||||||| |||||| |||||||||| |||||||||| ||||||||||| ||| ||||    
T  46723597 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtcattgcatgggtcattgt 46723654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 2270227 - 2270319
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcat-aaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| || |||  ||||||||| ||||| ||||| |||| |||  ||||| |||| || |||||||||||    
T  2270227 gagttgtatgtagatatacacaagtggagtcagtttcataagcataaaaagcgggagggctttggccctggaatgcctcgtcgttcaaagcgg 2270319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 13037185 - 13037237
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  ||||||||||| |||||||||||||||    
T  13037185 ggagtcttagcggtgttgtcaagtagttgcatgagtctttgttgttggttgaa 13037237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 17130713 - 17130661
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||||||| |||| | |||||||||| || |||||||    
T  17130713 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 17130661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 10597826 - 10597866
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  10597826 agcggtgaggacttatgtcctgatg--aatgctttaaccattc 10597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 12255803 - 12255748
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggt 154  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||||||    
T  12255803 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtgggt 12255748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 12419476 - 12419436
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  12419476 agcggtgaggacttatgtcctgatg--aatgctttaaccattc 12419436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 14569779 - 14569724
Alignment:
Q  344 gtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  14569779 gtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 14569724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 15232060 - 15232021
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  15232060 gtgttgtcatgtcattgcataagtcgttgttgttggttga 15232021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 15237928 - 15237889
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  15237928 gtgttgtcatgtcattgcataagtcgttgttgttggttga 15237889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 15935185 - 15935243
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  15935185 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 15935243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 16823937 - 16823995
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||| ||||||||||||||    
T  16823937 attgtcgaggagtcttagcggtgttgtcgagtatttgcatgagttgttgttgttggttg 16823995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 14864804 - 14864763
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  14864804 tatggtaccacatgcatagttgcatttgttgaggagtcttag 14864763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 8583502 - 8583550
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  8583502 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 8583550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 12034508 - 12034560
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||| ||||| |||| | |||||||||| || |||||||    
T  12034508 tatggtaccacatgcatatttgcatttgttgaggagtcttagtggagttgtca 12034560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 13969069 - 13969117
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  13969069 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 13969117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 13974544 - 13974592
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  13974544 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 13974592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 14864997 - 14864949
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  14864997 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaa 14864949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 15374694 - 15374615
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||||  |||| || | | |||||||||| ||||| |||| |||| |||||||||| || ||||||||||    
T  15374694 tggtaccacatgcatatctgcatttattgaggagtcttagtggtgtcgtcatgtca-tgcatgagtctttattgttggttg 15374615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 19235968 - 19236016
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  19235968 gagttgtatgtagatatacactagtggagtcagttgcataagcataaaa 19236016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 19236167 - 19236233
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||||| ||||| | ||||||||||  | ||||||| ||| |||||||||||    
T  19236167 tatggtaccacatgcatagttgc-attgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtc 19236233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 24284653 - 24284705
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  ||||||||||||||| |||| ||||||    
T  24284653 ggagtcttagtggtgttgtcatgtagttgcatgagtcgttgctgttagttgaa 24284705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 54520056 - 54519977
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | ||||| |||| |||||||||| |||| |||||||||| | |||||||||||    
T  54520056 tggtaccacatgcataattgcatattttgaggagtattagtggtgttgtcatgtca-tgcatgagtcttagttgttggttg 54519977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 402
Target Start/End: Original strand, 14 - 412
Alignment:
Q  3 aagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattt-tctgatgttggattggttgagatggagtcgtatgt 101  Q
    ||||||||| |||||  |||||||||||||||||||| ||||||||| |||| ||||||||||| |||| ||||| |||||||| | || ||||||| ||    
T  14 aagtgaaaatatgttatgttgaatgacttgatgtattggtatgattgtcattgattatacatttctctggtgttgaattggttgcggtgaagtcgtaggt 113  T
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcct 201  Q
    |||||    | ||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  114 catattttgatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgcct 213  T
Q  202 tgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||| ||||    
T  214 tgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgacagcggtgtgg 313  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |  |||| |||| || ||||||||||||||||| ||||| |||||| ||||||||||||| | ||||| |||||| ||||||| ||| |||||| |||||    
T  314 gctacggtcctg-aacatggtaccacatgcataattgcatttgtcgaggagtcttagagg-ggtgtcatgtcattacatgagttgttattgttgattgaa 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 119)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 395
Target Start/End: Original strand, 20328094 - 20328487
Alignment:
Q  3 aagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattttct--gatgttggattggttgagatggagtcgtatg 100  Q
    ||||||||| |||||  |||||| ||||||||||||||||||||||| |||| ||||||||||||||  | ||||| |||||||| | || ||||||| |    
T  20328094 aagtgaaaatatgttatgttgaacgacttgatgtattagtatgattgtcattgattatacattttctctggtgttgaattggttgcggtgaagtcgtagg 20328193  T
Q  101 tcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcc 200  Q
    ||||||  ||| ||| |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||| |||||    
T  20328194 tcatatttatatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataatcataaaagtgggagagcttcggctctgggacgcc 20328293  T
Q  201 ttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtg 300  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||| |||    
T  20328294 ttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgacagcggtgtg 20328393  T
Q  301 ggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttg 395  Q
    ||  |||| ||||  ||||||||||||||||||||| ||| |||||| || |||||||||||||||||| |||||| ||||| | | ||||||||    
T  20328394 ggctacggtcctg-tatatggtaccacatgcatagtagcatttgtcgaggggtcttagaggtgttgtcatgtcattacatgaattgctgttgttg 20328487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 3 - 402
Target Start/End: Original strand, 11390173 - 11390571
Alignment:
Q  3 aagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattt-tctgatgttggattggttgagatggagtcgtatgt 101  Q
    ||||||||| |||||  ||||||||||||| |||||| | ||||||| |||||||||||||||| |||| |||||||||||||| |||| ||||||| ||    
T  11390173 aagtgaaaatatgttatgttgaatgacttgttgtattggaatgattgtcattaattatacatttctctggtgttggattggttgcgatgaagtcgtaggt 11390272  T
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcct 201  Q
    |||||  ||| ||| |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | ||||||||    
T  11390273 catatttatatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataatcataaaagtgggagagcttcggctctagaacgcct 11390372  T
Q  202 tgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||  | |||||||||||||||||||||||| ||||    
T  11390373 tgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagtggtgaggacttatgtcctgaaaagaatgctttaaccattcgacagcggagtgg 11390472  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |  |||| |||| || ||||||||||||||||||||||| |||||| |||||||||| || | ||||| |||||| ||||||| ||| |||| | |||||    
T  11390473 gctacggtcctg-aacatggtaccacatgcatagttgcatttgtcgaggagtcttagtgg-ggtgtcatgtcattacatgagttgttattgtggattgaa 11390570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 393
Target Start/End: Original strand, 11383685 - 11384074
Alignment:
Q  3 aagtgaaaagatgttgcgttgaatgacttgatgtattagtatgattgacattaattatacattt-tctgatgttggattggttgagatggagtcgtatgt 101  Q
    ||||||||| |||||  ||||||||||||| |||||| | ||||||| |||||||||||||||| |||| |||||||||||||| | || ||||||| ||    
T  11383685 aagtgaaaatatgttatgttgaatgacttgttgtattggaatgattgtcattaattatacatttctctggtgttggattggttgcggtgaagtcgtaggt 11383784  T
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcct 201  Q
    |||||  ||| ||| |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||    
T  11383785 catatttatatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataatcataaaagtgggagagcttcggctctggaacgcct 11383884  T
Q  202 tgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgg 301  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||  | |||||||||||||||||||||||| ||||    
T  11383885 tgttgttcaaagcggtggaacactagtggttcaaagcggtgtttagcggtgaggacttaagtcctgaaaagaatgctttaaccattcgacagcggagtgg 11383984  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |  |||| |||| || ||||||||||||||||||||||| |||||| |||||||||| || | ||||| |||||| ||||||| ||| ||||    
T  11383985 gctacggtcctg-aacatggtaccacatgcatagttgcatttgtcgaggagtcttagtgg-ggtgtcatgtcattacatgagttgttattgt 11384074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 126 - 402
Target Start/End: Complemental strand, 16676398 - 16676124
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16676398 gagttgtatgtagatatacataagtgggttggttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 16676299  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||  |||||||||||    
T  16676298 agttgttcaaagcggtgtcgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggtcct-taatatggtacc 16676200  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||| |||||| ||||||    
T  16676199 acatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgttattgttgattgaat 16676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 103 - 411
Target Start/End: Original strand, 21231981 - 21232288
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| |||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  21231981 atatatatatatatgcattagttgagttgtatgtagatatatacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgcctt 21232080  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgg 301  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||   ||||| | ||    
T  21232081 gtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattcattagcgg-gagg 21232179  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |   |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||| |||||||||||||||||||| |||    
T  21232180 gcttcggccctg-aatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatggcattacatgagtcgttgttgttggtcgaa 21232278  T
Q  402 tcgttatatt 411  Q
    | ||||||||    
T  21232279 ttgttatatt 21232288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 126 - 402
Target Start/End: Complemental strand, 17650634 - 17650361
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  17650634 gagttgtatgtagatatacataagtgggttggttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaa-gcggtggaacact 17650536  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  17650535 agttgttcaaagcggtgtcgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggtcct-aaatatggtacc 17650437  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||| |||||| ||||||    
T  17650436 acatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgttattgttgattgaat 17650361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 126 - 398
Target Start/End: Complemental strand, 18607072 - 18606801
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||||    
T  18607072 gagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgagagagcttcgactctggaacgccttgtggttcaaagcggtggaacact 18606973  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||  | |||||||||||||||||||||||| |||||  |||| |||| || ||||||||    
T  18606972 agtggttcaaagcggtgtttagcggtgaggacttatgttctgaaaagaatgctttaaccattcgacagcggtgtgggctacggtcctg-aacatggtacc 18606874  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    ||||||||| ||||| |||| | ||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  18606873 acatgcataattgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgtcgttggtt 18606801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 13006513 - 13006299
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13006513 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 13006414  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  13006413 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagtggtgtgggtcatggccctgaattatggtacc 13006314  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  13006313 acatgcatagttgca 13006299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 14421561 - 14421347
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||| |||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||    
T  14421561 gagttgtatatagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacgct 14421462  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  14421461 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggtacc 14421362  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  14421361 acatgcatagttgca 14421347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 13123937 - 13124155
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| |||||| ||| || ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  13123937 tagttgagttgtatgtagatatacacaggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgccttgtcgttcaaagcggtgga 13124035  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  13124036 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctggattatg 13124135  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  13124136 gtaccacatgcatatttgca 13124155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 4280178 - 4279956
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  4280178 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 4280080  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  4280079 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 4279981  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  4279980 ttatggtaccacatgcatatttgca 4279956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 121 - 385
Target Start/End: Complemental strand, 11303062 - 11302801
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  11303062 tagttgagttgtatgtagatatacacaggtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 11302963  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
      |||||||| |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||| | | ||    
T  11302962 gtactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacaaaggtgtgggtcacggccctg-attttg 11302865  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||| ||| ||| |||||||||||    
T  11302864 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttttcatgtc-ttgcatgagtc 11302801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 19616510 - 19616288
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  19616510 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 19616412  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  19616411 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 19616313  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  19616312 ttatggtaccacatgcatatttgca 19616288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 129 - 385
Target Start/End: Original strand, 23665802 - 23666055
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  23665802 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 23665901  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    || |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| | | ||||||||||    
T  23665902 tgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtgtgggtcacggccctg-attttggtaccaca 23665999  T
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  23666000 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 23666055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 100 - 340
Target Start/End: Original strand, 12591580 - 12591819
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| ||||||| | | |||| |||||||||||||||||||||  || || |||| |||||| ||| || ||||||||||||||||| ||||||||    
T  12591580 gtcatataaatacatatgtaatagtagagttgtatgtagatatacactggttgggtagttgcataatcatcaa-gtgggagagcttcggctctggaacgc 12591678  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgt 299  Q
     | || ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||    
T  12591679 ttcgtcgttcaaagcggtggagcactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagcggtgt 12591778  T
Q  300 gggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  12591779 gggtcacggccctgaattatggtaccacatgcatatttgca 12591819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 12710866 - 12711084
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| ||||||  || || |||||||||||||| || ||||||||||||| |||||||||||||||    
T  12710866 tagttgagttgtatgtagatatacacaggttgggtagttgcataaatatcaa-gtgggagagcttcgactctggaacgccttgtcgttcaaagcggtgga 12710964  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  12710965 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctggattatg 12711064  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  12711065 gtaccacatgcatatttgca 12711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 129 - 385
Target Start/End: Complemental strand, 29795932 - 29795679
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  29795932 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 29795833  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    || |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||   | ||||||||||    
T  29795832 tgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtatgggtcacggccctg-gttttggtaccaca 29795735  T
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  29795734 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 29795679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 129 - 385
Target Start/End: Complemental strand, 29799751 - 29799498
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  29799751 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 29799652  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    || |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||   | ||||||||||    
T  29799651 tgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtatgggtcacggccctg-gttttggtaccaca 29799554  T
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  29799553 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 29799498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 121 - 340
Target Start/End: Complemental strand, 13742716 - 13742498
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| ||||||||||| |||||||||| || || |||| |||||| ||| || ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  13742716 tagtcgagttgtatgttgatatacacaggttgggtagttgcataaacatcaa-gtgggagagtttcggctctggaacgccttgtcgttcaaagcggtgga 13742618  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||| |||||||| || ||||    
T  13742617 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtaacggccctaaattatg 13742518  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  13742517 gtaccacatgcataattgca 13742498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 89 - 333
Target Start/End: Complemental strand, 6412065 - 6411821
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcgg 188  Q
    |||||| ||| |||||||||||| ||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  6412065 tggagtggtaagtcatatacatatatatgcattggttgagttgtatgtagatatacacaagagggttagttgcataagcataaaagcgggagagcttcgg 6411966  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccatt 287  Q
    || |||||||| |||| ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||  || ||||||||||| |||    
T  6411965 ctctggaacgcattgtcgttcaaagcggtggaacactagttgttcaaagcagtgtatagcggtgaggacttatgtcctgaaaatgaatgctttaacaatt 6411866  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    | ||||||| | |||   |||||||| | |||||||||||||||||    
T  6411865 ctacagcggtgagggcttcggccctg-attatggtaccacatgcat 6411821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 14281589 - 14281822
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||    
T  14281589 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaatgc 14281688  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || ||||| ||||||||||||||  || |||||||||||||||| ||||||| |    
T  14281689 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtttagtggtgatgacttatgtcctgaaaatgaatgctttaaccattctacagcggtg 14281788  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     |||  ||||||||| | |||||||||||||||||    
T  14281789 agggctacggccctg-attatggtaccacatgcat 14281822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 124 - 288
Target Start/End: Original strand, 11220079 - 11220245
Alignment:
Q  124 tggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  11220079 tggagttgtatgtagatatacaccagtggagttagttgcagaagcataaaagtgggagggcttcggccctggaacgccttgtcgttcaaagcggtggaac 11220178  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  11220179 actagttgttcaaagcggtgttaagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 11220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 35962709 - 35962914
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  35962709 gttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 35962808  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  35962809 ttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtacca 35962907  T
Q  327 catgcat 333  Q
    |||||||    
T  35962908 catgcat 35962914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 15339030 - 15338826
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  15339030 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 15338931  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  15338930 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtacca 15338833  T
Q  327 catgcat 333  Q
    |||||||    
T  15338832 catgcat 15338826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 15723188 - 15723392
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  15723188 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 15723287  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  15723288 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtacca 15723385  T
Q  327 catgcat 333  Q
    |||||||    
T  15723386 catgcat 15723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 126 - 333
Target Start/End: Complemental strand, 1612830 - 1612623
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  1612830 gagttgtatgtagatatacacaagtggagtcagttggataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggaacac 1612731  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    || ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | |||||||    
T  1612730 tatttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgggggctacggtcctg-attatggta 1612633  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  1612632 ccacatgcat 1612623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 128 - 331
Target Start/End: Complemental strand, 19600046 - 19599844
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  19600046 gttgtatgtagatatacacaagtgggtcagttgtataagcataatagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggatcactag 19599947  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  19599946 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaataaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 19599849  T
Q  327 catgc 331  Q
    |||||    
T  19599848 catgc 19599844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 23201479 - 23201679
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||| ||||||| |||| || ||||| |||||| |||||||||| ||||||||||||| ||||| || | || |||||||| ||||||  |||||||     
T  23201479 gtatgtggatatactcaaggggattagttgcataaacataaaagtgagagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtta 23201578  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  23201579 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 23201676  T
Q  331 cat 333  Q
    |||    
T  23201677 cat 23201679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 23507606 - 23507806
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||| ||||||| |||| || ||||| |||||| |||||||||| ||||||||||||| ||||| || | || |||||||| ||||||  |||||||     
T  23507606 gtatgtggatatactcaaggggattagttgcataaacataaaagtgagagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtta 23507705  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  23507706 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 23507803  T
Q  331 cat 333  Q
    |||    
T  23507804 cat 23507806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 15710964 - 15711168
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| | ||||||||||||| |||||||| ||||||  |||||    
T  15710964 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggatctggaacgccttgtcgttcaaagtggtggagtactag 15711063  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||| ||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  15711064 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgatttaaccattctacagcggtgagggctacggtcctg-attttggtacca 15711161  T
Q  327 catgcat 333  Q
    |||||||    
T  15711162 catgcat 15711168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 16109044 - 16109243
Alignment:
Q  132 tatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgt 231  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||| |||||||||     
T  16109044 tatgtagat-tacacaggtgggtcagttgcataagcataaaagtgggagagtttcggctctggaacgccttgtcgttcaaagtggtggagcactagttgc 16109142  T
Q  232 tcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
    |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||||||    
T  16109143 tcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtaccacatg 16109240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 14432192 - 14431989
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||| || ||||||||||||| |||||||| |||||| |||||||    
T  14432192 ttgtatgtagatatactcaagtgggtcagttgcataagcataacagtgggagagcttcgactctggaacgccttgtcgttcaaagtggtggagcactagt 14432093  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    || |||||| |||||| || |||||||||||| |||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | |||||||||    
T  14432092 tgctcaaagtggtgtt-agtggtgaggacttaggtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtaccac 14431995  T
Q  328 atgcat 333  Q
    ||||||    
T  14431994 atgcat 14431989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 806973 - 807174
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  806973 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 807072  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  807073 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 807170  T
Q  330 gcat 333  Q
    ||||    
T  807171 gcat 807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 11631940 - 11632117
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  11631940 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 11632037  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  11632038 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 11632117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 18049230 - 18049407
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  18049230 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagaggtggagtactagttactcaaagtggtgt--agtggtga 18049327  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  18049328 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 18049407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 18055709 - 18055886
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  18055709 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 18055806  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  18055807 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 18055886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 20579941 - 20580118
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  20579941 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 20580038  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  20580039 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttatggtaccacatgcat 20580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 147277 - 147016
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  || |||  | ||||   ||||||||||||| ||||||||||||||||||    
T  147277 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaaca 147178  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    ||| |||||||||||||||||| | ||||||||||| ||||||||||    | |||||||||||||||| | | ||| | |||   |||| |||  ||||    
T  147177 ctatgttgttcaaagcggtgtt-aacggtgaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggcttcggctctg--atat 147081  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  147080 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 147016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 333
Target Start/End: Original strand, 3289749 - 3289956
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| ||   |||  ||||||||||||| |||||||||||| ||||||    
T  3289749 gagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggccctggaacgccttgtcgttcaaagcggtagaacac 3289848  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||| | |||||||||||||||||||||| |||  |||||||||||||||| |  ||||||| |||   |||| ||| ||||||||    
T  3289849 ttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaatg--aatgctttaaccattcaattagcggcgagggcttcggctctg-aatatggt 3289945  T
Q  323 accacatgcat 333  Q
    |||||||||||    
T  3289946 accacatgcat 3289956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 129 - 260
Target Start/End: Complemental strand, 14128374 - 14128244
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||| || ||||||||||||| |||||||| |||||| |||||||    
T  14128374 ttgtatgtagatatactcaagtgggtcagttgcataagcataacagtgggagagcttcgactctggaacgccttgtcgttcaaagtggtggagcactagt 14128275  T
Q  229 tgttcaaagcggtgttgagcggtgaggactta 260  Q
    || |||||| |||||| || ||||||||||||    
T  14128274 tgctcaaagtggtgtt-agtggtgaggactta 14128244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 385
Target Start/End: Complemental strand, 31154600 - 31154316
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    ||||||||  |||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||| |||  || |||  | ||||   ||||||    
T  31154600 gtcatataagtacatatgcatt-gtcgagttgtatgtagatatacacaagtggagttagtcgcataa-catgaaaacggtgaggacctcggtcctggaac 31154503  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatg---ataatgctttaaccattcgacag 293  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| | |  ||  |||||| ||||||||||    | |||||||||||||||| | |     
T  31154502 gccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgataatggg--aggactcatgtcctgatataaagaatgctttaaccattctataa 31154405  T
Q  294 cggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||| | ||| | |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||| || |||| |||| ||||||||||    
T  31154404 cggtgagggcctcggccctga--tatggtaccacatgcatagttgcatttgtcgaggagtcttagaggagtcgtcatgtca-tgcatgagtc 31154316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 36306032 - 36306121
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  36306032 ttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgtgagagcttcggctctggaacgccttgtcgttcaaagcggtg 36306121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 14320533 - 14320778
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  || |||  | ||||   ||||||||||||| |||||||||| |||||||    
T  14320533 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacggtgaggacctcggtcctggaacgccttgtcgttcaaagcgatggaaca 14320632  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatg---ataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    ||| |||||||||||||||||| |   | ||||||| |||||||||||   | |||||||||||||||| | | ||| | |||   ||||||||  ||||    
T  14320633 ctatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgatgaaaagaatgctttaaccattctataacggtgagggctccggccctg--atat 14320728  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||||||||||| |||| | |||||||||| || |||||||    
T  14320729 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 14320778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 18958367 - 18958484
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||||||||| ||  |||||||    
T  18958367 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagagcttctgccctggaacg 18958466  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  18958467 ccttgtcgttcaaagcgg 18958484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 19145591 - 19145498
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  19145591 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 19145498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 20744990 - 20744897
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  20744990 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 20744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 358
Target Start/End: Complemental strand, 14565917 - 14565683
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||||||||||||||||||  | || ||||||||||||||  || |||  | ||||   ||||||||||||| |||||||||||||||||||    
T  14565917 gagttgtatgtagatatacacaagtggagtcgttgcataagcataaaaacggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacac 14565818  T
Q  225 ta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat----gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    || |||||||||||||||||| |   | ||||||| ||||||||||     | |||||||||||||||| | | ||| | |||   |||| |||  ||||    
T  14565817 tatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaaagaatgctttaaccattctataacggtgagggcttcggctctg--atat 14565722  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||||| |||| | ||||||||||    
T  14565721 ggtaccacatgcatagttgcatttgttgaggagtcttag 14565683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 13678308 - 13678217
Alignment:
Q  306 cggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||| |||||||||||||||||||||||| |||| | ||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  13678308 cggccctgaa-tatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgtcgttggtt 13678217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 18872075 - 18871815
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  18872075 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 18871976  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  18871975 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 18871879  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  18871878 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 18871815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 37244273 - 37244363
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  ||||||||||||| |||||||||||    
T  37244273 gagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctggaacgccttgtcgttcaaagcgg 37244363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 15085861 - 15085978
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || |||| |||| ||||||||| ||||| ||||| ||  |||||||    
T  15085861 gtcatatacatatatatgcatttgatcgagttgtatgtagatatacacaagtgagtcagtcccatatgcataaaagcgggagggcttctgccctggaacg 15085960  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  15085961 ccttgtcgttcaaagcgg 15085978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 26289706 - 26289823
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  |||||||    
T  26289706 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgccctggaacg 26289805  T
Q  199 ccttgttgttcaaagcgg 216  Q
    ||||||  ||||||||||    
T  26289806 ccttgtcattcaaagcgg 26289823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 392
Target Start/End: Original strand, 14266155 - 14266239
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||||||    
T  14266155 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 14266239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 15166984 - 15166723
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagag--cttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||   |  |||  ||||||   |||||||| |||| ||||||| || ||||||    
T  15166984 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaac 15166885  T
Q  223 acta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    |||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  |||    
T  15166884 actatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tat 15166788  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  15166787 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 15166723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 14178947 - 14179065
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||  |||  ||||||    
T  14178947 gtcatatacatatatatgcatttgtcgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctctggccctggaac 14179046  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  14179047 gccttgtcgttcaaagcgg 14179065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 20907328 - 20907573
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   ||||||||||||| ||||||| || |||||||    
T  20907328 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgccttgtcgttcaaaacgatggaaca 20907427  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   || | ||||  ||||    
T  20907428 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcgactctga--tatg 20907524  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  20907525 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 20907573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 19151893 - 19151800
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||| || |||||||||||||||||||  || ||||   |||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  19151893 gccctgtaaaatggtaccacatgcatagtcacatttgttaaggagtcttagtggtgttgtcgtgtcattgcatgagtcgttgttgttggttgaa 19151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 20751292 - 20751199
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||| || |||||||||||||||||||  || ||||   |||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  20751292 gccctgtaaaatggtaccacatgcatagtcacatttgttaaggagtcttagtggtgttgtcgtgtcattgcatgagtcgttgttgttggttgaa 20751199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 3858324 - 3858583
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  3858324 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 3858423  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat-gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||  | |||||||||||||||| | | ||  | | |   |||| |||  ||||||    
T  3858424 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaagaatgctttaaccattctataacgatgagagcttcggctctg--atatgg 3858520  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  3858521 taccacatgcataattgcatttgttgaggagtcttagaagagttgtcatgtc-ttgcatgagtc 3858583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 392
Target Start/End: Original strand, 14255879 - 14255963
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| || |||||||||||||||||||    
T  14255879 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgttattgcatgagtcgttgttg 14255963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 16952175 - 16952290
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| | ||| |||||  |  |||||||    
T  16952175 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgagagggcttctaccctggaacg 16952274  T
Q  199 ccttgttgttcaaagc 214  Q
    |||||| |||||||||    
T  16952275 ccttgtcgttcaaagc 16952290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 2966140 - 2965895
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  2966140 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 2966041  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  2966040 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 2965944  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  2965943 gtaccacatgcatagttgcatttgttgaggagtcttagtggggttgtca 2965895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 832950 - 833043
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| ||   ||| |||||||||||||| |||||||||||||    
T  832950 gagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggccttggaacgccttgtcgttcaaagcggtg 833043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 1198130 - 1198223
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| ||   ||| |||||||||||||| |||||||||||||    
T  1198130 gagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggccttggaacgccttgtcgttcaaagcggtg 1198223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 16187655 - 16187810
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| ||  ||||||| |||||||||||||||||| || ||| ||||||||| ||||| ||||| ||       
T  16187655 atggagtcgtaagtcatatatacatatatgcatt-gtcaagttgtacgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggccct 16187753  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacact-agttgttcaaagcggtg 242  Q
    |||  |||||||||| || ||||||||||||||||||||  ||||||||||| ||||    
T  16187754 ggccctggaacgcctcgtcgttcaaagcggtggaacactctgttgttcaaagtggtg 16187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 46624855 - 46624783
Alignment:
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||||||||||| ||| |||| | ||||||||||||||||||| | ||||||||||||||||| ||||    
T  46624855 ggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtgatgtcattgcatgagtcgtcgttg 46624783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 3328038 - 3327920
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagt-gggttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||| | || ||| ||||||||||||||| |||||  |||  ||  ||||||    
T  3328038 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtagagtcagttgcataagcataaaagcgggaggacttttgccctggaac 3327939  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  3327938 gccttgtcgttcaaagcgg 3327920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 16008293 - 16008048
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||||||||||| |||||||| || ||| ||||||||||||||  |  |||  ||||||   ||||||||||||| ||||||| || |||| ||    
T  16008293 gagttgtatgtagatatatacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgccttgtcgttcaaaacgatggagca 16008194  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  16008193 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 16008097  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||| |||||| |||| | |||||||||| || |||||||    
T  16008096 gtaccacatgcatggttgcatttgttgaggagtcttagtggagttgtca 16008048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 836993 - 837082
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagc 214  Q
    ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| ||   |||| ||||||||||||| |||||||||    
T  836993 gagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggctctggaacgccttgtcgttcaaagc 837082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 1202173 - 1202262
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagc 214  Q
    ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| ||   |||| ||||||||||||| |||||||||    
T  1202173 gagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggctctggaacgccttgtcgttcaaagc 1202262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 2464521 - 2464262
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  2464521 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 2464422  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | | |||||||||| || |||| | || |||||||| |||||||||| |  |||||||||||||||| | | ||  | | |   || | ||||  |||||    
T  2464421 cgatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaagaatgctttaaccattctataacgatgagagcttcgactctga--tatgg 2464325  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  2464324 taccacatgcataattgcatttgttgaggagtcttagaagagttgtcatgtc-ttgcatgagtc 2464262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 14945836 - 14945928
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||||||||||||| ||| |||||| |||| |||| ||||| ||||   |  ||||||||||||| |||||||||||||    
T  14945836 agttgtatgtagatatacacaagtgggtcagttgcataaacatataaagcgggagggctttttccctggaacgccttgtcgttcaaagcggtg 14945928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 15373429 - 15373521
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||||||||||||| ||| |||||| |||| |||| ||||| ||||   |  ||||||||||||| |||||||||||||    
T  15373429 agttgtatgtagatatacacaagtgggtcagttgcataaacatataaagcgggagggctttttccctggaacgccttgtcgttcaaagcggtg 15373521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 21231847 - 21231910
Alignment:
Q  28 acttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatg 90  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||| ||||    
T  21231847 acttgatgtattagtatgattgttattaattatacatttttctgatgttggactggttgtgatg 21231910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 41783304 - 41783354
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||||| |||||||    
T  41783304 gagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgatggttga 41783354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 14169473 - 14169525
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  14169473 gtcatatacatatatatgcatttgtcgagttgtatgtagatatacacaagtgg 14169525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 15086013 - 15086105
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||||||||  ||||||||||||||||  ||||||| | |||   | |||||| |||||||||||||||||||| |||||    
T  15086013 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaacagcggtgagggcttcagccctg-aatatggtaccacatgcatatttgca 15086105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 3327885 - 3327778
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||||||||  ||||||||||||||||  | ||||| | |||    ||||||| |||||||||||||||||||| ||||| |||    
T  3327885 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaaagcggtgagggctttggccctg-aatatggtaccacatgcatatttgcatttg 3327789  T
Q  345 tcggggagtct 355  Q
    | | |||||||    
T  3327788 ttgaggagtct 3327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 32771580 - 32771473
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||| |||||| ||||||||  ||||||||||||||| | |||||| | |||   |||||||||| |||||||||||||||||| ||||| |||    
T  32771580 agcggtgagggcttatgccctgatga--atgctttaaccattcaaacagcggtgagggcttcggccctgaa-tatggtaccacatgcatatttgcatttg 32771484  T
Q  345 tcggggagtct 355  Q
    | | |||||||    
T  32771483 ttgaggagtct 32771473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 46682157 - 46682248
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  46682157 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 46682248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 12547408 - 12547358
Alignment:
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  12547408 catatacatatatatgcatttgttgagttgtatgtagatatacacaagtgg 12547358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 36306109 - 36306171
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgac 291  Q
    ||||||||||||||| ||||||||||||| |||||||| |  | |||||||||||||||||||    
T  36306109 gttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcgac 36306171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 45185442 - 45185384
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  45185442 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 45185384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 11312293 - 11312224
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||| |||||| |||||||| | |||||||||| | ||||||||||||| |||||| || ||||||    
T  11312293 tagttgcatttgtcgaggagtcttggtggtgttgtcatgccattgcatgagtcattgttggtgattgaat 11312224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 12694564 - 12694515
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||| |||||||||| ||  ||||||||||||||||||||||||    
T  12694564 ggagtcttagcggtgttgtcaagtagttgcatgagtcgttgttgttggtt 12694515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 13678575 - 13678447
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtg-ggttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| || ||||||||||||||||||| ||||||  || |||  |||||||||||||| ||||| |||      
T  13678575 atggagtcgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacgcaagtgaagtcagttacataagcataaaagagggagggctct 13678477  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
    |||  |||||||||| ||  ||||||||||    
T  13678476 ggccctggaacgcctcgtcattcaaagcgg 13678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 16090037 - 16089996
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  16090037 tatggtaccacatgcatagttgcaattgttgaggagtcttag 16089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 29182212 - 29182253
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  29182212 tatggtaccacatgcatagttgcaattgttgaggagtcttag 29182253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 12202268 - 12202308
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  12202268 gtgttgtcatgtcattgcataagtcgttgttgttggttgaa 12202308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 15689806 - 15689766
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  15689806 gtgttgtcatgtcattgcataagtcgttgttgttggttgaa 15689766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 15697399 - 15697359
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  15697399 gtgttgtcatgtcattgcataagtcgttgttgttggttgaa 15697359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 15704379 - 15704339
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  15704379 gtgttgtcatgtcattgcataagtcgttgttgttggttgaa 15704339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 16575613 - 16575673
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||| ||| |||| | |||||| ||| |||||||||| ||||||||||||||||||||||    
T  16575613 atagtcgcatttgttgaggagtcatagtggtgttgtcatgtcattgcatgagtcgttgttg 16575673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 16590049 - 16589989
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||| ||| |||| | |||||| ||| |||||||||| ||||||||||||||||||||||    
T  16590049 atagtcgcatttgttgaggagtcatagtggtgttgtcatgtcattgcatgagtcgttgttg 16589989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 37244400 - 37244491
Alignment:
Q  248 cggtgaggacttatgtcctgatgataatgctttaaccattc--gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||||||  ||||||||||||||||   ||||||| | |||   |||||||| | |||||||||||||||||| |||||    
T  37244400 cggtgaggacttatgtcctgatg--aatgctttaaccattcaaaacagcggtgagggcttcggccctg-attatggtaccacatgcatatttgca 37244491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 400
Target Start/End: Original strand, 12208882 - 12208921
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  12208882 gtgttgtcatgtcattgcataagtcgttgttgttggttga 12208921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 14348560 - 14348509
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || |||||||  ||||||||||||||||||||||||||||||    
T  14348560 gagtcgtagtggggttgtcatatcattgcatgagtcgttgttgttggttgaa 14348509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 14945916 - 14945975
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||||||||| | ||||||||||||||||||||||   || ||||||||||||||||    
T  14945916 gttcaaagcggtgattagcggtgaggacttatgtcctgtaaatgaatgctttaaccattc 14945975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 15104307 - 15104398
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||  ||   ||  ||||||||||||| |||||||||||    
T  15104307 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggaggactcttgccctggaacgccttgtcgttcaaagcgg 15104398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 15373509 - 15373568
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||||||||| | ||||||||||||||||||||||   || ||||||||||||||||    
T  15373509 gttcaaagcggtgattagcggtgaggacttatgtcctgtaaatgaatgctttaaccattc 15373568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 16668748 - 16668799
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || |||||||  ||||||||||||||||||||||||||||||    
T  16668748 gagtcgtagtggagttgtcatatcattgcatgagtcgttgttgttggttgaa 16668799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 23442233 - 23442194
Alignment:
Q  353 tcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  23442233 tcttagtggtgttgtcatgtcattgcatgagtcgttgttg 23442194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 12547156 - 12547098
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||| ||||||||||||||    
T  12547156 attgtcgaggagtcttagcggtgttgtcgagtggttgcatgagttgttgttgttggttg 12547098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 16476334 - 16476384
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||| |||||||||| ||  |||||||||||||| ||||||||||    
T  16476334 ggagtcttagcggtgttgtcaagtagttgcatgagtcgttcttgttggttg 16476384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 42041288 - 42041238
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    |||||||||  ||||||||| |||||||||||||||||||| | |||||||    
T  42041288 gagtcttagcagtgttgtcatgtcattgcatgagtcgttgtcgatggttga 42041238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 46348719 - 46348773
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggag 180  Q
    ||||||| |||||||||||||||||| || ||| ||||||||||||||| |||||    
T  46348719 agttgtacgtagatatacacaagtggagtcagttgcataagcataaaagcgggag 46348773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 10897152 - 10897265
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  10897152 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 10897251  T
Q  224 cta-gttgttcaaa 236  Q
    ||| ||||||||||    
T  10897252 ctatgttgttcaaa 10897265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 11308985 - 11308928
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    |||||||| |||||| |||||||| | |||||||||| | ||||||||||||| ||||    
T  11308985 tagttgcatttgtcgaggagtcttggtggtgttgtcatgccattgcatgagtcattgt 11308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 15142414 - 15142385
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||||||||||||||||||||||||||    
T  15142414 gtggagttgtatgtagatatacacaagtgg 15142385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 17643131 - 17643168
Alignment:
Q  363 gttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  17643131 gttgtcatgtcattgcatgagttgttgttgttggttga 17643168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 26289860 - 26289898
Alignment:
Q  248 cggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  26289860 cggtgaggacttatgtcctgatg--aatgctttaaccattc 26289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 46625059 - 46625014
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||    
T  46625059 gagttgtatgtagatatacacaagtggagtcagttgcataagcata 46625014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 11857669 - 11857713
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  11857669 agttgtatgtagatatacacaagtggagtcagttgcataagcata 11857713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 14581412 - 14581440
Alignment:
Q  124 tggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||||||||||||||||||||||    
T  14581412 tggagttgtatgtagatatacacaagtgg 14581440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 15104506 - 15104585
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||| || | | |||||| |||||||||| |||||||||   |  ||||||||||| |||||||||||||    
T  15104506 tggtaccacatgcattgtcgta-ttgtcgaggagtcttagcggtgttgtcgaatagttgcatgagtcattgttgttggttg 15104585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 16090238 - 16090190
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  16090238 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaa 16090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 21519484 - 21519524
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| |||||| |||||||||||||    
T  21519484 gtgttgtcatgtcattgcataagtcgtcgttgttggttgaa 21519524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #118
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 29182011 - 29182059
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  29182011 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaa 29182059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 151
Target Start/End: Original strand, 41783042 - 41783070
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtg 151  Q
    |||||||||||||||||||||||||||||    
T  41783042 gtggagttgtatgtagatatacacaagtg 41783070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 88 - 395
Target Start/End: Original strand, 4551 - 4856
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| ||| ||||||||   | ||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4551 atggagttgtaagtcatatatgcaaatatgcattagttgagttgtatgtagatatacataagtgggttagttgcataagcataaaagtgggagagcttcg 4650  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  4651 gctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaacaatt 4750  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||    
T  4751 cgacagcggtgtgggtcacggccctg-aatatggtaccacatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgt 4848  T
Q  388 tgttgttg 395  Q
    ||||||||    
T  4849 tgttgttg 4856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 23767 - 23975
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||||||||||     
T  23767 agttgtatgcagatatacacaagtgggtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcggtggaacact 23866  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | |||||||||||||||| | |||||||||||| ||||||||||    |||||||||||||||| |  ||||| | |||   |||||||| |||||||||    
T  23867 ttgttgttcaaagcggtgattagcggtgaggacctatgtcctgaaatgaatgctttaaccattctattagcggtgagggctccggccctg-aatatggta 23965  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  23966 ccacatgcat 23975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 18136 - 18344
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||||||||||     
T  18136 agttgtatatagatatacacaagtgggtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcggtggaacact 18235  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | |||||||||||||||| | |||||||||||| ||||||||||    ||||||||| |||||| |  ||||| | |||   |||||||| |||||||||    
T  18236 ttgttgttcaaagcggtgattagcggtgaggacctatgtcctgaaatgaatgctttagccattctattagcggtgagggctccggccctg-aatatggta 18334  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  18335 ccacatgcat 18344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 88 - 402
Target Start/End: Original strand, 4232 - 4544
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||||||| |||||||| | | ||| |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4232 atggagtcgtaagtcatatatacaaatatgcattagttgagttgtatgtagatatacacaagtggattagttgcataagcataaaagtgggagagcttcg 4331  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4332 gctctggaacgccttgtcgttcaaagcggtggaacactaattgttcacagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccatt 4431  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||||| || ||| ||||||||||||| | ||||| |||||| | ||||| ||    
T  4432 cgacagcggtgtgggtcacggccctg-aatatggtaccgcatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacttgagttgt 4529  T
Q  388 tgttgttggttgaat 402  Q
    |||||||| ||||||    
T  4530 tgttgttgattgaat 4544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 126 - 398
Target Start/End: Complemental strand, 18212344 - 18212074
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18212344 gagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 18212245  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  18212244 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-aatatggtacc 18212146  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    ||||||||||||||| |||| | ||||||||||| || | |||| ||| |||||||||||||||| |||||||    
T  18212145 acatgcatagttgcatttgt-gaggagtcttagatgtatcgtcatgtctttgcatgagtcgttgtcgttggtt 18212074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 100 - 402
Target Start/End: Complemental strand, 15407144 - 15406843
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| ||||||| |||||  ||||||||||||||||||||||||||||||| ||| |||||| ||| |||| | ||||||||||||| ||||||||    
T  15407144 gtcatataaatacatatgcattgttggagttgtatgtagatatacacaagtgggtcagttgcataaacatgaaagcgagagagcttcggctctggaacgc 15407045  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||   ||||| |    
T  15407044 ctcgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattcattagcgg-g 15406946  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
     |||   |||||||| ||||||||||||||||||||| |||| |||||  ||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  15406945 agggcttcggccctg-aatatggtaccacatgcatagctgcatttgtcaaggagtcttagaggtgttgtcatgtcattacatgagttgttgttgttggtt 15406847  T
Q  399 gaat 402  Q
    ||||    
T  15406846 gaat 15406843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 100 - 384
Target Start/End: Complemental strand, 11847285 - 11847003
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| |||||||   | |||| |||||||||| ||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||    
T  11847285 gtcatatatatacatatataatagtcgagttgtatgaagatatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgc 11847186  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgt 299  Q
    || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||    
T  11847185 ctcgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgt 11847086  T
Q  300 gggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    ||||||||||||||   |||||||||||||||||||||||| || ||| |||||||||| || | ||||| |||||| |||||||    
T  11847085 gggtcacggccctg-tttatggtaccacatgcatagttgcatttatcgaggagtcttagtgg-ggtgtcatgtcatttcatgagt 11847003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 121 - 385
Target Start/End: Complemental strand, 15533996 - 15533735
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  15533996 tagttgagttgtatgtagatatacacaggtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 15533897  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     ||||||||| |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| | | ||    
T  15533896 gcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtgtgggtcacggccctg-attttg 15533799  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||  |||| | |||||||||| || ||||||| ||| |||||||||||    
T  15533798 gtaccacatgcatagttgcttttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 15533735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 8046863 - 8047081
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| |||||| ||| || ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  8046863 tagtcgagttgtatgtagatatacacaggttgggtagtggcataaacatcaa-gtgggagagcttcggctctggaacgccttgtcgttcaaagcggtgga 8046961  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  8046962 acactagttgttcaaagcggtgtggagcagtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatg 8047061  T
Q  321 gtaccacatgcatagttgca 340  Q
    ||||||||||||||||||||    
T  8047062 gtaccacatgcatagttgca 8047081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 100 - 411
Target Start/End: Complemental strand, 14485745 - 14485432
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||  ||||||     
T  14485745 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcgggagggcttcggccctggaaca 14485646  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcg 295  Q
    |||||| ||||||||||||||||||| | |||||||||||||||| | ||||||||||||| |||||||| |  | ||||||||||||||||||  ||||    
T  14485645 ccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgattagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcgattagcg 14485546  T
Q  296 gcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttg 395  Q
    | | |||   |||||||  |||||||||||||| ||||||| | |||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  14485545 gtgagggcttcggccct--aatatggtaccacaagcatagtcgtaattatcgaggagtcttagaggtgttgtcatgtcaatgcatgagtcgttgttgttg 14485448  T
Q  396 gttgaatcgttatatt 411  Q
    ||||||| | ||||||    
T  14485447 gttgaattgctatatt 14485432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 100 - 330
Target Start/End: Complemental strand, 14484662 - 14484432
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  14484662 gtcatatacatatatatgcataggttgggttgtatgtagatacacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgc 14484563  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || ||||||||||||||||||||  || |||| ||||||||||| ||||||| |    
T  14484562 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgttttaaccattctacagcggtg 14484463  T
Q  299 tgggtcacggccctgaaatatggtaccacatg 330  Q
     |||  |||| |||| | ||||||||||||||    
T  14484462 agggctacggtcctg-attatggtaccacatg 14484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 635739 - 635940
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||||| |||||||||||||||||| |||||||| | || |||||||| ||||||  |||||||     
T  635739 gtatgtagatatactcaaggggattagttgcataaacataacagtgggagagcttcggctctggaacgcttggtcgttcaaagtggtggagtactagtta 635838  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  635839 ctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 635937  T
Q  331 cat 333  Q
    |||    
T  635938 cat 635940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 16156867 - 16156630
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataa-aagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||| ||||||| ||| |||||| ||||| ||||||||| |||||||| ||||||||    
T  16156867 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacgagtgggtcagttgcataatcataataagtgggagggcttcggccttggaacg 16156768  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga--taatgctttaaccattcga-cagc 294  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||  |   |||||||||||||||| |  |||    
T  16156767 ccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaatgctttaaccattctattagc 16156668  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    || | |||   |||||||| |||||||||||||||||||    
T  16156667 ggtgagggctccggccctg-aatatggtaccacatgcat 16156630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 4831057 - 4831330
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||    
T  4831057 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcac 4831156  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  ||||||||| |||||||||    
T  4831157 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggccctg-aatatggta 4831255  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||    || ||||| | |||||||||| || || ||   ||  |||||||||||||||||||||||||||    
T  4831256 ccacatgcat--gcgc-attgttgaggagtcttagtggagtcgttgagtagttgcatgagtcgttgttgttggttgaa 4831330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 4834352 - 4834625
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||    
T  4834352 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcac 4834451  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  ||||||||| |||||||||    
T  4834452 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggccctg-aatatggta 4834550  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||    || ||||| | |||||||||| || || ||   ||  |||||||||||||||||||||||||||    
T  4834551 ccacatgcat--gcgc-attgttgaggagtcttagtggagtcgttgagtagttgcatgagtcgttgttgttggttgaa 4834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 23121804 - 23121599
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||| |||| || |||||||| |||||| ||||||    
T  23121804 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaatgcctcgtcgttcaaagtggtggagcactag 23121705  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | | ||||||||    
T  23121704 ttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attttggtacca 23121606  T
Q  327 catgcat 333  Q
    |||||||    
T  23121605 catgcat 23121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 100 - 338
Target Start/End: Original strand, 11171202 - 11171440
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || |||| ||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  11171202 gtcatatacatatatatgcataggttgagtggtatgtatatatacacaagtgggtcagttgcataaacataaaagtgggagagcttcggctttggaacgc 11171301  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||| | ||| |||| |||||| ||||||||| |||||| |||||| || ||||| ||||||||||||||  || |||||||||||||||| || |||| |    
T  11171302 cttatcgtttaaagtggtggagcactagttgctcaaagtggtgtttagtggtgatgacttatgtcctgaaaatgaatgctttaaccattctacggcggtg 11171401  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcatagttg 338  Q
     |||  ||| ||||| | |||||||| |||||||| ||||    
T  11171402 agggctacgaccctg-attatggtactacatgcatggttg 11171440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 15325108 - 15324919
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||| ||||||| |||||  ||||||||||||||||||||||| ||||| ||||||  |||||||||||||| ||||| ||||| ||  |||||||    
T  15325108 gtcatataaatacatatgcattgttggagttgtatgtagatatacaccagtggagttagttacataagcataaaagcgggagggcttctgccctggaacg 15325009  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||| |||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||  || ||||||||||||||||    
T  15325008 ccttgtcgttcaaagcggtggaacacttgatgttcaaagcggt-tttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 15324919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 43284868 - 43285072
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  43284868 gttgtatgtagatatacaagagtgggtcagttgcataagcataaaagtgggagagcttcggctctgggacgccttgttgttcaaagtggtggagcactag 43284967  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||| ||||||||||| |||| || | |||  |||| |||| | ||||||||||    
T  43284968 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgatttaaccattctacagaggagagggctacggtcctg-attatggtacca 43285065  T
Q  327 catgcat 333  Q
    |||||||    
T  43285066 catgcat 43285072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 100 - 296
Target Start/End: Original strand, 17000111 - 17000308
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||| |    
T  17000111 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgagagagcttcggctctggaacac 17000210  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcgg 296  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || |||||| |||||||||||||  || |||| ||||||||||  |||||||    
T  17000211 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtttagtggtgagaacttatgtcctgaaaatgaatgttttaaccattttacagcgg 17000308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 126 - 290
Target Start/End: Original strand, 26077681 - 26077847
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||||| ||||| ||||||||| || |||||||||| |||||||||||||||||||     
T  26077681 gagttgtatgtagatatacacaagtgggtcaattacataagcataaaagcgggagggcttcggctctgaaacgccttgtcgttcaaagcggtggaacact 26077780  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    | |||||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  26077781 ttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 26077847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 20940463 - 20940260
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||| |||||||    
T  20940463 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagcttcagctctggaacgccttgttgttcaaagtggtggagcactagt 20940364  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    || |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||| ||| | |||  |||| |||| | | |||||||||    
T  20940363 tgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacaacggtgagggctacggtcctg-attttggtaccac 20940266  T
Q  328 atgcat 333  Q
    ||||||    
T  20940265 atgcat 20940260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 385
Target Start/End: Complemental strand, 14910831 - 14910534
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttc 186  Q
    ||||||| || |||||||| | ||||| ||||| || || ||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| || ||    
T  14910831 tggagtcataagtcatatatacacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagggcctc 14910732  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaac 283  Q
    ||   ||||||||||||| |||||||||| |||||||||| ||||||||||||| |||| || |||||||||| ||||||| ||   | |||||||||||    
T  14910731 ggtcctggaacgccttgtcgttcaaagcgatggaacactatgttgttcaaagcgatgtt-ag-ggtgaggactcatgtccttataaaagaatgctttaac 14910634  T
Q  284 cattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgag 383  Q
    ||||| | ||||| | |||   |||||||| | |||||||||||||||||||||||| |||| | | |||||||| || ||||||| ||| |||||||||    
T  14910633 cattctatagcggtgagggctccggccctg-attatggtaccacatgcatagttgcatttgttgagtagtcttagtggagttgtcatgtc-ttgcatgag 14910536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 290
Target Start/End: Complemental strand, 14048414 - 14048242
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgg 219  Q
    |||| ||||||||||||||||||||||||||| || ||| |||||| |||||||| ||||| |||| |||  ||||||||||||| ||||||||||||||    
T  14048414 tagttgagttgtatgtagatatacacaagtggagtcagttgcataatcataaaagcgggagggctttggccctggaacgccttgtcgttcaaagcggtgg 14048315  T
Q  220 aacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    ||||| | |||||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  14048314 aacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 14048242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 14556050 - 14556260
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| ||||||||||||||||||||    
T  14556050 agttgtatgtagatatacacaagtgggtcagtagcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcggtggaacact 14556149  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg--atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatgg 321  Q
      |||||||||||||||||| ||||||||||||||||||||||  |  | ||||||||||||||||||  ||||| | |||   |||||||| |||||||    
T  14556150 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aatatgg 14556248  T
Q  322 taccacatgcat 333  Q
    ||||||||||||    
T  14556249 taccacatgcat 14556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 53748750 - 53748927
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  53748750 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 53748847  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  53748848 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttatggtaccacatgcat 53748927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 14063116 - 14062951
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||| ||||||||||||| |||||| ||||||||| ||||| ||||| |||  |||  ||||||||||||| ||||||||||||||||||||     
T  14063116 gttgtatgtaggtatacacaagtggagttagttgcataagcacaaaagcgggagggctctggccctggaacgccttgtcgttcaaagcggtggaacactt 14063017  T
Q  227 -gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
     |||||||||||||||||| |||||||||||||||||||||| |  | ||||||||||||||||||    
T  14063016 tgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaagaatgctttaaccattcga 14062951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 41799951 - 41800128
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  41799951 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 41800048  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  41800049 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 41800128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 42701403 - 42701226
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  42701403 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 42701306  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  42701305 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 42701226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 51602072 - 51602249
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  51602072 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 51602169  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  51602170 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 51602249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 51607953 - 51608130
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  51607953 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 51608050  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  51608051 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 51608130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 41529054 - 41529263
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||| ||||||||||||||||||||| |||||| ||||||||| ||||| ||||| |||  |||  || |||||||| | ||||||||||||||||||||    
T  41529054 agttatatgtagatatacacaagtggagttagttgcataagcacaaaagcgggagggctctggccctgaaacgccttatcgttcaaagcggtggaacact 41529153  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
      |||||||||||||||||| |||||||||||||||||||||| |  | ||||||||||||||||||  ||||| | |||   |||||||| ||||||||    
T  41529154 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aatatggt 41529252  T
Q  323 accacatgcat 333  Q
    |||||||||||    
T  41529253 accacatgcat 41529263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 1651000 - 1651193
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    ||||||||  |||||| ||||||||||||||||| ||||||||||||||| || || ||| ||||||||||||||| || ||| ||||| ||  ||||||    
T  1651000 gtcatataagtacatatgcattagtggagttgtaagtagatatacacaagcggagtcagttgcataagcataaaagcggtgagggcttctgccctggaac 1651099  T
Q  198 gccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| |||   ||||||||||| ||||||||||   | ||||||||||||||||    
T  1651100 gccttgtcgttcaaagcggtggaacacattgttgttcaaagcggagtttgacggtgaggactcatgtcctgataaaagaatgctttaaccattc 1651193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 27905446 - 27905254
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||||||||| ||| | ||||||||||||| || ||| || ||||   | ||||    
T  27905446 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgaataagcataaaagcggtgagggcctcggtcctagaac 27905347  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||   | ||||||||||||||||    
T  27905346 gccttgtcgttcaaagcgatggaacactatgttgttcaaagcggtgtt-agcggagaggactcatgtcctgataaaagaatgctttaaccattc 27905254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 126 - 268
Target Start/End: Original strand, 2585138 - 2585282
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||| ||||||||| || ||| |||||| |||||||| ||||| ||   |||  ||||||||||||| |||||||||||||||||||    
T  2585138 gagttgtatgtagatatgcacaagtggagtcagttgcataatcataaaagcgggagggccctggccctggaacgccttgtcgttcaaagcggtggaacac 2585237  T
Q  225 ta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    |  |||||||||||||||| | |||||||||||||||||||||||    
T  2585238 tttgttgttcaaagcggtgattagcggtgaggacttatgtcctga 2585282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 333
Target Start/End: Complemental strand, 16152661 - 16152484
Alignment:
Q  160 gcataagcataa-aagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggac 257  Q
    |||||| ||||| ||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  16152661 gcataatcataataagtgggagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggac 16152562  T
Q  258 ttatgtcctgatga--taatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||  |   |||||||||||||||| |  ||||| | |||   |||||||| |||||||||||||||||||    
T  16152561 ttatgtcctgaaaaatgaatgctttaaccattctattagcggtgagggctccggccctg-aatatggtaccacatgcat 16152484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 333
Target Start/End: Complemental strand, 40908809 - 40908583
Alignment:
Q  110 tacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgt 207  Q
    |||||| |||||||| ||||||||||||||||||||||||| || || ||| ||||||||||| |   | ||| | |||||   ||||| |||||||  |    
T  40908809 tacatatgcattagttggagttgtatgtagatatacacaagcggagtcagttgcataagcatacagcggtgagggtttcggtcctggaatgccttgtcat 40908710  T
Q  208 tcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtc 304  Q
    |||||| |||||||||| | |||||||||||||||||| | ||||||||||| ||||||||||   | |||||||||||||||| | ||||| | |||      
T  40908709 tcaaagtggtggaacacaatgttgttcaaagcggtgtttaacggtgaggactcatgtcctgataaaagaatgctttaaccattctatagcggtgagggct 40908610  T
Q  305 acggccctgaaatatggtaccacatgcat 333  Q
     ||||||||   |||||||||||||||||    
T  40908609 ccggccctg--ttatggtaccacatgcat 40908583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 37881634 - 37881521
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||| ||  |||||||    
T  37881634 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtaagtcgcatatgcataaaagcgggagggcttctgccctggaacg 37881535  T
Q  199 ccttgttgttcaaa 212  Q
    |||||| |||||||    
T  37881534 ccttgtcgttcaaa 37881521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 288
Target Start/End: Complemental strand, 14048219 - 14048121
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||    
T  14048219 tggaacgccttgtcgttcaaaacggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattc 14048121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 399
Target Start/End: Original strand, 10977120 - 10977265
Alignment:
Q  253 aggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcgggga 351  Q
    |||||||||||||||||||  ||||||||||||||| |  ||||| | |||   |||| ||||| |||||||||||||||||||| ||| || | | |||    
T  10977120 aggacttatgtcctgatga--atgctttaaccattcaattagcggtgagggcttcggctctgaa-tatggtaccacatgcatagtcgcatttattgagga 10977216  T
Q  352 gtcttagaggtgttgtcacgtca-ttgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||| |||||||||||||| ||||||||||    
T  10977217 gtcttagtggtgttgtcatgtcatttgcatgagtcgttattgttggttg 10977265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 13453964 - 13453847
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || |||   ||||||||||||| ||||| ||||| ||  |||||||    
T  13453964 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagttaaataagcataaaagcgggagggcttctgccctggaacg 13453865  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  13453864 ccttgtcgttcaaagcgg 13453847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 16221356 - 16221269
Alignment:
Q  205 tgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    |||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||| |  | ||||||||||||||||||    
T  16221356 tgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcgttgaggacttatgtcctgaaaaagaatgctttaaccattcga 16221269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 13886680 - 13886612
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||    
T  13886680 tggtaccacatgcatagtcgcatttgttgaggagtcttaggggtgttgtcaagtcattgcatgagtcgt 13886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 30146975 - 30146857
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||| || |||||||||||||| || ||| |||||| |||||||| ||||| ||   ||   ||||||||||||| |||||||||||||||||||    
T  30146975 gagttgtatctacatatacacaagtggagtcagttgcataatcataaaagcgggagggccctggtcctggaacgccttgtcgttcaaagcggtggaacac 30146876  T
Q  225 -tagttgttcaaagcggtg 242  Q
     | ||||||||||||||||    
T  30146875 tttgttgttcaaagcggtg 30146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 14821370 - 14821297
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||  ||||||||||||||||||    
T  14821370 tggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgttgttgcatgagtcgttgttg 14821297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 15546554 - 15546494
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  15546554 attgtcgaggagtcttagcggtgttgtcaagttgttgcatgagtcgttgttgttggttgaa 15546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 49051141 - 49051081
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttc 186  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| |||||    
T  49051141 gagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttc 49051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 355
Target Start/End: Complemental strand, 13452307 - 13452204
Alignment:
Q  250 gtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcgg 348  Q
    ||||||||||||||||||||||  ||||||||||||||| | |||||| | |||   |||||||||| |||||||||||||||||| ||||| |||| |     
T  13452307 gtgaggacttatgtcctgatga--atgctttaaccattcaaacagcggtgagggcttcggccctgaa-tatggtaccacatgcatatttgcatttgttga 13452211  T
Q  349 ggagtct 355  Q
    |||||||    
T  13452210 ggagtct 13452204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 15307015 - 15306957
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattg 377  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||||||||| |||||||    
T  15307015 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtcattg 15306957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 27849673 - 27849725
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  27849673 ggagtcttagcggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 27849725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 12932049 - 12931958
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||||||   ||  ||||| ||||||| |||||||||||    
T  12932049 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagagctcttgccctggaatgccttgtcgttcaaagcgg 12931958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 17176599 - 17176528
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||| | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||||||||||    
T  17176599 gtcatatacacatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataagcata 17176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 15244113 - 15244039
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    ||||| |||||||||||| ||| |||| | ||||||||||||| ||||| |  |||||||||||||||| |||||    
T  15244113 tggtaacacatgcatagtcgcatttgttgaggagtcttagaggggttgtgatatcattgcatgagtcgtcgttgt 15244039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 22726056 - 22726106
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgag 383  Q
    |||||||| |||||| |||||||||| |||||||||| |||||||||||||    
T  22726056 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtcattgcatgag 22726106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 401
Target Start/End: Complemental strand, 13444180 - 13444135
Alignment:
Q  356 tagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||    
T  13444180 tagaggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 13444135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 16147934 - 16147975
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  16147934 tatggtaccacatgcatagttgcaattgttgaggagtcttag 16147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 20889339 - 20889260
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | |||||||||| |||||||||| |||| |||||||||| | |||||||||||    
T  20889339 tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtca-tgcatgagtcttagttgttggttg 20889260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 53905283 - 53905375
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||| |||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  53905283 gagttgtatgtaaatatacacaagtggagtgagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 53905375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 46044920 - 46045068
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    |||||||||| || ||||||||||||  ||||||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||| ||||| || |    
T  46044920 agcggtgagggctaatgtcctgatga--atgctttaaccattcaaaagcggtgagggcttcggtcctgt--tttggtaccacatgcataattgcatttat 46045015  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| |||||  ||| ||||| ||||||||| |||||||||||||    
T  46045016 tgaggggtcttagtggtgtcatcatgtcat-gcatgagtctttgttgttggttg 46045068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 13899812 - 13899870
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  13899812 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 13899870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 18261284 - 18261226
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  18261284 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 18261226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 18271249 - 18271191
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||| |||||||||||||    
T  18271249 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcattgttgttggttg 18271191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 36037527 - 36037462
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||| |||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  36037527 tggtaccgcatgcatagttgcatttgtagaggagtcttagtggagttgtcatgtc-ttgcatgagtc 36037462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 30237714 - 30237673
Alignment:
Q  360 ggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| ||  |||||||||||||||||||||||||||    
T  30237714 ggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 30237673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 15360792 - 15360836
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  15360792 agttgtatgtagatatacacaagtggagtcagttgcataagcata 15360836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 16147733 - 16147781
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  16147733 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaa 16147781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 18166228 - 18166280
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||||| || ||| ||||| ||  ||||||||||||||||||||||||||    
T  18166228 gtcatatacgtatatatgcatttgtcaagttgtatgtagatatacacaagtgg 18166280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 18261546 - 18261483
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||||||||||||||||||    
T  18261546 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacacaagtgg 18261483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 18271511 - 18271448
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||||||||||||||||||    
T  18271511 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacacaagtgg 18271448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 20894958 - 20894879
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | |||||||||| |||||||||| |||| ||||||| || | |||||||||||    
T  20894958 tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtca-tgcatgaatcttagttgttggttg 20894879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 31665024 - 31664945
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||||  ||||  | | | |||||||||| |||||||||| ||||| ||||||||| | |||||||||||    
T  31665024 tggtaccacatgcataactgcatattttgaggagtcttagtggtgttgtcatgtcat-gcatgagtcttagttgttggttg 31664945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 41404825 - 41404904
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| || | ||||| ||||||||| |||||||||||||    
T  41404825 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgttatgtcat-gcatgagtctttgttgttggttg 41404904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 42220396 - 42220317
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | |||||||||| ||||| |||| |||| ||||||||||  ||| ||||||||    
T  42220396 tggtaccacatgcataattgcatttattgaggagtcttagtggtgtcgtcatgtca-tgcatgagtctctgtcgttggttg 42220317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 49548702 - 49548781
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | |||||||||| |||||||||| |||| |||||||||  | |||||||||||    
T  49548702 tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtca-tgcatgagttttagttgttggttg 49548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 88)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 88 - 395
Target Start/End: Original strand, 21566120 - 21566425
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| ||| |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21566120 atggagttgtaagtcatatatacaaatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcg 21566219  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  21566220 gctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcatgatgagaatgctttaaccatt 21566319  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||| ||| |||||||||||||||| ||||||||||||| |||||||||||| || ||| ||||||||||||| | ||||| ||| || ||||||| ||    
T  21566320 cgacaacggtgtgggtcacggccctg-aatatggtaccacgtgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtctttacatgagttgt 21566417  T
Q  388 tgttgttg 395  Q
    ||||||||    
T  21566418 tgttgttg 21566425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 12167444 - 12167230
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12167444 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 12167345  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  12167344 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagtggtgtgggtcatggccctgaattatggtacc 12167245  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  12167244 acatgcatagttgca 12167230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 19286353 - 19286139
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19286353 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 19286254  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  19286253 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagtggtgtgggtcatggccctgaattatggtacc 19286154  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  19286153 acatgcatagttgca 19286139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 121 - 385
Target Start/End: Complemental strand, 12942010 - 12941749
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  12942010 tagttgagttgtatgtagatatacacaggtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 12941911  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     ||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | | ||    
T  12941910 gcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-attttg 12941813  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||| || |||| | |||||||||| || ||||||| ||| |||||||||||    
T  12941812 gtaccacatgcatagtttcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 12941749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 29615165 - 29615383
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  29615165 tagtcgagttgtatgtagatatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtgga 29615264  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||    
T  29615265 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-gttatg 29615363  T
Q  321 gtaccacatgcatagttgca 340  Q
    ||||||||||||||||||||    
T  29615364 gtaccacatgcatagttgca 29615383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 19877537 - 19877323
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  19877537 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcagtggaacact 19877438  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  19877437 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagtggtgtgggtcatggccctgaattatggtacc 19877338  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  19877337 acatgcatagttgca 19877323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 19883313 - 19883099
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  19883313 gagttgtatgtagatatacacaggtggggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcagtggaacact 19883214  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  19883213 agttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagtggtgtgggtcatggccctgaattatggtacc 19883114  T
Q  326 acatgcatagttgca 340  Q
    |||||||||||||||    
T  19883113 acatgcatagttgca 19883099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 88 - 340
Target Start/End: Original strand, 19786805 - 19787057
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcat-aagcataaaagtgggagagcttc 186  Q
    ||||||| ||| |||||||  ||||||| | | |||| |||||||||||||||||||||| ||||| |||| |||| || ||| ||||||||||||||||    
T  19786805 atggagtagtaagtcatatg-atacatatgtagtagtcgagttgtatgtagatatacacaggtggggtagttgcattaaacatcaaagtgggagagcttc 19786903  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccat 286  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||    
T  19786904 ggctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccat 19787003  T
Q  287 tcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    ||||||| || |||||| | ||||||||| ||||||||||||||||||||||||    
T  19787004 tcgacagtggtgtgggtaatggccctgaattatggtaccacatgcatagttgca 19787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 24562497 - 24562275
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  24562497 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 24562399  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  24562398 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 24562300  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  24562299 ttatggtaccacatgcatatttgca 24562275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 129 - 385
Target Start/End: Original strand, 28290182 - 28290435
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||| ||||||| ||||||||||||| |||||||| |||||| |||||||    
T  28290182 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagtttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 28290281  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    || |||||| | |||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  28290282 tgctcaaagtgatgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-attatggtaccaca 28290379  T
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  28290380 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 28290435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 109 - 340
Target Start/End: Original strand, 25470645 - 25470875
Alignment:
Q  109 atacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgtt 208  Q
    ||||||| | |||||| ||||||||||||| |||||||  || || |||| |||||| ||| || ||||||||||||||||| |||||||||| || |||    
T  25470645 atacatatgtattagtagagttgtatgtaggtatacactggttgggtagttgcataatcatcaa-gtgggagagcttcggctctggaacgcctcgtcgtt 25470743  T
Q  209 caaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacgg 308  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||    
T  25470744 caaagcggtggaacactagttgttcaaagcggtgtggagaggtgaggacttaggtcctgctgagaatgctttaaccattcgacagcggtgtgggtcacgg 25470843  T
Q  309 ccctgaaatatggtaccacatgcatagttgca 340  Q
    ||||||| |||||||||||||||||| |||||    
T  25470844 ccctgaattatggtaccacatgcatatttgca 25470875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 34647618 - 34647836
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||  || || |||| |||||| ||| || ||||||||||||||||| |||||||||| || |||||||||||||||    
T  34647618 tagtagagttgtatgtagatatacactggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgcctcgtcgttcaaagcggtgga 34647716  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  34647717 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggagtgggtcacggccctgaattacg 34647816  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  34647817 gtaccacatgcatatttgca 34647836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 126 - 334
Target Start/End: Complemental strand, 23837787 - 23837579
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||| ||||||| || || ||||  ||||| ||| |||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  23837787 gagttgtatgtagagatacacaggttgggtagttccataaacatcaaagtgggagagcttcggctctggaacaccttgtcgttcaaaacggtggaacact 23837688  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  23837687 agttgttcaaagcggtgtggagcggtgagaacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggtacc 23837588  T
Q  326 acatgcata 334  Q
    |||||||||    
T  23837587 acatgcata 23837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 34640944 - 34641162
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||  || || |||| |||||| ||| || ||||||||||||||||| |||||||||| |  |||||||||||||||    
T  34640944 tagtagagttgtatgtagatatacactggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgcctcgccgttcaaagcggtgga 34641042  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  34641043 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggagtgggtcacggccctgaattacg 34641142  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  34641143 gtaccacatgcatatttgca 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 20 - 395
Target Start/End: Original strand, 24513673 - 24514066
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatggagt----------------cgtatgt 101  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||| |||| |||                |||||||    
T  24513673 gttgaatgaacttgatgtattagtatgattgctattaattatacagttttctgatgttggattggttgtgatgaagttgtcgaattatgaagtcgtatgt 24513772  T
Q  102 catatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgcc 200  Q
    |||||| | ||||| ||||| || ||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||| | ||||||  |||||||||    
T  24513773 catatatacacatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcggttgcataagcataaaagcgggagggtttcggccctggaacgcc 24513871  T
Q  201 ttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcg 298  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||||  | ||||||||||||||||||  ||||| |    
T  24513872 ttgtcgtttaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgatgacttatgtcctgaaaagaatgctttaaccattcgaatagcggtg 24513971  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttg 395  Q
     |||   |||||||||| |||||||||||||||||| ||||| |||||| ||||||||||   |||||||| | |||| ||||||||||||||||||    
T  24513972 agggctccggccctgaa-tatggtaccacatgcata-ttgcatttgtcgaggagtcttagtaatgttgtcatgccattacatgagtcgttgttgttg 24514066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 18788591 - 18788439
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18788591 gtcatatatacatatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctttggaacgc 18788492  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtg 252  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18788491 cttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtg 18788439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 18799571 - 18799419
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18799571 gtcatatatacatatatgcattagttgagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctttggaacgc 18799472  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtg 252  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18799471 cttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtg 18799419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 19588525 - 19588715
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||| ||||||| |||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||||  |||||||    
T  19588525 gtcatataaatacatatgcattgttggagttgtatgtagatatacaccagtggagttagttgcataagcataaaagcgggagggcttcggccctggaacg 19588624  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  || ||| ||||||||||||    
T  19588625 ccttatcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcatgaaaatgaatactttaaccattc 19588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 19726810 - 19726606
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||| ||||||    
T  19726810 gttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctagaacgccttgtcgttcaaagtggtggagcactag 19726711  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  19726710 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 19726613  T
Q  327 catgcat 333  Q
    |||||||    
T  19726612 catgcat 19726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 100 - 329
Target Start/End: Complemental strand, 22907198 - 22906969
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||||||| ||||||||    
T  22907198 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagctgcataagcataacagtgggagagcttcggctctggaacgc 22907099  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| |    
T  22907098 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtg 22906999  T
Q  299 tgggtcacggccctgaaatatggtaccacat 329  Q
     |||  |||| |||| | |||||||||||||    
T  22906998 agggctacggtcctg-attatggtaccacat 22906969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 19439909 - 19439782
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19439909 gagttgtatgtagatatacacaagtgggtcagttacataagcataaaagcgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacact 19439810  T
Q  226 agttgttcaaagcggtgttgagcggtga 253  Q
    ||||||||||||||||||| ||||||||    
T  19439809 agttgttcaaagcggtgtttagcggtga 19439782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 33682180 - 33682380
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||||| ||||||||||||| |||| ||||| || | || |||||||| ||||||  |||||||     
T  33682180 gtatgtagatatactcaaggggattagttgcataaacataacagtgggagagctttggctctggaatgcttagtcgttcaaagtggtggagtactagtta 33682279  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  33682280 ctcaaagtggtgt--agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 33682377  T
Q  331 cat 333  Q
    |||    
T  33682378 cat 33682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 128 - 335
Target Start/End: Complemental strand, 1592963 - 1592757
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||| ||||||||||||||| ||| ||| |||||||| |||||||||||||||||| ||||||||||| | |||||||| ||||||  |||||    
T  1592963 gttgtatgtaggtatacacaagtgggtcagttgcaaaagcataacagtgggagagcttcggctctggaacgccttctcgttcaaagtggtggagtactag 1592864  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||||||||||| | |||  |||| |||| | | ||||||||    
T  1592863 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattcgacagcggtgagggctacggtcctg-attttggtacca 1592766  T
Q  327 catgcatag 335  Q
    |||||||||    
T  1592765 catgcatag 1592757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 8760370 - 8760562
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||  |||||||||||||||| ||| |||||||||||||||  |||| ||||| ||  |||||||    
T  8760370 gtcatatacatatatatgcatttggttgagttgtatgtgaatatacacaagtgggtcagttgcataagcataaaagctggagggcttctgccctggaacg 8760469  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  8760470 ccttgttgttcaaagtggtggaacactagtcgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 8760562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 11289547 - 11289705
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||| ||||||| | | |||| |||||||||||||||||||||| || || |||| |||||| ||| || ||||||||||||||||| ||||||||    
T  11289547 gtcatataaatacatatgtaatagtagagttgtatgtagatatacacaggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgc 11289645  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggactt 259  Q
    || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11289646 ctcgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggactt 11289705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 14375253 - 14375444
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||| |||||||  ||||  ||||||||||||||||||||||| ||||| |||| | |||||||| |||||| ||||| ||||||||  |||||||    
T  14375253 gtcatataaatacatatacattgttggagttgtatgtagatatacactagtggagttatttgcataagcttaaaagcgggagggcttcggccctggaacg 14375352  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||  || ||| ||||||||||||    
T  14375353 ccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatcctttaaccattc 14375444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 128 - 293
Target Start/End: Original strand, 937655 - 937820
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||| ||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |    
T  937655 gttgtatgtagatatacacgagtgggtcaattgcataagcatagaagtgggagagcttcggctttggaacgccttgtcgttcaaagtggtggagcactcg 937754  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacag 293  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||    
T  937755 ttgctcaaagtggtgtt-agaggtgaggacttatgtcctgaaaatgaatgctttaaccattctacag 937820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 23835234 - 23835057
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  23835234 ttagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 23835137  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  23835136 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 23835057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 14724600 - 14724409
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||  ||||||    
T  14724600 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctctggccctggaac 14724501  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||| | ||||||||| |||||| ||||||  || ||||||||||||||||    
T  14724500 gccttgtcgttcaaagcagtggaacacttgttgttcaaagcggtgattagcggtgagaacttatatcctgaaaatgaatgctttaaccattc 14724409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 2708577 - 2708368
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| |||||| ||||| ||| ||||| ||||| ||| ||||  ||||||||||| | ||||||||||||||||||||    
T  2708577 agttgtatgtagatatacacaagtggagttagttgcataggcacaaaagcgggagggctccggccctggaacgccttatcgttcaaagcggtggaacact 2708478  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
      |||||||||||||||||| ||||||||| |||||||||||| |  | ||||||||||||||||||  ||||| | |||   ||||||| |||||||||    
T  2708477 ttgttgttcaaagcggtgtttagcggtgagaacttatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccct-aaatatggt 2708379  T
Q  323 accacatgcat 333  Q
    |||||||||||    
T  2708378 accacatgcat 2708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 14616213 - 14616382
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||  ||||||    
T  14616213 gtcatatagatacatatgcatttgttggagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctctggccctggaac 14616312  T
Q  198 gccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcct 266  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||    
T  14616313 gccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgatgacttatgtcct 14616382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 29416435 - 29416718
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| |||||||||||||||||||||||| |||| | |||||| |||||||| |||||| |||    
T  29416435 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgggagagcttcggctctggagcaccttgtcgttcaaagtggtggagcac 29416534  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||| | | |||  ||| || |||| |||||||    
T  29416535 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagctgtgagggctacgaccttgaa-tatggta 29416633  T
Q  324 ccacatgcata------gttgcaatt-gtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||       || ||| || || |  ||||| ||| || ||||||  |||||||||||||||||||||||||||||||    
T  29416634 ccacatgcatgtgcattgtcgcattttgttgttgagtcgtagtggagttgtcgtgtcattgcatgagtcgttgttgttggttgaa 29416718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 333
Target Start/End: Complemental strand, 14033319 - 14033142
Alignment:
Q  154 ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtga 253  Q
    ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || |||||    
T  14033319 ttagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtga 14033222  T
Q  254 ggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||    
T  14033221 ggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 14033142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 19300611 - 19300846
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || |||||||||||||||||| |||||||| | | ||||||||||||||| || ||| |||||||  |||||||    
T  19300611 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacataagtgggtcaattgcataagcataaaagcggtgagggcttcggtcttggaac 19300710  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagc 294  Q
    || |||| |||||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||   | |||||||||||||||| | |||    
T  19300711 gctttgtcgttcaaagtggtggaacactatgttgttcaaagcggtgtt-agcggtgaggactcatgtcctgataaaagaatgctttaaccattctatagc 19300809  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    || | |||   ||| ||||  ||||||||||||||||||    
T  19300810 ggtgagggcttcggtcctg--atatggtaccacatgcat 19300846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 28359831 - 28360032
Alignment:
Q  131 gtatgtagatataca-caagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    ||||||||||||||| |||| || ||||| |||| | ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  28359831 gtatgtagatatacaacaaggggattagttgcattaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 28359930  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| ||||||||||||||||||||  || |||||||||||||||||  | |||||||||||    
T  28359931 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacaaaggtgtgggtcacggccctgatttttggtaccacat 28360028  T
Q  330 gcat 333  Q
    ||||    
T  28360029 gcat 28360032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 27562514 - 27562715
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||| | ||||| || ||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  27562514 gtatgtagatatactcaatggggattagttgcattaacataacagcgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 27562613  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    |||||||||||    
T  27562614 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgattcttggtaccacat 27562711  T
Q  330 gcat 333  Q
    ||||    
T  27562712 gcat 27562715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 8768117 - 8768260
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||| ||| |||||||||||||||  |||| ||||| ||  |||||||    
T  8768117 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagctggagggcttctgccctggaacg 8768216  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtg 242  Q
    |||||| |||||||  ||||||||||||||||||||||||||||    
T  8768217 ccttgtcgttcaaaatggtggaacactagttgttcaaagcggtg 8768260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 19819106 - 19818944
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||| ||| ||||  ||||| ||||||| |||||||| |||||||||||    
T  19819106 agttgtatgtagatatacacaagtggagttagttgcataagcacaaaagcgggag-gctccggccctggaatgccttgtcgttcaaagaggtggaacact 19819008  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
      |||||||||||||||||| |||||||| ||||||||||||||    ||||||||||||||||    
T  19819007 ttgttgttcaaagcggtgtttagcggtgatgacttatgtcctgaaatgaatgctttaaccattc 19818944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 385
Target Start/End: Complemental strand, 15457697 - 15457414
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    ||||||||  |||||| ||||| || ||||||||||||||||||||||||||| || |||||||||| |||||||  | |||  | ||||   |||||||    
T  15457697 gtcatataagtacatatgcatt-gttgagttgtatgtagatatacacaagtggagtcagtcgcataa-cataaaacggtgaggacctcggtcctggaacg 15457600  T
Q  199 ccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagc 294  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | | |    
T  15457599 ccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgatataaagaatgctttaaccattctataac 15457502  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    || | |||   ||||||||  ||||||||||||||||||||||||| |||| | ||||||||||||| || |||| |||| ||||||||||    
T  15457501 ggtgagggcttcggccctg--atatggtaccacatgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtca-tgcatgagtc 15457414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 385
Target Start/End: Complemental strand, 15464292 - 15464009
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    ||||||||  |||||| ||||| || ||||||||||||||||||||||||||| || |||||||||| |||||||  | |||  | ||||   |||||||    
T  15464292 gtcatataagtacatatgcatt-gttgagttgtatgtagatatacacaagtggagtcagtcgcataa-cataaaacggtgaggacctcggtcctggaacg 15464195  T
Q  199 ccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagc 294  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | | |    
T  15464194 ccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgatataaagaatgctttaaccattctataac 15464097  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    || | |||   ||||||||  ||||||||||||||||||||||||| |||| | ||||||||||||| || |||| |||| ||||||||||    
T  15464096 ggtgagggcttcggccctg--atatggtaccacatgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtca-tgcatgagtc 15464009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 21724733 - 21724893
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||| ||||||||||||||| ||| ||| |||||||| |||||||||||||||||| ||||||||||  | | |||||| ||||||  |||||    
T  21724733 gttgtatgtaggtatacacaagtgggtcagttgcaaaagcataacagtgggagagcttcggctctggaacgcctaatagatcaaagtggtggagtactag 21724832  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||| |||||| ||| || || ||||||||||||||||||||  || ||||||||||||||||    
T  21724833 ttgctcaaagtggtatt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattc 21724893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 89 - 288
Target Start/End: Original strand, 14995882 - 14996084
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttc 186  Q
    |||||||||| |||| ||||||| ||  ||||| || |||||||||||||||||||||||| || || ||| |||||| |||||||| || ||| ||||     
T  14995882 tggagtcgtaagtcacatacatatatgtgcatt-gttgagttgtatgtagatatacacaagcggagtcagttgcataatcataaaagcggtgagggctta 14995980  T
Q  187 ggctttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga-taatgctttaacc 284  Q
     ||  ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |  |||||||||| |||||||||  |  ||||||||||||    
T  14995981 tgccctggaacgccttgtcgttcaaagcggtggaacacattgttgttcaaagcggtgtttaatggtgaggactcatgtcctgaaaaggaatgctttaacc 14996080  T
Q  285 attc 288  Q
    ||||    
T  14996081 attc 14996084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 100 - 358
Target Start/End: Complemental strand, 31251604 - 31251344
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    ||||||||  |||||| ||||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||  ||  ||  | ||||   ||||||    
T  31251604 gtcatataagtacatatgcatttgttgagttgtatgtagatatacacaagtggagttagttgcataagcataaaaacggttaggacctcggtcctggaac 31251505  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacag 293  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | |     
T  31251504 gccttgtcattcaaagcggtggaacactatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaagaatgctttaaccattctataa 31251407  T
Q  294 cggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||| | |||   ||||||||  ||||||  ||||||||||||||||| |||| | ||||||||||    
T  31251406 cggtgagggcttcggccctg--atatggcgccacatgcatagttgcatttgttgaggagtcttag 31251344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 125 - 333
Target Start/End: Original strand, 14581825 - 14582034
Alignment:
Q  125 ggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||| ||||||| ||| |||||||| |||||||||||| || || |||  ||||||   ||||| |||||||  ||||||| || ||||||    
T  14581825 ggagttgtatgtatatatacataag-gggttagttgcataagcataatagcggtgaggacttcggtcctggaatgccttgtcattcaaagtggaggaaca 14581923  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatg--ataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    | | |||||||||||||||||| | ||||||||||| |||||||||||  | |||||||||||||||| | ||||| | ||| | ||||||||   ||||    
T  14581924 caatgttgttcaaagcggtgtttaacggtgaggactcatgtcctgatgaaagaatgctttaaccattctatagcggtgagggcctcggccctg--ttatg 14582021  T
Q  321 gtaccacatgcat 333  Q
    |||||||||||||    
T  14582022 gtaccacatgcat 14582034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 23234869 - 23234986
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| ||||| ||  |||||||    
T  23234869 gtcatatacatatatatgcatttggtcgagttgtatgtagatatacacaagtgagtcagttgcataagcataaaagcgggagggcttctgccctggaacg 23234968  T
Q  199 ccttgttgttcaaagcgg 216  Q
    |||||| |||||||||||    
T  23234969 ccttgtcgttcaaagcgg 23234986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 18786148 - 18785996
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||||||  | |||||||||||||||| |  ||||| | |||   | |||||||| |||||||||||||||||||||||| |||    
T  18786148 agcggtgaggacttatgtcctgaata-aatgctttaaccattcaattagcggtgagggcttctgccctgaa-tatggtaccacatgcatagttgcatttg 18786051  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |   |||||||||  |||||||||  || ||||||||||||||||||||||||||    
T  18786050 ttcaggagtcttattggtgttgtcctgtaattgcatgagtcgttgttgttggttg 18785996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 17414242 - 17414114
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||| ||| |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||      
T  17414242 atggagttgtaagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctct 17414144  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
    |||  ||||||||||||| |||||||||||    
T  17414143 ggccctggaacgccttgtcgttcaaagcgg 17414114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 25749711 - 25749639
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||| ||| |||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  25749711 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttgaa 25749639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 4476574 - 4476314
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  4476574 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 4476475  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  4476474 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 4476378  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||| ||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  4476377 gtaccacatgcatagtcgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 4476314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 21365435 - 21365695
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  21365435 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 21365534  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | |||||||||||||||| | | ||  | | |   |||| |||  |||||    
T  21365535 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctg--atatg 21365631  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  21365632 gtaccacatgcataattgcatttgttgaggagtcttagaagggttgtcatgtc-ttgcatgagtc 21365695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 23969417 - 23969677
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  23969417 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 23969516  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | |||||||||||||||| | | ||  | | |   |||| |||  |||||    
T  23969517 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctg--atatg 23969613  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  23969614 gtaccacatgcataattgcatttgttgaggagtcttagaagggttgtcatgtc-ttgcatgagtc 23969677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 26418633 - 26418723
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||| |||||||||||| || ||||||||| ||||||||| ||||| ||||| |   ||||||||||||| |||||||||||    
T  26418633 gagttgtatgtaggtatacacaagtgagtcagtcgcatatgcataaaagcgggagggcttctgtcctggaacgccttgtcgttcaaagcgg 26418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 18799425 - 18799357
Alignment:
Q  292 agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagagg 361  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||    
T  18799425 agcggtgtgggtcacggccctgaa-tatggtaccacatgcatagttgcatttttcgaggagtcttagagg 18799357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 10582781 - 10582899
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   |   ||||||    
T  10582781 gtcatatacatatatatgcatttgtcgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgtcctggaac 10582880  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  10582881 gccttgtcgttcaaagcgg 10582899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 19472490 - 19472564
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | || ||||||||||| |||||| ||||||||||||||||| |||||    
T  19472490 tggtaccacatgcatagtcgcatttgttgaggggtcttagaggtattgtcatgtcattgcatgagtcgtcgttgt 19472564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 23233377 - 23233467
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| |||| |||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  23233377 agttgtatgtagatatacacaagtggagtaagttgcatgagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 23233467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 25396014 - 25395940
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | |||||||||||||||| ||||  |||||||||||||||| |||||    
T  25396014 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgtcgtcatatcattgcatgagtcgtcgttgt 25395940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 5290073 - 5290200
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| |||||||||| ||||| || |||    
T  5290073 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagcataaaagcgggagggcctcg 5290171  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |    |||||||||||| |||||||||||    
T  5290172 gtccgggaacgccttgtcgttcaaagcgg 5290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 9186693 - 9186621
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatg 90  Q
    ||||||||| ||||||||||||||||||||   |||||||||||| |||||||||||||||||||||| ||||    
T  9186693 gttgaatgaacttgatgtattagtatgattattattaattatacatttttctgatgttggattggttgtgatg 9186621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 18788445 - 18788378
Alignment:
Q  292 agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagag 360  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||| || ||| ||||||||||||    
T  18788445 agcggtgtgggtcacggccctgaa-tatggtaccacatgtatagttgcatttttcgaggagtcttagag 18788378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 23105177 - 23105117
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  23105177 attgtcgaggagtcttagcggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 23105117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 23021420 - 23021568
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    ||||||||||||||||||||||||||  || |||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||| ||||| || |    
T  23021420 agcggtgaggacttatgtcctgatga--attctttaaccattctaaagcggtgagggcttcggtcctgt--tttggtaccacatgcataattgcatttat 23021515  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  23021516 tgaggtgtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 23021568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 19451531 - 19451403
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||| ||| |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||| ||||||| ||||| |||      
T  19451531 atggagttgtaagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcataagtataaaagcgggagggctct 19451433  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
      |  ||||||||||||| |||||||||||    
T  19451432 ttccctggaacgccttgtcgttcaaagcgg 19451403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 20008847 - 20009093
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttc-aaagcggtggaac 222  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| |||| ||| || ||||||    
T  20008847 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaaacgatggaac 20008946  T
Q  223 acta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    |||| |||||||||| || |||| | || |||||||| ||||||||||   | |||||||||||||||| | | ||  | |||   |||| |||   |||    
T  20008947 actatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctg--ttat 20009043  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||| || |||| | |||||||||| || |||||||    
T  20009044 ggtaccacatgcatagttacatttgttgaggagtcttagtggagttgtca 20009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 22346542 - 22346491
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  22346542 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 22346491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 29265438 - 29265387
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  29265438 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 29265387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 11283987 - 11284029
Alignment:
Q  298 gtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  11283987 gtgggtcacggccctgaattatggtaccacatgcataattgca 11284029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 19468031 - 19467977
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggag 180  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  19468031 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggag 19467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 25396250 - 25396121
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||| |||||||||||||| || ||| ||||||||||| |||| ||||| |||     
T  25396250 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtatatatacacaagtggagtcagttgcataagcatataaagcgggagggctc 25396152  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      ||  ||||||||||||| |||||||||||    
T  25396151 ttgccctggaacgccttgtcgttcaaagcgg 25396121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 12447336 - 12447415
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  12447336 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 12447415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 17894661 - 17894740
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | |||||||||| |||||||||| |||| |||||||||| | |||||||||||    
T  17894661 tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtca-tgcatgagtcttagttgttggttg 17894740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 19472292 - 19472348
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggag 180  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||    
T  19472292 gagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagtgggag 19472348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 20011100 - 20011152
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||||||| |||| | |||||||||| || |||||||    
T  20011100 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 20011152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 5290235 - 5290326
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||  ||||||  |||||||  ||||||||||||||| ||||||| | |||  ||| ||||||| |||||||||||||||||| |||||    
T  5290235 agcggtgagagcttatgctctgatga--atgctttaaccattctacagcggtgagggctacgtccctgaa-tatggtaccacatgcatatttgca 5290326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 361 - 400
Target Start/End: Complemental strand, 18137420 - 18137381
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  18137420 gtgttgtcatatcattgcatgagtcgttgttgttggttga 18137381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 24720807 - 24720716
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| | ||| |||   ||  ||||||||||||| |||||||||||    
T  24720807 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgagagggctcttgccctggaacgccttgtcgttcaaagcgg 24720716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 26418758 - 26418798
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  26418758 agcggtgaggacttatgtcctgatg--aatgctttaaccattc 26418798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 18316178 - 18316228
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||| ||||||    
T  18316178 ggagtcttagaggtgttgtcaagtagttgcatgaatcgttgttgctggttg 18316228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 22798703 - 22798761
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||| ||||||||||||||    
T  22798703 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagttgttgttgttggttg 22798761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 334
Target Start/End: Original strand, 23235021 - 23235107
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcata 334  Q
    ||||||||| |||||||||||||||  ||||||||||||||||  ||||||| | |||   ||||| || ||||||||||||||||||||    
T  23235021 agcggtgagtacttatgtcctgatg--aatgctttaaccattcaaacagcggtgagggcttcggccttg-aatatggtaccacatgcata 23235107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 24412487 - 24412537
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  24412487 ggagtcttagcggtgttgtctagtagttgcatgagtcgttgttgttggttg 24412537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 14132983 - 14133036
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgg 152  Q
    |||||||||||| ||| ||||| || || |||||||||||||||||||||||||    
T  14132983 gtcatatacatatatatgcatttgttgaagttgtatgtagatatacacaagtgg 14133036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 385
Target Start/End: Complemental strand, 25347167 - 25347031
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||| | || ||||||||||  ||||||||||||||| | |||||| | |||   || ||||||  |||||||||||||||||||||||| ||     
T  25347167 agcggtgagggcctaggtcctgatga--atgctttaaccattcaaacagcggtgagggcttcgaccctgat-tatggtaccacatgcatagttgcatttt 25347071  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    | | || ||||||| || ||||||| ||| |||||||||||    
T  25347070 ttgaggtgtcttagtggagttgtcatgtc-ttgcatgagtc 25347031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 9099971 - 9100019
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  9099971 gagttgtatgtagatatacactagtggagtcagttgcataagcataaaa 9100019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 9100170 - 9100236
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||||| ||||| | ||||||||||  | ||||||| ||| |||||||||||    
T  9100170 tatggtaccacatgcatagttgc-attgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtc 9100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 21469677 - 21469625
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||||  ||||||||| ||| | |||||||||||||||| |||||||||    
T  21469677 gagtcttagtagtgttgtcatgtcgtcgcatgagtcgttgttgatggttgaat 21469625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 29096821 - 29096755
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||||| ||||| | ||||||||||  | ||||||| ||| |||||||||||    
T  29096821 tatggtaccacatgcatagttgc-attgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtc 29096755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 29097020 - 29096972
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  29097020 gagttgtatgtagatatacactagtggagtcagttgcataagcataaaa 29096972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 199; Significance: 1e-108; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 88 - 402
Target Start/End: Original strand, 15389 - 15701
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  15389 atggagttgtatgtcatatacataaatatgcattagttgagttgtatgtagatatacacaagggggttagttgcacaagcataaaagtgggagagcttcg 15488  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
     || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15489 actctggaacgccttgtcattcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccatt 15588  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    ||||| ||| |||||||||||||||| |||| ||||||||||||||||||||| || | | ||||||||||||| | ||||| |||||| ||||||| ||    
T  15589 cgacaacggtgtgggtcacggccctg-aataaggtaccacatgcatagttgcatttatagaggagtcttagagg-ggtgtcatgtcattacatgagttgt 15686  T
Q  388 tgttgttggttgaat 402  Q
    | |||||| ||||||    
T  15687 tattgttgattgaat 15701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 100 - 268
Target Start/End: Complemental strand, 71322 - 71154
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||| ||||||||    
T  71322 gtcatatacatatatatgcattggttgagttgtatgtagatatacacaagtgtgtcagttgcataagcataaaagcgggagagcttcggctctggaacgc 71223  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  71222 cttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctga 71154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 76728 - 76649
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||| || | | |||||| |||||||||| |||||||||  || |||||||||||| |||||||||||||    
T  76728 tggtaccacatgcattgtcgta-ttgtcgaggagtcttagcggtgttgtcgagtaattgcatgagtcattgttgttggttg 76649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 76928 - 76837
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcg 215  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||   |||||||||||| ||||||||||    
T  76928 gagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgcccgggaacgccttgtcgttcaaagcg 76837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 126 - 398
Target Start/End: Original strand, 10229 - 10499
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  10229 gagttgtatgtagatatacataagtgggtcagttgcataagcataaaagtgggagagcttcagctctggaacgccttgtcgttcaaagcggtggaacact 10328  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10329 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-aatatggtacc 10427  T
Q  326 acatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    ||||||||||||||| |||| | ||||||||||| |||| |||| ||| |||||||||||||||| |||||||    
T  10428 acatgcatagttgcatttgt-gaggagtcttagatgtgtcgtcatgtctttgcatgagtcgttgtcgttggtt 10499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 88 - 384
Target Start/End: Complemental strand, 10443 - 10150
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||||||| |||||||| | | ||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10443 atggagtcgtaagtcatatatacatatatgcattagttgagttgtatgtggatatacacaaatgggttagtcgcataagcataaaagtgtgagagcttcg 10344  T
Q  188 gctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10343 gctctggaacgccttgtcgttcaaagcggtagaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccatt 10244  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| ||| ||||||||||||| | ||||| |||||| |||||||    
T  10243 cgacagcggagtgggtcacggccctg-aatatggtaccacaagcatagttgc-attatcgaggagtcttagagg-ggtgtcatgtcattacatgagt 10150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 189; Significance: 1e-102; HSPs: 8)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 89 - 385
Target Start/End: Original strand, 36751 - 37045
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcgg 188  Q
    ||||||| || |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  36751 tggagtcataagtcatatatacatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgagagagcttcgg 36850  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  36851 ctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgataagaatgctttaaccattc 36950  T
Q  289 gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||| |||||||| ||||||| | |||||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  36951 gacagcggtgtgggtcatggccctg-attatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 37045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 192 - 411
Target Start/End: Original strand, 44054 - 44273
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
    |||||| | |||||||||||||||||||||||||  ||||| |||||||||||| |||||||| |||||||||||| |  | ||||||||||||||||||    
T  44054 tggaacactttgttgttcaaagcggtggaacactttgttgt-caaagcggtgtttagcggtgatgacttatgtcctaaaaagaatgctttaaccattcga 44152  T
Q  291 c-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttg 389  Q
      ||||| | |||    ||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  44153 ttagcggtgagggctctggccctgaa-tatggtaccacatggatagttgcatttgtcgaggagtcttagaggtgctgtcatgtcattgcatgagtcgttg 44251  T
Q  390 ttgttggttgaatcgttatatt 411  Q
    ||||||||||||| | ||||||    
T  44252 ttgttggttgaattgctatatt 44273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 43929 - 44080
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggct 190  Q
    |||||||||||||||| | | ||| ||||| || |||| |||||||||||||||||||||| ||  || |||||||||| |||| ||||| |||||||||    
T  43929 agtcgtatgtcatatatacatatatgcatt-gtcgagtggtatgtagatatacacaagtggagtcggttgcataagcattaaagcgggagggcttcggct 44027  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
     ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  44028 ctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtg 44080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 40664 - 40549
Alignment:
Q  167 cataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcct 266  Q
    ||||| ||||| |||||||||||| ||||| || | || |||||||| ||||||  |||||||  |||||| |||||  || ||||||||||||||||||    
T  40664 cataacagtggaagagcttcggctctggaatgcttggtcgttcaaagtggtggagtactagttactcaaagtggtgt--agtggtgaggacttatgtcct 40567  T
Q  267 gatgataatgctttaacc 284  Q
    | ||| ||||||||||||    
T  40566 gttgagaatgctttaacc 40549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 9463 - 9344
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggtt-agtcgcataagcata-aaagtgggagagcttcggctttggaa 196  Q
    |||||||||||| ||| ||||| || || ||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  |||||    
T  9463 gtcatatacatatatatgcatttgttgaagttgtatgtagatatacacaagtggattcagttgcataagcatataaagcgggagggctcttgccctggaa 9364  T
Q  197 cgccttgttgttcaaagcgg 216  Q
    |||||||| |||||||||||    
T  9363 cgccttgtcgttcaaagcgg 9344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 45105 - 45014
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||| ||||||||||||| |||||||||||    
T  45105 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgctctggaacgccttgtcgttcaaagcgg 45014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 43837 - 43904
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattatacatttt--ctgatgttggattggtt 84  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||   ||||||||||||||||    
T  43837 gttgaatgaacttgatgtattagtatgattgttattaattatacatttttcttgatgttggattggtt 43904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 8493 - 8538
Alignment:
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    ||||||||| |||||||||||||||||  | |||||||||||||||    
T  8493 cgacagcggtgtgggtcacggccctgatttttggtaccacatgcat 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 85)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 117 - 402
Target Start/End: Original strand, 22439687 - 22439970
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  22439687 gcattagttgagttgtatgtagatatacataagtgggttagttgcataagcataaaagtgggagagctccggctctagaacgccttgtcgttcaaagcgg 22439786  T
Q  217 tggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaa 316  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||    
T  22439787 tgaaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgagaatgttttaaccattcgacagcggtgtgggtcacggccctg-aa 22439885  T
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||||| ||||||| ||| || ||| ||||||    
T  22439886 tatggtaccacatgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtcattacatgagttgttattattgattgaat 22439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 123 - 398
Target Start/End: Complemental strand, 19511209 - 19510935
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  19511209 gtggagttgtatgtagagatacacaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaatgccttgtcgttcaaagcggtggaac 19511110  T
Q  223 actagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggt 322  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  19511109 actagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatggt 19511010  T
Q  323 accacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||||||||||| || | | ||||| |||| ||    |||| ||| ||||||||||||||||||||||||    
T  19511009 accacatgcatagttgcatttattgaggagtattagggggaaggtcatgtc-ttgcatgagtcgttgttgttggtt 19510935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 100 - 340
Target Start/End: Original strand, 1857448 - 1857687
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || |||||||||||||||||||||| || || |||| ||||| |||| |||||||||||||||||||| ||||||||    
T  1857448 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaggttgggtagttgcata-gcatcaaagtgggagagcttcggctctggaacgc 1857546  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcg 298  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |    
T  1857547 cttgtcgttcaaagcggtggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtg 1857646  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  1857647 tgggtcacggccctg-aatatggtaccacatgcatatttgca 1857687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 100 - 340
Target Start/End: Original strand, 21675416 - 21675655
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||    
T  21675416 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgc 21675514  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcg 298  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |    
T  21675515 cttgtcgttcaaagcggtggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtg 21675614  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  21675615 tgggtcacggccctg-aatatggtaccacatgcatatttgca 21675655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 121 - 385
Target Start/End: Original strand, 37805282 - 37805543
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||    
T  37805282 tagttgagttgtatgtagatatacacaggtgggtcagttgcataagcataaaagtgggagagcttcggctctgtaacgccttgtcgttcaaagtggtgga 37805381  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
     ||||||||| |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| | | ||    
T  37805382 gcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacgaccctg-attttg 37805479  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  37805480 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 37805543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 126 - 340
Target Start/End: Complemental strand, 23527656 - 23527441
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcat-aagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||||||||||||| ||||| |||| |||| || ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  23527656 gagttgtatgtagatatacacaggtggggtagttgcattaaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacac 23527557  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtac 324  Q
    ||||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  23527556 tagttgttcaaagcggtgtggagcggtgaggacttaggtcctgctgagaatgctttaaccattcgacagcggtgtgggtcatggccctgaattatggtac 23527457  T
Q  325 cacatgcatagttgca 340  Q
    |||||||||| |||||    
T  23527456 cacatgcatatttgca 23527441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 129 - 385
Target Start/End: Complemental strand, 9775669 - 9775416
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  9775669 ttgtatgtagatatactcaagtgggtcagttgcatgagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactagt 9775570  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    || |||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| | | ||||||||||    
T  9775569 tgctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagtggtgtgggtcacggccctg-attttggtaccaca 9775472  T
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  9775471 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 9775416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 92 - 385
Target Start/End: Original strand, 23112673 - 23112965
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggct 190  Q
    |||||||  ||||||| | | ||| |||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||| || ||  || ||||      
T  23112673 agtcgtaaatcatatatacatatatgcattagttgagttgtatgtagatatacacaagtgggtcatttgcataagcataaaagcggtgatggcctcggtc 23112772  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcg 289  Q
     |||||| |||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  23112773 ctggaacaccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcg 23112871  T
Q  290 acagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||| | |||||||||||||| | |||||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  23112872 acagcggtgagggtcacggccctg-attatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 23112965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 20937827 - 20937594
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  20937827 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctgtggaacgc 20937728  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || |||||||||||||||| |||  || |||||||||||||||| ||| ||| |    
T  20937727 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtttagtggtgaggacttatgtcttgaaaatgaatgctttaaccattctacatcggtg 20937628  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     |||  |||| |||| | |||||||||||||||||    
T  20937627 agggctacggtcctg-attatggtaccacatgcat 20937594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 22312773 - 22313005
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||    
T  22312773 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcgactctggaacgc 22312872  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||| | || ||||||||||||||||||||  || |||||||||||||||| ||||||| |    
T  22312873 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtg-tcagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtg 22312971  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     |||  |||| |||| | |||||||||||||||||    
T  22312972 agggctacggtcctg-attatggtaccacatgcat 22313005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 758224 - 758427
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  758224 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 758323  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    ||| |||||| |||||| || |||||||||||| |||||||    |||||||||||||||| ||||||| | |||  |||| |||| | |||||||||||    
T  758324 ttgctcaaagtggtgtt-agtggtgaggacttacgtcctgaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtaccac 758421  T
Q  328 atgcat 333  Q
    ||||||    
T  758422 atgcat 758427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 17264770 - 17264971
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||| | |||||||||||||||||| ||||||||   || |||||||| ||||||  |||||||     
T  17264770 gtatgtagatatactcaaggggattagttgcataaacatcacagtgggagagcttcggctctggaacgctcggtcgttcaaagtggtggagtactagtta 17264869  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  17264870 ctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacatg 17264968  T
Q  331 cat 333  Q
    |||    
T  17264969 cat 17264971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 22175216 - 22175014
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataag-cataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||| || ||||| ||||||  ||||| |||||||||||||||||| |||||||| | || |||||||| ||||||  |||||||    
T  22175216 gtatgtagatatactcaaggggattagttgcataaaacataacagtgggagagcttcggctctggaacgcttggtcgttcaaagtggtggagtactagtt 22175117  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||| || ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  22175116 actcaaagtggtgtt-agtggttaggacttatgtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 22175018  T
Q  330 gcat 333  Q
    ||||    
T  22175017 gcat 22175014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 17271252 - 17271453
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||| |||| || ||||| |||||| ||| | |||||||||||||||||| ||||||||   || |||||||| ||||||  |||||||     
T  17271252 gtatgtagatatactcaaggggattagttgcataaacatcacagtgggagagcttcggctctggaacgctcggtcgttcaaagtggtggagtactagtta 17271351  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||  | ||||||||||||    
T  17271352 ctcaaagtggtgtt-agtggtgaggacttatgtcctgatgagaatgctttaaccattcaacagcggtgtgggtcacggccctgatttttggtaccacatg 17271450  T
Q  331 cat 333  Q
    |||    
T  17271451 cat 17271453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 268
Target Start/End: Original strand, 22007865 - 22008035
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataa-aagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||| ||||||||  |||||||    
T  22007865 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtgggtcagttgcataatcataataagtgggagggcttcggccctggaacg 22007964  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    |||||| ||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||| |||||||    
T  22007965 ccttgtcgttcaaagcggtggaacactttgttgttcaaagcgatgtttagcggtgaggacttaggtcctga 22008035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 128 - 296
Target Start/End: Original strand, 22509142 - 22509310
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| | ||||||||||||| |||||||| ||||||  |||||    
T  22509142 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggatctggaacgccttgtcgttcaaagtggtggagtactag 22509241  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcgg 296  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| |||||||    
T  22509242 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcgg 22509310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 126 - 401
Target Start/End: Complemental strand, 23539009 - 23538736
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| |||||||||| ||||||||||||| ||||||| ||||| |||||||| |||||| |||    
T  23539009 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgagagagcttcggctctggaacgacttgtcgttcaaagtggtggagcac 23538910  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||| | ||||||| | |||  ||||||||| |||||||||    
T  23538909 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccatactacagcggtgagggctacggccctg-aatatggta 23538811  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||    || ||||| | |||||||||| || || ||   ||  |||||||||||||||||||||||||||    
T  23538810 ccacatgcat--gcgc-attgttgaggagtcttagtggagtcgttgagtagttgcatgagtcgttgttgttggttgaa 23538736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 21678242 - 21678443
Alignment:
Q  131 gtatgtagatatacacaagtggg-ttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||  ||| ||||| |||||| ||||| |||||||||||||||||| ||||| || | || |||||||| ||||||  |||||||    
T  21678242 gtatgtagatatactcaatggggattagttgcataaacataacagtgggagagcttcggctctggaatgcttagtcgttcaaagtggtggagtactagtt 21678341  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
      |||||| |||||  || ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  21678342 actcaaagtggtgt--agtggtgaggacttatgtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgatttttggtaccacat 21678439  T
Q  330 gcat 333  Q
    ||||    
T  21678440 gcat 21678443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 401
Target Start/End: Complemental strand, 10816982 - 10816709
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||| | |||||||||||||| ||   | |||||| |||||||||||||||||||||||| ||||||||||||| |||||||  |||||| |||    
T  10816982 gagttgtatgaatatatacacaagtggagtccattgcataatcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaattggtggagcac 10816883  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggta 323  Q
    |||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  ||| | ||| |||||||||    
T  10816882 tagttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacgacactg-aatatggta 10816784  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||||    || ||||| | |||||||||| || || ||   ||  |||||||||||||||||||||||||||    
T  10816783 ccacatgcat--gcgc-attgttgaggagtcttagtggagtcgttgagtagttgcatgagtcgttgttgttggttgaa 10816709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 385
Target Start/End: Complemental strand, 34829236 - 34828977
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| || |||  | ||||   ||||||||||||| ||||||||||||||||||||    
T  34829236 agttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacact 34829137  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | |||||||||||||||||| |  |||||||||| ||||||||||    | |||||||||||||||| | | ||| | |||   |||| |||  ||||||    
T  34829136 atgttgttcaaagcggtgtt-aatggtgaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggctccggctctg--atatgg 34829040  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  34829039 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 34828977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 100 - 264
Target Start/End: Original strand, 6728201 - 6728368
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| |||||| ||||||||| |||||  |||| ||| ||||  || |||    
T  6728201 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaagtggagttagttgcataagcacaaaagcaggagggctccggccctgaaac 6728300  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtc 264  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  6728301 gccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtc 6728368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 288
Target Start/End: Original strand, 6404465 - 6404628
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| |||||||||  |||  ||||||||||||| ||||||||||||||||||||    
T  6404465 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagagctctggccctggaacgccttgtcgttcaaagcggtggaacact 6404564  T
Q  226 -agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
      |||||||||||||||| | ||||||||||||||||||||| |    ||||||||||||||||    
T  6404565 ctgttgttcaaagcggtgattagcggtgaggacttatgtccttaaatgaatgctttaaccattc 6404628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 90 - 333
Target Start/End: Original strand, 22232569 - 22232813
Alignment:
Q  90 ggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcgg 188  Q
    ||||||||| |||||||  | ||||| ||||| ||  |||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||| |||   |    
T  22232569 ggagtcgtaagtcatatgaaaacatatgcatt-gttaagttgtatgtagatatacacaagtgggtcagttgcataagcatataaagcgggagggctcttg 22232667  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccatt 287  Q
    |  |||||| |||||| ||||||||||||||||||| | |||||||||||||||||| |||||| | ||||||||||||||    |||||| ||||||||    
T  22232668 ccctggaacaccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtaaagacttatgtcctgaaatgaatgctataaccatt 22232767  T
Q  288 cga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    | |  ||||| | |||   |||||||| |||||||||||||||||||    
T  22232768 caattagcggtgagggctccggccctg-aatatggtaccacatgcat 22232813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 28371393 - 28371653
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||||||||||||||||||  | || |||||||||||||| ||| |||  | ||||   ||||||||||||| |||||||||||||||||||    
T  28371393 gagttgtatgtagatatacacaagtggagtcgttgcataagcataaaaatggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacac 28371492  T
Q  225 ta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat----gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    || |||||||||||||||||| |   | ||||||| ||||||||||     | |||||||||||||||| | | ||| | |||   |||| |||  ||||    
T  28371493 tatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaaagaatgctttaaccattctataacggtgagggcttcggctctg--atat 28371588  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  28371589 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 28371653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 38145722 - 38145980
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||  | |  ||||||||||||||  | |||  | ||||   ||||||||||||| ||||||||||||||||||||    
T  38145722 gagttgtatgtagatatacacaagtggagtcggtgcataagcataaaatggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacact 38145821  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | | ||| | |||   |||| |||  ||||||    
T  38145822 atgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggcttcggctctg--atatgg 38145917  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  38145918 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 38145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 18409184 - 18409279
Alignment:
Q  306 cggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  18409184 cggccctgaa-tatggtaccacgtgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgaaattgcatgagtcgttgttgttggttgaat 18409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 42960289 - 42960031
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||  | |  ||||||||||||||  | |||  | ||||   ||||| ||||||| ||||||||||||||||||||    
T  42960289 gagttgtatgtagatatacacaagtggagtcggtgcataagcataaaatggtgaggacctcggtcctggaatgccttgtcgttcaaagcggtggaacact 42960190  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataa---tgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | |||||||||||||||||| |  ||  |||||| |||||||||| | ||   |||||||||||||| | | ||| | |||   |||| ||||  |||||    
T  42960189 atgttgttcaaagcggtgttaatggg--aggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggcttcggctctga--tatgg 42960094  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  42960093 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 42960031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 22336316 - 22336056
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  | ||||   ||||||||||||| ||||||| || |||||||    
T  22336316 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacctcggtcctggaacgccttgtcgttcaaaacgatggaaca 22336217  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  22336216 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 22336120  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  22336119 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 22336056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 18408968 - 18409081
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||| || || |||| |||  | ||||||||||| ||||||||||||| ||| |    
T  18408968 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcggaagggctttggccctagaacgccttgtcgttcaaagcggtgaaactc 18409067  T
Q  225 tagttgttcaaagc 238  Q
    | ||||||||||||    
T  18409068 ttgttgttcaaagc 18409081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 21829712 - 21829622
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  ||| |||||||||||||| |||||||||||    
T  21829712 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccttggaacgccttgtcgttcaaagcgg 21829622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 20843381 - 20843263
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || | | ||||||||||| |||| ||||| |||   || |||||||    
T  20843381 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcaattgcataagcatataaagcgggagggctcttgccttggaac 20843282  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  20843281 gccttgtcgttcaaagcgg 20843263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 22339854 - 22339594
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  | ||||   |||||| |||||| ||||||| || |||||||    
T  22339854 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacctcggtcctggaacaccttgtcgttcaaaacgatggaaca 22339755  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  22339754 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 22339658  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||| ||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  22339657 gtacgacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 22339594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 22749963 - 22749702
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagag--cttcggctttggaacgccttgttgttcaaagcggtggaac 222  Q
    ||||||||||||||||| ||||||||| || ||| ||||||||||||||   |  |||  ||||||   ||||||||||||| ||||||| || |||| |    
T  22749963 gagttgtatgtagatatccacaagtggagtcagttgcataagcataaaaaacgatgaggacttcggtcctggaacgccttgtcgttcaaaacgatggagc 22749864  T
Q  223 acta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    |||| |||||||||| || |||| | || ||| |||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  |||    
T  22749863 actatgttgttcaaaacgatgttaa-cgatgaagactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tat 22749767  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  22749766 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 22749702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 19801961 - 19802109
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    ||||||||||||||||||||||||||  ||||||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||| ||||| || |    
T  19801961 agcggtgaggacttatgtcctgatga--atgctttaaccattcaaaagcggtgagggcttcggtcctgt--tttggtaccacatgcataattgcatttat 19802056  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  19802057 tgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 19802109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 19236056 - 19235811
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  19236056 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 19235957  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || ||| |||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  19235956 ctatgttgttcaaaacgatgttaa-cgatgatgactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgt--tatg 19235860  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  19235859 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 19235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 22466935 - 22466690
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| |||||||  | |||||||    
T  22466935 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaatgatggaaca 22466836  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| ||||||||||   | |||||||||||||||| | | ||  | |||   |||| |||   ||||    
T  22466835 ctatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctg--ttatg 22466739  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| |  ||||||||| || |||||||    
T  22466738 gtaccacatgcatagttgcatttgttgatgagtcttagtggagttgtca 22466690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 27635844 - 27635934
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||| | ||| ||||  ||  ||||||||||| | |||||||||||    
T  27635844 gagttgtatgtagatatacacaagtgagtcagtcgcatatgcataaaagcgagagggcttttgccctggaacgccttatcgttcaaagcgg 27635934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 20819339 - 20819173
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  20819339 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 20819240  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  20819239 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 20819173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 20826439 - 20826273
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  20826439 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 20826340  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  20826339 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 20826273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 24668923 - 24669050
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| |||||||||| ||||| || |||    
T  24668923 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagcataaaagcgggagggcctcg 24669021  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |   |||||| |||||| |||||||||||    
T  24669022 gtcctggaacaccttgtcgttcaaagcgg 24669050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 24738692 - 24738819
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| |||||||||| ||||| || |||    
T  24738692 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagcataaaagcgggagggcctcg 24738790  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |   |||||| |||||| |||||||||||    
T  24738791 gtcctggaacaccttgtcgttcaaagcgg 24738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 24751461 - 24751588
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| |||| |||||||||| ||||| || |||    
T  24751461 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcatgagcataaaagcgggagggcctcg 24751559  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |   |||||| |||||| |||||||||||    
T  24751560 gtcctggaacaccttgtcgttcaaagcgg 24751588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 340
Target Start/End: Original strand, 27635969 - 27636061
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc-gacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||||||||  ||||||||||||||||  ||||||| | |||   |||||||| |||||||||||||||||||| |||||    
T  27635969 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaacagcggtgagggcttcggccctg-aatatggtaccacatgcatatttgca 27636061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 427455 - 427337
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || |||  |||||||||| |||| ||||| |||   ||  | ||||    
T  427455 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagtttcataagcatataaagcgggagggctcttgccctcgaac 427356  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  427355 gccttgtcgttcaaagcgg 427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 402
Target Start/End: Original strand, 21574219 - 21574272
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||||||||||| |||| |||||||||||||||| ||| |||||||||||    
T  21574219 ggagtcttagaggtgtagtcatgtcattgcatgagtcgctgtcgttggttgaat 21574272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 10035094 - 10035042
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  10035094 ggagtcttagtggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 10035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 20772126 - 20772078
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  20772126 gagttgtatgtagatatacacaagtggagtcagtcgcataagcataaaa 20772078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 21494931 - 21494871
Alignment:
Q  332 atagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||||||    
T  21494931 atagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 21494871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 21888534 - 21888474
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| ||||||||||  ||||||||| ||  |||||||||||||||||||||||||||    
T  21888534 attgtcgaggagtcttagcagtgttgtcaagtagttgcatgagtcgttgttgttggttgaa 21888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 19362681 - 19362533
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    |||||||||||||||||||||||||  |||||||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||  ||||| || |    
T  19362681 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaagcggtgagggcttcggtcctg--ttttggtaccacatgcatgattgcatttat 19362586  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| ||||| |||| |||| |||||||||  |||||||||||||    
T  19362585 tgaggggtcttagtggtgtcgtcatgtca-tgcatgagtgtttgttgttggttg 19362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 24751648 - 24751714
Alignment:
Q  273 aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||| ||||||| | |||  ||||||||| |||||||||||||||||||| |||||    
T  24751648 aatgctttaaccattctacagcggtgagggctacggccctg-aatatggtaccacatgcatatttgca 24751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 25013572 - 25013521
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  25013572 gagtcttagcggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 25013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 22460311 - 22460066
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| | |||||||||||||| || ||| ||||||||||||||  |  |||  |||||| | |||||||| |||| ||||||| || |||||||    
T  22460311 gagttgtatgcatatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggttctggaacgctttgtcgttcaaaacgatggaaca 22460212  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| ||| |||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | |   | |||   |||| |||   ||||    
T  22460211 ctatgtttttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacaatgagggcttcggctctgt--tatg 22460115  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||||||||||||||||| |||| | |||||||||| || |||||||    
T  22460114 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 22460066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 24617894 - 24617951
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    |||||||| |||||| |||||||||| |||||||||| ||| ||||||||||| ||||    
T  24617894 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtcattgt 24617951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 24714125 - 24714182
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    |||||||| |||||| |||||||||| |||||||||| ||| ||||||||||| ||||    
T  24714125 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtcattgt 24714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 24747153 - 24747210
Alignment:
Q  333 tagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgt 390  Q
    |||||||| |||||| |||||||||| |||||||||| ||| ||||||||||| ||||    
T  24747153 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtcattgt 24747210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 20780901 - 20780853
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  20780901 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaa 20780853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 23076436 - 23076515
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  23076436 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 23076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 23081884 - 23081963
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  23081884 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 23081963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23561550 - 23561602
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||||| ||| ||||| ||  ||||||||||||||||||||||||||    
T  23561550 gtcatatacatatatatgcatttgtcaagttgtatgtagatatacacaagtgg 23561602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 24057614 - 24057535
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  24057614 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 24057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 37599254 - 37599302
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  37599254 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaa 37599302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 37599454 - 37599521
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||||||| |||| | | |||||||| || ||||||| ||| |||||||||||    
T  37599454 tatggtaccacatgcatagttgcatttgttgagaagtcttagtggagttgtcatgtc-ttgcatgagtc 37599521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 17023086 - 17023137
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||  |||||||||||||||||||||||||||||||    
T  17023086 gagtcgtagtggagttgtcgtgtcattgcatgagtcgttgttgttggttgaa 17023137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 24669110 - 24669176
Alignment:
Q  273 aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||| ||||||| | |||  ||| ||||||| |||||||||||||||||| |||||    
T  24669110 aatgctttaaccattctacagcggtgagggctacgaccctgaa-tatggtaccacatgcatatttgca 24669176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 24738879 - 24738945
Alignment:
Q  273 aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||| ||||||| | |||  ||| ||||||| |||||||||||||||||| |||||    
T  24738879 aatgctttaaccattctacagcggtgagggctacgaccctgaa-tatggtaccacatgcatatttgca 24738945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28890519 - 28890588
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28890519 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28897223 - 28897292
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28897223 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28897292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28910423 - 28910492
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28910423 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28910492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28925691 - 28925760
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28925691 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28925760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28932114 - 28932183
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28932114 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28932183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28933618 - 28933687
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28933618 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 28946818 - 28946887
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgt 387  Q
    |||||||||||||||||| ||||| |||| | ||||||||||  | ||||||| ||| |||||||||||||    
T  28946818 tatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtc-ttgcatgagtcgt 28946887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 15194241 - 15194282
Alignment:
Q  360 ggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| ||  |||||||||||||||||||||||||||    
T  15194241 ggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 15194282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 18818885 - 18818836
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    ||||| |||| |||||||||| ||  ||||||||||||||||||||||||    
T  18818885 ggagttttagtggtgttgtcatgtagttgcatgagtcgttgttgttggtt 18818836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 18408795 - 18408843
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattatacatttt 67  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||    
T  18408795 gttgaatgaacttgatgtattagtatgattgttattaattatacttttt 18408843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 26650416 - 26650339
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||||  ||| ||| | | |||||||||| |||||||||| |||| |||||||||| |||||||||||||    
T  26650416 tggtaccacatgcatatctgc-attattgaggagtcttagtggtgttgtcatgtca-tgcatgagtc-ttgttgttggttg 26650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 26922001 - 26921924
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||||  ||| ||| | | |||||||||| |||||||||| |||| |||||||||| |||||||||||||    
T  26922001 tggtaccacatgcatatctgc-attattgaggagtcttagtggtgttgtcatgtca-tgcatgagtc-ttgttgttggttg 26921924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 28896999 - 28897047
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  28896999 gagttgtatgtagatatacataagtggagtcagttgcataagcataaaa 28897047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 28910247 - 28910295
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  28910247 gagttgtatgtagatatacataagtggagtcagttgcataagcataaaa 28910295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 28931939 - 28931987
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  28931939 gagttgtatgtagatatacataagtggagtcagttgcataagcataaaa 28931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 28933442 - 28933490
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  28933442 gagttgtatgtagatatacataagtggagtcagttgcataagcataaaa 28933490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 28946642 - 28946690
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||    
T  28946642 gagttgtatgtagatatacataagtggagtcagttgcataagcataaaa 28946690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 37566052 - 37565973
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| |||||  | | | |||||||||| |||||| ||| |||| |||||||||| | |||||||||||    
T  37566052 tggtaccacatgcataattgcatattttgaggagtcttagtggtgttatcatgtca-tgcatgagtcttagttgttggttg 37565973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 39609017 - 39609096
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || |   || ||||||| ||||| |||| ||||| ||||||||| |||||||||||||    
T  39609017 tggtaccacatgcataattgcatttattaaggggtcttagtggtgtcgtcatgtcat-gcatgagtctttgttgttggttg 39609096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 181; Significance: 1e-97; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 103 - 402
Target Start/End: Original strand, 41564 - 41862
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgcctt 202  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  41564 atatatatatatatgcattagttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgcctt 41663  T
Q  203 gttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgg 301  Q
    || ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||   ||||| | ||    
T  41664 gtcgttaaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattcattagcgg-gagg 41762  T
Q  302 gtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |   |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  41763 gcttcggccctg-aatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcattacatgagtagttgttgttggttgaa 41861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 41413 - 41503
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatg 90  Q
    |||||||||| || ||  ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  41413 caagtgaaaatatattatgttgaatgaacttgatgtattagtatgattgatattaattatacatttttctgatgttggattggttgtgatg 41503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 100 - 411
Target Start/End: Complemental strand, 29979 - 29671
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||| |||| ||||||||    
T  29979 gtcatatacatatatatgcattggttgagttgtatgtagatatacacaagtgggt-agttgtctaagcataaaagtgggagagctttggctctggaacgc 29881  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgt 299  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||    
T  29880 cttgtcgttcaaagcggtggaacacttgttgttcaaagtggtgttgagcggtgaggacttatgtcctgatgagaatgctttaaccattcgacaacggtgt 29781  T
Q  300 gggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||| ||||||||| | |||||||||||||||||||||||| || | | ||||||||||||| | ||||| |||||| ||||||| ||| |||||| |||    
T  29780 gggttacggccctg-attatggtaccacatgcatagttgcatttattgaggagtcttagagg-ggtgtcatgtcattacatgagttgtttttgttgattg 29683  T
Q  400 aatcgttatatt 411  Q
    ||| | ||||||    
T  29682 aattgctatatt 29671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 30090 - 30044
Alignment:
Q  28 acttgatgtattagtatgattgacattaattatacattttctgatgt 74  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||    
T  30090 acttaatgtattagtatgattgatagtaattatacattttctgatgt 30044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 119 - 384
Target Start/End: Complemental strand, 2779 - 2516
Alignment:
Q  119 attagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||| |||||||||||||||||||||| || || |||| |||||||||| |||||||||||||||||||| | ||||||||||| |||||||||||||    
T  2779 attagttgagttgtatgtagatatacacaggttgggtagttgcataagcatcaaagtgggagagcttcggctctagaacgccttgtcgttcaaagcggtg 2680  T
Q  219 gaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaata 318  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||    
T  2679 gaacaccagttgttcaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-atta 2581  T
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    |||||||||||||||||||||| || ||| |||||||||| || | ||||| |||||| |||||||    
T  2580 tggtaccacatgcatagttgcatttatcgaggagtcttagtgg-ggtgtcatgtcatttcatgagt 2516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 128 - 411
Target Start/End: Original strand, 102900 - 103183
Alignment:
Q  128 gttgtatgtagatatacacaagtgggtta-gtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||| ||||||| |||||| |  || ||||||||||||||| ||||||||||||||  |||||||  |||| |||||||||||||||||||||    
T  102900 gttgtatgtaggtatacaccagtggggtctgttgcataagcataaaagcgggagagcttcggccctggaacgagttgtcgttcaaagcggtggaacacta 102999  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    |||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||| ||  | | |||   |||||||| ||||||||||||    
T  103000 gttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgaaagaagtgagggctccggccctg-aatatggtacca 103098  T
Q  327 catgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  103099 catgcatagttgcaattatcgaggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaattgttatatt 103183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 177860 - 177809
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || |||||||  ||||||||||||||||||||||||||||||    
T  177860 gagtcgtagtggagttgtcatatcattgcatgagtcgttgttgttggttgaa 177809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 156; Significance: 1e-82; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 128 - 402
Target Start/End: Complemental strand, 115941 - 115667
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||| ||||| ||  || ||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||||||||||||      
T  115941 gttgtatgtagatatacaccagtggagtctgttgcataagcataaaagcgggagggcttcgaccctggaacgccttgtcgttcaaagcggtggaacaccc 115842  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    |||||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||| || || | |||   ||||||| |||||||||||||    
T  115841 gttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaaccattcgatagtggtgagggctccggccct-aaatatggtacca 115743  T
Q  327 catgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  115742 catgcatagttgcaattgtcgaggagtcttagaggtgttgtcatgtcattgcatgagtctttgttgttggttgaat 115667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 327007 - 326816
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || ||||||||||||||||||||||||| || |||||| ||||||||| ||||||||||| ||||||||  | ||||    
T  327007 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaaggggagttagttgcataagcacaaaagtgggagggcttcggccctagaac 326908  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  326907 gccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 326816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 321298 - 321107
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||| | ||||||| ||||| || ||||||||||||||||||||||||| || ||| || ||||||||| |||| |||||| ||||||||  ||||||    
T  321298 gtcataaaaatacatatgcatttgttggagttgtatgtagatatacacaaggggagtttgttgcataagcacaaaaatgggagggcttcggccctggaac 321199  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  321198 gccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattc 321107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 129858 - 129932
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||| |||||    
T  129858 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgtcgttgt 129932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 129659 - 129751
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||| ||||||||||||| |||||||||||    
T  129659 gagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgctctggaacgccttgtcgttcaaagcgg 129751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 383372 - 383332
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  383372 gtgttgtcatgtcattgcataagtcgttgttgttggttgaa 383332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 131 - 411
Target Start/End: Original strand, 16914 - 17193
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  16914 gtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcagtggaacactagttg 17013  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
    |||||| ||| ||| |||||||||| ||||||||||||  || ||||||||||||||||   ||||| | |||   |||||||| |||||||||||||||    
T  17014 ttcaaaacggagtttagcggtgaggccttatgtcctgaaaatgaatgctttaaccattcattagcgg-gagggcttcggccctg-aatatggtaccacat 17111  T
Q  330 gcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| | ||||||    
T  17112 gcatagttgcatttgtcgaggagtcttagaggtgttgtcaagtcattacatgagtcgtggttgttggtcgaattgctatatt 17193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 15072 - 15162
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatg 90  Q
    |||||||||| || ||  ||||||||| |||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||| ||||    
T  15072 caagtgaaaatatattatgttgaatgaacttgatgtattagtatgattgttattaattgtacatttttctgatgttggattggttgtgatg 15162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 15763 - 15853
Alignment:
Q  2 caagtgaaaagatgttgcgttgaatgactt-gatgtattagtatgattgacattaattataca-ttttctgatgttggattggttgagatg 90  Q
    |||||||||| || ||  ||||||||| || ||||||||||||||||||  ||||||| |||| |||||||||||||||||||||| ||||    
T  15763 caagtgaaaatatattatgttgaatgaatttgatgtattagtatgattgttattaattgtacatttttctgatgttggattggttgtgatg 15853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 145; Significance: 4e-76; HSPs: 7)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 121 - 384
Target Start/End: Original strand, 12842 - 13104
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagt-gggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgg 219  Q
    |||| |||||||||||||||||||||| || |||||||| |||||||||| |||||||||||| ||||||| | ||||||||||| ||||||||||||||    
T  12842 tagttgagttgtatgtagatatacacaggttgggttagttgcataagcatcaaagtgggagagtttcggctctagaacgccttgtcgttcaaagcggtgg 12941  T
Q  220 aacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatat 319  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||||||||| |||| | |||    
T  12942 aacacaagttgttcaaagcggtgtagagcggtgaggacttaggtcctgataagaatgctttaaccattcgacagcggtgtgggtcacggacctg-attat 13040  T
Q  320 ggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagt 384  Q
    ||||||||||||||||||||| || ||| ||||| |||| || | ||||| |||||| |||||||    
T  13041 ggtaccacatgcatagttgcatttatcgaggagtattag-ggggatgtcatgtcatttcatgagt 13104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 130 - 333
Target Start/End: Original strand, 63168 - 63370
Alignment:
Q  130 tgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||| ||||||||    
T  63168 tgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgccttatcgttcaaagtggtggagcactagtt 63267  T
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    | |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||||    
T  63268 gctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtaccaca 63365  T
Q  329 tgcat 333  Q
    |||||    
T  63366 tgcat 63370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 126 - 290
Target Start/End: Original strand, 124441 - 124606
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||| ||||| ||||| |   ||||||||||||| |||||||| |||||||||||    
T  124441 gagttgtatgtagatataaacaagtgggtcagttgcataagcataaaagcgggagggcttctgacctggaacgccttgtcgttcaaagtggtggaacact 124540  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  124541 agttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 124606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 385
Target Start/End: Complemental strand, 110402 - 110142
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  110402 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 110303  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  110302 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 110206  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  110205 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 35529 - 35487
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  35529 gagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 35487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 24659 - 24617
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||||||||  ||||||||||||||||||||||    
T  24659 gagtcttagtggtgttgtcgtgtcattgcatgagtcgttgttg 24617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 118077 - 118045
Alignment:
Q  360 ggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||| ||||||||||||||||||||||    
T  118077 ggtgttgtcatgtcattgcatgagtcgttgttg 118045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 144; Significance: 1e-75; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 121 - 340
Target Start/End: Complemental strand, 110969 - 110751
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| |||||| ||| || ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  110969 tagttgagttgtatgtagatatacacaggttgggtagttgcataaacatcaa-gtgggagagcttcggctctggaacgccttgtcgttcaaagcggtgga 110871  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  110870 acactagttgttcaatgcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatg 110771  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  110770 gtaccacatgcataattgca 110751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 116853 - 116786
Alignment:
Q  273 aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||    
T  116853 aatgctttaaccattcgacaacggtgtgggtcacggccctgaattatggtaccacatgcataattgca 116786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 92102 - 92361
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  92102 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 92201  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat-gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||  | |||||||||||||||| | | ||  | | |   |||| |||  ||||||    
T  92202 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaagaatgctttaaccattctataacgatgagagcttcggctctg--atatgg 92298  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  92299 taccacatgcataattgcatttgttgaggagtcttagaagagttgtcatgtc-ttgcatgagtc 92361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 97828 - 98087
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  97828 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 97927  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat-gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||  | |||||||||||||||| | | ||  | | |   |||| |||  ||||||    
T  97928 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaagaatgctttaaccattctataacgatgagagcttcggctctg--atatgg 98024  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||||||||||||| ||||| |||| | ||||||||||| | ||||||| ||| |||||||||||    
T  98025 taccacatgcataattgcatttgttgaggagtcttagaagagttgtcatgtc-ttgcatgagtc 98087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 141; Significance: 9e-74; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Complemental strand, 38616 - 38394
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  38616 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 38518  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  38517 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 38419  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  38418 ttatggtaccacatgcatatttgca 38394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 46728 - 46864
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||| ||||| ||||||| |||||||||||||||||||     
T  46728 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctatggctctggaatgccttgtcgttcaaagcggtggaacact 46827  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttat 261  Q
    | |||||||||| ||||| | ||||||||||||||||    
T  46828 ttgttgttcaaatcggtgattagcggtgaggacttat 46864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 51001 - 51137
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||| ||||| ||||||| |||||||||||||||||||     
T  51001 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctatggctctggaatgccttgtcgttcaaagcggtggaacact 51100  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttat 261  Q
    | |||||||||| ||||| | ||||||||||||||||    
T  51101 ttgttgttcaaatcggtgattagcggtgaggacttat 51137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 141; Significance: 9e-74; HSPs: 5)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 30107 - 30329
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| ||||| |||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  30107 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcata-gcatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 30205  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  30206 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 30304  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  30305 ttatggtaccacatgcatatttgca 30329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 35508 - 35730
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  35508 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 35606  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  35607 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 35705  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  35706 ttatggtaccacatgcatatttgca 35730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 100 - 327
Target Start/End: Original strand, 51644 - 51872
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  51644 gtcatatacatatatatgcatttggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcgggagagcttcggctttggaacg 51743  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggc 297  Q
    ||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||  || |||||||||||||||| | |||||     
T  51744 ccttgtcattcaaagcggtggaacagtagttgttcaaagcggtgtttagcggtgagggcttatgtcctgaaaatgaatgctttaaccattctatagcggt 51843  T
Q  298 gtgggtcacggccctgaaatatggtaccac 327  Q
    | ||| | ||||||| || |||||||||||    
T  51844 gagggcctcggccct-aattatggtaccac 51872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 30353 - 30401
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  30353 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 30401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 35754 - 35802
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  35754 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 35802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 141; Significance: 9e-74; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 46941 - 47163
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  46941 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 47039  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  47040 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 47138  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  47139 ttatggtaccacatgcatatttgca 47163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 126 - 340
Target Start/End: Original strand, 52355 - 52568
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  52355 gagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggaacact 52453  T
Q  226 agttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtac 324  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  52454 agttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-attatggtac 52552  T
Q  325 cacatgcatagttgca 340  Q
    |||||||||| |||||    
T  52553 cacatgcatatttgca 52568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 65215 - 65086
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagctt 185  Q
    ||||||| ||| |||||||| | | ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||     
T  65215 atggagttgtaagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctc 65117  T
Q  186 cggctttggaacgccttgttgttcaaagcgg 216  Q
      ||  ||||||||||||| |||||||||||    
T  65116 ttgccctggaacgccttgtcgttcaaagcgg 65086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 64938 - 64888
Alignment:
Q  352 gtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||| ||||    
T  64938 gtcttagaggtgtcgtcatgtcattgcatgagtcgttgtcgttggtcgaat 64888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 92888 - 92930
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  92888 gagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 92930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 47187 - 47234
Alignment:
Q  352 gtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| ||| |||||||||||| ||||||||||||    
T  47187 gtcttagcggtgttgtcatgtccttgcatgagtcggtgttgttggttg 47234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 141; Significance: 9e-74; HSPs: 11)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 174523 - 174745
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||| || |||||||||||||||||||||| || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||| ||    
T  174523 gcatttgttgagttgtatgtagatatacacaggttgggtagttgcataa-catcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtgg 174621  T
Q  217 tggaacactagttgttcaaa-gcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaa 315  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  174622 tggaacactagttgttcaaaagcggtgttgagcggtgaggacttaggtcctgatgagaatgctttaaccattcgacagcggtgtgggtcacggccctg-a 174720  T
Q  316 atatggtaccacatgcatagttgca 340  Q
     |||||||||||||||||| |||||    
T  174721 ttatggtaccacatgcatatttgca 174745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 126 - 338
Target Start/End: Complemental strand, 152567 - 152356
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||    
T  152567 gagttgtatgtagatatacacaagtgggttagttgcataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcact 152468  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtac 324  Q
    ||||| |||||| |||||| || ||||||||||||||||||||  || | |||||||||||||| |||| |  | |||  |||| |||| | ||||||||    
T  152467 agttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgattgctttaaccattctacagtgttgagggctacggtcctg-attatggtac 152370  T
Q  325 cacatgcatagttg 338  Q
    ||||||||| ||||    
T  152369 cacatgcatggttg 152356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 258700 - 258491
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||| | ||  ||||||||||||| |||||||||||||||||||     
T  258700 agttgtatgtagatatacacaagtggagttagttgcataagcacaaaagtgggagggctcctgccctggaacgccttgtcgttcaaagcggtggaacact 258601  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||||| |||||||||||||||||||||| |  | ||||||||||||||||||  ||||| | |||   |||||||| ||||||||    
T  258600 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aatatggt 258502  T
Q  323 accacatgcat 333  Q
    |||||||||||    
T  258501 accacatgcat 258491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 197409 - 197618
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||| |||||||||||||||| || ||| ||||||||| ||||||||||| |||  |||  |||||| |||||| ||||||||||||||||||||    
T  197409 agttgtatgaagatatacacaagtggagtcagttgcataagcacaaaagtgggagggctctggccctggaacaccttgtcgttcaaagcggtggaacact 197508  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
      |||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||| |  ||||| | |||   |||||||| ||||||||    
T  197509 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattcaattagcggtgagggctccggccctg-aatatggt 197607  T
Q  323 accacatgcat 333  Q
    |||||||||||    
T  197608 accacatgcat 197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 252094 - 252004
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  252094 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 154338 - 154248
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| |||||  ||  |||  ||||||||||||| |||||||||||    
T  154338 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggaggactatggccctggaacgccttgtcgttcaaagcgg 154248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 147213 - 147127
Alignment:
Q  131 gtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||| || | | ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  147213 gtatgtagatatacacaagtggagtcatttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 147127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 75342 - 75251
Alignment:
Q  127 agttgtatgtagatatacacaagtg-ggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||  || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  75342 agttgtatgtagatatacacaagtgcagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 75251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 21986 - 22026
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||||| |||||||||| |||||||||||||| |||||    
T  21986 gtgttgtcatgtcattgcataagtcgttgttgttgtttgaa 22026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 56933 - 57012
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||||||||| || | | |||||| |||||| ||| |||||||||  ||  ||||||||||| |||||||||||||    
T  56933 tggtaccacatgcattgtcgta-ttgtcgaggagtcgtagcggtgttgtcgagttgttgcatgagtctttgttgttggttg 57012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 174769 - 174817
Alignment:
Q  352 gtcttagaggtgttgtcacgtcatt-gcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  174769 gtcttagcggtgttgtcatgtcatttgcatgagtcggtgttgttggttg 174817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 121 - 340
Target Start/End: Original strand, 9598 - 9816
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| ||||||  | | ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9598 tagttgagttgtatgtagatatacacaggttgggtagttgcataaaaa-acaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtgga 9696  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||  ||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  9697 acactagttgttcaaagcggtgtggagcggtgaggacttaggtcctattgagaatgctttaaccattcgacagcggtgtgggtcacggccctgaattatg 9796  T
Q  321 gtaccacatgcatagttgca 340  Q
    |||||||||||||| |||||    
T  9797 gtaccacatgcataattgca 9816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 89 - 333
Target Start/End: Complemental strand, 5392 - 5148
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcgg 188  Q
    |||||| ||| |||||||||||| ||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  5392 tggagtggtaagtcatatacatatatatgcattggttgagttgtatgtagatatacacaagagggttagttgcataagcataaaagcgggagagcttcgg 5293  T
Q  189 ctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccatt 287  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || |||||||||||||||    
T  5292 ctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtatagcggtgaggacttatgtcctgaaaatgaatgctttaaccatt 5193  T
Q  288 cgacagcggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    | ||||||| | |||    |||||| || |||||||||||||||||    
T  5192 ctacagcggtgagggctttggccct-aattatggtaccacatgcat 5148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 136; Significance: 8e-71; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 129 - 340
Target Start/End: Original strand, 174535 - 174746
Alignment:
Q  129 ttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagt 228  Q
    ||||||||||| ||||| | || || |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  174535 ttgtatgtagagatacaaaggttgggtagttgcataaacatcaaagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacactagt 174634  T
Q  229 tgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccaca 328  Q
    |||| |||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  174635 tgttaaaagcggtgtggagcggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggccaagaattatggtaccaca 174734  T
Q  329 tgcatagttgca 340  Q
    ||||||||||||    
T  174735 tgcatagttgca 174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 172 - 334
Target Start/End: Complemental strand, 489288 - 489126
Alignment:
Q  172 aagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatga 271  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||    
T  489288 aagtgggagagcttcggctctggaacgccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttga 489189  T
Q  272 taatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcata 334  Q
     ||||||||||||||||||||| |  |||||||| ||||||||| ||||||||||||||||||    
T  489188 gaatgctttaaccattcgacagtgttgtgggtcatggccctgaattatggtaccacatgcata 489126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 96055 - 95894
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||| |||  | ||||||||||| |||||||||||||||||||     
T  96055 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagtgggagggctttggcccttgaacgccttgtcgttcaaagcggtggaacact 95956  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccatt 287  Q
    | |||||||||||||||| | |||||||||||||||||||||| |||  |||||||||||||||    
T  95955 ttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaatg--aatgctttaaccatt 95894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 369
Target Start/End: Original strand, 493927 - 494170
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||||  | |  ||||||||||||||  | |||  | ||||   ||||||||||||| ||||||||||||||||||||    
T  493927 gagttgtatgtagatatacacaagtggagtcggtgcataagcataaaatggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacact 494026  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatgg 321  Q
    | |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | | ||| | ||| | ||||||||  ||||||    
T  494027 atgttgttcaaagcggtgttaa--tgggaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggccccggccctg--atatgg 494122  T
Q  322 taccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||||||||| |||| | |||||||||| || |||||||    
T  494123 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 494170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 524647 - 524575
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||| ||| |||| | |||||||||| ||||| |||| |||||| ||||||||||||||||||||||||    
T  524647 tgcatagtcgcatttgttgaggagtcttagtggtgtcgtcatgtcatttcatgagtcgttgttgttggttgaa 524575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 399
Target Start/End: Complemental strand, 179086 - 178938
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgt 345  Q
    |||||||||||||||||||||||||  |||||||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||  ||||| || |    
T  179086 agcggtgaggacttatgtcctgatg--aatgctttaaccattcaaaagcggtgagggcttcggtcctg--ttttggtaccacatgcatgattgcatttat 178991  T
Q  346 cggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
     | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  178990 tgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 178938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 131 - 411
Target Start/End: Original strand, 392 - 671
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  392 gtatgtagatatacacaagtgggtcagttgcataagcattaaagtgggagagcttcggctctggaacgccttgtcgttcaaatcggtggaacactagttg 491  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacat 329  Q
    |||||||||| ||| |||| ||||||||||||||||||  || ||||||||||||||||   ||||| | |||   |||||||| |||||||||||||||    
T  492 ttcaaagcggagtttagcgatgaggacttatgtcctgaaaatgaatgctttaaccattcattagcgg-gagggcttcggccctg-aatatggtaccacat 589  T
Q  330 gcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||||||||||| ||| || || |||||||||||||||||| ||| || ||||||| || ||| ||||| |||| | ||||||    
T  590 gcatagttgcatttgccgaggggtcttagaggtgttgtcaagtcgttacatgagttgtggttcttggtcgaattgctatatt 671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 128 - 295
Target Start/End: Complemental strand, 17682 - 17514
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  17682 gttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcgggaaagcttcggctctggaacgccttgtcgttcaaagcggtggagcactag 17583  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcg 295  Q
    ||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||    
T  17582 ttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcg 17514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 14441 - 14673
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  14441 gtcatatacatatatatgcataggttgggttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgc 14540  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcg 298  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| |    
T  14541 cttgtcgttcaaagtggtggagcactagttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtg 14639  T
Q  299 tgggtcacggccctgaaatatggtaccacatgcat 333  Q
     |||  |||| |||| | |||||||||||||||||    
T  14640 agggctacggtcctg-attatggtaccacatgcat 14673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 296
Target Start/End: Original strand, 7186 - 7354
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||  ||| | |||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  7186 gttgtatgtagatatacacaagtgggacagttggataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 7285  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcgg 296  Q
    ||| |||||| ||| || || ||||||||||||||||||||  || |||||||||||||||| |||||||    
T  7286 ttgctcaaagtggtatt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcgg 7354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 114; Significance: 1e-57; HSPs: 6)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 192 - 411
Target Start/End: Original strand, 1116 - 1336
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
    |||||| | |||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||| |  | ||||||||||||||||||    
T  1116 tggaacactttgttgttcaaagcggtggaacactttgttgttcaaagtggtgtttagcggtgaggacttatgtcctaaaaagaatgctttaaccattcga 1215  T
Q  291 c-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttg 389  Q
      ||||| | |||   |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  1216 ttagcggtgagggctccggccctgaa-tatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgtcatgtcattgcatgagtcgttg 1314  T
Q  390 ttgttggttgaatcgttatatt 411  Q
    ||||||||||||| | ||||||    
T  1315 ttgttggttgaattgctatatt 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 192 - 411
Target Start/End: Original strand, 8052 - 8272
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
    |||||| | |||||||||||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||| |  | ||||||||||||||||||    
T  8052 tggaacactttgttgttcaaagcggtggaacactttgttgttcaaagtggtgtttagcggtgaggacttatgtcctaaaaagaatgctttaaccattcga 8151  T
Q  291 c-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttg 389  Q
      ||||| | |||   |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  8152 ttagcggtgagggctccggccctgaa-tatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgtcatgtcattgcatgagtcgttg 8250  T
Q  390 ttgttggttgaatcgttatatt 411  Q
    ||||||||||||| | ||||||    
T  8251 ttgttggttgaattgctatatt 8272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 991 - 1142
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggct 190  Q
    |||||||||||||||| | | ||| ||||| || |||| |||||||||||||||||||||| ||  || ||||||||||||||| ||||| ||||||||     
T  991 agtcgtatgtcatatatacatatatgcatt-gtcgagtggtatgtagatatacacaagtggagtcggttgcataagcataaaagcgggagggcttcggcc 1089  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
     ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  1090 ctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtg 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 7927 - 8078
Alignment:
Q  92 agtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggct 190  Q
    |||||||||||||||| | | ||| ||||| || |||| |||||||||||||||||||||| ||  || ||||||||||||||| ||||| ||||||||     
T  7927 agtcgtatgtcatatatacatatatgcatt-gtcgagtggtatgtagatatacacaagtggagtcggttgcataagcataaaagcgggagggcttcggcc 8025  T
Q  191 ttggaacgccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
     ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  8026 ctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtg 8078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 900 - 966
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggtt 84  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  900 gttgaatgaacttgatgtattagtatgattgttattaattatacatttttctgatgttggattggtt 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 7836 - 7902
Alignment:
Q  20 gttgaatga-cttgatgtattagtatgattgacattaattataca-ttttctgatgttggattggtt 84  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  7836 gttgaatgaacttgatgtattagtatgattgttattaattatacatttttctgatgttggattggtt 7902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 126 - 333
Target Start/End: Original strand, 6001 - 6208
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||||    
T  6001 gagttgtatgtagatatacataagtgggttagttacataagcataaaagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcact 6100  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtac 324  Q
    ||||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||    
T  6101 agttgctcaaagtggtgtttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtac 6199  T
Q  325 cacatgcat 333  Q
    |||||||||    
T  6200 cacatgcat 6208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 192 - 411
Target Start/End: Complemental strand, 2181 - 1960
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta--gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcg 289  Q
    |||||| | |||||||||| |||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||| |  | |||||||||||||||||    
T  2181 tggaacactttgttgttcacagcggtggaacactattgttgttcaaagtggtgtttagcggtgaggacttatgtcctaaaaagaatgctttaaccattcg 2082  T
Q  290 ac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgtt 388  Q
    |  ||||| | |||   |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2081 attagcggtgagggctccggccctgaa-tatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgtcatgtcattgcatgagtcgtt 1983  T
Q  389 gttgttggttgaatcgttatatt 411  Q
    |||||||||||||| | ||||||    
T  1982 gttgttggttgaattgctatatt 1960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 7482 - 7293
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||    
T  7482 gtcatatacatatatatgcattggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcgggagagcttcggctctggaacgc 7383  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||| ||||| |||||||||||||||| | |||||||||||||| || ||| ||||||||| ||||||  || ||||||||||||||||    
T  7382 cttgtcgttcatagcggtggaacactagatattcaaagcggtgtttagtggtaaggacttatatcctgaaaatgaatgctttaaccattc 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 100 - 268
Target Start/End: Original strand, 20462 - 20630
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgc 199  Q
    |||||||||||| ||| ||||  || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  20462 gtcatatacatatatatgcataggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagcttcggctctggaacgc 20561  T
Q  200 cttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    ||||| |||||||||||||||  |||||||| |||| |||||||| || ||||||||||||||||||||    
T  20562 cttgtcgttcaaagcggtggagtactagttgctcaacgcggtgtttagtggtgaggacttatgtcctga 20630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 156804 - 156901
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga 290  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||||||| |||||||| |  | ||||||||||||||||||    
T  156804 tggaacgccttgtcgttcaaagcggtggaacac--gttgttcaaagaggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcga 156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 153285 - 153365
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggag 180  Q
    |||||||| ||||||| |||||  ||||||||||||||||||||||||||||||| ||| ||| || ||| |||| |||||    
T  153285 gtcatataaatacatatgcattgttggagttgtatgtagatatacacaagtgggtcagttgcacaaacatgaaagcgggag 153365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 42135 - 41931
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||| ||||||    
T  42135 gttgtatgtagatatacacaagtgggtcagttgcataagcataaaagtgggagagtttcggctctggaacgccttgtcgttcaaagtggtggagcactag 42036  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||    
T  42035 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtacca 41938  T
Q  327 catgcat 333  Q
    |||||||    
T  41937 catgcat 41931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 47790 - 47881
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||  ||   ||  ||||||||||||| |||||||||||    
T  47790 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagtgggaggactctagccctggaacgccttgtcgttcaaagcgg 47881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 28096 - 27906
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||  ||||||| |||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||||  | |||||    
T  28096 gtcatatgaatacatatgcattgttggagttgtatgtagatatacaccagtggagttagttgcataagcataaaagcgggagggcttcggccctagaacg 27997  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||    
T  27996 ccttgtcgttcaaagcggtggaacactagttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaatgaatgctttaaccattc 27906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 56418 - 56623
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||||||||||||    
T  56418 gttgtatgtagatatacacaagagggtcagttgcataagcataaaagtgggagagattcggctctagaacgccttgtcgttcaaagtggtggaacactag 56517  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| ||||||||||||| || ||||||||||||||||||| |  | |||||||||||||||||||| ||| | |||  |||| |||| | ||||||||||    
T  56518 ttgctcaaagcggtgtttagtggtgaggacttatgtcctgaaaaagaatgctttaaccattcgacaacggtgagggctacggtcctg-attatggtacca 56616  T
Q  327 catgcat 333  Q
    |||||||    
T  56617 catgcat 56623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 47384 - 47589
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||||| ||||||    
T  47384 gttgtatgtagatatacacaagcgggtcagttgcataagcataaaagtgggagagtttcggctctagaacgccttgtcgttcaaagtggtggagcactag 47483  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| ||||||||||||| || ||||||||||||||||||| |  | |||||||||||||||||||| ||| | |||  |||| |||| | ||||||||||    
T  47484 ttgctcaaagcggtgtttagtggtgaggacttatgtcctgaaaaagaatgctttaaccattcgacaacggtgagggctacggtcctg-attatggtacca 47582  T
Q  327 catgcat 333  Q
    |||||||    
T  47583 catgcat 47589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 62804 - 63009
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||| | ||||||||||| |||||||| |||||| ||||||    
T  62804 gttgtatgtagatatacacaagcgggtcagttgcataagcataaaagtgggagagtttcggctctagaacgccttgtcgttcaaagtggtggagcactag 62903  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| ||||||||||||| || ||||||||||||||||||| |  | |||||||||||||||||||| ||| | |||  |||| |||| | ||||||||||    
T  62904 ttgctcaaagcggtgtttagtggtgaggacttatgtcctgaaaaagaatgctttaaccattcgacaacggtgagggctacggtcctg-attatggtacca 63002  T
Q  327 catgcat 333  Q
    |||||||    
T  63003 catgcat 63009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 411
Target Start/End: Original strand, 7778 - 8064
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||| |||| |||||  ||   |   ||||||||||||| ||||||||||||||||||||    
T  7778 agttgtatgtagatatacacaattgggtcagttgcataaacatataaagcgggaggtctcttgtcctggaacgccttgtcgttcaaagcggtggaacact 7877  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
      |||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||| |  ||| | | |||   |||||| | |||||||||    
T  7878 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaatgaatgctttaaccattcaattagcagtgagggctccggcccag-aatatggta 7976  T
Q  324 ccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaatcgttatatt 411  Q
    ||| ||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| || ||||||| | ||||||    
T  7977 ccatatgcatagttgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttttttgttgaattgctatatt 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 385
Target Start/End: Original strand, 14741 - 15025
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    ||||||||  |||||| ||||| || ||||||||||||||||||||||||||| || |||||||||| |||||||  || |||  | ||||   ||||||    
T  14741 gtcatataagtacatatgcatt-gttgagttgtatgtagatatacacaagtggagtcagtcgcataa-cataaaaacggtgaggacctcggtcctggaac 14838  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat---gataatgctttaaccattcgacag 293  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |   | ||||||| ||||||||||    | |||||||||||||||| | |     
T  14839 gccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaa--tgggaggactcatgtcctgatataaagaatgctttaaccattctataa 14936  T
Q  294 cggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    ||| | |||   ||||||||  ||||||||||||||||||||||||| |||| | ||||||||||||| || |||| |||| ||||||||||    
T  14937 cggtgagggcttcggccctg--atatggtaccacatgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtca-tgcatgagtc 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 6968 - 7039
Alignment:
Q  330 gcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  6968 gcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgatgttggttgaa 7039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 4978 - 5184
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac-ta 226  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||  ||||| ||||||| ||||||||||||||| ||| |     
T  4978 gttgtatgtagatatacacaagtgggttagttgcataagcataaaagcgggagggcttcggccctggaatgccttgtcgttcaaagcggtggagcacttt 5077  T
Q  227 gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacc 325  Q
    |||||||||||||||||| ||||||||||||| |||||||||  || |||||||||||||||| ||||||| | |||   |||||||| | |||||||||    
T  5078 gttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaatgaatgctttaaccattctacagcggtgagggcttcggccctg-attatggtacc 5176  T
Q  326 acatgcat 333  Q
    ||||||||    
T  5177 acatgcat 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 28008 - 27935
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||||||||| || ||| |||| | ||||||||||||||||||||| ||||||||||||||||| ||||    
T  28008 tggtaccacatgcattgtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgtcgttg 27935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 206 - 340
Target Start/End: Original strand, 4 - 138
Alignment:
Q  206 gttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtca 305  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| |||| |||    
T  4 gttcaaagcggtggaacactagttgttcaaagcggtgtggagcggtgaggacttaggtcctgttgataatgctttaaccattcgacagcggtgtggatca 103  T
Q  306 cggccctgaaatatggtaccacatgcatagttgca 340  Q
    |||||||| | |||||||||||||||||| |||||    
T  104 cggccctggattatggtaccacatgcatatttgca 138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 126 - 345
Target Start/End: Complemental strand, 3128 - 2907
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||| | |||||||||||||||||||     
T  3128 gagttgtatgtagatatacacaagtgggttagttgcataagcataaaagcgggagggcttcggctctggaacgccttatcgttcaaagcggtggaacact 3029  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | ||||||||||| |||||| |||||||| |||| |||||||| |  | ||||||||||||||||||  ||||| | |||   |||||||| || |||||    
T  3028 ttgttgttcaaagaggtgtttagcggtgatgactcatgtcctgaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctg-aacatggt 2930  T
Q  323 accacatgcatagttgcaattgt 345  Q
    |||||||||||| ||| ||||||    
T  2929 accacatgcatatttgtaattgt 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 1696 - 1904
Alignment:
Q  127 agttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||| |||   |   |||||| |||||| |||||||||||||||||||     
T  1696 agttgtatgtagatatacacaagtgggtcagttgcataagcatataaagcgggagggctcatgacctggaacaccttgtcgttcaaagcggtggaacact 1795  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | ||||||||||||| | || ||||||||||||||||||| |||    |||||||||||||||| |  ||||| | |||   |||||||| |||||||||    
T  1796 ttgttgttcaaagcgctttttagcggtgaggacttatgtcttgaaatgaatgctttaaccattcaattagcggtgagggcttcggccctg-aatatggta 1894  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  1895 ccacatgcat 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 15451 - 15641
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||               || |||||||| |||||| ||||||    
T  15451 gttgtatgtagatatacacgagtgggtcagttgcataagcataaaagtgggagagcttcg--------------agtcgttcaaagtggtggagcactag 15536  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtacca 326  Q
    ||| |||||| |||||| || ||||||||||||||||||||  || ||||||||||| |||| ||||||| | |||  |||| |||| | ||||||||||    
T  15537 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaaatgaatgctttaacgattctacagcggtgagggctacggtcctg-attatggtacca 15634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 8513 - 8465
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  8513 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaa 8465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 98; Significance: 4e-48; HSPs: 6)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 126 - 340
Target Start/End: Original strand, 17371 - 17587
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca-c 224  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||  ||||||||||||| ||||||||| ||||||||      
T  17371 gagttgtatgtagatatacacaagtgggtcagttacataagcataaaagcgggagggcttcggccctggaacgccttgtcgttcaaagctgtggaacatt 17470  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||||| ||||||||||||| |||||||| |  | |||| ||||||||||||| |||||| | ||||  |||||||| ||||||||    
T  17471 ttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgttttaaccattcgatcagcggtgagggtttcggccctg-aatatggt 17569  T
Q  323 accacatgcatagttgca 340  Q
    |||||||||||| |||||    
T  17570 accacatgcatatttgca 17587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 100 - 340
Target Start/End: Original strand, 10048 - 10291
Alignment:
Q  100 gtcatatacatacatacgcattag-tggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| | | ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||| ||  |||||||    
T  10048 gtcatatacatatatatgcattgggttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcgggagggcttcagccctggaacg 10147  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcg 295  Q
    |||||| ||||||||  ||||||||| | |||||| ||||||||||| |||||||| |||| |||||||| |  | ||||||||||||||||||  ||||    
T  10148 ccttgtcgttcaaagatgtggaacactttgttgttaaaagcggtgtttagcggtgaagactcatgtcctgaaaaagaatgctttaaccattcgattagcg 10247  T
Q  296 gcgtgggtcacggccctgaaatatggtaccacatgcatagttgca 340  Q
    | | |||   |||||||| |||||||||||||||||||| |||||    
T  10248 gtgagggcttcggccctg-aatatggtaccacatgcatatttgca 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 72464 - 72229
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || |||||||||||||||||||||||||||||||  |||||||||||||| || ||| || ||||   ||||||    
T  72464 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggttagtttcataagcataaaagcggtgagggcctcggtcctggaac 72365  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattcgacagc 294  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||   | |||||||||||||||| | |||    
T  72364 gccttgtcgtttaaagcggtggaacactatgttgttcaaagcggtatt-agcggtgaggactcatgtcctgataaaagaatgctttaaccattctatagc 72266  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    || | |||   ||||| ||  ||||||||||||||||||    
T  72265 ggtgagggcttcggccttg--atatggtaccacatgcat 72229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 35884 - 35947
Alignment:
Q  315 aatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgc 378  Q
    |||||||||||||||||||||||||| |||| | ||||||||||| |||| |||| || |||||    
T  35884 aatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgttattgc 35947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 400 - 489
Alignment:
Q  127 agttgtatgtagatatacacaagtgggtt-agtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||| | ||||| ||| | |   |||||| | ||||||||||||||||    
T  400 agttgtatgtagatatacacaagtggggtcagttgcataagcataaa-gcgggagggctcctgtactggaacactttgttgttcaaagcgg 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 6559 - 6648
Alignment:
Q  127 agttgtatgtagatatacacaagtgggtt-agtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||| | ||||| ||| | |   |||||| | ||||||||||||||||    
T  6559 agttgtatgtagatatacacaagtggggtcagttgcataagcataaa-gcgggagggctcctgtactggaacactttgttgttcaaagcgg 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 141529 - 141326
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||    
T  141529 gttgtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggagcactag 141430  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    ||| |||||| |||||| || |||||||||||| |||||||    |||||||||||||||| ||||||| | |||   ||| |||| | |||||||||||    
T  141429 ttgctcaaagtggtgtt-agtggtgaggacttacgtcctgaaatgaatgctttaaccattctacagcggtgagggcttcggtcctg-attatggtaccac 141332  T
Q  328 atgcat 333  Q
    ||||||    
T  141331 atgcat 141326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 146775 - 146611
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||| |||||||||||||| ||   | |||||| ||||||||||||||||||||| || ||||||||||||| |||||||| |||||| |||    
T  146775 gagttgtatgtatatatacacaagtggagtccattgcataatcataaaagtgggagagcttcgtctctggaacgccttgtcgttcaaagtggtggagcac 146676  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    |||||| |||||| ||| || || ||||||||||||||||||||  || ||||||||||||||||    
T  146675 tagttgctcaaagtggtttttagtggtgaggacttatgtcctgaaaatgaatgctttaaccattc 146611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 16017 - 16225
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| || ||| ||||||||| |||||  |||| ||| ||||  ||||||||||||| ||||||||||||||||||||    
T  16017 agttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcaggagggctccggccctggaacgccttgtcgttcaaagcggtggaacact 16116  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcg-acagcggcgtgggtcacggccctgaaatatggta 323  Q
      |||||||||||||||||| |||||||||||||||||||||||  | |||||||||| |||||| | ||||| | |||  ||||||||| |||||||||    
T  16117 ttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaagaatgctttaagcattcgaatagcggtgagggctacggccctg-aatatggta 16215  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  16216 ccacatgcat 16225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 7997 - 8162
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| || ||| ||||||| | ||||| ||||| ||| ||||  |||||| |||||| ||||||||||||||||||||    
T  7997 agttgtatgtagatatacacaagtggagtcagttgcataaggacaaaagcgggagggctccggccctggaactccttgtcgttcaaagcggtggaacact 8096  T
Q  226 a-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
      |||||||||||||||||| ||||||||||||| ||||||| |  | ||||||||||||||||||    
T  8097 ttgttgttcaaagcggtgtttagcggtgaggactcatgtcctaaaaagaatgctttaaccattcga 8162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 126 - 355
Target Start/End: Complemental strand, 529 - 298
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||| |||  ||||||||||||| |||||||||||||||||||     
T  529 gagttgtatgtagatatacacaagtgggtcagttgcataagtataaaagcgggagggctttggccctggaacgccttgtcgttcaaagcggtggaacact 430  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggt 322  Q
    | |||||||||||||||||| ||||||||||||| |||||||| |  | |||||||||||||||| |  ||||| | |||   |||||||| ||||||||    
T  429 ttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgctttaaccattcaattagcggtgagggcttcggccctg-aatatggt 331  T
Q  323 accacatgcatagttgcaattgtcggggagtct 355  Q
    ||||||||||||  |||| |||| | |||||||    
T  330 accacatgcatatctgcatttgttgaggagtct 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 126 - 333
Target Start/End: Complemental strand, 10548 - 10341
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    ||||||||||||||||||||| ||| ||| ||| |||||| |||||||||||||||||||||||| ||| ||||||||| |||||||| |||||| ||||    
T  10548 gagttgtatgtagatatacacgagtcggtcagttgcataatcataaaagtgggagagcttcggctctgggacgccttgtcgttcaaagtggtggagcact 10449  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtac 324  Q
     |||| |||||| | |||| || | ||||||||||||||||||  || |||||||||||||||| ||||||| | |||  ||||||||| | ||||||||    
T  10448 ggttgctcaaagtgatgtttagtgatgaggacttatgtcctgaaaatgaatgctttaaccattctacagcggtgagggctacggccctg-attatggtac 10350  T
Q  325 cacatgcat 333  Q
    |||||||||    
T  10349 cacatgcat 10341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 50948 - 51148
Alignment:
Q  132 tatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgt 231  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| | ||||||||| | |||||||| |||||| |||||||||     
T  50948 tatgtagatatacacaagtaggtcagttgcataagcataaaagtgggagagcttcggctctagaacgccttatcgttcaaagtggtggagcactagttgc 51047  T
Q  232 tcaaagcggtgttgagcggtgaggacttatgtcctgatga-taatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
    |||||| |||||| || ||||||||||||||||||||  |  |||||||||||||||| ||||||| | |||  |||| |||| | ||||||||||||||    
T  51048 tcaaagtggtgtt-agtggtgaggacttatgtcctgaaaacgaatgctttaaccattctacagcggtgagggctacggtcctg-attatggtaccacatg 51145  T
Q  331 cat 333  Q
    |||    
T  51146 cat 51148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 6e-44; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 265300 - 265100
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||  |||||||||    
T  265300 gtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggggcactagttg 265201  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || |||||||||||||||| |||    |||||||||||||||| ||||||| |  ||  |||| |||| | ||||||||||||||    
T  265200 ctcaaagtggtgtt-agtggtgaggacttatgtcatgaaatgaatgctttaaccattctacagcggtgaaggctacggtcctg-attatggtaccacatg 265103  T
Q  331 cat 333  Q
    |||    
T  265102 cat 265100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 333
Target Start/End: Complemental strand, 258874 - 258674
Alignment:
Q  131 gtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttg 230  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||  |||||||||    
T  258874 gtatgtagatatacacaagtgggtcagttgcataagcataacagtgggagagcttcggctctggaacgccttgtcgttcaaagtggtggggcactagttg 258775  T
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatg 330  Q
     |||||| |||||| || ||||||||| |||||| |||    |||||||||||||||| ||||||| |  ||  |||| |||| | ||||||||||||||    
T  258774 ctcaaagtggtgtt-agtggtgaggacatatgtcatgaaatgaatgctttaaccattctacagcggtgaaggctacggtcctg-attatggtaccacatg 258677  T
Q  331 cat 333  Q
    |||    
T  258676 cat 258674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 18339 - 18412
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||  ||||||||||||||||||    
T  18339 tggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtttttgcatgagtcgttgttg 18412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 88 - 288
Target Start/End: Original strand, 171741 - 171945
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagctt 185  Q
    ||||||| ||| ||||||||  |||||| ||||| || ||||||||||||||||||| |||||||| || ||| ||||||||| ||||| ||||| |||     
T  171741 atggagtggtaagtcatataagtacatatgcatttgttggagttgtatgtagatataaacaagtggagtcagttgcataagcacaaaagcgggagggctc 171840  T
Q  186 cggctttggaacgccttgttgttcaaagcggtggaacactagttgttc-aaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaac 283  Q
    ||||  ||||||||||| | |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||  || |||||||||||    
T  171841 cggccctggaacgccttatcgttcaaagcggtggaacacttgttgttcaaaagcggtgtttagcggtgaggacttatgtcctgaaaatgaatgctttaac 171940  T
Q  284 cattc 288  Q
    |||||    
T  171941 cattc 171945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 8619 - 8453
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacact 225  Q
    |||||||||||||||||||||||||| |||||| |||||| ||| |||| ||||| || |||||  ||||| ||||||| ||||||||||||||||||||    
T  8619 agttgtatgtagatatacacaagtggagttagttgcataaacatgaaagcgggagggcctcggccctggaatgccttgtcgttcaaagcggtggaacact 8520  T
Q  226 agttgttcaaagcggtgttgagcggtgaggacttatgtcctg--atgataatgctttaaccattcga 290  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |  | ||||||||||||||||||    
T  8519 agttgttcaaagctgtgtttagcggtgaggacttatgtcctggaaaaagaatgctttaaccattcga 8453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 100 - 268
Target Start/End: Complemental strand, 35013 - 34842
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || ||||||| |||||||||||||||||||| || ||| ||||||||| ||||| ||||| ||| ||||  ||||||    
T  35013 gtcatataaatacatatgcatttgttggagttgcatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctccggccctggaac 34914  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  34913 gccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctga 34842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 16834 - 17071
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||  |||  ||||||    
T  16834 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctctggccctggaac 16933  T
Q  198 gccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcga-cagc 294  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||| |||||||| |  | |||| |||||||||||||  |||    
T  16934 gccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctgaaaaagaatgttttaaccattcgattagc 17033  T
Q  295 ggcgtgggtcacggccctgaaatatggtaccacatgcat 333  Q
    || | |||   |||||||| |||||||||||||||||||    
T  17034 ggtgagggcttcggccctg-aatatggtaccacatgcat 17071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 269
Target Start/End: Original strand, 11884 - 12055
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| || ||||   ||||||    
T  11884 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagggcctcggtcctggaac 11983  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat 269  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  11984 gccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgtt-agcggtgaggactcatgtcctgat 12055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 5845 - 6035
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || ||||||||||| |||||||||||||||| || ||| ||||||||| ||||| ||||| ||| ||||  ||||||    
T  5845 gtcatataaatacatatgcatttgttggagttgtatgaagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctccggccctggaac 5944  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||  |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||  || ||| ||||||||||||    
T  5945 gccttgccgttcaaagcggtggaacacttgttgttcaaagcggtgtt-agcgatgaggacttatgtcctgaaaatgaattctttaaccattc 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 121 - 314
Target Start/End: Complemental strand, 183 - 1
Alignment:
Q  121 tagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtgga 220  Q
    |||| |||||||||||||||||||||| || || |||| ||||||   | || ||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  183 tagttgagttgtatgtagatatacacaggttgggtagttgcataatttttaa-gtgggagagcttcggctctggaacgccttgtcgttcaaagtggtgga 85  T
Q  221 acactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctga 314  Q
    ||||||||||||||||||          |||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  84 acactagttgttcaaagc----------ggtgaggacttaggtcctgttgagaatgctttaaccattcgacagcggtgtgggtcacggtcctga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 14212 - 14052
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||| | ||||||||||| |||||||| |||||| |||| |    
T  14212 gttgtatgtagatatacacaagggggttagttgcataaacatagaagtgggagagcttcggctctagaacgccttgtcgttcaaagtggtggagcactcg 14113  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||| |||||| |||||| || || |||||||||||||||||  || ||||||||||||||||    
T  14112 ttgctcaaagtggtgtt-agtggcgaggacttatgtcctgaaaatgaatgctttaaccattc 14052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 293
Target Start/End: Complemental strand, 24413 - 24248
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||| |||||| |||||||||||| | ||||||||||| |||||||| |||||| ||||      
T  24413 gttgtatgtggatatacacaaggcggttagttgcataagcatagaagtggaagagcttcggctctagaacgccttgtcgttcaaagtggtggagcactca 24314  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattcgacag 293  Q
    ||  |||||| |||||| || || |||||||||||||||||  || |||||||||||||||| ||||    
T  24313 ttcctcaaagtggtgtt-agtggcgaggacttatgtcctgaaaatgaatgctttaaccattctacag 24248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 128 - 295
Target Start/End: Original strand, 14544 - 14710
Alignment:
Q  128 gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactag 227  Q
    |||||||||||||||||| ||||| || ||| | |||||||||| |||||||||||||||||| | ||||||||||| |||||||| |||||| ||||||    
T  14544 gttgtatgtagatatacataagtgagtcagttgaataagcataacagtgggagagcttcggctctagaacgccttgtcgttcaaagtggtggagcactag 14643  T
Q  228 ttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcg 295  Q
    ||| |||||| |||||| || ||||||||||||||||||||    |||| ||||||||||| ||||||    
T  14644 ttgctcaaagtggtgtt-agtggtgaggacttatgtcctgaaatgaatgttttaaccattctacagcg 14710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 4217 - 4368
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |  || || | |||   |||||||||| |||||||||||||||||||||||| |||    
T  4217 agcggtgaggacttatgtcctgatga--atgctttaaccattcaattagaggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcatttg 4313  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||| |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  4314 tcgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttgttggttg 4368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 10151 - 10200
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||| ||| |||||||||| |||||||||| || |||||||||||||||    
T  10151 gagtcgtagtggtgttgtcatgtcattgcataagacgttgttgttggttg 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 117 - 288
Target Start/End: Complemental strand, 1055 - 881
Alignment:
Q  117 gcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcg 215  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| || ||||   ||||||||||||| ||||||||||    
T  1055 gcattagttgagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagtgcctcggtcctggaacgccttgtcgttcaaagcg 956  T
Q  216 gtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    ||||||||||| |||||||||||||||||| || |||||||||  ||||| ||||   | ||||||||||||||||    
T  955 gtggaacactatgttgttcaaagcggtgtt-agtggtgaggacgcatgtcttgataaaagaatgctttaaccattc 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 399
Target Start/End: Complemental strand, 707 - 559
Alignment:
Q  245 gagcggtgaggacttatgtcctgatgataatgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    ||||||||||| |||  ||||||||||  ||||||||||||||| | ||||| | |||   ||| ||||   | |||||||||||||||| |||||  |     
T  707 gagcggtgagggcttcggtcctgatga--atgctttaaccattcaaaagcggtgagggcttcggtcctg---tttggtaccacatgcataattgcatatt 613  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    | | |||||||||| | |||||||| |||| |||||||||| | |||||||||||    
T  612 ttgaggagtcttagtgatgttgtcatgtca-tgcatgagtcttagttgttggttg 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 100 - 269
Target Start/End: Original strand, 24444 - 24615
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgg-gagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || || ||||||||||||||||||||||||||| ||| ||||||||||||||| || ||| || ||||   ||||||    
T  24444 gtcatataaatacatatgcatttgttgaagttgtatgtagatatacacaagtgggtcagttgcataagcataaaagcggtgagggcctcggtcctggaac 24543  T
Q  198 gccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat 269  Q
    | ||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  24544 gacttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgtt-aacggtgaggactcatgtcctgat 24615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 10588 - 10651
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||||||||||||||||||    
T  10588 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacacaagtgg 10651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 18767 - 18830
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||| ||| |||||||| | | ||| ||||| || |||||||||||||||||||||||||||    
T  18767 atggagttgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacacaagtgg 18830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 288
Target Start/End: Original strand, 13358 - 13548
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacg 198  Q
    |||| ||| ||||||| |||||  |||||||||||||||||||||||||| |||| ||| ||||||||||| |||| ||||| |||   ||  | ||| |    
T  13358 gtcacataaatacatatgcattgttggagttgtatgtagatatacacaagcgggtcagttgcataagcatataaagcgggagggctcttgccctagaatg 13457  T
Q  199 ccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    |||| |||||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||| |  | ||||||||||||||||    
T  13458 ccttattgttcaaagcggtggaacacatgttgttcaaagcggtgtttagtggtgaggacttatgtcctgaaaaagaatgctttaaccattc 13548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 3444 - 3326
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||| |||   ||  ||||||    
T  3444 gtcatatacatatatatgcatttgtcgagttgtatgtagatatacacaagtggagttagttgcataagcatataaagcgggagggctcttgccctggaac 3345  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| ||| |||||||    
T  3344 gccttgtcgtttaaagcgg 3326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 17096 - 16972
Alignment:
Q  130 tgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagtt 229  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||||||||||  |||    
T  17096 tgtatgtagatatatacaagtgggtcagttgcataagcataaaagcgggagggcttcggcgctggaacgccttgtcgttcaaagcggtggaacacatgtt 16997  T
Q  230 gttcaaagcggtgttgagcggtgagg 255  Q
    ||||||||| ||||| ||||||||||    
T  16996 gttcaaagcagtgtt-agcggtgagg 16972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 44426 - 44282
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacg 198  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||  |||||||   |||||||    
T  44426 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagttagttgcataagcacaaaagcgggatggcttcggtcctggaacg 44327  T
Q  199 ccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||    
T  44326 ccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtg 44282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 255
Target Start/End: Complemental strand, 56069 - 55939
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| |||||| |||||| || ||||| ||||| ||| ||||  ||||||||||||| |||||||||||||||||||     
T  56069 agttgtatgtagatatacacaagtggagttagttgcataaacacaaaagcgggagggctccggccctggaacgccttgtcgttcaaagcggtggaacact 55970  T
Q  225 tagttgttcaaagcggtgttgagcggtgagg 255  Q
    | |||||||||||||||||| ||||||||||    
T  55969 ttgttgttcaaagcggtgtttagcggtgagg 55939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 290
Target Start/End: Original strand, 27737 - 27902
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaa-agtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    ||||||||||||||||||||   ||||||| || |||||  ||| || || ||||||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  27737 gagttgtatgtagatatacaagggtgggttggttgcatagtcattaacagcgggagagcttcggctctggaacggcttgtcgttcaaagtggtggaacac 27836  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcct-gatgataatgctttaaccattcga 290  Q
     ||||||||||||||||||| |||| ||||||||||||||||  |  | ||||||||||||||||||    
T  27837 gagttgttcaaagcggtgtt-agcgatgaggacttatgtcctataaaagaatgctttaaccattcga 27902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 5753 - 5638
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacacta 226  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  |||||||||| || ||||||||||||||||||||     
T  5753 gttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgcctcgtcgttcaaagcggtggaacactt 5654  T
Q  227 gttgttcaaagcggtg 242  Q
    ||||||||||||||||    
T  5653 gttgttcaaagcggtg 5638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 1981 - 1830
Alignment:
Q  246 agcggtgaggacttatgtcctgatgat-aatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaatt 343  Q
    |||||||||||||||||||||||  || |||||||||||||||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| ||    
T  1981 agcggtgaggacttatgtcctga--atgaatgctttaaccattcaattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcattt 1885  T
Q  344 gtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    || | ||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  1884 gttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgtcgttggtt 1830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 2153 - 2098
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggag 180  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  2153 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggag 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 94 - 4
Alignment:
Q  147 aagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacactagttgttcaaag 237  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| |||||||| |||||| ||||||||| ||||||    
T  94 aagtgggttagttgcataagcataaaagtgggagagcttcggctctggaacgctttgtcgttcaaagtggtggagcactagttgctcaaag 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 3270 - 3415
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| | ||| || |||||||||||||||||||||||||||| || ||| ||||||||| ||||| ||||| ||| ||||  ||||||    
T  3270 gtcatataaatacatatgtatttgttggagttgtatgtagatatacacaagtggagtcagttgcataagcacaaaagcgggagggctccggccctggaac 3369  T
Q  198 gccttgttgttcaaagcggtggaacac-tagttgttcaaagcggtg 242  Q
     |||||| ||||||||||||||||||| | ||||||||||||||||    
T  3370 accttgtcgttcaaagcggtggaacacgttgttgttcaaagcggtg 3415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 3409 - 3453
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||    
T  3409 agcggtgaggacttatgtcctaaaaagaatgctttaaccattcga 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 2376 - 2471
Alignment:
Q  194 gaacgccttgttgttcaaagcggtggaacactagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgat-aatgctttaaccattc 288  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||  || ||||||||||| ||||    
T  2376 gaacgccttgtcgttcaaagcggtggaacacttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaaaatgaatgctttaactattc 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 17046 - 17190
Alignment:
Q  100 gtcatatacatacatacgcattagt-ggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaac 197  Q
    |||||||| ||||||| ||||| || |||||||||||||||||||||||||||| || | | ||||| ||| ||||  ||||| |||  |||  ||||||    
T  17046 gtcatataaatacatatgcatttgttggagttgtatgtagatatacacaagtggagtcaattgcataggcacaaaatcgggagggctctggccctggaac 17145  T
Q  198 gccttgttgttcaaagcggtggaacactagttgttcaaagcggtg 242  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  17146 gccttgtcgttcaaagtggtggaacacttgttgttcaaagcggtg 17190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 7147 - 6984
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa-gtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac 224  Q
    |||||||||||||||||||||||||| || ||| | |||| ||||||| | ||||| ||   |||  ||||||| ||||| |||||||||||||||||||    
T  7147 agttgtatgtagatatacacaagtggagtcagttgtataaccataaaaagcgggagggccctggccctggaacgtcttgtcgttcaaagcggtggaacac 7048  T
Q  225 ta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattc 288  Q
    |  |||||||||||||||| | |||||||||||||||||||||| |||  ||||||||||||||||    
T  7047 tttgttgttcaaagcggtgattagcggtgaggacttatgtcctgaatg--aatgctttaaccattc 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 401
Target Start/End: Complemental strand, 19789 - 19730
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||||||| |||||||||||    
T  19789 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttg-tgttggttgaa 19730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 44086 - 44294
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| | ||||| ||||||| ||||| ||   ||| |||||||||||||| |||||||| ||||||||||     
T  44086 agttgtatgtagatatacacaagtggagtcagttgtataagtataaaagcgggagggccctggccttggaacgccttgtcgttcaaagtggtggaacact 44185  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | ||||||||||| |||||| |||  ||| |||||||||| |||    |||||||||||||||| |  ||||| | |||   |||||||| |||||||||    
T  44186 ttgttgttcaaagtggtgtttagcaatgacgacttatgtcttgaaatgaatgctttaaccattcaattagcggtgagggctccggccctg-aatatggta 44284  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  44285 ccacatgcat 44294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 49152 - 49360
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| | ||||| ||||||| ||||| ||   ||| |||||||||||||| |||||||| ||||||||||     
T  49152 agttgtatgtagatatacacaagtggagtcagttgtataagtataaaagcgggagggccctggccttggaacgccttgtcgttcaaagtggtggaacact 49251  T
Q  225 tagttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggta 323  Q
    | ||||||||||| |||||| |||  ||| |||||||||| |||    |||||||||||||||| |  ||||| | |||   |||||||| |||||||||    
T  49252 ttgttgttcaaagtggtgtttagcaatgacgacttatgtcttgaaatgaatgctttaaccattcaattagcggtgagggctccggccctg-aatatggta 49350  T
Q  324 ccacatgcat 333  Q
    ||||||||||    
T  49351 ccacatgcat 49360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 201 - 110
Alignment:
Q  306 cggccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    |||||||||| |||||||||||||||||||||||| |||| | ||||||||||| |||| |||| |||||||||||||||||||| |||||||    
T  201 cggccctgaa-tatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtcgttgtcgttggtt 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 468 - 340
Alignment:
Q  88 atggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtg-ggttagtcgcataagcataaaagtgggagagcttc 186  Q
    ||||||||||| |||||||| | | ||| ||||| || ||||||||||||||||||| ||||||  || |||  |||||||||||||| ||||| |||      
T  468 atggagtcgtaagtcatatatacatatatgcatt-gttgagttgtatgtagatatacgcaagtgaagtcagttacataagcataaaagagggagggctct 370  T
Q  187 ggctttggaacgccttgttgttcaaagcgg 216  Q
    |||  |||||||||| ||  ||||||||||    
T  369 ggccctggaacgcctcgtcattcaaagcgg 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 402
Target Start/End: Complemental strand, 1299 - 1217
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||| || ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1299 tggtaccacatgcatcgtcgca-ttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgttgttgttggttgaat 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 392
Target Start/End: Original strand, 97493 - 97577
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||||||    
T  97493 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 97577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 399
Target Start/End: Original strand, 39 - 190
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||||||||||||  |||||  ||||||||||| ||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| |||    
T  39 agcggtgaggacttatgtctcgatga--atgctttaaccgttcaattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcatttg 135  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |   |||||||||  |||||||||  || ||||||||||||||||||||||||||    
T  136 ttcaggagtcttattggtgttgtcctgtaattgcatgagtcgttgttgttggttg 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 398
Target Start/End: Original strand, 16137 - 16288
Alignment:
Q  246 agcggtgaggacttatgtcctgatgat-aatgctttaaccattcgac-agcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaatt 343  Q
    |||||||||||||||||||||||  || |||| ||||||||||| |  ||||| | |||   |||||||||| |||||||||||||||||||||||| ||    
T  16137 agcggtgaggacttatgtcctga--atgaatgttttaaccattcaattagcggtgagggcttcggccctgaa-tatggtaccacatgcatagttgcattt 16233  T
Q  344 gtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    || | ||||||||||| |||| |||| |||| |||||||||||| || |||||||    
T  16234 gttgaggagtcttagaagtgtcgtcatgtcagtgcatgagtcgtcgtcgttggtt 16288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 15966 - 16021
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggag 180  Q
    |||||||||||||||||||| |||||| || ||| ||||||||||||||| |||||    
T  15966 gagttgtatgtagatatacaaaagtggagtcagttgcataagcataaaagcgggag 16021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 385
Target Start/End: Original strand, 2817 - 3077
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   |||||||| |||| ||||||| || |||||||    
T  2817 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaaca 2916  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgatgata--atgctttaaccattcgacagcggcgtgggtcacggccctgaaatatg 320  Q
    ||| |||||||||| || |||| | || |||||||| |||||||||| | |  ||||||||||||||| | | ||  | |||   |||| ||||  ||||    
T  2917 ctatgttgttcaaaacgatgttaa-cgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctga--tatg 3013  T
Q  321 gtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtc 385  Q
    |||||||||||||||||||| |||| | |||||||||| || ||||||| ||| |||||||||||    
T  3014 gtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 4478 - 4552
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||| |||||    
T  4478 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtcgtcgttgt 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 25821 - 25703
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| ||| | ||  ||||||    
T  25821 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcctgccctggaac 25722  T
Q  198 gccttgttgttcaaagcgg 216  Q
    ||||||| |||||||||||    
T  25721 gccttgtcgttcaaagcgg 25703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 334
Target Start/End: Original strand, 52671 - 52815
Alignment:
Q  192 tggaacgccttgttgttcaaagcggtggaacacta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcg 289  Q
    ||||||| ||||| ||||||||||||||||||||  |||||||||||||||||| ||||||||||||  |||||||| |  | |||||||||||||||||    
T  52671 tggaacgtcttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacccatgtcctgaaaaagaatgctttaaccattcg 52770  T
Q  290 a-cagcggcgtgggtcacggccctgaaatatggtaccacatgcata 334  Q
    |  ||||| | |||   |||||||| | ||||||||||||||||||    
T  52771 attagcggtgagggcttcggccctg-attatggtaccacatgcata 52815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 370594 - 370477
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||| | ||| |||  |||  ||||||||||||| |||||||||||||||||||     
T  370594 agttgtatgtagatatacacaagtggtgtcagttgcataagcacaaaagcgtgagggctctggccctggaacgccttgtcgttcaaagcggtggaacact 370495  T
Q  225 tagttgttcaaagcggtg 242  Q
    | ||||||||||| ||||    
T  370494 ttgttgttcaaagtggtg 370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 4949 - 5065
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaac 197  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| |||||| |||| |||| ||||| ||| | || |||||||    
T  4949 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataaacatataaagcgggagggctcctgccttggaac 5048  T
Q  198 gccttgttgttcaaagc 214  Q
    ||||||| |||||||||    
T  5049 gccttgtcgttcaaagc 5065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 10885 - 10833
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  10885 ggagtcttagtggtgttgtcaagtagttgcatgagtcgttgttgttggttgaa 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 401
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||| |||||||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  5929 tgcatagtcgcaattgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgtcgttgttggttgaa 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 392
Target Start/End: Original strand, 43049 - 43133
Alignment:
Q  308 gccctgaaatatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||| || ||||||||||||||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||| ||||||||    
T  43049 gccctgtaaaatggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagccgttgttg 43133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1726 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold1726
Description:

Target: scaffold1726; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 435 - 344
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggt 217  Q
    ||||||||||||| |||||||||||| || ||||||||| ||||||||| |||||  |||| ||  ||||||||||||| ||||||||||||    
T  435 gagttgtatgtaggtatacacaagtgagtaagtcgcatatgcataaaagcgggaggacttctgccctggaacgccttgtcgttcaaagcggt 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1726; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 288
Target Start/End: Complemental strand, 310 - 270
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  310 agcggtgaggacttatgtcctgatg--aatgctttaaccattc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 17373 - 17488
Alignment:
Q  103 atatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgcc 200  Q
    ||||||||| ||| ||||| || ||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||| |||   ||  |||||||||    
T  17373 atatacatatatatgcatttgtcgagttgtatgtagatatacacaagtggagttagttgcataagcatataaagcgggagggctcttgccctggaacgcc 17472  T
Q  201 ttgttgttcaaagcgg 216  Q
    |||| |||||||||||    
T  17473 ttgtcgttcaaagcgg 17488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 57154 - 57245
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||||    
T  57154 gttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcggtg 57245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 141479 - 141388
Alignment:
Q  128 gttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||||    
T  141479 gttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcggtg 141388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 19565 - 19639
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||| ||||| ||||||||||||||||| |||||    
T  19565 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgatgtcatgtcattgcatgagtcgtcgttgt 19639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 6848 - 6758
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||  |||  ||||||||||||| |||||||||||    
T  6848 agttgtatgtagatatacacaagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgccttgtcgttcaaagcgg 6758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 20727 - 20676
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  20727 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 20676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 31394 - 31343
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  31394 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 31343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 2365 - 2284
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggag 180  Q
    |||||||||||| ||| ||||| || ||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||    
T  2365 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagttagttgcataagcacaaaagcgggag 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 7437 - 7344
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaa-agtgggagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    |||||||||||||||||||||||||||||  || |||||  |||| | || ||||||||||||||| ||||||||| ||| |||||||||||||    
T  7437 gagttgtatgtagatatacacaagtgggtcggttgcatagtcatatacagcgggagagcttcggctctggaacgccctgtcgttcaaagcggtg 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 3398 - 3323
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgcc 200  Q
    |||||||||||||||||||||||||||||  || |||||  |||| | || ||||||||||||||| |||||||||    
T  3398 gagttgtatgtagatatacacaagtgggtcggttgcatagtcatatacagcgggagagcttcggctctggaacgcc 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 7356 - 7253
Alignment:
Q  230 gttcaaagcggtgttgagcggtgaggacttatgtcctg-atgataatgctttaaccattcg-acagcggcgtgggtcacggccctgaaatatggtaccac 327  Q
    ||||||||||||||| ||||||||||||||| |||||| |  | ||||||||||||||||| | ||||| | |||   |||||||| | |||||||||||    
T  7356 gttcaaagcggtgtt-agcggtgaggacttaggtcctgtaaaagaatgctttaaccattcgtatagcggtgagggctccggccctg-attatggtaccac 7259  T
Q  328 atgcat 333  Q
    ||||||    
T  7258 atgcat 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 8475 - 8356
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaa 196  Q
    |||||||||||| ||| ||||| || || ||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||| |||||    
T  8475 gtcatatacatatatatgcatttgttgaagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgctctggaa 8376  T
Q  197 cgccttgttgttcaaagcgg 216  Q
    |||||||| |||||||||||    
T  8375 cgccttgtcgttcaaagcgg 8356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 18559 - 18440
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaa 196  Q
    |||||||||||| ||| ||||| || || ||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||| |||||    
T  18559 gtcatatacatatatatgcatttgttgaagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgctctggaa 18460  T
Q  197 cgccttgttgttcaaagcgg 216  Q
    |||||||| |||||||||||    
T  18459 cgccttgtcgttcaaagcgg 18440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 51145 - 51071
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgt 393  Q
    |||||||||||||||||| ||| |||| | |||||||||||||||| ||||  |||||||||||||||| |||||    
T  51145 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgtcgtcatatcattgcatgagtcgtcgttgt 51071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 51341 - 51252
Alignment:
Q  129 ttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||| || | | ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  51341 ttgtatgtagatatacacaagtggagtcaattgcataagcatataaagcgggagggctcatgccctggaacgccttgtcgttcaaagcgg 51252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 1472 - 1419
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  1472 ggagtcttagaggtgttgtcatgtcattacatgagttgttgttgttggttgaat 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 38636 - 38752
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||| ||||| || ||| ||||||||||||||| ||||| |||  |||  |||||||||| || |||||||||||| ||||||     
T  38636 agttgtatgtagatatacacgagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgcctcgtcgttcaaagcggt-gaacact 38734  T
Q  225 tagttgttcaaagcggtg 242  Q
    | |||||| |||||||||    
T  38735 ttgttgttaaaagcggtg 38752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 242
Target Start/End: Original strand, 136696 - 136812
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcggtggaacac- 224  Q
    |||||||||||||||||||| ||||| || ||| ||||||||||||||| ||||| |||  |||  |||||||||| || |||||||||||| ||||||     
T  136696 agttgtatgtagatatacacgagtggagtcagttgcataagcataaaagcgggagggctctggccctggaacgcctcgtcgttcaaagcggt-gaacact 136794  T
Q  225 tagttgttcaaagcggtg 242  Q
    | |||||| |||||||||    
T  136795 ttgttgttaaaagcggtg 136812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 113 - 164
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  113 gagtcatagaggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 25503 - 25440
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||| ||| |||| | |||||||||| |||||||||| ||||||||||||||||||||||    
T  25503 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 25440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 637 - 567
Alignment:
Q  101 tcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| |||||||||||    
T  637 tcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtggagtcagttgcataagcata 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 6211 - 6062
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcgacagc-ggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||| |||||| ||||||||  ||||||||||||||| | | | || | ||||  | |||||| ||| |||||||||||||||  ||||| |||    
T  6211 agcggtgagggcttatgccctgatga--atgctttaaccattcaatatccggtgagggtttctgccctgtaat-tggtaccacatgcattattgca-ttg 6116  T
Q  345 tcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggtt 398  Q
    ||| |||||||||| |||||||||  ||  ||||||||||| ||||||||||||    
T  6115 tcgaggagtcttagcggtgttgtcgagttgttgcatgagtcattgttgttggtt 6062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 3267 - 3357
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||| || || ||| |||||||||||||||  |||| |||  |||  ||||||||||||| |||||||||||    
T  3267 agttgtatgtagatatacacaagcggagtcagttgcataagcataaaagcaggagggctctggccctggaacgccttgtcgttcaaagcgg 3357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 8710 - 8640
Alignment:
Q  101 tcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||||||||| || ||| |||||||||||    
T  8710 tcatatacatatatatgcatttgtcgagttgtatgtagatatacacaagtggagtcagttgcataagcata 8640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 1718 - 1768
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  1718 gagtcttagaggtgttgtcatgtcaatgcatgagtcgttgttgatggttga 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 27126 - 27176
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  27126 gagtcatagaggagttgtcatgtcattgcatgagtcgttgttgttggttga 27176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 9 - 62
Alignment:
Q  316 atatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  9 atatggtaccacatgcatagttgcatttgttgaggagtcttagaggagttgtca 62  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 5004 - 5056
Alignment:
Q  100 gtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg 152  Q
    |||||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  5004 gtcatatacatatatatgcatttgttgagttgtatgtagatatacacaagtgg 5056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 5094 - 5186
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  5094 gagttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 5186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 61297 - 61368
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||  |||||||||||||||||||||||||||    
T  61297 tgcatagttgca-ttgttgaggagtcttagcggagttgtcaagtagttgcatgagtcgttgttgttggttgaa 61368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 80594 - 80635
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttag 358  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  80594 tatggtaccacatgcatagttgcaattgttgaggagtcttag 80635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 73085 - 73156
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||||| |||| | |||||||||| || ||||||| ||  ||||||||||||||||| |||||||||    
T  73085 tgcatagttgca-ttgttgaggagtcttagcggagttgtcaagtagttgcatgagtcgttgttattggttgaa 73156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 80393 - 80441
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||    
T  80393 gagttgtatgcagatatacacaagtggagtcagttgcataagcataaaa 80441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 4264 - 4370
Alignment:
Q  253 aggacttatgtcctgatgataa---tgctttaaccattcgacagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattgtcggg 349  Q
    |||||| |||||||||||| ||   |||||||||||||| | | ||| | |||  ||||||||||  |||||||||||||||||||||||| |||| | |    
T  4264 aggactcatgtcctgatgaaaagaatgctttaaccattctataacggtgagggcaacggccctga--tatggtaccacatgcatagttgcatttgttgag 4361  T
Q  350 gagtcttag 358  Q
    |||||||||    
T  4362 gagtcttag 4370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 4161 - 4209
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  4161 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaa 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 193 - 236
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  193 ggagtcttagtggtgttgtcatgtcattgcatgagtcgttgttg 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 8524 - 8473
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  8524 gagtcgtagtggagttgtcatgtcattgcatgagtcgttgttgttggttgaa 8473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 27449 - 27358
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  27449 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 27358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 9476 - 9357
Alignment:
Q  100 gtcatatacatacatacgcattagtgga-gttgtatgtagatatacacaagtgggtt-agtcgcataagcata-aaagtgggagagcttcggctttggaa 196  Q
    |||||||||||| ||| ||||| || || ||||||||||||||||||||||||| || ||| ||||||||||| |||| ||||| |||   ||  |||||    
T  9476 gtcatatacatatatatgcatttgttgaagttgtatgtagatatacacaagtggattcagttgcataagcatataaagcgggagggctcttgccctggaa 9377  T
Q  197 cgccttgttgttcaaagcgg 216  Q
    |||||||| ||||| |||||    
T  9376 cgccttgtcgttcatagcgg 9357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 41808 - 41871
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||| ||| |||| | |||||||||| |||||||||| || |||||||||||||||||||    
T  41808 tgcatagtcgcatttgttgaggagtcttagcggtgttgtcatgttattgcatgagtcgttgttg 41871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 26176 - 26069
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||| |||||| ||| ||||  ||||||||||||||| | |||||| | |||   |||||||||| |||||||||||||||||| ||||| |||    
T  26176 agcggtgagggcttatgccctaatga--atgctttaaccattcaaacagcggtgagggcttcggccctgaa-tatggtaccacatgcatatttgcatttg 26080  T
Q  345 tcggggagtct 355  Q
    | | |||||||    
T  26079 ttgaggagtct 26069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 26302 - 26211
Alignment:
Q  127 agttgtatgtagatatacacaagtg-ggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||  |||  | ||||||||||| |||| ||||| |||   ||| ||||||||||||| |||||||||||    
T  26302 agttgtatgtagatatacacaagtgaagttcattgcataagcatataaagcgggagggctcttgctctggaacgccttgtcgttcaaagcgg 26211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 27558 - 27451
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga-cagcggcgtgggtcacggccctgaaatatggtaccacatgcatagttgcaattg 344  Q
    |||||||||| |||||| ||| ||||  ||||||||||||||| | |||||| | |||   |||||||||| |||||||||||||||||| ||||| |||    
T  27558 agcggtgagggcttatgccctaatga--atgctttaaccattcaaacagcggtgagggcttcggccctgaa-tatggtaccacatgcatatttgcatttg 27462  T
Q  345 tcggggagtct 355  Q
    | | |||||||    
T  27461 ttgaggagtct 27451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 27684 - 27593
Alignment:
Q  127 agttgtatgtagatatacacaagtg-ggttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||  |||  | ||||||||||| |||| ||||| |||   ||| ||||||||||||| |||||||||||    
T  27684 agttgtatgtagatatacacaagtgaagttcattgcataagcatataaagcgggagggctcttgctctggaacgccttgtcgttcaaagcgg 27593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 1460 - 1518
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  1460 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 152
Target Start/End: Original strand, 1189 - 1218
Alignment:
Q  123 gtggagttgtatgtagatatacacaagtgg 152  Q
    ||||||||||||||||||||||||||||||    
T  1189 gtggagttgtatgtagatatacacaagtgg 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 2234 - 2176
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  2234 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 2176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 1105 - 1163
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  1105 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 7320 - 7361
Alignment:
Q  361 gtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  7320 gtgttgtcatgtcattgcatgggtcgttgttgttggttgaat 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 45487 - 45429
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  45487 attgtcgtggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 45429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 29786 - 29728
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  29786 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 29728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 44792 - 44702
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    ||||||||| |||||||||||||||| ||  || ||||||||||| ||| ||||| |||   ||  ||||||||||||| |||||||||||    
T  44792 agttgtatgaagatatacacaagtggagtccgttgcataagcatataagcgggagggctcttgccctggaacgccttgtcgttcaaagcgg 44702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 38508 - 38466
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattcga 290  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||    
T  38508 agcggtgaggacttatgtcttgatg--aatgctttaaccattcga 38466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 207977 - 208035
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  207977 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 208035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 401
Target Start/End: Original strand, 4951 - 4996
Alignment:
Q  356 tagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||    
T  4951 tagaggtgttgtcatgtagttgcatgagtcgttgttgttggttgaa 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 5594 - 5665
Alignment:
Q  329 tgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaat 402  Q
    |||||||||||| |||| | ||||||| || |||||||||| ||  ||||||||||||||||||||||||||||    
T  5594 tgcatagttgca-ttgttgaggagtct-agcggtgttgtcaagtagttgcatgagtcgttgttgttggttgaat 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 323 - 450
Alignment:
Q  89 tggagtcgtatgtcatatacatacatacgcattagtggagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgggagagcttcg 187  Q
    ||||||| || |||||||| | | ||| ||||| || |||||||||||||||||||||||| || || ||| |||| |||||||||| || || || |||    
T  323 tggagtcataagtcatatatacatatatgcatt-gtcgagttgtatgtagatatacacaagaggagtcagttgcatgagcataaaagcggaagggcctcg 421  T
Q  188 gctttggaacgccttgttgttcaaagcgg 216  Q
    |   |||||| |||||| |||||||||||    
T  422 gtcctggaacaccttgtcgttcaaagcgg 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 511 - 463
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaa 173  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  511 gagttgtatgtagatatacacaagtggagtcagttgcataagcataaaa 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 9493 - 9545
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||| |||||||||||| | |||||| |||||||||    
T  9493 ggagtcttagtggtgttgtcatgtcattgcatgaattgttgttcttggttgaa 9545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 26211 - 26159
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||  ||  |||||||||||||||||||||||||||    
T  26211 ggagtcttagcggtgttgtcgggtagttgcatgagtcgttgttgttggttgaa 26159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 288
Target Start/End: Complemental strand, 179 - 13
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    ||||||||||  ||||||||||||||| || ||| |||| |||||||||  |  |||| |||||| | |||||||| |||| ||||||| || |||||||    
T  179 gagttgtatgctgatatacacaagtggagtcagttgcattagcataaaaacgatgagaacttcggttctggaacgctttgtcgttcaaaacgatggaaca 80  T
Q  224 cta-gttgttcaaagcggtgttgagcggtgaggacttatgtcctgat--gataatgctttaaccattc 288  Q
    | | |||||||||| || |||| | || |||||||| ||||||||||   | ||||||||||||||||    
T  79 cgatgttgttcaaaacgatgtt-aacgatgaggactcatgtcctgataaaagaatgctttaaccattc 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 2178 - 2230
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| |||| |||||||||| ||  |||||||||||||||||||||||||||    
T  2178 ggagtgttagcggtgttgtcaagtagttgcatgagtcgttgttgttggttgaa 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 143976 - 143897
Alignment:
Q  319 tggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    |||||||||||||||| ||||| || | | || ||||||| ||||| |||| |||| |||||||||| |||||||||||||    
T  143976 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtca-tgcatgagtctttgttgttggttg 143897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 952 - 995
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    |||||||||| |||||||||| || |||||||||||||||||||    
T  952 ggagtcttagtggtgttgtcatgtaattgcatgagtcgttgttg 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1979 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 1040 - 989
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||| ||| || |||||||  ||||||||||||||||||||||||||||||    
T  1040 gagtcgtagtggagttgtcatatcattgcatgagtcgttgttgttggttgaa 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 366 - 401
Target Start/End: Original strand, 1943 - 1978
Alignment:
Q  366 gtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||| |||||||||||||||||||||||||||||||    
T  1943 gtcatgtcattgcatgagtcgttgttgttggttgaa 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 31540 - 31631
Alignment:
Q  126 gagttgtatgtagatatacacaagtgggttagtcgcataagcataaaagt-gggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||| |||| |||||||| || ||||||||| |||||||| | ||||||| ||| ||  || ||| |||||| |||||||||||    
T  31540 gagttgtatgtatatatgcacaagtgagtcagtcgcatatgcataaaaatcgggagagtttctgccctgcaacaccttgtcgttcaaagcgg 31631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 31666 - 31706
Alignment:
Q  246 agcggtgaggacttatgtcctgatgataatgctttaaccattc 288  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  31666 agcggtgaggacttatgtcctgatg--aatgctttaaccattc 31706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3080 - 2989
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata-aaagtgggagagcttcggctttggaacgccttgttgttcaaagcgg 216  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||  ||||| |||   ||  ||||||||||||| |||||||||||    
T  3080 agttgtatgtagatatacacaagtggagtcagttgcataagcatataaaacgggagggctcttgccctggaacgccttgtcgttcaaagcgg 2989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 1843 - 1801
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttg 392  Q
    ||||||||| |||||||||  ||||||||||||||||||||||    
T  1843 gagtcttagtggtgttgtcgtgtcattgcatgagtcgttgttg 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 2882 - 2844
Alignment:
Q  363 gttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  2882 gttgtcatgtcattgcataagtcgttgttgttggttgaa 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 11452 - 11546
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtgg-gagagcttcggctttggaacgccttgttgttcaaagcggtg 218  Q
    ||||| ||||||||||||||||||||| || ||| ||||||||||||||  || |||  | ||||   ||||||||||||| |||||||||||||    
T  11452 gagttatatgtagatatacacaagtggagtcagttgcataagcataaaaacggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtg 11546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 1548 - 1606
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| |||||||||  ||  |||||||||||| ||||||||||||    
T  1548 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgctgttgttggttg 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 206 - 264
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||| |||||||||| || ||||||  ||  |||||||||||||||||||||||||    
T  206 attgtcgaggagtcttagcggagttgtcgagtagttgcatgagtcgttgttgttggttg 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 22970 - 22920
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttga 400  Q
    ||||| ||| || |||||||  |||||||||||||||||||||||||||||    
T  22970 gagtcgtagtggagttgtcatttcattgcatgagtcgttgttgttggttga 22920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 20907 - 20870
Alignment:
Q  231 ttcaaagcggtgttgagcggtgaggacttatgtcctga 268  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  20907 ttcaaagcggtgtttagcgatgaggacttatgtcctga 20870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 11818 - 11867
Alignment:
Q  350 gagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttg 399  Q
    ||||||||| |||||||||  ||  |||||||||||||||||||||||||    
T  11818 gagtcttagcggtgttgtcgagtagttgcatgagtcgttgttgttggttg 11867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 4571 - 4684
Alignment:
Q  126 gagttgtatgtagatatacacaagtgg-gttagtcgcataagcataaaagtg-ggagagcttcggctttggaacgccttgttgttcaaagcggtggaaca 223  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||  |  |||  ||||||   ||||||||||||| ||||||| || |||| ||    
T  4571 gagttgtatgaagatatacacaagtggagtcagttgcataagcataaaaacgatgaggacttcggtcctggaacgccttgtcgttcaaaacgatggagca 4670  T
Q  224 cta-gttgttcaaa 236  Q
    ||| ||||||||||    
T  4671 ctatgttgttcaaa 4684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 297 - 349
Alignment:
Q  317 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtca 369  Q
    |||||| ||||||||||||||||| |||| | |||||||||| || |||||||    
T  297 tatggtcccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 18712 - 18668
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  18712 agttgtatgtagatatacacaagtggagtcagttgcataagcata 18668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 9502 - 9451
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| ||| |||||| ||  |||||||||||||||||||||||||||    
T  9502 ggagtcttagcggt-ttgtcaagtagttgcatgagtcgttgttgttggttgaa 9451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 13575 - 13524
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| ||| |||||| ||  |||||||||||||||||||||||||||    
T  13575 ggagtcttagcggt-ttgtcaagtagttgcatgagtcgttgttgttggttgaa 13524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 3957 - 4009
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggttgaa 401  Q
    |||||||||| |||||||||  ||  || ||||||||||||||||||||||||    
T  3957 ggagtcttagtggtgttgtcgtgtagttacatgagtcgttgttgttggttgaa 4009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 10655 - 10611
Alignment:
Q  127 agttgtatgtagatatacacaagtgg-gttagtcgcataagcata 170  Q
    |||||||||||||||||||||||||| || ||| |||||||||||    
T  10655 agttgtatgtagatatacacaagtggagtcagttgcataagcata 10611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 108834 - 108778
Alignment:
Q  341 attgtcggggagtcttagaggtgttgtcacgtcattgcatgagtcgttgttgttggt 397  Q
    ||||||| |||||||||| |||||||||  ||  ||||||||||||| |||||||||    
T  108834 attgtcgaggagtcttagcggtgttgtcgagtagttgcatgagtcgtcgttgttggt 108778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 81437 - 81477
Alignment:
Q  349 ggagtcttagaggtgttgtcacgtcattgcatgagtcgttg 389  Q
    |||||||||  |||||||||| |||||||||||||||||||    
T  81437 ggagtcttaatggtgttgtcaagtcattgcatgagtcgttg 81477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University