View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_525 (Length: 239)

Name: NF10145A_low_525
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_525
NF10145A_low_525
[»] chr5 (61 HSPs)
chr5 (11-220)||(25853595-25853805)
chr5 (11-220)||(25847014-25847224)
chr5 (24-220)||(17938102-17938298)
chr5 (24-161)||(22247516-22247653)
chr5 (11-159)||(30781746-30781894)
chr5 (24-218)||(14614172-14614366)
chr5 (24-220)||(11995833-11996030)
chr5 (16-220)||(37539175-37539380)
chr5 (24-218)||(19799563-19799757)
chr5 (11-217)||(29745817-29746023)
chr5 (16-220)||(37546719-37546924)
chr5 (24-161)||(24799660-24799797)
chr5 (24-218)||(1110901-1111095)
chr5 (24-161)||(38014428-38014565)
chr5 (24-220)||(7507230-7507428)
chr5 (24-217)||(22508250-22508443)
chr5 (24-218)||(33536786-33536980)
chr5 (24-217)||(22501669-22501862)
chr5 (11-218)||(37575166-37575373)
chr5 (26-198)||(5581531-5581703)
chr5 (24-198)||(15462163-15462337)
chr5 (19-136)||(14881617-14881734)
chr5 (19-136)||(14888294-14888411)
chr5 (24-97)||(24008745-24008818)
chr5 (11-218)||(20991029-20991236)
chr5 (24-218)||(19508858-19509053)
chr5 (24-97)||(40010316-40010389)
chr5 (49-136)||(39608177-39608264)
chr5 (48-218)||(7772869-7773039)
chr5 (24-97)||(18894339-18894412)
chr5 (24-94)||(5455181-5455251)
chr5 (24-94)||(43029734-43029804)
chr5 (49-139)||(22380249-22380339)
chr5 (24-94)||(20347833-20347905)
chr5 (24-136)||(25420562-25420674)
chr5 (82-217)||(598010-598145)
chr5 (24-218)||(26651133-26651328)
chr5 (24-218)||(26922718-26922913)
chr5 (24-94)||(18567282-18567352)
chr5 (24-94)||(20341229-20341301)
chr5 (48-136)||(19801201-19801289)
chr5 (24-94)||(10686836-10686907)
chr5 (24-95)||(28259270-28259341)
chr5 (24-97)||(16774397-16774470)
chr5 (24-95)||(5337699-5337770)
chr5 (48-95)||(21677586-21677633)
chr5 (24-95)||(22175793-22175864)
chr5 (48-95)||(22499896-22499943)
chr5 (24-95)||(24058336-24058407)
chr5 (49-99)||(19363342-19363392)
chr5 (24-94)||(23081351-23081421)
chr5 (48-136)||(27635159-27635247)
chr5 (24-67)||(597966-598009)
chr5 (48-95)||(9776283-9776330)
chr5 (48-95)||(17270595-17270642)
chr5 (48-95)||(20938404-20938451)
chr5 (24-94)||(18940561-18940631)
chr5 (24-94)||(23075638-23075708)
chr5 (158-218)||(23081226-23081287)
chr5 (192-220)||(16774274-16774302)
chr5 (158-218)||(19799093-19799153)
[»] chr4 (49 HSPs)
chr4 (11-220)||(29381958-29382168)
chr4 (11-220)||(44656962-44657172)
chr4 (11-220)||(44662883-44663101)
chr4 (24-217)||(5939616-5939810)
chr4 (24-217)||(45141744-45141938)
chr4 (11-218)||(23435176-23435383)
chr4 (11-218)||(39265456-39265663)
chr4 (24-218)||(26396379-26396572)
chr4 (24-161)||(11937863-11938000)
chr4 (24-218)||(21397507-21397700)
chr4 (11-217)||(42955242-42955448)
chr4 (24-220)||(20890058-20890255)
chr4 (24-198)||(391858-392032)
chr4 (24-218)||(3259188-3259382)
chr4 (28-220)||(20895689-20895882)
chr4 (11-217)||(52501228-52501434)
chr4 (24-218)||(31665741-31665935)
chr4 (24-97)||(29454677-29454750)
chr4 (24-220)||(33222033-33222230)
chr4 (24-217)||(47870258-47870451)
chr4 (18-187)||(7359933-7360102)
chr4 (24-97)||(29447993-29448066)
chr4 (24-139)||(45959018-45959133)
chr4 (18-218)||(1584594-1584794)
chr4 (24-224)||(19127531-19127733)
chr4 (24-94)||(3265940-3266010)
chr4 (49-136)||(42221148-42221235)
chr4 (24-187)||(47871658-47871821)
chr4 (24-94)||(50082911-50082981)
chr4 (24-218)||(33097785-33097980)
chr4 (11-141)||(17177112-17177242)
chr4 (24-95)||(21882284-21882355)
chr4 (24-139)||(54825449-54825564)
chr4 (49-136)||(900311-900398)
chr4 (24-95)||(13480327-13480398)
chr4 (24-95)||(16445713-16445784)
chr4 (24-95)||(23724119-23724190)
chr4 (48-95)||(40909221-40909268)
chr4 (48-95)||(41799270-41799317)
chr4 (48-95)||(42702037-42702084)
chr4 (48-95)||(51601391-51601438)
chr4 (48-95)||(51607272-51607319)
chr4 (24-94)||(49240165-49240235)
chr4 (24-94)||(49748879-49748949)
chr4 (48-95)||(635081-635128)
chr4 (48-95)||(23122410-23122457)
chr4 (48-95)||(53748073-53748119)
chr4 (158-218)||(21882418-21882477)
chr4 (163-218)||(30396980-30397035)
[»] chr7 (61 HSPs)
chr7 (24-220)||(643292-643489)
chr7 (24-220)||(12399072-12399267)
chr7 (24-220)||(42059297-42059493)
chr7 (24-161)||(1318510-1318647)
chr7 (24-217)||(20018908-20019101)
chr7 (11-218)||(2025457-2025664)
chr7 (24-146)||(21758037-21758159)
chr7 (11-161)||(32628134-32628286)
chr7 (24-218)||(8196433-8196627)
chr7 (24-217)||(49159507-49159700)
chr7 (24-220)||(2281830-2282028)
chr7 (49-218)||(13453034-13453203)
chr7 (24-145)||(40922228-40922349)
chr7 (24-218)||(13963237-13963431)
chr7 (49-218)||(49151356-49151525)
chr7 (49-218)||(49158046-49158215)
chr7 (18-218)||(15632098-15632297)
chr7 (24-217)||(2439627-2439820)
chr7 (24-97)||(30602216-30602289)
chr7 (24-198)||(11879810-11879984)
chr7 (11-218)||(11340471-11340678)
chr7 (18-208)||(18436434-18436623)
chr7 (24-94)||(33405396-33405466)
chr7 (24-94)||(26089308-26089378)
chr7 (24-94)||(40684119-40684189)
chr7 (24-94)||(48987278-48987348)
chr7 (24-136)||(13026657-13026769)
chr7 (24-94)||(750587-750657)
chr7 (24-94)||(26119730-26119799)
chr7 (24-136)||(13020450-13020562)
chr7 (24-136)||(16843187-16843299)
chr7 (34-94)||(37288221-37288281)
chr7 (70-141)||(81376-81447)
chr7 (19-141)||(14168829-14168951)
chr7 (19-141)||(14173076-14173198)
chr7 (24-94)||(26113113-26113183)
chr7 (24-135)||(23521725-23521836)
chr7 (24-95)||(14280978-14281049)
chr7 (24-94)||(2387937-2388007)
chr7 (24-113)||(46175064-46175153)
chr7 (48-136)||(15085244-15085332)
chr7 (24-139)||(11898623-11898738)
chr7 (24-95)||(14287444-14287515)
chr7 (24-95)||(15839348-15839419)
chr7 (48-95)||(20579285-20579332)
chr7 (48-136)||(26289052-26289140)
chr7 (48-95)||(806318-806365)
chr7 (48-95)||(11631260-11631307)
chr7 (48-95)||(15722535-15722582)
chr7 (48-95)||(18048550-18048597)
chr7 (48-95)||(18055029-18055076)
chr7 (48-95)||(23200817-23200864)
chr7 (48-95)||(23506944-23506991)
chr7 (48-95)||(23665143-23665190)
chr7 (48-95)||(29796533-29796580)
chr7 (48-95)||(29800352-29800399)
chr7 (24-94)||(5186601-5186671)
chr7 (70-135)||(16184738-16184803)
chr7 (70-98)||(11219448-11219476)
chr7 (11-91)||(15142968-15143048)
chr7 (158-218)||(15839482-15839541)
[»] chr3 (69 HSPs)
chr3 (24-220)||(16413510-16413707)
chr3 (24-220)||(30099580-30099776)
chr3 (24-218)||(50142000-50142193)
chr3 (24-208)||(47121872-47122056)
chr3 (24-208)||(47129240-47129424)
chr3 (24-217)||(48773849-48774042)
chr3 (24-220)||(51477581-51477778)
chr3 (11-208)||(14844403-14844600)
chr3 (24-218)||(28759594-28759788)
chr3 (24-218)||(38743639-38743833)
chr3 (24-161)||(50655295-50655432)
chr3 (24-161)||(51246470-51246607)
chr3 (24-159)||(29494281-29494416)
chr3 (24-220)||(3781976-3782175)
chr3 (24-220)||(16330843-16331040)
chr3 (11-218)||(9690699-9690906)
chr3 (24-220)||(6926847-6927034)
chr3 (24-198)||(10768483-10768657)
chr3 (24-198)||(45612381-45612555)
chr3 (24-217)||(53871877-53872070)
chr3 (24-97)||(21352911-21352984)
chr3 (24-208)||(21150726-21150911)
chr3 (120-220)||(3552883-3552984)
chr3 (24-218)||(9771149-9771344)
chr3 (24-99)||(10382666-10382741)
chr3 (24-99)||(10411319-10411394)
chr3 (48-220)||(891757-891930)
chr3 (11-218)||(15375357-15375565)
chr3 (24-136)||(49163892-49164004)
chr3 (24-94)||(2498397-2498467)
chr3 (49-136)||(12724444-12724531)
chr3 (24-95)||(20376595-20376666)
chr3 (24-95)||(30596212-30596283)
chr3 (24-97)||(54091086-54091159)
chr3 (158-218)||(19343497-19343557)
chr3 (49-139)||(54832519-54832609)
chr3 (24-113)||(43723398-43723487)
chr3 (24-113)||(53570567-53570656)
chr3 (48-95)||(4677972-4678019)
chr3 (48-91)||(12201011-12201054)
chr3 (24-95)||(13910316-13910387)
chr3 (24-95)||(13940772-13940843)
chr3 (48-95)||(14652067-14652114)
chr3 (48-95)||(41176285-41176332)
chr3 (48-95)||(41181423-41181470)
chr3 (24-95)||(46070463-46070534)
chr3 (24-94)||(11955950-11956020)
chr3 (28-94)||(16833961-16834027)
chr3 (24-218)||(18961686-18961880)
chr3 (38-95)||(13947275-13947332)
chr3 (48-95)||(16829295-16829342)
chr3 (189-220)||(16834122-16834153)
chr3 (48-95)||(16837817-16837864)
chr3 (24-95)||(29551662-29551732)
chr3 (24-95)||(32387371-32387441)
chr3 (48-95)||(44776011-44776058)
chr3 (48-95)||(44781195-44781242)
chr3 (70-136)||(11939197-11939263)
chr3 (24-94)||(11963504-11963574)
chr3 (49-99)||(12153666-12153716)
chr3 (41-95)||(12256365-12256419)
chr3 (190-220)||(27028956-27028986)
chr3 (190-220)||(27034077-27034107)
chr3 (19-136)||(11644102-11644219)
chr3 (19-95)||(8742232-8742308)
chr3 (19-95)||(8760402-8760478)
chr3 (163-218)||(11955826-11955881)
chr3 (11-99)||(12537053-12537141)
chr3 (49-97)||(18756285-18756333)
[»] chr1 (44 HSPs)
chr1 (11-220)||(20276428-20276638)
chr1 (24-218)||(20076124-20076317)
chr1 (24-161)||(37676149-37676286)
chr1 (24-161)||(37682820-37682957)
chr1 (24-161)||(39188913-39189050)
chr1 (19-143)||(38907307-38907431)
chr1 (24-218)||(48428595-48428789)
chr1 (11-218)||(19045481-19045687)
chr1 (24-218)||(42626941-42627135)
chr1 (24-201)||(9292444-9292621)
chr1 (24-208)||(18025940-18026125)
chr1 (11-218)||(17150047-17150254)
chr1 (24-217)||(18418869-18419062)
chr1 (24-218)||(28555681-28555875)
chr1 (27-217)||(4231935-4232125)
chr1 (24-217)||(39095066-39095259)
chr1 (24-94)||(20571486-20571556)
chr1 (24-91)||(29150542-29150609)
chr1 (24-94)||(6741261-6741331)
chr1 (24-94)||(31534603-31534673)
chr1 (24-94)||(31563320-31563390)
chr1 (24-94)||(36211353-36211423)
chr1 (24-97)||(20396173-20396246)
chr1 (24-218)||(36917859-36918055)
chr1 (24-94)||(20300052-20300122)
chr1 (24-95)||(29601592-29601663)
chr1 (24-136)||(47484849-47484962)
chr1 (11-139)||(21963736-21963864)
chr1 (24-95)||(21921538-21921609)
chr1 (49-95)||(24237733-24237779)
chr1 (19-95)||(20837550-20837626)
chr1 (48-141)||(24108291-24108384)
chr1 (48-136)||(24080357-24080445)
chr1 (48-95)||(22434281-22434328)
chr1 (63-208)||(41052524-41052670)
chr1 (48-94)||(20293446-20293491)
chr1 (19-95)||(20823739-20823815)
chr1 (48-95)||(20595438-20595485)
chr1 (163-218)||(24237611-24237666)
chr1 (48-95)||(27281003-27281050)
chr1 (48-99)||(36615695-36615746)
chr1 (24-95)||(49328775-49328846)
chr1 (190-220)||(20396094-20396124)
chr1 (70-136)||(21735951-21736017)
[»] chr8 (61 HSPs)
chr8 (24-220)||(4519920-4520116)
chr8 (18-217)||(23117915-23118115)
chr8 (24-218)||(9204544-9204737)
chr8 (48-220)||(22458865-22459037)
chr8 (24-218)||(6588812-6589006)
chr8 (24-218)||(7003263-7003457)
chr8 (24-220)||(27908781-27908979)
chr8 (24-220)||(27955200-27955398)
chr8 (11-218)||(28981458-28981665)
chr8 (11-218)||(28986678-28986885)
chr8 (11-146)||(3223948-3224083)
chr8 (24-220)||(12913442-12913640)
chr8 (24-161)||(1051384-1051521)
chr8 (24-218)||(14766332-14766526)
chr8 (24-218)||(27346406-27346600)
chr8 (56-218)||(27364074-27364236)
chr8 (24-218)||(852207-852401)
chr8 (11-218)||(25700807-25701014)
chr8 (24-218)||(214689-214883)
chr8 (24-218)||(237371-237565)
chr8 (24-218)||(728312-728506)
chr8 (24-218)||(800813-801007)
chr8 (24-218)||(807229-807423)
chr8 (24-97)||(14736134-14736207)
chr8 (11-218)||(29328925-29329132)
chr8 (24-94)||(10947920-10947990)
chr8 (24-94)||(16886614-16886684)
chr8 (24-135)||(14415849-14415960)
chr8 (24-91)||(26485340-26485407)
chr8 (28-217)||(35541745-35541934)
chr8 (24-94)||(10956002-10956072)
chr8 (24-94)||(14745835-14745905)
chr8 (24-94)||(23224014-23224084)
chr8 (24-216)||(12303936-12304128)
chr8 (24-96)||(11391920-11391992)
chr8 (70-141)||(14594030-14594101)
chr8 (24-139)||(43688131-43688246)
chr8 (24-94)||(40143657-40143727)
chr8 (56-198)||(37240354-37240496)
chr8 (24-94)||(16266185-16266255)
chr8 (158-218)||(29298267-29298327)
chr8 (158-218)||(29304822-29304882)
chr8 (11-94)||(27890613-27890696)
chr8 (11-94)||(27896946-27897029)
chr8 (11-94)||(27902852-27902935)
chr8 (11-94)||(27949271-27949354)
chr8 (24-139)||(19297264-19297378)
chr8 (24-99)||(29298390-29298465)
chr8 (24-91)||(29304949-29305015)
chr8 (40-93)||(1803834-1803887)
chr8 (48-95)||(18680847-18680894)
chr8 (48-95)||(22062905-22062952)
chr8 (48-94)||(9272502-9272548)
chr8 (190-220)||(27890793-27890823)
chr8 (190-220)||(27897126-27897156)
chr8 (190-220)||(27903032-27903062)
chr8 (190-220)||(27949451-27949481)
chr8 (24-94)||(31418008-31418078)
chr8 (24-93)||(20011443-20011512)
chr8 (19-95)||(31567155-31567231)
chr8 (19-95)||(31572376-31572452)
[»] chr2 (37 HSPs)
chr2 (11-218)||(27037975-27038181)
chr2 (24-161)||(21605490-21605627)
chr2 (24-220)||(1062446-1062643)
chr2 (24-220)||(1067840-1068037)
chr2 (24-161)||(11359494-11359631)
chr2 (24-143)||(4070809-4070928)
chr2 (24-161)||(24480849-24480986)
chr2 (24-218)||(70707-70901)
chr2 (24-220)||(31829358-31829556)
chr2 (24-220)||(31834710-31834908)
chr2 (24-220)||(2385115-2385311)
chr2 (24-220)||(24426034-24426230)
chr2 (18-218)||(34790-34990)
chr2 (24-217)||(11466765-11466958)
chr2 (24-220)||(36983756-36983954)
chr2 (11-217)||(27272881-27273087)
chr2 (24-198)||(4078165-4078339)
chr2 (56-218)||(23887586-23887748)
chr2 (24-217)||(44090284-44090477)
chr2 (24-99)||(20850935-20851010)
chr2 (24-208)||(27730232-27730417)
chr2 (24-218)||(14564572-14564768)
chr2 (50-218)||(22012332-22012500)
chr2 (24-95)||(15642613-15642684)
chr2 (24-94)||(17591857-17591927)
chr2 (24-113)||(30195812-30195901)
chr2 (48-95)||(27786505-27786552)
chr2 (48-95)||(27791726-27791773)
chr2 (19-99)||(25174643-25174724)
chr2 (26-95)||(32910805-32910874)
chr2 (48-95)||(10684955-10685002)
chr2 (48-95)||(12573120-12573167)
chr2 (48-95)||(12579602-12579649)
chr2 (48-95)||(27295323-27295370)
chr2 (24-95)||(36801298-36801369)
chr2 (70-136)||(28970552-28970618)
chr2 (11-95)||(25267970-25268054)
[»] chr6 (33 HSPs)
chr6 (24-218)||(15331332-15331525)
chr6 (24-218)||(17310408-17310601)
chr6 (11-146)||(25314929-25315064)
chr6 (11-146)||(26202423-26202558)
chr6 (24-220)||(19095998-19096194)
chr6 (24-220)||(29159760-29159956)
chr6 (24-218)||(93729-93923)
chr6 (24-217)||(8068907-8069100)
chr6 (11-136)||(25559216-25559341)
chr6 (24-218)||(29926437-29926631)
chr6 (24-220)||(17882013-17882209)
chr6 (11-220)||(34133175-34133385)
chr6 (24-97)||(30799019-30799092)
chr6 (24-94)||(16222994-16223064)
chr6 (24-94)||(24363308-24363378)
chr6 (24-94)||(24369899-24369969)
chr6 (24-94)||(25464583-25464653)
chr6 (24-135)||(17207040-17207151)
chr6 (24-95)||(10470070-10470141)
chr6 (158-220)||(10463429-10463492)
chr6 (24-95)||(13127618-13127689)
chr6 (70-141)||(18786899-18786970)
chr6 (24-94)||(10463556-10463626)
chr6 (70-139)||(19468650-19468719)
chr6 (49-97)||(27768127-27768174)
chr6 (48-95)||(1593539-1593586)
chr6 (49-136)||(12446497-12446584)
chr6 (48-95)||(14033952-14033999)
chr6 (48-95)||(14581333-14581380)
chr6 (48-95)||(19727416-19727463)
chr6 (48-95)||(21724077-21724124)
chr6 (48-99)||(23020698-23020749)
chr6 (19-95)||(23835836-23835912)
[»] scaffold0066 (1 HSPs)
scaffold0066 (93-220)||(3093-3221)
[»] scaffold0214 (1 HSPs)
scaffold0214 (24-217)||(14444-14637)
[»] scaffold0652 (1 HSPs)
scaffold0652 (11-220)||(2000-2210)
[»] scaffold0466 (1 HSPs)
scaffold0466 (24-217)||(11833-12026)
[»] scaffold0320 (1 HSPs)
scaffold0320 (11-215)||(1625-1829)
[»] scaffold0041 (1 HSPs)
scaffold0041 (24-145)||(50746-50867)
[»] scaffold0276 (1 HSPs)
scaffold0276 (24-220)||(21303-21501)
[»] scaffold0068 (2 HSPs)
scaffold0068 (11-218)||(51078-51285)
scaffold0068 (11-218)||(64526-64733)
[»] scaffold0310 (1 HSPs)
scaffold0310 (48-218)||(16840-17010)
[»] scaffold0555 (1 HSPs)
scaffold0555 (109-218)||(1-109)
[»] scaffold0457 (1 HSPs)
scaffold0457 (24-217)||(11450-11643)
[»] scaffold0155 (1 HSPs)
scaffold0155 (24-218)||(31566-31761)
[»] scaffold0113 (2 HSPs)
scaffold0113 (24-218)||(19955-20149)
scaffold0113 (48-218)||(15881-16051)
[»] scaffold0019 (1 HSPs)
scaffold0019 (49-218)||(137844-138014)
[»] scaffold0560 (1 HSPs)
scaffold0560 (24-181)||(280-437)
[»] scaffold0443 (1 HSPs)
scaffold0443 (24-99)||(14151-14226)
[»] scaffold0154 (1 HSPs)
scaffold0154 (24-94)||(17765-17835)
[»] scaffold0088 (1 HSPs)
scaffold0088 (49-207)||(32339-32497)
[»] scaffold0523 (1 HSPs)
scaffold0523 (24-94)||(7065-7135)
[»] scaffold0363 (1 HSPs)
scaffold0363 (24-135)||(2748-2859)
[»] scaffold0089 (1 HSPs)
scaffold0089 (24-94)||(17871-17941)
[»] scaffold1026 (1 HSPs)
scaffold1026 (29-94)||(1-66)
[»] scaffold0434 (1 HSPs)
scaffold0434 (48-141)||(631-724)
[»] scaffold0076 (1 HSPs)
scaffold0076 (27-136)||(805-914)
[»] scaffold0093 (5 HSPs)
scaffold0093 (24-136)||(25389-25501)
scaffold0093 (24-136)||(36057-36169)
scaffold0093 (157-220)||(25522-25586)
scaffold0093 (157-220)||(36190-36254)
scaffold0093 (157-220)||(42597-42661)
[»] scaffold0022 (1 HSPs)
scaffold0022 (24-139)||(105030-105145)
[»] scaffold0556 (1 HSPs)
scaffold0556 (11-141)||(4286-4416)
[»] scaffold0001 (2 HSPs)
scaffold0001 (24-94)||(511931-512001)
scaffold0001 (49-99)||(179758-179808)
[»] scaffold0003 (2 HSPs)
scaffold0003 (11-88)||(160846-160923)
scaffold0003 (190-220)||(160714-160744)
[»] scaffold0190 (1 HSPs)
scaffold0190 (24-95)||(19466-19537)
[»] scaffold0191 (1 HSPs)
scaffold0191 (24-218)||(10496-10689)
[»] scaffold0583 (2 HSPs)
scaffold0583 (24-94)||(262-332)
scaffold0583 (158-218)||(396-456)
[»] scaffold0118 (1 HSPs)
scaffold0118 (48-94)||(7931-7977)
[»] scaffold0037 (1 HSPs)
scaffold0037 (25-135)||(100971-101081)
[»] scaffold0009 (3 HSPs)
scaffold0009 (158-218)||(247886-247947)
scaffold0009 (24-99)||(247752-247827)
scaffold0009 (158-218)||(254398-254459)
[»] scaffold0516 (1 HSPs)
scaffold0516 (70-141)||(6974-7045)
[»] scaffold0103 (2 HSPs)
scaffold0103 (24-95)||(20349-20420)
scaffold0103 (24-95)||(23164-23235)
[»] scaffold0035 (1 HSPs)
scaffold0035 (40-95)||(162-217)
[»] scaffold0026 (1 HSPs)
scaffold0026 (40-95)||(62541-62596)
[»] scaffold0025 (2 HSPs)
scaffold0025 (48-95)||(71891-71938)
scaffold0025 (70-141)||(77545-77616)
[»] scaffold0239 (2 HSPs)
scaffold0239 (48-95)||(6533-6580)
scaffold0239 (48-95)||(13816-13863)
[»] scaffold0137 (1 HSPs)
scaffold0137 (148-218)||(25525-25595)
[»] scaffold0071 (1 HSPs)
scaffold0071 (48-95)||(50289-50336)
[»] scaffold0005 (1 HSPs)
scaffold0005 (48-95)||(259483-259530)
[»] scaffold0114 (1 HSPs)
scaffold0114 (70-136)||(47146-47212)
[»] scaffold0060 (2 HSPs)
scaffold0060 (49-94)||(41947-41992)
scaffold0060 (158-218)||(42056-42116)
[»] scaffold0078 (1 HSPs)
scaffold0078 (19-99)||(16759-16839)


Alignment Details
Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 25853595 - 25853805
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853595 gatgaacatcagtacgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 25853694  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaact 209  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25853695 tatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaacccaatttccccaattctcaccaaaact 25853794  T
Q  210 ctgttaaacac 220  Q
    |||||||||||    
T  25853795 ctgttaaacac 25853805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 25847014 - 25847224
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25847014 gatgaacatcagtacgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttttg 25847113  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaact 209  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25847114 tatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaacccaatttccccaattctcaccaaaact 25847213  T
Q  210 ctgttaaacac 220  Q
    |||||||||||    
T  25847214 ctgttaaacac 25847224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 17938298 - 17938102
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  17938298 acgggcagaaacctggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 17938199  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| ||||||||  ||||||||||||||   |  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  17938198 cctatttctaacatcaaattcatgcttacaacttcaaaactacaatttcatcat-aaaacccaatttcccaaattctcaccaaaactctgttaaacac 17938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 22247653 - 22247516
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22247653 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 22247554  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  |||||||| |||||    
T  22247553 cctatttctaacatcaaattcatgcttacaacctcaaa 22247516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 30781746 - 30781894
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30781746 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactctccaaatcagtttacagatacaaattaactttctg 30781845  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttca 159  Q
    |||| ||||||||||||||||||||||||| ||||  ||||||||||||    
T  30781846 tatgcacttagaacctatttctaacaccaatttcatgcttacaacttca 30781894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 14614366 - 14614172
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14614366 acgggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaaacagtttacagatacaaattaactttctgtatgtacttagaa 14614267  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| |||||| || ||  ||||| | |||| ||  |||||| ||||||| || || | ||||||| |||||||||| |||||||||    
T  14614266 cctatttctaacatcaaatttacactcccaactccaaaatccacaatttcaacataaaacccaaaatccccaattttcaccaaaac-ctgttaaac 14614172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 11995833 - 11996030
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  11995833 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 11995931  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11995932 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacac 11996030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 37539380 - 37539175
Alignment:
Q  16 acatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatg 114  Q
    ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | ||||    
T  37539380 acatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatg 37539282  T
Q  115 tacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgt 213  Q
     |   |||||||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  37539281 caaccagaacctaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaacactctgt 37539182  T
Q  214 taaacac 220  Q
    |||||||    
T  37539181 taaacac 37539175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 19799757 - 19799563
Alignment:
Q  24 acgggcagaaaac-tgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttaga 122  Q
    ||||||||||||| || |||| || ||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||| |||||||    
T  19799757 acgggcagaaaacatgtttttccccaaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaattagctttctgtatgcacttaga 19799658  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||||||| |||| |||| || |||||| |||| |||||||| |||||||||| || || | ||||||| |||||||||| |||||||||    
T  19799657 acctatttctaacatcaaaatcacactcacaactccaaaatcatcattccatcataaaacccaaaatccccaattttcaccaaaac-ctgttaaac 19799563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 29746023 - 29745817
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||||||||||||||||| | |||| |  ||||||||||||||||||||  |||| ||||||||||||||||||||| || ||| ||| |||    
T  29746023 gatgaacatcagcacgggcagaaaacaggtttttctcaaaaatcccatttttcttcctttcaccccccaaatcagtttacagatataatttatcttgctg 29745924  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||||||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| |||||  |||||||||||||||||||||    
T  29745923 tatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaaccccaaaatcccaattctcaccaaaactc 29745824  T
Q  211 tgttaaa 217  Q
    | |||||    
T  29745823 tattaaa 29745817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 37546924 - 37546719
Alignment:
Q  16 acatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatg 114  Q
    ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | ||||    
T  37546924 acatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatg 37546826  T
Q  115 tacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgt 213  Q
     |   |||||||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||| |||||||    
T  37546825 caaccagaacctaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaactcaatttcccaaattctcaccaacactctgt 37546726  T
Q  214 taaacac 220  Q
    |||||||    
T  37546725 taaacac 37546719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 24799797 - 24799660
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24799797 acgggcagaaaactggttttactcaaaaatcccattttccttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 24799698  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  ||||||||| ||||    
T  24799697 cctatttctaacatcaaattcatgcttacaactccaaa 24799660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 1111095 - 1110901
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||    
T  1111095 acgggcagaaatctggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaattttctgtatacacttagaa 1110996  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  |||||||| || ||| |||  |||||| ||||||| || || | ||||||| | |||||||| |||||||||    
T  1110995 cctatttctaacatcaaattcatgcttacaacatcaaaactcacaatttcaacataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 1110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 38014428 - 38014565
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||| ||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  38014428 acgggcataaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 38014527  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  |||||||| |||||    
T  38014528 cctatttctaacatcaaattcatgcttacaacatcaaa 38014565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 7507428 - 7507230
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  7507428 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 7507330  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc--aattctcaccaaaactctgttaaacac 220  Q
    ||||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||||||    
T  7507329 acctaattctaaccccaaaatcaagcttacaacttcaaaatcatcattttatcataaaaacccattttccccaaattctcaccaacactctgttaaacac 7507230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 22508250 - 22508443
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||   |  |||||| ||||||| ||| ||||    
T  22508250 acgggcagaaaactggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtgagataacttactgtatgcactcagaa 22508349  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  22508350 cctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaacccctaaatcccaattctcaccaaaactctgttaaa 22508443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 33536786 - 33536980
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||||  ||||||||||  |||||| ||||||||||| ||||||||    
T  33536786 acgggcagaaaactggttttccccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtaaattagctttctgtatgcacttagaa 33536885  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||| || |||||| | ||| |||||||| || ||||||| || || |  ||||||  ||||||||| |||||||||    
T  33536886 cctatttctaacatcaaattcacactcacaactccaaaaatcatcattccaacataaaacccaaaatctccaatttccaccaaaac-ctgttaaac 33536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 22501669 - 22501862
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||  |||| ||  ||||||||||||||||||   ||||||||||||| |||||||||||   |  |||||| ||||||| ||| ||||    
T  22501669 acgggcagaaaactagtttttccccaaaatcccatttttcttcatttcactccccaaattagtttacagatgtgagataacttactgtatgcactcagaa 22501768  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  22501769 cctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaacccctaaatcccaattctcaccaaaactctgttaaa 22501862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 37575166 - 37575373
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||| | ||||  | ||||||||||||||||||||| ||||||| |||||  ||||||||||   | ||||||| |||    
T  37575166 gatgaacatcagtacgggcagaaaacaggttttttccaaaaatcccatttttcttccattcactccacaaattggtttacagatgtgagttaacttactg 37575265  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||||||||||||||||| || | ||||  |  ||||  |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||    
T  37575266 tatgcactcagaacctatttctaacatcagaatcacaatctcaaccccaaaatcatcatttcatcataaaaccccaaaatcccaattcactccaaaactc 37575365  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  37575366 tgttaaac 37575373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 5581703 - 5581531
Alignment:
Q  26 gggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaac 124  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||||    
T  5581703 gggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaac 5581605  T
Q  125 ctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    | | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  5581604 ccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 5581531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 15462163 - 15462337
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  15462163 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 15462261  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||| | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  15462262 acccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 15462337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 14881734 - 14881617
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    |||| |||| |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |      
T  14881734 tcagtacggccagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaattaacttcctgtatgcaac 14881635  T
Q  119 tagaacctatttctaaca 136  Q
    | ||||||||||||||||    
T  14881634 tggaacctatttctaaca 14881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 14888411 - 14888294
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    |||| |||| |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |      
T  14888411 tcagtacggccagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaattaacttcctgtatgcaac 14888312  T
Q  119 tagaacctatttctaaca 136  Q
    | ||||||||||||||||    
T  14888311 tggaacctatttctaaca 14888294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 24008745 - 24008818
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24008745 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 24008818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 20991029 - 20991236
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| ||||||||||||||||||||||||||  | |||||||  ||    
T  20991029 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagatatgagttaacttgttg 20991128  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||  ||| ||||||||||||||||| ||||   ||  || | ||| ||||||||||||||| ||| |||| ||  | | ||||||| ||||||||||||    
T  20991129 tatacactcagaacctatttctaacatcaaaacaacaattcctactccaaattcatcatttcttcacaaaacccataatccccaattttcaccaaaactc 20991228  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  20991229 tgttaaac 20991236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 19508858 - 19509053
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | | | |||| |   |||    
T  19508858 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataaataagtgt-tctatgcaaccaga 19508956  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc--aatttcccaattctcaccaaaactctgttaaac 218  Q
    | ||| |||||||| |||| |||   |||||||||| ||||| |||||| ||||||||| |||  ||| ||| | ||||||||||||| |||||||||    
T  19508957 aactaattctaacatcaaaatcatgtttacaacttcgaattcctcattttatcataaaaccccaaaatctccaatttctcaccaaaac-ctgttaaac 19509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 40010389 - 40010316
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40010389 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactcccaaaatcagtttacagataca 40010316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 39608264 - 39608177
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||  ||||||||| ||||||  |||||||||||||||||||||    
T  39608264 aaaatcccatttttcttcaattcactccccaaatcagtttacagataagaattaacttgctgtatacacttagaacctatttctaaca 39608177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 7773039 - 7772869
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcact 147  Q
    ||||||| |||||| || ||| ||||||||||||||||||||| ||||  | ||||||| ||||||  ||| ||||||||||||||||| ||||   ||     
T  7773039 aaaaatctcattttcctcccattcactccccaaatcagtttacggatatgagttaacttactgtatacactcagaacctatttctaacatcaaaacaaca 7772940  T
Q  148 cttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
     || | ||||||||||||||||||| ||| |||| ||  | | ||||||| ||||||||||||||||||||    
T  7772939 attcctacttcaaattcatcatttcttcacaaaacccataatccccaattttcaccaaaactctgttaaac 7772869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 18894412 - 18894339
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18894412 acgggcagaaaactggttttacccaaaaatcccattttccttccaatgactccccaaatcagtttacagataca 18894339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 5455181 - 5455251
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5455181 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 5455251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 43029734 - 43029804
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  43029734 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 43029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 22380249 - 22380339
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacacca 139  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||  ||||||||| ||||||  ||| | ||||||||||||||||||    
T  22380249 aaaatcccatttttctccaattcactccccaaatcagtttacagatatgaattaacttactgtatacactcaaaacctatttctaacacca 22380339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 20347833 - 20347905
Alignment:
Q  24 acgggcagaaaactgatttta--cctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| ||||   || |||||||||||||||||||||||||||||||||||||||||||||||    
T  20347833 acgggcagaaaactggtttttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 20347905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 25420562 - 25420674
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||| || | |||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||   |||||||| ||||||  ||| ||||    
T  25420562 acgggcagaacacgggtttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagatatggattaacttgctgtatacactcagaa 25420661  T
Q  124 cctatttctaaca 136  Q
    |||||||||||||    
T  25420662 cctatttctaaca 25420674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 598010 - 598145
Alignment:
Q  82 tcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaa 181  Q
    |||||||||||||| || ||||||| ||||||  ||| |||||| |||| ||||| |||| |||| || |||||| |||||||| || |||| |||||||    
T  598010 tcagtttacagatataagttaacttgctgtatacactcagaacccatttttaacatcaaaatcacactcacaactccaaattcaacaattcaacataaaa 598109  T
Q  182 acccaatttcccaattctcaccaaaactctgttaaa 217  Q
     | |||  ||||||||||||| | ||||||||||||    
T  598110 tctcaaaatcccaattctcactacaactctgttaaa 598145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 26651133 - 26651328
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| ||||||||||||  | |||||||  |||||  ||| ||||    
T  26651133 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatatgagttaacttgttgtattcactcagaa 26651232  T
Q  124 cctatttctaacaccaaattcactct-tacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||| | || |   ||  | || | |  |||| |||||||||||||| |||| ||  | | ||||||||||||||||||||||||||||    
T  26651233 cctatttctaatatcagaacaacaatctatacccccaaaatcatcatttcatcacaaaacccataatccccaattctcaccaaaactctgttaaac 26651328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 26922718 - 26922913
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| ||||||||||||  | |||||||  |||||  ||| ||||    
T  26922718 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatatgagttaacttgttgtattcactcagaa 26922817  T
Q  124 cctatttctaacaccaaattcactct-tacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||| | || |   ||  | || | |  |||| |||||||||||||| |||| ||  | | ||||||||||||||||||||||||||||    
T  26922818 cctatttctaatatcagaacaacaatctatacccccaaaatcatcatttcatcacaaaacccataatccccaattctcaccaaaactctgttaaac 26922913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 18567282 - 18567352
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| || ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18567282 acgggcagaaaacaggtttttcccaaaaatcccatttttcttcaaatcactccccaaattagtttacagat 18567352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 20341229 - 20341301
Alignment:
Q  24 acgggcagaaaactgatttta--cctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| ||||   || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  20341229 acgggcagaaaactggtttttttcccaaaaatctcatttttcttccaatcactccccaaatcagtttacagat 20341301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 19801289 - 19801201
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||||   ||||||||| ||||||  ||| |||||||||||||||||    
T  19801289 aaaaatcccatttttctccaattcactccccaaattagtttacagatgtgaattaacttgctgtatacactcagaacctatttctaaca 19801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 10686836 - 10686907
Alignment:
Q  24 acgggcagaaaactgattttacctaaaa-atcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||| ||||||||| |||| || |||| |||||||||| || |||||||||||||||||||||||||||||    
T  10686836 acgggtagaaaactggtttttcccaaaaaatcccattttcctcccaatcactccccaaatcagtttacagat 10686907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 28259341 - 28259270
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  ||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  28259341 acgggcagaaaacaggtttttccccaaaattccatttttcttcaaatcactccccaaattagtttacagata 28259270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 16774470 - 16774397
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||| | ||||  |  |||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  16774470 acgggcagaaaacgggttttttcccaaaatctcatttttcttcaaatcactccccaaattagtttacagataca 16774397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 5337770 - 5337699
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||||||| || |||||||||||||| ||   | ||||| ||||||| ||||||||||||    
T  5337770 acgggcagaaaactgatttttcccaaaaatcccattttcctctaattcacttcccaaattagtttacagata 5337699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 21677633 - 21677586
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  21677633 aaaaatcccatttttcctccattcactccccaaattagtttacagata 21677586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 22175793 - 22175864
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||  | |||||| || |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  22175793 acgggcagaatgcagatttttcccaaaaatcccatttttcctcaattcactccccaaattagtttacagata 22175864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 22499943 - 22499896
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  22499943 aaaaatcccatttttctccaattcactccccaaatcagtttacagata 22499896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 24058336 - 24058407
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||| || | |||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||    
T  24058336 acgggcagaacacaggtttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagata 24058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 19363342 - 19363392
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||| ||||    
T  19363342 aaaatcccatttttcttcaattcactccccaaattagtttacagatgcaaa 19363392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 23081421 - 23081351
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  23081421 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagttaacagat 23081351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 27635247 - 27635159
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||| || | | |||||||||||||   |||||||||   || ||||||  |||||||||| |||||||||||||||||    
T  27635247 aaaaatcccattttcctccaattcactccccaaattgatttacagatgtgaaataacttgatgtatgtactcagaacctatttctaaca 27635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 597966 - 598009
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttcc 67  Q
    ||||||||||||||| |||| || ||||||||||||||||||||    
T  597966 acgggcagaaaactggtttttcccaaaaatcccatttttcttcc 598009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 9776283 - 9776330
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  9776283 aaaaatcccatttttcctcgattcactccccaaattagtttacagata 9776330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 17270642 - 17270595
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  17270642 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 17270595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 20938404 - 20938451
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  20938404 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 20938451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 18940631 - 18940561
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||| ||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  18940631 acgggcaaaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagttaacagat 18940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 23075708 - 23075638
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||  | |||| ||  |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  23075708 acgggcagaaaataggtttttccccaaaatcccatttttcttcaattcactccccaaattagttaacagat 23075638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 23081287 - 23081226
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcacc-aaaactctgttaaac 218  Q
    |||| |||||||||||||| |||| || || | ||||||||||||| |||||||||||||||    
T  23081287 caaaatcatcatttcatcacaaaatccaaaatccccaattctcaccaaaaactctgttaaac 23081226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 16774302 - 16774274
Alignment:
Q  192 ccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||    
T  16774302 ccaattctcaccaaaactctgttaaacac 16774274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 19799153 - 19799093
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| |||| ||  | |||||||||||||||||||  |||||||||    
T  19799153 caaaatcatcatttcatcacaaaacccataattcccaattctcaccaaaaacctgttaaac 19799093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 29382168 - 29381958
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29382168 gatgaacatcagtacgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 29382069  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaact 209  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29382068 tatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaacccaatttccccaattctcaccaaaact 29381969  T
Q  210 ctgttaaacac 220  Q
    |||||||||||    
T  29381968 ctgttaaacac 29381958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 44657172 - 44656962
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44657172 gatgaacatcagtacgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacatatacaaattaactttctg 44657073  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaact 209  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  44657072 tatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaatccaatttccccaattctcaccaaaact 44656973  T
Q  210 ctgttaaacac 220  Q
    |||||||||||    
T  44656972 ctgttaaacac 44656962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 44663101 - 44662883
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  44663101 gatgaacatcagtacgggcagaaaactggttttacccaaaaatcccatttttcttctaatcactccctaaatcagtttacagatacaaattaactttctg 44663002  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttca--------tcataaaaacccaattt-cccaattctca 201  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||    
T  44663001 tatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcatttcatcataaaaacccaatttccccaattctca 44662902  T
Q  202 ccaaaactctgttaaacac 220  Q
    |||||||||||||||||||    
T  44662901 ccaaaactctgttaaacac 44662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 5939616 - 5939810
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5939616 acgggcagaaaactggttttccccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaa 5939715  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcac-caaaactctgttaaa 217  Q
    ||||||||||||| | ||||||| || |||||| |||| ||| ||||||||||||||| |||||  | |||||||||||  ||||||||||||||    
T  5939716 cctatttctaacatcgaattcacactcacaactccaaaatcaacatttcatcataaaaccccaaaattccaattctcactaaaaactctgttaaa 5939810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 45141938 - 45141744
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||| ||||||||    
T  45141938 acgggcagaaaactgatttttctcaaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaattagctttctgtatgcacttagaa 45141839  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| ||||||||| || |||||| | ||| ||| ||||||||||||||| |||||  ||||||||||||| ||||||||||||||    
T  45141838 cctatttctaacatcaaattcacactcacaactccaaaaatcaacatttcatcataaaaccccaaaatcccaattctcactaaaactctgttaaa 45141744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 23435383 - 23435176
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23435383 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 23435284  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    |||||||||||||||||||||||||| |||||| || || |||||| | |||| ||  |||||| ||||||| || || | ||||||| ||||||||||     
T  23435283 tatgtacttagaacctatttctaacatcaaatttacactcacaactccaaaatccacaatttcaacataaaacccaaaatccccaattttcaccaaaac- 23435185  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  23435184 ctgttaaac 23435176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 39265663 - 39265456
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39265663 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttttg 39265564  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    |||||||||||||||||||||||||| ||||||||| || |||||| | |||| ||  |||||| ||||||| || || | ||||||| ||||||||||     
T  39265563 tatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccacaatttcaacataaaacccaaaatccccaattttcaccaaaac- 39265465  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  39265464 ctgttaaac 39265456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 26396379 - 26396572
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  26396379 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 26396478  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||||||||   |  |||||||||||||| || || | |||||||   |||||||| |||||||||    
T  26396479 cctatttctaacatcaaattcatgcttacaacttcaaaactacaatttcatcataaaacccaaaatccccaatttctaccaaaac-ctgttaaac 26396572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 11937863 - 11938000
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  11937863 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaa 11937962  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  11937963 cctatttctaacaccaaattcatgcttacaacttcaaa 11938000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 21397507 - 21397700
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||  ||| ||||    
T  21397507 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataatttaacttgctgtatacactcagaa 21397606  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    || |||||||||| ||||   || || |||||| |||||||| || |||| ||||||| |||||  |||||||| |||||||||| |||||||||    
T  21397607 cccatttctaacatcaaaactacactcacaactccaaattcaacaattcaacataaaatcccaaaatcccaattttcaccaaaac-ctgttaaac 21397700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 42955448 - 42955242
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||||||||||||||||| | |||| || ||||||||||||||||||||| |||||||||||||   ||||||| |   | ||||||| |||    
T  42955448 gatgaacatcagcacgggcagaaaacaggtttttcccaaaaatcccatttttcttccattcactccccaaattgatttacagttgtgagttaacttactg 42955349  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||||||||||||||||| |||| |||   |||||||| |||| ||| || |||| ||||||| |||||  | |||||||||||||||||||    
T  42955348 tatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatcaacacttcaccataaaaccccaaaattccaattctcaccaaaactc 42955249  T
Q  211 tgttaaa 217  Q
    |||||||    
T  42955248 tgttaaa 42955242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 20890058 - 20890255
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||| | |||||||||||||  ||||||||||   | ||||||| ||||||| ||| ||||    
T  20890058 acgggcagaaaactggtttttccccaaaatcccatttttcttcaattcactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaa 20890157  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| |||| |||   || ||||| |||| ||||| |||| |||||||| ||| || | ||||||||||||||||||||||||||||||    
T  20890158 cctatttctaacatcaaaatcatcattccaactccaaaatcatcttttcctcataaaaccccaaaatccccaattctcaccaaaactctgttaaacac 20890255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 391858 - 392032
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   | | |||| |   |||    
T  391858 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagggt-tctatgcaaccaga 391956  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||| | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  391957 acccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 392032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 3259382 - 3259188
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaact-ttctgtatgtacttag 121  Q
    ||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| | |||||  || |   ||    
T  3259382 acgggcagaaaactggtttttcccaaaaatctcatttttcttccaatcactccccaaattagtttacagatacataattaagtgttctg--tgcaaccag 3259285  T
Q  122 aacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    || ||| |||||||| ||| ||||  |||||||||||||| ||||||||| ||||||||| |||||  |||||||| ||||||||||| |||||||||    
T  3259284 aaactaattctaacatcaatttcatgcttacaacttcaaaatcatcattttatcataaaaccccaaaatcccaattcctcaccaaaac-ctgttaaac 3259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 20895689 - 20895882
Alignment:
Q  28 gcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaaccta 127  Q
    |||||||| || |||| ||  |||||||||||||||||| | |||||||||||||  ||||||||||   | ||||||| ||||||| ||| ||||||||    
T  20895689 gcagaaaattggtttttccccaaaatcccatttttcttcaattcactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaaccta 20895788  T
Q  128 tttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||| |||| |||   || ||||| |||| ||||| |||| |||||||| ||| || | ||||||||||||||||||||||||||||||    
T  20895789 tttctaacatcaaaatcatcattgcaactccaaaatcatcttttcctcataaaaccccaaaatccccaattctcaccaaaactctgttaaacac 20895882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 52501228 - 52501434
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttct 109  Q
    |||| ||||||| ||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | | |    
T  52501228 gatgaacatcagtacgggcagaaaactggtttttcccaaaaatctcatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-t 52501326  T
Q  110 gtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc-tcaccaaaac 208  Q
     |||| |   || | ||| |||||||| |||| |||   ||||||||||||| || |||||  ||||||||| ||||| |||||||||| ||||||||||    
T  52501327 ctatgcaaccaggaactaattctaacatcaaaatcatgtttacaacttcaaaatcctcattctatcataaaaccccaaattcccaattcttcaccaaaac 52501426  T
Q  209 tctgttaaa 217  Q
     ||||||||    
T  52501427 -ctgttaaa 52501434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 31665741 - 31665935
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||||||||| |||| |  ||||||||||||  ||||||||||   | ||||||| ||||||| ||| ||||    
T  31665741 acgggcagaaaacaggtttttccccaaaatcccattttccttcaatccactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaa 31665840  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| |||| |||    | ||||| |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||||||||||    
T  31665841 cctatttctaacatcaaaatcatcaattcaactccaaaatcatcatttcatcataaaatcccaaaatcccaattcactccaaaactctgttaaac 31665935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 29454750 - 29454677
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29454750 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 29454677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 33222033 - 33222230
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | |||||||||||||||||||||||||   | |||||||  |||||| ||| ||||    
T  33222033 acgggcagaaaacaggtttttcccgaaaatcccatttttcttcaattcactccccaaatcagtttacagatgtgagttaacttattgtatgcactcagaa 33222132  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaa-cccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| || | ||||  |  ||||  |||| |||||||||| ||| ||||| ||||| | ||||||| |||||| |||||||||||||||    
T  33222133 cctatttctaacatcagaatcacaatctcaaccccaaaatcatcatttcgtcacaaaaaccccaaatccccaattttcaccagaactctgttaaacac 33222230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 47870451 - 47870258
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  ||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||  ||| ||||    
T  47870451 acgggcagaaaactggtttttccccaaaatccaatttttcttccattcactccccaaatcagtttacagatgtaaattaacttactgtatacactcagaa 47870352  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| || |   ||  |    ||  |||| |||||||||||||| |||| |||||  ||||||||| | ||||||||||||||||    
T  47870351 cctatttctaacatcagaacaacaatctataccccaaaatcatcatttcatcacaaaaccccaaaatcccaattcactccaaaactctgttaaa 47870258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 7359933 - 7360102
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgta 116  Q
    ||||| ||||||||||||| | |||| || | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | ||||      
T  7359933 atcagtacgggcagaaaacaggtttttcccagaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcg 7360031  T
Q  117 cttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaa 187  Q
       |||||||| |||||||| |||| |||| ||||||||| |||| || |||||| ||||||||| |||||    
T  7360032 accagaacctaattctaacatcaaaatcacccttacaactccaaaatcctcattttatcataaaaccccaa 7360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 29448066 - 29447993
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29448066 acgggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaatcagtttacagataca 29447993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 45959133 - 45959018
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||  ||||| |||| ||||||  | | |||     
T  45959133 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaattagtttacagatgtaaattgacttgctgtatacattcagag 45959034  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  45959033 actatttctaacacca 45959018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 1584594 - 1584794
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgta 116  Q
    ||||| |||||||||||||   |||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| | | | |||| |    
T  1584594 atcagtacgggcagaaaacaagtttttcccagaaatcccatttttcttccaatcactccccaaattagtttacagatacataattaagtgt-tctatgca 1584692  T
Q  117 cttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaattctcaccaaaactctgtta 215  Q
       |||||||| |||||||| |||| |||| ||||||||| |||| || |||||| ||||| ||| ||| || | ||||||| |||||||||| ||||||    
T  1584693 accagaacctaattctaacatcaaaatcacccttacaactccaaaatcctcattttatcatgaaaccccaaaatccccaattttcaccaaaac-ctgtta 1584791  T
Q  216 aac 218  Q
    |||    
T  1584792 aac 1584794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 19127733 - 19127531
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||| | ||||||| ||||| |||||||||||   | ||||||| ||||||| ||| ||||    
T  19127733 acgggcagaaaacaggtttttccccaaaatcctatttttcttcaattcactccgcaaattagtttacagatgtgagttaacttactgtatgcactcagaa 19127634  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatca-taaaaaccc-aatttcccaattctcaccaaaactctgttaaacacc 221  Q
    ||||||||||||| || | ||||  |  ||||| |||| ||||||||||||||  |||||||| || | ||||||| |||||| ||||||||||||| ||    
T  19127633 cctatttctaacatcagaatcacaatctcaactccaaaatcatcatttcatcaccaaaaacccaaaatccccaattttcaccagaactctgttaaactcc 19127534  T
Q  222 aaa 224  Q
    |||    
T  19127533 aaa 19127531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 3266010 - 3265940
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  3266010 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 3265940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 42221148 - 42221235
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||  ||||||||| ||||||  ||| |||||||||||||||||    
T  42221148 aaaatcccatttttcttcaattcactctccaaatcagtttacagatatgaattaacttgctgtatacactcagaacctatttctaaca 42221235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 47871821 - 47871658
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||||||||| |||| | ||||| ||||||| |||||||||||   | ||||||| ||||||| ||| ||||    
T  47871821 acgggcagaaaacaggtttttccccaaaatcccattttccttcaattcacttcccaaattagtttacagatgtgagttaacttactgtatgcactcagaa 47871722  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaa 187  Q
    ||||||||||||| || | ||||  |  ||||  |||| |||||||||||||| ||||||||||    
T  47871721 cctatttctaacatcagaatcacaatctcaaccccaaaatcatcatttcatcacaaaaacccaa 47871658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 50082911 - 50082981
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  50082911 acgggcagaaaactggtttttcccaaaaatcccagtttccttccaatcactccccaaatcagtttacagat 50082981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 33097785 - 33097980
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||| |||||||||| | | |||||||||||||||||||||| |||  ||||||||| ||| ||  ||| ||||    
T  33097785 acgggcagaaaacaggtttttccccaaaattccatttttctccaattcactccccaaatcagtttacaaatatgaattaacttactgcatacactcagaa 33097884  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| || |  |||  |  | ||  | ||| |||||||||||||| |||| ||  | | ||||||||||||||||||||||||||||    
T  33097885 cctatttctaacatcagaaccacaatctctaccccaaaaatcatcatttcatcacaaaacccataatccccaattctcaccaaaactctgttaaac 33097980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 17177112 - 17177242
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||  | | |||| || ||||||  |||||| || | | ||||||||||||| ||||||||||||| || |||||| |||    
T  17177112 gatgaacatcagtacgggcagaatgcaggtttttcccaaaaatttcattttcctccaattcactccccaaattagtttacagatacgaaataacttgctg 17177211  T
Q  111 tatgtacttagaacctatttctaacaccaaa 141  Q
    |||| ||| |||||||||||| |||| ||||    
T  17177212 tatgcactcagaacctatttcaaacatcaaa 17177242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 21882284 - 21882355
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| ||||||||||||    
T  21882284 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagata 21882355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 54825564 - 54825449
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||| ||||  ||||| |||| ||||||  | | |||     
T  54825564 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttatagatgtaaattgacttactgtatacattcagag 54825465  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  54825464 actatttctaacacca 54825449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 900311 - 900398
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    ||||||| |||||||| | | ||||||||||||| |||||||||||   ||||||||| ||||||  ||| |||||||||| ||||||    
T  900311 aaaatcctatttttctccaattcactccccaaattagtttacagatgtgaattaacttgctgtatacactcagaacctattcctaaca 900398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 13480398 - 13480327
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||| |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||    
T  13480398 acgggcagaaaactggtttttcccaaaaatctcattttcctccaattcactccccaaattagtttacagata 13480327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 16445713 - 16445784
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||  | |||||| || |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  16445713 acgggcagaatgcagatttttcccaaaaatcccatttttcctcaattcactccccaaattagtttacagata 16445784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 23724190 - 23724119
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||  | |||||| || |||||||||||||| || | | ||||||||||||||||||||||||||    
T  23724190 acgggcagaatgcagatttttcccaaaaatcccattttcctccaattcactccccaaatcagtttacagata 23724119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40909221 - 40909268
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  40909221 aaaaatcccatttttcttccattcactccccaaattggtttacagata 40909268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 41799317 - 41799270
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  41799317 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 41799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 42702037 - 42702084
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  42702037 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 42702084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 51601438 - 51601391
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  51601438 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 51601391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 51607319 - 51607272
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  51607319 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 51607272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 49240235 - 49240165
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||    
T  49240235 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagat 49240165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 49748949 - 49748879
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||    
T  49748949 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagat 49748879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 635128 - 635081
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  635128 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 635081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 23122410 - 23122457
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  23122410 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 23122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 53748119 - 53748073
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  53748119 aaaaatcccatttttcctc-aatcactccccaaattagtttacagata 53748073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 21882418 - 21882477
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||| ||| |||| || |||||||||||||||| |||||| |||||||||    
T  21882418 caaaatcatcatttcctcacaaaacccaaatttcccaattctcaacaaaac-ctgttaaac 21882477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 30396980 - 30397035
Alignment:
Q  163 tcatcatttcatcataaaaacccaatttcccaattctcacc-aaaactctgttaaac 218  Q
    |||||||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  30396980 tcatcatttcatcacaaaa-cccaaaatcccaattctcaccaaaaactctgttaaac 30397035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 643292 - 643489
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  643292 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgcacttagaa 643391  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  643392 cctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaactcaatttccccaattctcaccaaaactctgttaaacac 643489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 12399267 - 12399072
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  12399267 acgggcagaaaactggttttttccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaattttctgtatgcacttagaa 12399168  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  12399167 cctatttctaacaccaaatacactcttactacttcaaattcatcatttcaccat-aaaacccaatttcccaattctcactaaaactctgttaaacac 12399072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 42059297 - 42059493
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  42059297 acgggcagaaaactggttttactcaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcactcagaa 42059396  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| ||||||||  ||||||||||||||   |  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  42059397 cctatttctaacatcaaattcatgcttacaacttcaaaactacaatttcatcat-aaaacccaatttcccaaattctcaccaaaactctgttaaacac 42059493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 1318510 - 1318647
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  1318510 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 1318609  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  ||||||||||||||    
T  1318610 cctatttctaacaacaaattcatgcttacaacttcaaa 1318647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 20019101 - 20018908
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||| ||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  20019101 acgggcaaaaacctggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 20019002  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| |||||| || || |||||| |||| ||| || |||| ||||||| |||||  ||||||||||||| | ||||||||||||    
T  20019001 cctatttctaacatcaaattgacactcacaactccaaaatcaacaattcaacataaaatcccaaaatcccaattctcactataactctgttaaa 20018908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 2025664 - 2025457
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| |||||||||| | || ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2025664 gatgaacatcagtacggccagaaaactggtctttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctg 2025565  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    |||||||||||||||||||||||||| |||||| || || |||||| | |||| ||  |||||| ||||||| || || | ||||||| ||||||||||     
T  2025564 tatgtacttagaacctatttctaacatcaaatttacactcacaactccaaaatccacaatttcaacataaaacccaaaatccccaattttcaccaaaac- 2025466  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  2025465 ctgttaaac 2025457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 21758037 - 21758159
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  21758037 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaa 21758136  T
Q  124 cctatttctaacaccaaattcac 146  Q
    |||||||| | || |||||||||    
T  21758137 cctatttcaagcatcaaattcac 21758159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 32628134 - 32628286
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttaca--gatacaaattaactttc 108  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||||||    
T  32628134 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaaacacttcccaaatcagtttacacagatacaaattaactttc 32628233  T
Q  109 tgtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||||| |||||||||||| ||||||||| || |||||| ||||    
T  32628234 tgtatgtacttagaatctatttctaacatcaaattcacactcacaactccaaa 32628286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 8196627 - 8196433
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||    
T  8196627 acgggcagaaatctggtttttccccaaaaccccatttttcttccaatcactccccaaatcagtttacagatgcaaattaattttctgtatacacttagaa 8196528  T
Q  124 cctatttctaacaccaaattcactcttacaacttc-aaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||| ||||  |||||||| || |||||||  |||||| ||||||| || || | ||||||| | |||||||| |||||||||    
T  8196527 cctatttctaacatcaacttcatgcttacaacatcaaaattcacaatttcaacataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 8196433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 49159507 - 49159700
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||| | || ||||||| ||||||  ||| ||||    
T  49159507 acgggcagaaaactggtttttcccaaaaatcccatttttcttccattcactccccaaatcagtttacagacataagttaacttgctgtatacactcagaa 49159606  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    || |||| ||||| |||| |||| || |||||| |||||||| || |||| ||||||| |||||  | ||||||||||| | | ||||||||||    
T  49159607 cccatttttaacatcaaaatcacactcacaactccaaattcaacaattcaacataaaaccccaaaattccaattctcactacagctctgttaaa 49159700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 2281830 - 2282028
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  2281830 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 2281928  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc--aattctcaccaaaactctgttaaacac 220  Q
    ||||| || |||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||  ||||||  |||||||||||| ||||||||||||||    
T  2281929 acctaattttaaccccaaagtcaagcttacaacttcaaaatcatcattttatcataaaaaccccttttccccaaattctcaccaacactctgttaaacac 2282028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 13453203 - 13453034
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | || ||||||||| |    
T  13453203 aaaatcccatttttcttcaaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttccagcatcaaattcacac 13453104  T
Q  149 ttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |  |||||  |||| |||||||| || ||||||| || || | |||||||  ||||||||| |||||||||    
T  13453103 tcccaactcccaaaatcatcattccaacataaaacccaaaatccccaatttccaccaaaac-ctgttaaac 13453034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 40922349 - 40922228
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||    
T  40922349 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatggaaattaactttctgtatacacttagaa 40922250  T
Q  124 cctatttctaacaccaaattca 145  Q
    |||||||||||||  |||||||    
T  40922249 cctatttctaacattaaattca 40922228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 13963431 - 13963237
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  13963431 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 13963333  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| |||||||| |||| |||  |||||||||||||| || |||||| ||||||||| |||||  | |||||| ||||||||||| |||||||||    
T  13963332 aactaattctaacatcaaaatcatgcttacaacttcaaaatcctcattttatcataaaaccccaaaattccaattcctcaccaaaac-ctgttaaac 13963237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 49151356 - 49151525
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |  | |||||||||||||||| ||||||||       
T  49151356 aaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatga 49151455  T
Q  149 ttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||||||  | |  |||||||||||||| || || | |||||||  ||||||||| |||||||||    
T  49151456 ttacaacttcaaaaactacaatttcatcataaaacccaaaatccccaatttccaccaaaac-ctgttaaac 49151525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 49158046 - 49158215
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |  | |||||||||||||||| ||||||||       
T  49158046 aaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatga 49158145  T
Q  149 ttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||||||  | |  |||||||||||||| || || | |||||||  ||||||||| |||||||||    
T  49158146 ttacaacttcaaaaactacaatttcatcataaaacccaaaatccccaatttccaccaaaac-ctgttaaac 49158215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 15632098 - 15632297
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtac 117  Q
    ||||| ||||||||||||| | |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | | || |  | |||| |     
T  15632098 atcagtacgggcagaaaacaggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattacgtgttctatgca- 15632196  T
Q  118 ttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaa 216  Q
      || ||||| |||||||| | || |||  ||||||||||||||||| |||||| ||||||||| |||||  |||||||| ||||||||||| |||||||    
T  15632197 acagtacctaattctaacatcgaaatcatgcttacaacttcaaattcctcattttatcataaaaccccaaaatcccaattcctcaccaaaac-ctgttaa 15632295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 2439627 - 2439820
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  2439627 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 2439725  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | | | |||||||| ||||  ||  |||||||| ||||| || |||||  ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  2439726 aaccaattctaacatcaaaaacagacttacaacatcaaaatcctcattctatcataaaatcccaaattcccaattcctcaccaaaac-ctgttaaa 2439820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 30602289 - 30602216
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30602289 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 30602216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 11879810 - 11879984
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  11879810 acgggcagaaaactggtttttcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 11879908  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||| | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  11879909 acccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 11879984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 11340471 - 11340678
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttct 109  Q
    |||| ||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| | | |    
T  11340471 gatgaacatcagtacgagcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaattagtttacagatatataattaagtgt-t 11340569  T
Q  110 gtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
     |||| |   |||| ||| |||||||| |||| ||   |||||||| ||||| |||||||||  |||||||| |||||  || ||||| |||||||||||    
T  11340570 ctatgcaaccagaaactaattctaacatcaaaatcctgcttacaacatcaaaatcatcattttgtcataaaaccccaaaatctcaattcctcaccaaaac 11340669  T
Q  209 tctgttaaac 218  Q
     |||||||||    
T  11340670 -ctgttaaac 11340678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 18436623 - 18436434
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgta 116  Q
    ||||| ||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||||||| | |||||| | | | |||| |    
T  18436623 atcagtacgggcagaaaactggtttttcccaaaaatcc-atttttcttccaatcactccccaaattagtttacagatatataattaagtgt-tctatgca 18436526  T
Q  117 cttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
       |||| ||| |||||||| |||| |||  |||||||||||||| ||||||||| ||||||||| |||||  |||||||| |||||||||||    
T  18436525 accagaaactaattctaacatcaaa-tcatgcttacaacttcaaaatcatcattttatcataaaaccccaaaatcccaattcctcaccaaaac 18436434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 33405396 - 33405466
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33405396 acgggcagaaaactggttttacccaaatatcccatttttcttccaatcactccccaaatcagtttacagat 33405466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 26089378 - 26089308
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  26089378 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 26089308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 40684189 - 40684119
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40684189 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 40684119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 48987348 - 48987278
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  48987348 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 48987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 13026657 - 13026769
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||   |||||||| ||||||  ||| ||||    
T  13026657 acgggcagaaaacaggtttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagatatggattaacttgctgtatacactcagaa 13026756  T
Q  124 cctatttctaaca 136  Q
    |||||||||||||    
T  13026757 cctatttctaaca 13026769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 750587 - 750657
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||| ||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  750587 acgggcaaaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 750657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 26119799 - 26119730
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  26119799 acgggcagaaaactggttttccc-aaaaatcccattttccttccaatcactccccaaatcagtttacagat 26119730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 13020450 - 13020562
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||   ||||||||  |||||  ||| ||||    
T  13020450 acgggcagaaaacaggtttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagatatggattaacttgatgtatacactcagaa 13020549  T
Q  124 cctatttctaaca 136  Q
    |||||||||||||    
T  13020550 cctatttctaaca 13020562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 16843299 - 16843187
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||| |||||||| | | ||||||||||||||||||||||||||  ||||||||| ||| ||  ||| ||||    
T  16843299 acgggcagaaaacaggtttttccccaaaatcctatttttctccaattcactccccaaatcagtttacagatatgaattaacttactgcatacactcagaa 16843200  T
Q  124 cctatttctaaca 136  Q
    |||||||||||||    
T  16843199 cctatttctaaca 16843187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 37288221 - 37288281
Alignment:
Q  34 aactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  37288221 aactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 37288281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 81447 - 81376
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    ||||||||||||||||||||||||||| || |||||| ||||||| ||| ||||||||||||||||| ||||    
T  81447 tcactccccaaatcagtttacagatacgaaataacttgctgtatgcactcagaacctatttctaacatcaaa 81376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 14168951 - 14168829
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    |||||||||||||||  | | |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||| || ||||||  |||||| |||    
T  14168951 tcagcacgggcagaatgcaggtttttcccaaaaatcgcattttcctccaattcactccccaaattagtttacagatacgaaataacttgttgtatgcact 14168852  T
Q  119 tagaacctatttctaacaccaaa 141  Q
     ||||||||||||||||| ||||    
T  14168851 cagaacctatttctaacatcaaa 14168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 14173198 - 14173076
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    |||||||||||||||  | | |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||| || ||||||  |||||| |||    
T  14173198 tcagcacgggcagaatgcaggtttttcccaaaaatcgcattttcctccaattcactccccaaattagtttacagatacgaaataacttgttgtatgcact 14173099  T
Q  119 tagaacctatttctaacaccaaa 141  Q
     ||||||||||||||||| ||||    
T  14173098 cagaacctatttctaacatcaaa 14173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 26113183 - 26113113
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||  |||| || |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  26113183 acgggcagaaaactagtttttcccaaaaatcccattttcctttcaatcactccccaaatcagtttacagat 26113113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 23521725 - 23521836
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  ||||| |||||||||| | | ||||||| |||||||||||||| ||   ||||||||| ||||||  ||| ||||    
T  23521725 acgggcagaaaactggtttttccccaaaataccatttttctccaattcactccacaaatcagtttacatatgtgaattaacttgctgtataaactcagaa 23521824  T
Q  124 cctatttctaac 135  Q
    ||||||||||||    
T  23521825 cctatttctaac 23521836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 14281049 - 14280978
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| || |||||||||||||| || | | ||||||||||||||||||||||||||    
T  14281049 acgggcagaaaacaggtttttcccaaaaatcccattttcctccaattcactccccaaatcagtttacagata 14280978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 2388007 - 2387937
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| |||| |||||||||| |||||||||||    
T  2388007 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatccctccccaaattagtttacagat 2387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 46175064 - 46175153
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtat 113  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| ||||||    
T  46175064 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtat 46175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 15085332 - 15085244
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||| |||| | |||||||||||||  ||||||||||   |||||||||  |||||| ||| |||||||||| ||||||    
T  15085332 aaaaatcccattttccttcaattcactccccaaattggtttacagatgtgaattaacttgttgtatgcactcagaacctattcctaaca 15085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 11898738 - 11898623
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| ||||||| |||  ||||| |||| ||||||  | | |||     
T  11898738 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttaccgatgtaaattgacttgctgtatacattcagag 11898639  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  11898638 actatttctaacacca 11898623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 14287515 - 14287444
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| || |||||||||| ||| || | | ||||||||||||||||||||||||||    
T  14287515 acgggcagaaaacaggtttttcccaaaaatcccagtttcctccaattcactccccaaatcagtttacagata 14287444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 15839348 - 15839419
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  ||||| |||||||||| | | ||||||||||||||||||||||||||    
T  15839348 acgggcagaaaacaggtttttccccaaaattccatttttctccaattcactccccaaatcagtttacagata 15839419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20579332 - 20579285
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  20579332 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 20579285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 26289140 - 26289052
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||| ||||||| |||| | |||||||||||||  ||||||||||   ||||||||| ||||||  ||| | |||||||||||||||    
T  26289140 aaaaattccattttccttcaattcactccccaaattggtttacagatttgaattaacttgctgtatacactcaaaacctatttctaaca 26289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 806365 - 806318
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  806365 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 806318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11631307 - 11631260
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  11631307 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 11631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 15722582 - 15722535
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  15722582 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 15722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18048597 - 18048550
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  18048597 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 18048550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18055076 - 18055029
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  18055076 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 18055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 23200864 - 23200817
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  23200864 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 23200817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 23506991 - 23506944
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  23506991 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 23506944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 23665190 - 23665143
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  23665190 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 23665143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 29796533 - 29796580
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  29796533 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 29796580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 29800352 - 29800399
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  29800352 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 29800399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 5186671 - 5186601
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||| | |||||||||||    
T  5186671 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaatttagtttacagat 5186601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 16184803 - 16184738
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaac 135  Q
    |||||||||||||  ||||||||||   || |||||| ||||||| ||| ||||||||||||||||    
T  16184803 tcactccccaaattggtttacagatgtgaaataacttgctgtatgcactcagaacctatttctaac 16184738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 11219476 - 11219448
Alignment:
Q  70 tcactccccaaatcagtttacagatacaa 98  Q
    |||||||||||||||||||||||||||||    
T  11219476 tcactccccaaatcagtttacagatacaa 11219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 15142968 - 15143048
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttaca 91  Q
    |||| ||||||| ||||||||||  | |||||| || |||||||||| ||||||     ||||||||||||||||||||||    
T  15142968 gatgaacatcagtacgggcagaatgcagatttttcccaaaaatcccaattttctcaatttcactccccaaatcagtttaca 15143048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 15839482 - 15839541
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| |||||||  | |||||||||||| |||||||| ||||||||    
T  15839482 caaaatcatcatttcatcacaaaaaccataattcccaattctctccaaaact-tgttaaac 15839541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 16413707 - 16413510
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  16413707 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaattagtttacagatacaaattaattttctgtatgcacttagaa 16413608  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  16413607 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaaattctcactaaaactctgttaaacac 16413510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 30099776 - 30099580
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  30099776 acgggcagaaaactggttttacccaaaaatcccatttctcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgcacttagga 30099677  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  30099676 cctatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaacccaatttccccaattctc-ccataactctgttaaacac 30099580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 50142193 - 50142000
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  50142193 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtgtgcacttagaa 50142094  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||||||||   | ||||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  50142093 cctatttctaacatcaaattcatgcttacaacttcaaaactaccatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 50142000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 47121872 - 47122056
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  47121872 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 47121971  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaac 208  Q
    ||||||||||||| ||||||||  |||||||| |||||   | ||||||||||||||| || || | ||||||| | ||||||||    
T  47121972 cctatttctaacatcaaattcatgcttacaacatcaaaactaccatttcatcataaaacccaaaatccccaatttttaccaaaac 47122056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 47129240 - 47129424
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  47129240 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 47129339  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaac 208  Q
    ||||||||||||| ||||||||  |||||||| |||||   | ||||||||||||||| || || | ||||||| | ||||||||    
T  47129340 cctatttctaacatcaaattcatgcttacaacatcaaaactaccatttcatcataaaacccaaaatccccaatttttaccaaaac 47129424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 48774042 - 48773849
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||||  ||||||||||  |||||| ||||||||||| ||||||||    
T  48774042 acgggcagaaaactggtttttcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtaaattagctttctgtatgcacttagaa 48773943  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| ||||||||| || |||||| |||| ||| ||||||||||||||| |||||  || |||||||||| ||||||||||||||    
T  48773942 cctatttctaacatcaaattcacactcacaactccaaaatcaacatttcatcataaaaccccaaaatctcaattctcactaaaactctgttaaa 48773849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 51477581 - 51477778
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || | |   |||    
T  51477581 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctacgcaaccaga 51477679  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  51477680 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaaccaaatttcccaaattctcaccaaaactctgttaaacac 51477778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 14844600 - 14844403
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| |||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  14844600 gatgaacatcagtacggacagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcgaattaactttctg 14844501  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaac 208  Q
    |||| | ||||||||||||||||||| ||||||||  | ||||||||||||  ||  |||||||||||||| || || | ||||||| | ||||||||    
T  14844500 tatgcaattagaacctatttctaacatcaaattcatgcctacaacttcaaaaccacaatttcatcataaaacccaaaatccccaatttttaccaaaac 14844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 28759594 - 28759788
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |  |||||    
T  28759594 acgggcacaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaa 28759693  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||||||||  | |  |||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  28759694 cctatttctaacatcaaattcatgcttacaacttcaaaaactacaatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 28759788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 38743639 - 38743833
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  38743639 acgggcagaaaactggtttttcccaaaaatcccatttttcgtccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaa 38743738  T
Q  124 cctatttctaacaccaaattcactcttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||| | || ||||||||| ||  |||||  |||| |||||||| || ||||||| || || | |||||||  ||||||||| |||||||||    
T  38743739 cctatttccagcatcaaattcacactcccaactcccaaaatcatcattccaacataaaacccaaaatccccaatttccaccaaaac-ctgttaaac 38743833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 50655432 - 50655295
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  50655432 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatacacttagaa 50655333  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  |||||||| |||||    
T  50655332 cctatttctaacatcaaattcatgcttacaacatcaaa 50655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 51246470 - 51246607
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| || |  |||||    
T  51246470 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcagattaactttctgtgtgcaactagaa 51246569  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||| ||||| ||||||||  ||||||||||||||    
T  51246570 cctatttttaacatcaaattcatgcttacaacttcaaa 51246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 29494281 - 29494416
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |  |||||    
T  29494281 acgggcagaaatctggttttttcccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaa 29494380  T
Q  124 cctatttctaacaccaaattcactcttacaacttca 159  Q
    ||||||||||||| ||||||||  ||||||||||||    
T  29494381 cctatttctaacatcaaattcatgcttacaacttca 29494416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 3782175 - 3781976
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  3782175 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 3782077  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt---cccaattctcaccaaaactctgttaaaca 219  Q
    ||||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||  |||   || |||||||||||| |||||||||||||    
T  3782076 acctaattctaaccccaaaatcaagcttacaacttcaaaatcatcattttatcataaaaacccctttttccccaaattctcaccaacactctgttaaaca 3781977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 16331040 - 16330843
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | |||||||||||||  ||||||||||   | ||||||| ||||||| ||| ||||    
T  16331040 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattggtttacagatgagagttaacttactgtatgcactcagaa 16330941  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| || | ||||  |  ||||  |||| ||||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  16330940 cctatttctaacatcagaatcacaatctcaaccccaaaatcatcatttaatcacaaaaacccaaattccccaattctcaccaaaactctgttaaacac 16330843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 9690906 - 9690699
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| ||||| || |||||| || |||||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||||| |||    
T  9690906 gatgaacatcagtacggccagaatacagatttttcccaaaaatccaattttccttccattcactccccaaatcagtttacagatatgaattaacttgctg 9690807  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||  ||  |||||||||| |||||| ||||   ||  || | ||| ||||||||||||||| ||| |||| || || | |||||||||||||| |||||    
T  9690806 tatacacccagaacctattcctaacatcaaaacaacaatttctactccaaattcatcatttcttcacaaaacccaaaatccccaattctcaccagaactc 9690707  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  9690706 tgttaaac 9690699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 6927034 - 6926847
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | | | |||| |   |||    
T  6927034 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca-atacataattaagtgt-tctatgcaaccaga 6926937  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    | ||| |||||||| |||| |||  |||||||||||||| || ||||||| |||||||||        ||||||||||||||||||||||||||||||    
T  6926936 aactaattctaacatcaaaatcatgcttacaacttcaaaatcctcatttcttcataaaaa--------cccaattctcaccaaaactctgttaaacac 6926847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 10768483 - 10768657
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  10768483 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 10768581  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||| | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  10768582 acccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 10768657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 45612381 - 45612555
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  45612381 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 45612479  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||| | |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  45612480 acccaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 45612555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 53872070 - 53871877
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| | | | |||| |   |||    
T  53872070 acgggcagaaaactggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagatacataattaagtgt-tttatgcaaccaga 53871972  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||| |||||||| ||||||||   || ||||| |||| ||| ||||| ||||||||| || ||  ||||||||||||| ||||||||||||||    
T  53871971 acctaattctaacatcaaattcatcattccaactccaaaatcaacattttatcataaaatcctaaaatcccaattctcactaaaactctgttaaa 53871877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 21352911 - 21352984
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21352911 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 21352984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 21150911 - 21150726
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  21150911 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 21150813  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
    | ||| || ||||| |||| |||   ||||||||||||| || |||||  ||||||||| |||||  |||||||| |||||||||||    
T  21150812 aactaattataacatcaaaatcatgtttacaacttcaaaatcctcattctatcataaaaccccaaaatcccaattcctcaccaaaac 21150726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 3552984 - 3552883
Alignment:
Q  120 agaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaac 218  Q
    |||| ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3552984 agaaactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaac 3552885  T
Q  219 ac 220  Q
    ||    
T  3552884 ac 3552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 9771344 - 9771149
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||| | | | |||| |   |||    
T  9771344 acgggcagaaaactggtttttcccaaaaatctcatttttcttccaatcactccccaaatcagtttacagatacatacttaagtgt-tctatgcaaccaga 9771246  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| |||||||| |||| |||  |||||||||||||| || |||||| ||||||||| ||| || | ||||||| ||||||||||| |||||||||    
T  9771245 aactaattctaacatcaaaatcatgcttacaacttcaaaatcctcattttatcataaaaccccaaaatccccaattcctcaccaaaac-ctgttaaac 9771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 10382666 - 10382741
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10382666 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 10382741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 10411319 - 10411394
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411319 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 10411394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 891930 - 891757
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacctatttctaacaccaaattcac 146  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| | | | |||| | | |||| | | |||||||| ||||  ||     
T  891930 aaaaatcccattttccttccaatcactccccaaatcagtttatagatacataattaagtgt-tctatgcaatcagaaaccaattctaacatcaaaaacat 891832  T
Q  147 tcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaacac 220  Q
     |||||||||||||| || |||||  ||||||||| ||||| ||| ||||| |||||||||||||||||||||||    
T  891831 gcttacaacttcaaaatcctcattctatcataaaaccccaaattctcaattcctcaccaaaactctgttaaacac 891757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 15375357 - 15375565
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||||| |||    
T  15375357 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagatatgaattaacttgctg 15375456  T
Q  111 tatgtacttagaaccta-tttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    |||  ||| |||||||| |||||||||  |||   ||  || | ||| ||| ||||||||||| ||| |||| ||    ||||||||| |||||||||||    
T  15375457 tatacactcagaacctattttctaacatgaaaacaacaattcctactccaatttcatcatttcttcacaaaacccttgattcccaattttcaccaaaact 15375556  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  15375557 ctgttaaac 15375565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 49163892 - 49164004
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||   ||||||||| ||||||| ||| | ||    
T  49163892 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtgaattaacttgctgtatgcactcataa 49163991  T
Q  124 cctatttctaaca 136  Q
    |||||||||||||    
T  49163992 cctatttctaaca 49164004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 2498467 - 2498397
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||| |||||||||||    
T  2498467 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaattagtttacagat 2498397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 12724531 - 12724444
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||||||| | ||||||||||||| |||||| |||||  | ||||||| ||||||  ||| |||||||||||||||||    
T  12724531 aaaatcccatttttcttcaattcactccccaaattagtttaaagatatgagttaacttgctgtatacactcagaacctatttctaaca 12724444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 20376666 - 20376595
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  20376666 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagata 20376595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 30596283 - 30596212
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  30596283 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagata 30596212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 54091159 - 54091086
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||| | |||| ||  ||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  54091159 acgggcagaaaacaggtttttccccaaaatcccaattttcttcaaatcactccccaaattagtttacagataca 54091086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 19343557 - 19343497
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| ||||||||| |||| |||| || |||||||||||||||||||||||||||||||||    
T  19343557 caaaatcatcattttatcacaaaacccaaatttcccaattctcaccaaaactctgttaaac 19343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 54832609 - 54832519
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacacca 139  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| ||||||  | | |||  |||||||||||||||    
T  54832609 aaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtatacattcagagactatttctaacacca 54832519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 43723487 - 43723398
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtat 113  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| ||||||    
T  43723487 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtat 43723398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 53570656 - 53570567
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtat 113  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| ||||||    
T  53570656 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtat 53570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 4677972 - 4678019
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  4677972 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 4678019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 12201011 - 12201054
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttaca 91  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  12201011 aaaaatcccattttccttcaaatcactccccaaatcagtttaca 12201054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 13910316 - 13910387
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||  | |||||| || |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  13910316 acgggcagaatgcagatttttcccaaaaatcccatttttcctcaattcactccccaaattagtttacagata 13910387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 13940772 - 13940843
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||  | |||||| || |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  13940772 acgggcagaatgcagatttttcccaaaaatcccatttttcctcaattcactccccaaattagtttacagata 13940843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 14652114 - 14652067
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  14652114 aaaaatcccatttttctccaattcactccccaaatcagtttacagata 14652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 41176285 - 41176332
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  41176285 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 41176332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 41181423 - 41181470
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  41181423 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 41181470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 46070534 - 46070463
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||| ||||||| ||||||||||||    
T  46070534 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcacttcccaaattagtttacagata 46070463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 11956020 - 11955950
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  11956020 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagttaacagat 11955950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 16833961 - 16834027
Alignment:
Q  28 gcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||| |||| ||  |||||||||||||| ||| | |||||||| ||||||||||||||||    
T  16833961 gcagaaaactggtttttccccaaaatcccattttttttcaattcactcccgaaatcagtttacagat 16834027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 18961686 - 18961880
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| | | |||| ||  ||||||||||||| || | | ||||||||||||| |||||||| ||   ||||||||| || |||  ||| ||||    
T  18961686 acgggcagaaagcaggtttttccccaaaatcccattttcctccaattcactccccaaattagtttacaaatgtgaattaacttgctctatacactcagaa 18961785  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| || |   ||  |  | ||  |||| |||||||||||||| |||| ||  | |||||||||||||||||||  |||||||||    
T  18961786 cctatttctaacatcagaacaacaatctctaccccaaaatcatcatttcatcacaaaacccataattcccaattctcaccaaaaacctgttaaac 18961880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 13947275 - 13947332
Alignment:
Q  38 gattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||| || |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  13947275 gatttttcccaaaaatcccatttttcctcaattcactccccaaattagtttacagata 13947332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 16829342 - 16829295
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| |||| | ||||||||||||| ||||||||||||    
T  16829342 aaaaatcccattttccttcaattcactccccaaattagtttacagata 16829295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 16834122 - 16834153
Alignment:
Q  189 ttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||||||||||||||||||||||    
T  16834122 ttcccaattctcaccaaaactctgttaaacac 16834153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 16837864 - 16837817
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| |||| | ||||||||||||| ||||||||||||    
T  16837864 aaaaatcccattttccttcaattcactccccaaattagtttacagata 16837817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 29551662 - 29551732
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||  | |||| ||  |||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  29551662 acgggcagaaaataggtttttccccaaaatcccatttttcttcaaatcact-cccaaattagtttacagata 29551732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 32387441 - 32387371
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||| |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||    
T  32387441 acgggcagaaaactggtttttcc-aaaaatctcattttcctccaattcactccccaaattagtttacagata 32387371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 44776011 - 44776058
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  44776011 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 44776058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 44781195 - 44781242
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  44781195 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 44781242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 11939263 - 11939197
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    ||||||||||| |  ||||||||||    ||||| || |||||||||||||||||||||||||||||    
T  11939263 tcactccccaatttggtttacagatgtgtattaatttgctgtatgtacttagaacctatttctaaca 11939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 11963574 - 11963504
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  11963574 acgggcagaaaacaagtttttccccaaaatcccatttttcttcaattcactccccaaattagttaacagat 11963504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 12153666 - 12153716
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||| || | | ||||||||||||| ||||||||||||||||    
T  12153666 aaaatcccattttcctccaattcactccccaaattagtttacagatacaaa 12153716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 12256365 - 12256419
Alignment:
Q  41 tttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||| |||||||||||||| || | | ||||||||||||| ||||||||||||    
T  12256365 tttacccaaaaatcccattttcctccaattcactccccaaattagtttacagata 12256419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 27028986 - 27028956
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27028986 tcccaattctcaccaaaactctgttaaacac 27028956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 27034107 - 27034077
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27034107 tcccaattctcaccaaaactctgttaaacac 27034077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 11644219 - 11644102
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    ||||||||  ||||| || | |||| || ||||| |||||||| || | | |||||||| |||| |||||||||||   || ||||||  |||||| |||    
T  11644219 tcagcacgaccagaacacaggtttttcccaaaaagcccattttcctccaattcactccctaaattagtttacagatgtgaaataacttgttgtatgcact 11644120  T
Q  119 tagaacctatttctaaca 136  Q
     |||||||||||||||||    
T  11644119 cagaacctatttctaaca 11644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8742308 - 8742232
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||  | | |||| || |||||||||||||||| || | ||||||||||||| | ||||||||||    
T  8742308 tcagtacgggcagaatgcaggttttccccaaaaatcccatttttcctcaattcactccccaaattactttacagata 8742232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8760478 - 8760402
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||  | | |||| || |||||||||||||||| || | ||||||||||||| | ||||||||||    
T  8760478 tcagtacgggcagaatgcaggttttccccaaaaatcccatttttcctcaattcactccccaaattactttacagata 8760402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 11955881 - 11955826
Alignment:
Q  163 tcatcatttcatcataaaaacccaatttcccaattctcacc-aaaactctgttaaac 218  Q
    |||||||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  11955881 tcatcatttcatcacaaaa-cccaaaatcccaattctcaccaaaaactctgttaaac 11955826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 12537141 - 12537053
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    |||| ||||||| ||||||||||  | | |||| || |||||||||||||| ||   | ||||||||||||| ||||||||||| ||||    
T  12537141 gatgaacatcagtacgggcagaatgcaggtttttcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgcaaa 12537053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 18756333 - 18756285
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||    
T  18756333 aaaatcccatttttctccaattcactccccaaattggtttacagataca 18756285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 8e-85; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 20276638 - 20276428
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20276638 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 20276539  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaact 209  Q
    |||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  20276538 tatgcacttggaacctaattctaacaccaaattcacacttacaacttcaaattcatcatctcatcataaaaacccaatttccccaattctcaccaaaact 20276439  T
Q  210 ctgttaaacac 220  Q
    |||||||||||    
T  20276438 ctgttaaacac 20276428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 20076317 - 20076124
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  20076317 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaattaacttcgtgtatgtacttagaa 20076218  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| || || | ||||||| |||||||||| |||||||||    
T  20076217 cctatttctaacatcaaattcacacttacaacttcaaattcatcattccatcataaaacccaaaatccccaattttcaccaaaac-ctgttaaac 20076124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 37676149 - 37676286
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37676149 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaa 37676248  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  37676249 cctatttctaacaccaaattcatgcttacaacttcaaa 37676286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 37682820 - 37682957
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37682820 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaa 37682919  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  37682920 cctatttctaacaccaaattcatgcttacaacttcaaa 37682957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 39189050 - 39188913
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39189050 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 39188951  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  ||||||||| ||||    
T  39188950 cctatttctaacatcaaattcatgcttacaactccaaa 39188913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 38907431 - 38907307
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtact 118  Q
    |||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38907431 tcagtacgggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgtact 38907332  T
Q  119 tagaacctatttctaacaccaaatt 143  Q
    |||||||||||||||||| ||||||    
T  38907331 tagaacctatttctaacatcaaatt 38907307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 48428595 - 48428789
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |  |||||    
T  48428595 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaa 48428694  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||||||||  | |  |||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  48428695 cctatttctaacatcaaattcatgcttacaacttcaaaaactacaatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 48428789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 19045687 - 19045481
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||| ||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  19045687 gatgaacatcagtacgggtagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagacataaattcactttctg 19045588  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||||||||||||||||||||||||| ||||||||| || |||||| |||| ||   | |||| ||||||| || || | | ||||| |||||||||| |    
T  19045587 tatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccataattcaacataaaatccaaaatcctcaattttcaccaaaac-c 19045489  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  19045488 tgttaaac 19045481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 42626941 - 42627135
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  42626941 acgggcagaaaactggttttttccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaa 42627040  T
Q  124 cctatttctaacaccaaattcactcttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||| || ||||||||| ||  |||||  |||| |||||||| || |||| || || || | ||||||| |||||||||| |||||||||    
T  42627041 cctatttctagcatcaaattcacactcccaactcccaaaatcatcattccaacatagaacccaaaatccccaattttcaccaaaac-ctgttaaac 42627135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 9292444 - 9292621
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| |   |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||   || ||||    
T  9292444 acgggcagaaaactggtttttctccaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaattaacttactgtatacgctcagaa 9292543  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctca 201  Q
    ||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| |||||  ||||||||||||    
T  9292544 cctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaaccccaaaatcccaattctca 9292621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 18026125 - 18025940
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  18026125 acgggcagaaaactggttttacccaaaaatctcatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 18026027  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
    | ||| |||||||| |||| |||  |||||||||||||| ||||||||| ||||||||| |||||  |||||||| |||||||||||    
T  18026026 aactaattctaacatcaaaatcatgcttacaacttcaaaatcatcattttatcataaaaccccaaaatcccaattcctcaccaaaac 18025940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 17150047 - 17150254
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttct 109  Q
    |||| ||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | | |    
T  17150047 gatgaacatcagtacgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacatatacataattaagtgt-t 17150145  T
Q  110 gtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
     |||| |   |||| ||| |||||||| |||| |||  |||| ||||||||| || |||||| ||||||||| |||||  || ||||| |||||||||||    
T  17150146 ctatgcaaccagaaactaattctaacatcaaaatcatgcttataacttcaaaatcctcattttatcataaaaccccaaaatctcaattcctcaccaaaac 17150245  T
Q  209 tctgttaaac 218  Q
     |||||||||    
T  17150246 -ctgttaaac 17150254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 18418869 - 18419062
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | | | |||| | | |||    
T  18418869 acgggcagaaaactggttttacccaaaaatcccatttttcttccattcactccccaaatcagtttacagatacataattaagtgt-tctatgcaatcaga 18418967  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | | | ||||||||  |||  ||  |||||||||||||| || |||||  ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  18418968 aaccaattctaacattaaaaacatgcttacaacttcaaaatcctcattctatcataaaaccccaaattcccaattcctcaccaaaac-ctgttaaa 18419062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 28555875 - 28555681
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatac-aaattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | | | |||| |   |||    
T  28555875 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcaatttacagatacaaaattaagtgt-tctatgcaaccaga 28555777  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | | | |||||||| ||||  ||  |||||||||||||| || |||||  || |||||| ||||| ||||||||| ||||||||||| |||||||||    
T  28555776 aaccaattctaacatcaaaaacatgcttacaacttcaaaatcctcattctattataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 28555681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 4231935 - 4232125
Alignment:
Q  27 ggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacc 125  Q
    |||||||||||| |||| ||  |||||||||||||||||  ||||||||||||||| |||||||||||||| |||||| | | | |||| |   ||||||    
T  4231935 ggcagaaaactggtttttccccaaaatcccatttttctttaaatcactccccaaattagtttacagatacataattaagtgt-tttatgcaaccagaacc 4232033  T
Q  126 tatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    || |||||||| ||||||||   |||||||| |||| ||| ||||| |||||||||  ||||  ||||||||||||| ||||||||||||||    
T  4232034 taattctaacatcaaattcatcattacaactccaaaatcaacattttatcataaaattccaaaatcccaattctcactaaaactctgttaaa 4232125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 39095066 - 39095259
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| | | | |||| |   |||    
T  39095066 acgggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacatacttaagtgt-tctatgcaaccaga 39095164  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | | | |||||||| ||||  ||  |||||||||||||| || |||||  ||||||||| ||||||||| ||||| |||||||||| |||||||||    
T  39095165 aaccaattctaacatcaaaaacatgcttacaacttcaaaatcctcattctatcataaaaccccaatttctcaattcctcaccaaaa-tctgttaaa 39095259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 20571486 - 20571556
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  20571486 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 20571556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 29150609 - 29150542
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttaca 91  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  29150609 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 29150542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 6741261 - 6741331
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  6741261 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 6741331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 31534673 - 31534603
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  31534673 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 31534603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 31563390 - 31563320
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  31563390 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 31563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 36211423 - 36211353
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  36211423 acgggcagaaaactggtttttcctaaaaatcccattttcctcccaatcactccccaaatcagtttacagat 36211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 20396246 - 20396173
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| |||| || |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  20396246 acgggcagaaaactggtttttcccaaaaattccatttttcttccaatcactccccaaattagtttacagataca 20396173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 36917859 - 36918055
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||||| |||||||  | ||||||||||||| |||||||||||   | ||||||| ||||||| ||| ||||    
T  36917859 acgggcagaaaacaggtttttccccaaaatcccacttttcttaaattcactccccaaattagtttacagatgtgagttaacttactgtatgcactcagaa 36917958  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatca-taaaaaccc-aatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| || | ||||  |  ||||| |||  ||||||||||||||  |||||||| || | ||||||| ||||||| ||||||||||||    
T  36917959 cctatttctaacatcagaatcacaatctcaactccaatatcatcatttcatcaccaaaaacccaaaatccccaattttcaccaacactctgttaaac 36918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 20300052 - 20300122
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20300052 acgggcagaaaacaggtttttcccaaaaatcccatttttcttccaatcactccccaaattagtttacagat 20300122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 29601663 - 29601592
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| || ||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  29601663 acgggcagaaaacaggtttttcccaaaaatcccatttttcttcaattcactccccaaattagtttacagata 29601592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 47484849 - 47484962
Alignment:
Q  24 acgggcagaaaactgattttaccta-aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttaga 122  Q
    ||||||||||||| | |||| |||  |||||||||||||||||| | ||||||||||||| |||||||||||    || |||||  |||||| ||| |||    
T  47484849 acgggcagaaaacaggtttttcctccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtgcatgaacttgttgtatgcactcaga 47484948  T
Q  123 acctatttctaaca 136  Q
    ||||||||||||||    
T  47484949 acctatttctaaca 47484962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 21963736 - 21963864
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||| | | |||| || ||||||||||||||||||| | ||||||||||||   ||||||||||  ||||| |||| |||    
T  21963736 gatgaacatcagtacgggcagaaaccaggtttttcccaaaaatcccatttttcttcaattcactccccaaactggtttacagatgtaaattgacttgctg 21963835  T
Q  111 tatgtacttagaacctatttctaacacca 139  Q
    |||  | | |||  |||||||||||||||    
T  21963836 tatacattcagagactatttctaacacca 21963864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 21921538 - 21921609
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| || |||||||||||||||||||   ||||||||||||| ||||||||||||    
T  21921538 acgggcagaaaacaggtttttcccaaaaatcccatttttcttcatttcactccccaaattagtttacagata 21921609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 24237779 - 24237733
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  24237779 aaaatcccatttttcttcaattcactccccaaatcagtttacagata 24237733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 20837626 - 20837550
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaat-cactccccaaatcagtttacagata 95  Q
    ||||||||||||||| || | |||| || |||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  20837626 tcagcacgggcagaatacaggtttttcccaaaaattccatttt-cttccaattcactccccaaatcagtttacagata 20837550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 24108384 - 24108291
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    |||||||||||||| || | |||||||||||||||  ||||||||||   |||||||||  |||||  ||| ||||||||||||||||| ||||    
T  24108384 aaaaatcccattttcctccaaatcactccccaaattggtttacagatgtgaattaacttgatgtatacactcagaacctatttctaacatcaaa 24108291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 24080357 - 24080445
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||| ||||||| |||| | |||||||||||||  ||||||||||   ||||||||| ||||||| ||| ||||| |||||||||||    
T  24080357 aaaaattccattttccttcaattcactccccaaattggtttacagatgtgaattaacttgctgtatgcactcagaacttatttctaaca 24080445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 22434328 - 22434281
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||    
T  22434328 aaaaatcctatttttcttcaattcactccccaaatcagtttacagata 22434281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 41052524 - 41052670
Alignment:
Q  63 cttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||| ||| || ||||| |||| |||   |||||||||||||    
T  41052524 cttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattttaacatcaaaatcatgtttacaacttcaaa 41052622  T
Q  162 ttcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
     || |||||  ||||||||| |||||  |||||||| |||||||||||    
T  41052623 atcctcattctatcataaaaccccaaaatcccaattcctcaccaaaac 41052670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 20293446 - 20293491
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  20293446 aaaaatcccatttt-cttccaatcactccccaaattagtttacagat 20293491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 20823815 - 20823739
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||| ||||  | | |||| || |||||||||||||| || | | ||||||||||||||||||||||||||    
T  20823815 tcagcacgggtagaatgcaggtttttcccaaaaatcccattttcctccaattcactccccaaatcagtttacagata 20823739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20595485 - 20595438
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  20595485 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 20595438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 24237666 - 24237611
Alignment:
Q  163 tcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||||||| |||| || || | ||||| ||||||||||||||||||||||    
T  24237666 tcatcatttcatcacaaaacccaaaatccccaactctcaccaaaactctgttaaac 24237611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27281003 - 27281050
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  27281003 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 27281050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 36615695 - 36615746
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||||||| | ||||||||||||| | ||||||||| ||||    
T  36615695 aaaaatcccatttttcttcaattcactccccaaattaatttacagatgcaaa 36615746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 49328775 - 49328846
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||   |||| ||  |||||||||||||||| | | ||||||||||||||||| ||||||||    
T  49328775 acgggcagaaaacatgtttttccccaaaatcccatttttctccaattcactccccaaatcagtgtacagata 49328846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 20396124 - 20396094
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  20396124 tcccaattctcaccaaaactctgttaaacac 20396094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 21735951 - 21736017
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||  |||||||||||   | |||||| ||||||| ||| |||||||||||||||||    
T  21735951 tcactccccaaattggtttacagatatgtaataacttgctgtatgcactcagaacctatttctaaca 21736017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 4520116 - 4519920
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4520116 acgggcagaaacctggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 4520017  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||| ||||||||  ||||||||||||||   |  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  4520016 cctatttctaacatcaaattcatgcttacaacttcaaaactacaatttcatcat-aaaacccaatttcccaaattctcaccaaaactctgttaaacac 4519920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 23117915 - 23118115
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtac 117  Q
    ||||| ||||||||||||| | |||| || | ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||    
T  23117915 atcagtacgggcagaaaacaggtttttcccagaaatcccatttttcttccattcactccccaaatcagtttacagatgcaaaataactttctgtatgcac 23118014  T
Q  118 ttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcac-caaaactctgttaa 216  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| ||| ||||||||||||||| |||||  |||||||||||||  |||||||||||||    
T  23118015 ttagaacctatttctaacatcaaattcactctcacaactccaaaatcaacatttcatcataaaaccccaaaatcccaattctcactaaaaactctgttaa 23118114  T
Q  217 a 217  Q
    |    
T  23118115 a 23118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 9204737 - 9204544
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  9204737 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 9204638  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  |||||||| |||||   | ||||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  9204637 cctatttctaacatcaaattcatgcttacaacatcaaaactaccatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 9204544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 220
Target Start/End: Original strand, 22458865 - 22459037
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcact 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||      
T  22458865 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacccatttctaacatcaaattcatg 22458964  T
Q  148 cttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
     |||||||||||||   |  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  22458965 attacaacttcaaaactacaatttcatcat-aaaacccaatttcccaaattctcaccaaaactctgttaaacac 22459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 6588812 - 6589006
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6588812 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaa 6588911  T
Q  124 cctatttctaacaccaaattcactcttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||  | ||||||||| ||| |||||  |||| |||||||| || ||||||| || || | ||||||| |||||||||| |||||||||    
T  6588912 cctatttctagtatcaaattcacacttccaactcccaaaatcatcattccaacataaaatccaaaatccccaattttcaccaaaac-ctgttaaac 6589006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 7003457 - 7003263
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  7003457 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaaacaactttctgtatgtacttagaa 7003358  T
Q  124 cctatttctaacaccaaattcactcttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||| || ||||||||| ||| |||||  |||| ||| || |||| ||||||| || || | ||||||| |||||||||| |||||||||    
T  7003357 cctatttctagcatcaaattcacacttccaactcccaaaatcaacaattcaacataaaatccaaaatccccaattttcaccaaaac-ctgttaaac 7003263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 27908979 - 27908781
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | | | |||| |   |||    
T  27908979 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagcttacagatacataattaagtgt-tctatgcaaccaga 27908881  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt--cccaattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  27908880 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacac 27908781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 27955398 - 27955200
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | | | |||| |   |||    
T  27955398 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagcttacagatacataattaagtgt-tctatgcaaccaga 27955300  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt--cccaattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  27955299 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacac 27955200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 28981458 - 28981665
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28981458 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctg 28981557  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    | || |  |||||||||||||||||| ||||||||  ||||||||||||||  | || |||||||||||||| || || | |||||||   ||||||||     
T  28981558 tgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactataatttcatcataaaacccaaaatccccaatttctaccaaaac- 28981656  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  28981657 ctgttaaac 28981665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 28986678 - 28986885
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28986678 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctg 28986777  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaact 209  Q
    | || |  |||||||||||||||||| ||||||||  ||||||||||||||  | || |||||||||||||| || || | |||||||   ||||||||     
T  28986778 tgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactataatttcatcataaaacccaaaatccccaatttctaccaaaac- 28986876  T
Q  210 ctgttaaac 218  Q
    |||||||||    
T  28986877 ctgttaaac 28986885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 3224083 - 3223948
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  3224083 gatgaacatcagtacgggcagaaaactggtttttccccaaaatctcatttttcttccaatcactccccaaatcagtttacagacataaattaactttctg 3223984  T
Q  111 tatgtacttagaacctatttctaacaccaaattcac 146  Q
    |||||||||||||||||||||||||| |||||||||    
T  3223983 tatgtacttagaacctatttctaacatcaaattcac 3223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 12913640 - 12913442
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| | | | |||| |   |||    
T  12913640 acgggcagaaaactggttttacccaaaaatctcatttttcttccaatcactccccaaatcagtttacaaatacataattaagtgt-tctatgcaaccaga 12913542  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt--cccaattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||    
T  12913541 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacac 12913442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 1051384 - 1051521
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  1051384 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatacacttagaa 1051483  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  |||||||| |||||    
T  1051484 cctatttctaacatcaaattcatgcttacaacatcaaa 1051521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 14766332 - 14766526
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||    
T  14766332 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatacacttaaaa 14766431  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||   |||||||| ||||  | |  |||||| |||||||||| || ||||||||| | |||||||| |||||||||    
T  14766432 cctatttctaacatcaaattcatgtttacaactccaaaaactacaatttcaacataaaaaccaaaattcccaatttttaccaaaac-ctgttaaac 14766526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 27346406 - 27346600
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  27346406 acgggcagaaaactggtttttctcaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaattaactttctggatgcacttagaa 27346505  T
Q  124 cctatttctaacaccaaattcactcttacaact-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||||| || | ||||||| ||  |||||  |||| |||||||| || ||||||| || || | ||||||| ||| ||||| ||||||||||    
T  27346506 cctatttctagcatccaattcacactcccaactcccaaaatcatcattccaacataaaacccaaaatccccaattttcatcaaaa-tctgttaaac 27346600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 27364074 - 27364236
Alignment:
Q  56 catttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaac 155  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | || ||||||||| ||  ||||    
T  27364074 catttttcttccaatcactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttcaagcatcaaattcacactcccaac 27364173  T
Q  156 t-tcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |  |||| |||||||| || |||||||  | || | ||||||| |||||||||| |||||||||    
T  27364174 tcccaaaatcatcattccaacataaaacacaaaatccccaattttcaccaaaac-ctgttaaac 27364236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 852207 - 852401
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  852207 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 852305  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  852306 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 852401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 25701014 - 25700807
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||| ||| ||||||||||||| | |||| || |||||||||||| |||||||| |||||||||||||   |||||||||   | ||||||| |||    
T  25701014 gatgaacaccagtacgggcagaaaacaggtttttcccaaaaatcccattgttcttccattcactccccaaattgatttacagatgtgagttaacttactg 25700915  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| | ||||||||||||||| || | ||||  |  ||||  |||| |||||||||||||||||||||||||  ||||||||| | |||||||||    
T  25700914 tatgcactcataacctatttctaacatcagaatcacaatctcaaccccaaaatcatcatttcatcataaaaacccaaaatcccaattcactccaaaactc 25700815  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  25700814 tgttaaac 25700807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 214689 - 214883
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  214689 acgggcagaaaactggttttacccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 214787  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  214788 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 214883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 237565 - 237371
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  237565 acgggcagaaaactggttttacccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 237467  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  237466 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 237371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 728312 - 728506
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  728312 acgggcagaaaactggttttacccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 728410  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  728411 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 728506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 800813 - 801007
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  800813 acgggcagaaaactggttttacccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 800911  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  800912 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 801007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 807423 - 807229
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| | | | ||||     |||    
T  807423 acgggcagaaaactggttttacccaaaaatcctatttttcttccaatcactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccaga 807325  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  807324 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattctaacataaaaccccaaattcccaattcctcaccaaaac-ctgttaaac 807229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 14736207 - 14736134
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14736207 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 14736134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 29328925 - 29329132
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| ||||||||||||| ||||||||||||  |||||| || |||    
T  29328925 gatgaacatcagtacggccagaagtcaggtttttcccaaaaatcccattttccttccattcactccccaaattagtttacagatatgaattaatttgctg 29329024  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||  ||| ||||||||||||||||| ||||   ||  || | ||| ||||||||||||||| ||  |||| ||  | | ||||||| ||||||||||||    
T  29329025 tatacactcagaacctatttctaacatcaaaacaacaatttctactccaaattcatcatttcttcccaaaacccttaatccccaattttcaccaaaactc 29329124  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  29329125 tgttaaac 29329132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 10947990 - 10947920
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10947990 acgggcagaaaactggtttttcccaaaaatctcatttttcttccaatcactccccaaatcagtttacagat 10947920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16886684 - 16886614
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  16886684 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 16886614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 14415960 - 14415849
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||   ||||||||| || |||| | | ||||    
T  14415960 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagatgtgaattaacttgctatatgcattcagaa 14415861  T
Q  124 cctatttctaac 135  Q
    ||||||||||||    
T  14415860 cctatttctaac 14415849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 26485407 - 26485340
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttaca 91  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  26485407 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcaatttaca 26485340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 35541745 - 35541934
Alignment:
Q  28 gcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacct 126  Q
    ||||||||||| |||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||  |   |||| |     
T  35541745 gcagaaaactggtttttcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatacaaccagaaacc 35541843  T
Q  127 atttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | |||||||| ||||  ||  |||||||||||||| || |||||  ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  35541844 aattctaacatcaaaaacaggcttacaacttcaaaatcctcattctatcataaaaccccaaattcccaattcctcaccaaaac-ctgttaaa 35541934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 10956072 - 10956002
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  10956072 acgggcagaaaactggtttttcccaaaaatctcattttccttccaatcactccccaaatcagtttacagat 10956002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 14745905 - 14745835
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||| |||||||||||||||||||||||||||| |||||||||||    
T  14745905 acgggcagaaaactggtttttcccaaaaattccatttttcttccaatcactccccaaattagtttacagat 14745835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 23224084 - 23224014
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  23224084 acgggcagaaaactggtttttcccaaagatcccattttccttccaatcactccccaaatcagtttacagat 23224014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 12303936 - 12304128
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||| | ||||| ||||||| |||||||||||||| |||||| | | | |||| |   |||    
T  12303936 acgggcagaaaacaggtttttccccaaaatccaatttttcttcaattcactacccaaattagtttacagatacataattaagtgt-tttatgcaaccaga 12304034  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaa 216  Q
    ||||| |||||||| ||||||||   |||||||| |||| ||| ||||| ||||||||| |||||  || |||||||||| |||||||| ||||    
T  12304035 acctaattctaacatcaaattcatcattacaactccaaaatcaacattttatcataaaatcccaaaatctcaattctcactaaaactctattaa 12304128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 11391992 - 11391920
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatac 96  Q
    ||||||||||||| | |||| || ||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11391992 acgggcagaaaacaggttttccccaaaaatcccatttttcttcaaatcactccccaaattagtttacagatac 11391920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 14594101 - 14594030
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    ||||||||||||||||||||||||||| || |||||| ||||||| ||| ||||||||||||||||| ||||    
T  14594101 tcactccccaaatcagtttacagatacgaaataacttgctgtatgcactcagaacctatttctaacatcaaa 14594030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 43688131 - 43688246
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||  | | |||||||||||||||||||||||||  |||||||||| ||||||  | | ||||    
T  43688131 acgggcagaaagctggtttttccccaaaatcccatttttccccaattcactccccaaatcagtttacagatgtaaattaacttgctgtatacattcagaa 43688230  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  43688231 actatttctaacacca 43688246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 40143727 - 40143657
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| || ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  40143727 acgggcagaaaacaggtttttcccaaaaatcccatttttcttcaaatcactccccaaattagtttacagat 40143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 198
Target Start/End: Original strand, 37240354 - 37240496
Alignment:
Q  56 catttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaa 154  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||||| | |||||||| ||||  ||  |||||||    
T  37240354 cattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaa 37240452  T
Q  155 cttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||||||| ||||||||  ||||||||| | ||| ||||||||||    
T  37240453 cttcaaaatcatcattctatcataaaaccgcaaattcccaattc 37240496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16266255 - 16266185
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| || |||||||||||||||| || ||||||||||||||| |||||||||||    
T  16266255 acgggcagaaaacaggtttttcccaaaaatcccatttttcctcaaatcactccccaaattagtttacagat 16266185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 29298327 - 29298267
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| |||| || || ||||||||||||||||||||||||||||||    
T  29298327 caaaatcatcatttcatcacaaaacccaaaattcccaattctcaccaaaactctgttaaac 29298267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 29304882 - 29304822
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| |||| || || ||||||||||||||||||||||||||||||    
T  29304882 caaaatcatcatttcatcacaaaacccaaaattcccaattctcaccaaaactctgttaaac 29304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 27890613 - 27890696
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| |||||||||||||||||||||||||    
T  27890613 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagat 27890696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 27896946 - 27897029
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| |||||||||||||||||||||||||    
T  27896946 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagat 27897029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 27902852 - 27902935
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| |||||||||||||||||||||||||    
T  27902852 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagat 27902935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 27949271 - 27949354
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||| ||||||| |||| |||||  | | |||| || |||||||||||||| |||||| |||||||||||||||||||||||||    
T  27949271 gatgaacatcagtacggccagaattcaggtttttcccaaaaatcccattttccttccattcactccccaaatcagtttacagat 27949354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 19297264 - 19297378
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| || |||| |||||||||||||| | ||||||||||||| |||||| ||||  ||||| |||| ||||||  | | |||     
T  19297264 acgggcagaaaacaggttttccccaaaa-tcccatttttcttcaattcactccccaaattagtttatagatgtaaattgacttactgtatacattcagag 19297362  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  19297363 actatttctaacacca 19297378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 29298465 - 29298390
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||| | |||| ||  ||||||||||||| |||| | ||||||||||||| ||||||||||| ||||    
T  29298465 acgggcagaaaacaggtttttccccaaaatcccattttccttcaattcactccccaaattagtttacagatgcaaa 29298390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 29305015 - 29304949
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttaca 91  Q
    ||||||||||||| |||||| ||| ||||||||||||| |||| | ||||||||||||| ||||||||    
T  29305015 acgggcagaaaacagatttt-cctcaaaatcccattttccttcaattcactccccaaattagtttaca 29304949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 1803887 - 1803834
Alignment:
Q  40 ttttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacaga 93  Q
    ||||||| |||||||||||||||| || | ||||||||||||| ||||||||||    
T  1803887 ttttaccaaaaaatcccatttttcctcaattcactccccaaattagtttacaga 1803834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18680894 - 18680847
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  18680894 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 18680847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 22062952 - 22062905
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  22062952 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 22062905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 9272548 - 9272502
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||||| || | ||||||||||||| |||||||||||    
T  9272548 aaaaatcccatttttcctcaattcactccccaaattagtttacagat 9272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 27890793 - 27890823
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27890793 tcccaattctcaccaaaactctgttaaacac 27890823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 27897126 - 27897156
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27897126 tcccaattctcaccaaaactctgttaaacac 27897156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 27903032 - 27903062
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27903032 tcccaattctcaccaaaactctgttaaacac 27903062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 27949451 - 27949481
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  27949451 tcccaattctcaccaaaactctgttaaacac 27949481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 31418078 - 31418008
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||  | |||||| || |||||||||||||| |||| | |||||||||||||  ||||||||||    
T  31418078 acgggcagaatgcagatttttcccaaaaatcccattttccttcaattcactccccaaattggtttacagat 31418008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 20011512 - 20011443
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacaga 93  Q
    ||||||||||| | | ||||||| |||||||||| |||||||    |||||||||||| |||||||||||    
T  20011512 acgggcagaaagcaggttttacccaaaaatcccaattttcttaatttcactccccaaaacagtttacaga 20011443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31567231 - 31567155
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||  | | |||| || |||||||||||||||| || | ||||||||||||| || |||||||||    
T  31567231 tcagtacgggcagaatgcaggttttccccaaaaatcccatttttcctcaattcactccccaaattagcttacagata 31567155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31572452 - 31572376
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||  | | |||| || |||||||||||||||| || | ||||||||||||| || |||||||||    
T  31572452 tcagtacgggcagaatgcaggttttccccaaaaatcccatttttcctcaattcactccccaaattagcttacagata 31572376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 27037975 - 27038181
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27037975 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagacataaattaactttctg 27038074  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||||||||||||||||||||||||| ||||||||| || |||||| |||| ||  || |||| ||||||| || || | ||||||| |||||||||| |    
T  27038075 tatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccacaattcaacataaaacccaaaatccccaattttcaccaaaac-c 27038173  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  27038174 tgttaaac 27038181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 21605490 - 21605627
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  21605490 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 21605589  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  ||||||||||||||    
T  21605590 cctatttctaacatcaaattcatgcttacaacttcaaa 21605627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 1062446 - 1062643
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || | |   |||    
T  1062446 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctacgcaaccaga 1062544  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1062545 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacac 1062643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 1067840 - 1068037
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | || | |   |||    
T  1067840 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctacgcaaccaga 1067938  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    | ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1067939 aactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacac 1068037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 11359631 - 11359494
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  11359631 acgggcagaaaactggttttacccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacaaattaattttctgtatacacttagaa 11359532  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    |||||||||||||||||||||   ||||||||||||||    
T  11359531 cctatttctaacaccaaattcctgcttacaacttcaaa 11359494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 4070928 - 4070809
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4070928 acgggcagaaagctggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 4070829  T
Q  124 cctatttctaacaccaaatt 143  Q
    ||||||||||||| ||||||    
T  4070828 cctatttctaacatcaaatt 4070809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 24480986 - 24480849
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24480986 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 24480887  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaa 161  Q
    ||||||||||||| ||||||||  |||||||| |||||    
T  24480886 cctatttctaacatcaaattcatgcttacaacatcaaa 24480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 70901 - 70707
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||     
T  70901 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagag 70802  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||| ||||  | |  |||||| ||| |||||| || ||||||||| | |||||||| |||||||||    
T  70801 cctatttctaacatcaaattcatgcttacaactccaaaaactacaatttcaacatcaaaaccaaaattcccaatttttaccaaaac-ctgttaaac 70707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 31829358 - 31829556
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  31829358 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 31829456  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc--aattctcaccaaaactctgttaaacac 220  Q
    ||||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||||||    
T  31829457 acctaattctaaccccaaaatcaagcttacaacttcaaaatcatcattttatcataaaaacccattttccccaaattctcaccaacactctgttaaacac 31829556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 31834710 - 31834908
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  31834710 acgggcagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 31834808  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc--aattctcaccaaaactctgttaaacac 220  Q
    ||||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||||||    
T  31834809 acctaattctaaccccaaaatcaagcttacaacttcaaaatcatcattttatcataaaaacccattttccccaaattctcaccaacactctgttaaacac 31834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 2385311 - 2385115
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  2385311 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 2385213  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    | | | || ||||| |||| |||  ||||||| |||||| ||  ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  2385212 aaccaattataacatcaaaatcatgcttacaagttcaaaatccgcattttatcataaaaccccaaattcccaattctcaccaaaactctgttaaacac 2385115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 24426230 - 24426034
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | | | |||| |   |||    
T  24426230 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactcctcaaatcagtttacagatacataattaagtgt-tatatgcaaccaga 24426132  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    | | | |||||||| |||| |||  ||||||| |||||| || |||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  24426131 aaccaattctaacatcaaaatcatgcttacaagttcaaaatcctcattttatcataaaacccctaattcccaattctcaccaaaactctgttaaacac 24426034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 34790 - 34990
Alignment:
Q  18 atcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgta 116  Q
    ||||| ||||||||||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |    
T  34790 atcagtacgggcagaaaacaggtttttcctagaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgca 34888  T
Q  117 cttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgtta 215  Q
       |||| ||| |||||||| |||| |||  ||||||||||||||||| |||||| ||||||||| |||||  |||||||| ||||||||||| ||||||    
T  34889 accagaaactaattctaacatcaaaatcatgcttacaacttcaaattcctcattttatcataaaaccccaaaatcccaattcctcaccaaaac-ctgtta 34987  T
Q  216 aac 218  Q
    |||    
T  34988 aac 34990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 11466765 - 11466958
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||   |||| ||||||  |||||||||||||||||||||||||  || ||| ||| ||||||  ||| ||||    
T  11466765 acgggcagaaaactggtttttccccaaaatttaatttctcttcctttcactccccaaatcagtttacagatgtaatttatcttgctgtatacactcagaa 11466864  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  11466865 cctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaatcccaaaatcccaattctcaccaaaactctgttaaa 11466958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 36983954 - 36983756
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  36983954 acgggtagaaaactggttttacccaaaaatcccatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 36983856  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaattt--cccaattctcaccaaaactctgttaaacac 220  Q
    ||||| ||||||| ||||| |||  |||||||||||||| ||||||||| |||||||||||||  |||   | |||||||||||| ||||||||||||||    
T  36983855 acctaattctaaccccaaaatcaagcttacaacttcaaagtcatcattttatcataaaaacccctttttctcaaattctcaccaacactctgttaaacac 36983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 27272881 - 27273087
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||| ||||||| | | |||| || ||||||||| ||||||||| | ||||||||||||   ||||||||||   | ||||||| |||    
T  27272881 gatgaacatcagtacgagcagaaagcaggtttttcccaaaaatcccttttttcttcaattcactccccaaactggtttacagatgtgagttaacttactg 27272980  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||||||||||||||||| |||| |||   |||||||| |||| ||| |||| || ||||||| |||||  |||||||||||||||||||||    
T  27272981 tatgcactcagaacctatttctaacatcaaaatcatctttacaactccaaaatcaacattccaccataaaaccccaaaatcccaattctcaccaaaactc 27273080  T
Q  211 tgttaaa 217  Q
    |||||||    
T  27273081 tgttaaa 27273087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 4078165 - 4078339
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  4078165 acgggcagaaaactggtttttcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 4078263  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattc 198  Q
    ||||| |||||||| ||||  ||  |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  4078264 acctaattctaacatcaaaaacatgcttacaacttcaaaatcatcattctatcataaaaccccaaattcccaattc 4078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 23887748 - 23887586
Alignment:
Q  56 catttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaac 155  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |  | |||||||||||||||| ||||||||   |||||||    
T  23887748 catttttcttccaatcactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatgattacaac 23887649  T
Q  156 ttcaaattc-atcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||  | |  |||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  23887648 ttcaaaaactacaatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 23887586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 44090477 - 44090284
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  44090477 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 44090379  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | ||| |||||||| |||| |||   ||||||||||||| || |||||  ||||||||| |||||  |||||||| ||||||||||| ||||||||    
T  44090378 aactaattctaacatcaaaatcatgtttacaacttcaaaatcctcattctatcataaaaccccaaaatcccaattcctcaccaaaac-ctgttaaa 44090284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 20850935 - 20851010
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20850935 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 20851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 27730232 - 27730417
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  27730232 acgggcagaaaactggtttttcccaaaaatgtcatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 27730330  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaac 208  Q
    | ||| |||||||| |||| |||   ||||||||||||| || |||||  ||||||||| |||||  |||||||| |||||||||||    
T  27730331 aactaattctaacatcaaaatcatgtttacaacttcaaaatcctcattctatcataaaaccccaaaatcccaattcctcaccaaaac 27730417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 14564572 - 14564768
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||   | ||||||| ||||||| ||| | ||    
T  14564572 acgggcagaaaacaggtttttccctaaaatcccatttttcttcaattcactccccaaattagtttacagatgtgagttaacttactgtatgcactcataa 14564671  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatca-taaaaaccc-aatttcccaattctcaccaaaactctgttaaac 218  Q
    | ||||||||||| || | ||||  |  ||||| |||| ||||||||||||||  |||||||| || || | |||| |||||| |||||||||||||    
T  14564672 cttatttctaacatcagaatcacaatctcaactccaaaatcatcatttcatcaccaaaaacccaaaatttcaaattttcaccagaactctgttaaac 14564768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 22012500 - 22012332
Alignment:
Q  50 aaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | ||||     |||||||| ||||||||  ||| |||| |    
T  22012500 aaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcgaccagaacctaattctaacattaaaatcaccc 22012402  T
Q  149 ttacaacttcaaattcatcatttcatcataaaaaccc-aatttcccaattctcaccaaaactctgttaaac 218  Q
    |||||||| |||| || |||||| || |||||| ||| || | ||||||| |||||||||| |||||||||    
T  22012401 ttacaactccaaaatcctcattttataataaaaccccaaaatccccaattttcaccaaaac-ctgttaaac 22012332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 15642684 - 15642613
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15642684 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagata 15642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 17591927 - 17591857
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| ||| |||||||||||||||||| | ||||||||||||| |||||||||||    
T  17591927 acgggcagaaaacaggtttttcctcaaaatcccatttttcttcaattcactccccaaattagtttacagat 17591857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 30195901 - 30195812
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtat 113  Q
    |||||||||||||   |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| ||||||    
T  30195901 acgggcagaaaacatgtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtat 30195812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27786505 - 27786552
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  27786505 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 27786552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27791726 - 27791773
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  27791726 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 27791773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25174643 - 25174724
Alignment:
Q  19 tcagcacgggcagaaaactgattttacct-aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||| || |||||| ||  |||||||||||||| || | | ||||||||||||| ||||||||||| ||||    
T  25174643 tcagcacgggcagaatacagatttttccccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaa 25174724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 32910874 - 32910805
Alignment:
Q  26 gggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||| | |||| ||  ||||||||||||| || | ||||||||||||||| ||||||||||||    
T  32910874 gggcagaaaacaggtttttccccaaaatcccattttcctccaaatcactccccaaattagtttacagata 32910805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 10685002 - 10684955
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  10685002 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 10684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 12573120 - 12573167
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  12573120 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 12573167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 12579602 - 12579649
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  12579602 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 12579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 27295370 - 27295323
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  27295370 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 27295323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 36801298 - 36801369
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||| || ||||  | |||||||||||||| || | | ||||||||||||| ||||||||||||    
T  36801298 acgggcagaaaattggttttttccaaaaatcccattttcctccaattcactccccaaattagtttacagata 36801369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 28970618 - 28970552
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||  ||||||||||   || ||||||  |||||||||| |||||||||||||||||    
T  28970618 tcactccccaaattggtttacagatgtgaaataacttgttgtatgtactcagaacctatttctaaca 28970552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 25267970 - 25268054
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||| ||||||||||  | | |||| || |||||||| ||||| ||   | ||||||||||||||||||||||||||    
T  25267970 gatgaacatcagtacgggcagaatgcaggtttttcccaaaaatccaattttcctcaaattcactccccaaatcagtttacagata 25268054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 15331525 - 15331332
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  15331525 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 15331426  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  ||||||||||||||   |  |||||||||||||| || || | |||||||   |||||||| |||||||||    
T  15331425 cctatttctaacatcaaattcatgcttacaacttcaaaactacaatttcatcataaaacccaaaatccccaatttctaccaaaac-ctgttaaac 15331332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 17310408 - 17310601
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  17310408 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaa 17310507  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| ||||||||  | ||||||||||||   |  |||||||||||||| || || | ||||||| | |||||||| |||||||||    
T  17310508 cctatttctaacatcaaattcatgcctacaacttcaaaactacaatttcatcataaaacccaaaatccccaatttttaccaaaac-ctgttaaac 17310601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 25315064 - 25314929
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  25315064 gatgaacatcagtacgggcagaaaactgatttttccccaaaatcccatttttcttccaaacactccccaaatcagtttacagatgcaaattaactttctg 25314965  T
Q  111 tatgtacttagaacctatttctaacaccaaattcac 146  Q
    |||||||||||||||||||||||||| |||||||||    
T  25314964 tatgtacttagaacctatttctaacatcaaattcac 25314929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 26202558 - 26202423
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| |||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26202558 gatgaacatcagtacgggcagaaaactgatttttccccaaaatcccatttttcttccaaacactccccaaatcagtttacagatgcaaattaactttctg 26202459  T
Q  111 tatgtacttagaacctatttctaacaccaaattcac 146  Q
    |||||||||||||||||||||||||| |||||||||    
T  26202458 tatgtacttagaacctatttctaacatcaaattcac 26202423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 19096194 - 19095998
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  19096194 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 19096096  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    | | | |||||||| |||| |||  ||||||| |||||| || |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19096095 aaccaattctaacatcaaaatcatgcttacaagttcaaaatcctcattttatcataaaaccccaaattcccaattctcaccaaaactctgttaaacac 19095998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 29159760 - 29159956
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | | | |||| |   |||    
T  29159760 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacatatacataattaagtgt-tctatgcaaccaga 29159858  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    | | | |||||||| |||| |||  ||||||| |||||| || |||||| |||||||||  |||| ||||||||||||||||||||||||||||||||    
T  29159859 aaccaattctaacatcaaaatcatgcttacaagttcaaaatcctcattttatcataaaactccaaattcccaattctcaccaaaactctgttaaacac 29159956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 93923 - 93729
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||| | ||||||||||||||||||||||| |   | ||||||| ||||||| ||| ||||    
T  93923 acgggcagaaaacaggtttttccccaaaatccaatttttcttcaattcactccccaaatcagtttacaggtgtgagttaacttactgtatgcactcagaa 93824  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| || | ||||  || ||||| |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||||||||||    
T  93823 cctatttctaacatcagaatcacaatttcaactccaaaatcatcatttcatcataaaaccccaaaatcccaattcactccaaaactctgttaaac 93729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 8069100 - 8068907
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| | | | |||| |   |||    
T  8069100 acgggcagaaaactgattttttccaaaaatcccatttttcttcaaatcactccccaaattagtttacagatacataattaagtgt-tttatgcaaccaga 8069002  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||| |||||||| ||||||||   |||||||| |||| ||| ||||| ||||||||| |||||  ||||||||||||| ||||||||||||||    
T  8069001 acctaattctaacatcaaattcatcattacaactccaaaatcaacattttatcataaaatcccaaaatcccaattctcactaaaactctgttaaa 8068907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 25559341 - 25559216
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||| ||| ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25559341 gatgaacaccagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaattaactttctg 25559242  T
Q  111 tatgtacttagaacctatttctaaca 136  Q
    | || |  ||||||||||||||||||    
T  25559241 tgtgcaactagaacctatttctaaca 25559216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 29926437 - 29926631
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||| |||||||||||||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||  ||||||||| ||||||| ||| ||||    
T  29926437 acgggtagaaaactgatttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagatatgaattaacttactgtatgcactcagaa 29926536  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||  || |  |||   | | ||  |||| |||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||    
T  29926537 cctatttctaacttcagaaccacaacttccaccccaaaatcatcatttcatcacaaaaacccataattcccaattctcaccaaaac-ctgttaaac 29926631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 17882209 - 17882013
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||| ||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||   | ||||||| ||||||| ||| | ||    
T  17882209 acgggtagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtgagttaacttactgtatgcactcataa 17882110  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaacac 220  Q
    ||||||||||||  |||| |||   |  ||||| |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||||||||||||    
T  17882109 cctatttctaacttcaaaatcatcatctcaactccaaaatcatcatttcatcataaaaccccaaaatcccaattcactccaaaactctgttaaacac 17882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 34133385 - 34133175
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata-caaattaactttct 109  Q
    |||| ||||||| ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| | | |    
T  34133385 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacctaactaagtgt-t 34133287  T
Q  110 gtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaac 208  Q
     |||| |   |||| ||| || |||| ||||| |||  || | ||  ||||| ||||||||| | ||||||||||||||||||| ||||||||||| |||    
T  34133286 ctatgcaaccagaaactaattataactccaaaatcatgctcataaactcaaaatcatcattttaccataaaaacccaatttcccaaattctcaccacaac 34133187  T
Q  209 tctgttaaacac 220  Q
    ||||||||||||    
T  34133186 tctgttaaacac 34133175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 30799092 - 30799019
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30799092 acgggcagaaaactggttttacccaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca 30799019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16223064 - 16222994
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  16223064 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 16222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 24363308 - 24363378
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  24363308 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 24363378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 24369899 - 24369969
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  24369899 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 24369969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 25464583 - 25464653
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  25464583 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 25464653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 17207151 - 17207040
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||| ||||||||||| | ||||||||||||| ||||||||||||  ||||||||| ||||||  ||| ||||    
T  17207151 acgggcagaaaacaggtttttccccaaaatctcatttttcttcaattcactccccaaattagtttacagatatgaattaacttgctgtatacactcagaa 17207052  T
Q  124 cctatttctaac 135  Q
    ||||||||||||    
T  17207051 cctatttctaac 17207040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 10470141 - 10470070
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  10470141 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagata 10470070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 10463492 - 10463429
Alignment:
Q  158 caaattcatcatttcatcataaaaacccaattt-cccaattctcaccaaaactctgttaaacac 220  Q
    |||| |||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  10463492 caaaatcatcattgcatcaccaaaacccaattttcccaattctcaccaaaactctgttaaacac 10463429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 13127689 - 13127618
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||| | |||| ||  |||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  13127689 acgggcagaaaacaggtttttccccaaaatctcatttttcttcaaatcactccccaaattagtttacagata 13127618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 18786899 - 18786970
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    |||||||||||||||||||||||||   || |||  | ||||||| ||||||||||||||||||||||||||    
T  18786899 tcactccccaaatcagtttacagatgtgaaataaaatactgtatgcacttagaacctatttctaacaccaaa 18786970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 10463626 - 10463556
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||| |||||||||| |||| ||  ||||||||||||||||||   |||||||||||||||||||||||||    
T  10463626 acggtcagaaaactggtttttccccaaaatcccatttttcttcttttcactccccaaatcagtttacagat 10463556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 19468650 - 19468719
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacacca 139  Q
    |||||||||||||  ||||||||||   || |||||| ||||||| ||| ||||||||||||||||||||    
T  19468650 tcactccccaaattggtttacagatgtgaaataacttgctgtatgcactcagaacctatttctaacacca 19468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 27768127 - 27768174
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagataca 97  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  27768127 aaaatcccatttttcttcaaatcact-cccaaattagtttacagataca 27768174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 1593539 - 1593586
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  1593539 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 1593586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 12446584 - 12446497
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    |||||||||||||||  | | |||||||||||||||||||||||||   || |||||| |||| | |||| ||||| |||||| ||||    
T  12446584 aaaatcccatttttccccaattcactccccaaatcagtttacagatgtgaaataacttgctgtctatactcagaacatatttccaaca 12446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 14033952 - 14033999
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||    
T  14033952 aaaaatcccatttttcctcaattcactccccaaattagtttacagata 14033999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 14581380 - 14581333
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||||||||| || ||||||||||  |||||||||||    
T  14581380 aaaaatcccatttttcttccattctctccccaaattggtttacagata 14581333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 19727416 - 19727463
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||| |||||| || | ||||||||||||||||||||||||||||    
T  19727416 aaaaatctcattttcctccaaatcactccccaaatcagtttacagata 19727463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 21724124 - 21724077
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  21724124 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 21724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 23020749 - 23020698
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||    
T  23020749 aaaaatctcatttttcttcaattcactccccaaattagtttacagatgcaaa 23020698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 23835836 - 23835912
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||  | | |||| || |||||||||||||||| || | ||||||||||||| || |||||||||    
T  23835836 tcagtacgggcagaatgcaggttttccccaaaaatcccatttttcctcaattcactccccaaattagcttacagata 23835912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 3093 - 3221
Alignment:
Q  93 atacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttc- 191  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  3093 atacaaattaactttctgtatgcacttagaacttatttctaacaccaaattcacacttacaacttcaaattcatcatttcatcataaaaacccaatttca 3192  T
Q  192 ccaattctcaccaaaactctgttaaacac 220  Q
    | |||||||||||||||||||||||||||    
T  3193 caaattctcaccaaaactctgttaaacac 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 14637 - 14444
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||  |||||  ||| ||||    
T  14637 acgggcagaaaactgatttttccccaaaatcccatttttcttccattcactccccaaatcggtttacagatgtaaattaacttgttgtatccactcagaa 14538  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    ||||||||||||| |||| |||   |||||||| |||| ||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  14537 cctatttctaacatcaaaatcatcattacaactccaaaatcaacatttcatcataaaaccccaaaatcccaattctcaccaaaactctgttaaa 14444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 2000 - 2210
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttct 109  Q
    |||| ||||||| ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| || || ||| | | |    
T  2000 gatgaacatcagtacgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcataactaagtgt-t 2098  T
Q  110 gtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaac 208  Q
     |||| |   |||| ||| ||||||| ||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2099 ctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatcatcattttatcataaaaacccaatttcccaaattctcaccaaaac 2198  T
Q  209 tctgttaaacac 220  Q
    ||||||||||||    
T  2199 tctgttaaacac 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 11833 - 12026
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||| || |||| || ||||||| ||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||  ||| ||||    
T  11833 acgggcagaaaattggtttttcccaaaaatcgcatttttcttccattcactccccaaatcagtttacagatataagttaacttgctgtatacactcagaa 11932  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaa 217  Q
    || |||||||||| |||| |||| || |||||||||||| || || |||| ||||||| |||||  ||||||||||||| | ||||||||||||    
T  11933 cccatttctaacatcaaaatcacactcacaacttcaaatccaacaattcaacataaaatcccaaaatcccaattctcactacaactctgttaaa 12026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 1625 - 1829
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||  ||||||||||||||  |||| || ||||||| ||||||||||||| |||||||||||||||||||||||||  || ||||||| |||    
T  1625 gatgaacatcaatacgggcagaaaactagtttttcccaaaaatctcatttttcttccattcactccccaaatcagtttacagatgtaatttaacttgctg 1724  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||  ||| ||||||||||||||||| |||| |||| || |||||| |||| ||| || |||| ||||||| |||||  |||||||||||||||||| ||    
T  1725 tatacactcagaacctatttctaacatcaaaatcacactcacaactccaaaatcaacaattcaacataaaaccccaaaatcccaattctcaccaaaaatc 1824  T
Q  211 tgtta 215  Q
    |||||    
T  1825 tgtta 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 50746 - 50867
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||    
T  50746 acgggcagaaatctggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatggaaattaactttctgtatacacttagaa 50845  T
Q  124 cctatttctaacaccaaattca 145  Q
    |||||||||||||  |||||||    
T  50846 cctatttctaacattaaattca 50867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 21501 - 21303
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    |||| |||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| | |||| | | | || | |   |||    
T  21501 acggacagaaaactggttttacccaaaaatctcatttttctcccaatcactccccaaatcagtttacagatacatagttaagtgt-tctacgcaaccaga 21403  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttccc--aattctcaccaaaactctgttaaacac 220  Q
    ||||| ||||||| ||||| |||  |||||||| ||||| ||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||||||    
T  21402 acctaattctaaccccaaaatcaagcttacaacgtcaaaatcatcattttatcataaaaacccattttccccaaattctcaccaacactctgttaaacac 21303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 51285 - 51078
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||| | |||| || ||||||||||||||||||||| |||||||||||||  ||||||||||   | || |||| |||    
T  51285 gatgaacatcagtacgggcagaaaacaggtttttcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtgagttgacttactg 51186  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||| |||||| |||||| || | ||||  |  ||||| |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||    
T  51185 tatgcactcagagcctattcctaacatcagaatcacaatctcaactccaaaatcatcatttcatcataaaaccccaaaatcccaattcactccaaaactc 51086  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  51085 tgttaaac 51078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 64733 - 64526
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| ||||||| ||||||||||||| | |||| || ||||||||||||||||||||| |||||||||||||  ||||||||||   | || |||| |||    
T  64733 gatgaacatcagtacgggcagaaaacaggtttttcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtgagttgacttactg 64634  T
Q  111 tatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactc 210  Q
    |||| ||| ||| |||||| |||||| || | ||||  |  ||||| |||| ||||||||||||||||||| |||||  ||||||||| | |||||||||    
T  64633 tatgcactcagagcctattcctaacatcagaatcacaatctcaactccaaaatcatcatttcatcataaaaccccaaaatcccaattcactccaaaactc 64534  T
Q  211 tgttaaac 218  Q
    ||||||||    
T  64533 tgttaaac 64526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 16840 - 17010
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcact 147  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||  ||| ||||||||||||||||| ||||   ||     
T  16840 aaaaatcccatttttcttccattcactccccaaatcagtttacagatataagttaacttgctgtatacactcagaacctatttctaacatcaaaacaaca 16939  T
Q  148 cttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
     || | ||| ||||||||||||||| ||| |||| ||  | | ||||||| ||||||||||||||||||||    
T  16940 attcctactccaaattcatcatttcttcacaaaacccataatccccaattttcaccaaaactctgttaaac 17010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 1 - 109
Alignment:
Q  109 tgtatgtacttagaacctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaac 208  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| || || | ||||||| ||||||||||    
T  1 tgtatgtacttagaacctatttctaacatcaaattcacacttacaacttcaaattcatcattccatcataaaacccaaaatccccaattttcaccaaaac 100  T
Q  209 tctgttaaac 218  Q
     |||||||||    
T  101 -ctgttaaac 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 11643 - 11450
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagataca-aattaactttctgtatgtacttaga 122  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | | |||| |   |||    
T  11643 acgggcagaaaactggtttttcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaga 11545  T
Q  123 acctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaa 217  Q
    | | | || ||||| ||||  ||  |||||||||||||| || |||||  ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  11544 aaccaattataacatcaaaaacatgcttacaacttcaaaatcctcattctatcataaaaccccaaattcccaattcctcaccaaaac-ctgttaaa 11450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 31566 - 31761
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||||   |||| || ||||||||||||||||||| | ||||||||||||||||||||||||||  |||||| || ||||||  ||| ||||    
T  31566 acgggcagaaaacaagtttttcccaaaaatcccatttttcttcaattcactccccaaatcagtttacagatatgaattaagttgctgtatacactcagaa 31665  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| || |   ||  |  | |   |||| |||||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||    
T  31666 cctatttctaacatcagaacaacaatctctatcccaaaatcatcatttcatcacaaaaacccataattctcaattctcaccaaaactctgttaaac 31761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 19955 - 20149
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    |||||||||||||   |||| || |||||||||||||| |||| |  ||||||||||||  ||||||||||   ||||||| | |||||||  || ||||    
T  19955 acgggcagaaaaccagtttttcccaaaaatcccattttccttcaatccactccccaaattggtttacagatgtgaattaacctactgtatgctctcagaa 20054  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
    ||||||||||||| |||| |||   || ||||| |||| ||||||||||||||||||| |||||  || |||||| | |||||||||||||||||    
T  20055 cctatttctaacatcaaaatcatcattccaactccaaaatcatcatttcatcataaaaccccaaaatctcaattcactccaaaactctgttaaac 20149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 15881 - 16051
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcact 147  Q
    |||||||||||||| |||| |  ||||||||||||  ||||| ||||   ||||||| | |||||||  || ||||||||||| ||||| |||| |||      
T  15881 aaaaatcccattttccttcaatccactccccaaattggtttatagatgtgaattaacctactgtatgctctcagaacctatttttaacatcaaaatcatc 15980  T
Q  148 cttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
     || ||||| |||| |||||||||||||||||||  ||||  ||||||||| | |||||||||||||||||    
T  15981 attccaactccaaaatcatcatttcatcataaaacaccaaaatcccaattcactccaaaactctgttaaac 16051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 137844 - 138014
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||  ||||||||| ||||||  ||| |||||||||||||| || || |   || |    
T  137844 aaaatcccatttttcttcaattcactccccaaatcagtttacagatatgaattaacttgctgtatacactcagaacctatttctatcatcagaacaacac 137943  T
Q  149 ttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcacc-aaaactctgttaaac 218  Q
    |  ||||  |||| |||||||||||||| |||| || || | ||||||||||||| |||||||||||||||    
T  137944 tctcaaccccaaaatcatcatttcatcacaaaacccaaaatccccaattctcaccaaaaactctgttaaac 138014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 437 - 280
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||| ||| ||||  |  |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||   || | ||    
T  437 acgggcagaaatctggttttttcccaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaattaacttgctgtatactctcataa 338  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaa 181  Q
    ||||||||||||| |||| | |   |||||||| |||| ||| |||||||||||||||    
T  337 cctatttctaacatcaaaattatcattacaactccaaaatcaacatttcatcataaaa 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 14151 - 14226
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14151 acgggcagaaaactggtttttccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 14226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 17835 - 17765
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17835 acgggcagaaaactggtttttcctaaaaatcccattttccttccaatcactccccaaatcagtttacagat 17765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 32339 - 32497
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaattcactc 148  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||   || |||| |||||||||||| |||| | |       
T  32339 aaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaattaacttgctgtatactctcagaatctatttctaacatcaaaattatca 32438  T
Q  149 ttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaa 207  Q
    ||||||||  ||| ||| ||||||||||||||| ||  | | ||||||| |||||||||    
T  32439 ttacaactctaaaatcaacatttcatcataaaacccataatccccaattttcaccaaaa 32497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 7135 - 7065
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  7135 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 7065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 2748 - 2859
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||   ||||||||| || |||| | | ||||    
T  2748 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaaatcactccccaaattagtttacagatgtgaattaacttgctatatgcattcagaa 2847  T
Q  124 cctatttctaac 135  Q
    ||||||||||||    
T  2848 cctatttctaac 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 17941 - 17871
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  17941 acgggcagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttatagat 17871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 1 - 66
Alignment:
Q  29 cagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||    
T  1 cagaaaactggtttttcccaaaaatcccattttccttccaatcactccccaaatcagtttacagat 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 724 - 631
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    |||||||||||||| || | | ||||||||||||| |||||||||||||||| |||||| ||||||| ||| ||||| ||||||||||| ||||    
T  724 aaaaatcccattttcctccaattcactccccaaattagtttacagatacaaaataacttactgtatgcactcagaacgtatttctaacatcaaa 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 805 - 914
Alignment:
Q  27 ggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacct 126  Q
    |||||||||| | |||| ||  |||||||||||||||| | | ||||||||||||||||||||||||||  ||||||||| ||| ||  ||| |||||||    
T  805 ggcagaaaacaggtttttccccaaaatcccatttttctccaattcactccccaaatcagtttacagatatgaattaacttgctgcatacactcagaacct 904  T
Q  127 atttctaaca 136  Q
    ||||||||||    
T  905 atttctaaca 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 25389 - 25501
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||| | |||||||||||||  ||||||||||   ||||||||| ||||||  ||| ||||    
T  25389 acgggcagaaaactggtttttccccaaaatcccatttttcttcaattcactccccaaattggtttacagatgtgaattaacttgctgtatacactcagaa 25488  T
Q  124 cctatttctaaca 136  Q
    ||||||| |||||    
T  25489 cctatttttaaca 25501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 36057 - 36169
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||| | |||||||||||||  ||||||||||   |||||||||  |||||  ||| | ||    
T  36057 acgggcagaaaactggtttttccccaaaatcccatttttcttcaattcactccccaaattggtttacagatgtgaattaacttgatgtatacactcaaaa 36156  T
Q  124 cctatttctaaca 136  Q
    ||||||| |||||    
T  36157 cctatttttaaca 36169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 25522 - 25586
Alignment:
Q  157 tcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||| |||||||||| ||| |||| |||||  |||| ||| |||||||||||||||||||||||    
T  25522 tcaaaatcatcatttcctcacaaaaccccaaaatccccaatcctcaccaaaactctgttaaacac 25586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 36190 - 36254
Alignment:
Q  157 tcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||| |||||||||| ||| |||| |||||  |||| ||| |||||||||||||||||||||||    
T  36190 tcaaaatcatcatttcctcacaaaaccccaaaatccccaatcctcaccaaaactctgttaaacac 36254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 42597 - 42661
Alignment:
Q  157 tcaaattcatcatttcatcataaaaacccaatttccc-aattctcaccaaaactctgttaaacac 220  Q
    ||||| |||||||||| ||| |||| |||||  |||| ||| |||||||||||||||||||||||    
T  42597 tcaaaatcatcatttcctcacaaaaccccaaaatccccaatcctcaccaaaactctgttaaacac 42661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 105030 - 105145
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||  ||||| |||| |||| |  | ||||||    
T  105030 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaattgacttgctgtgtacatttagaa 105129  T
Q  124 cctatttctaacacca 139  Q
     |||||||||||||||    
T  105130 actatttctaacacca 105145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 4416 - 4286
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctg 110  Q
    |||| |||||||||||| |||||  | | |||| || ||||||| |||||| |||| | ||||||||||| | ||||||||||||| || |||||| |||    
T  4416 gatgaacatcagcacggacagaatgcaggtttttcccaaaaatctcattttccttcaattcactccccaatttagtttacagatacgaaataacttgctg 4317  T
Q  111 tatgtacttagaacctatttctaacaccaaa 141  Q
     ||| ||| ||||||||||||||||| ||||    
T  4316 gatgcactcagaacctatttctaacatcaaa 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 512001 - 511931
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| || ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  512001 acgggcagaaaacaggtttttcccaaaaatcccatttttcttcaaatcactccccaaattagtttacagat 511931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 179758 - 179808
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||| ||||    
T  179758 aaaatcccatttttcttcaattcactccccaaattagtttacagatgcaaa 179808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 160923 - 160846
Alignment:
Q  11 gatggacatcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagttt 88  Q
    |||| ||||||| |||| |||||| |||||||| || |||||||||||||| |||||| |||||||||||||||||||    
T  160923 gatgaacatcagtacggccagaaatctgatttttcccaaaaatcccattttccttccattcactccccaaatcagttt 160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 160744 - 160714
Alignment:
Q  190 tcccaattctcaccaaaactctgttaaacac 220  Q
    |||||||||||||||||||||||||||||||    
T  160744 tcccaattctcaccaaaactctgttaaacac 160714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 19537 - 19466
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||||||||||  ||||||||||||| || | | ||||||||||||| ||||||||||||    
T  19537 acgggcagaaaactgattttaccccaaaatcccattttcctccaattcactccccaaattagtttacagata 19466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 10496 - 10689
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaa 123  Q
    ||||||||||||||| |||| ||  |||||||||||||||||  | |||||||||||||   |||||||||   |||||||||  |||||  ||| ||||    
T  10496 acgggcagaaaactggtttttccccaaaatcccatttttctttaattcactccccaaattgatttacagatgtgaattaacttgatgtatacactcagaa 10595  T
Q  124 cctatttctaacaccaaattcactcttacaacttcaaattcatcatttcatcataaaaacccaatttcccaattctcaccaaaactctgttaaac 218  Q
     ||||||||||||||| |  ||| ||  | ||  |||| |||||||||||||| |||  |  ||||||||||||| | ||||||| |||||||||    
T  10596 actatttctaacaccagaaccacactctctaccccaaaatcatcatttcatcacaaacccataatttcccaattcactccaaaac-ctgttaaac 10689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 262 - 332
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||| | |||| ||  |||||||||||||||||| | ||||||||||||| |||||||||||    
T  262 acgggcagaaaacaggtttttccccaaaatcccatttttcttcaattcactccccaaattagtttacagat 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 396 - 456
Alignment:
Q  158 caaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||  ||||||||| | ||||||||||||||||||| ||||||||||    
T  396 caaaatcatcatttcatcccaaaaacccataattcccaattctcaccaaaa-tctgttaaac 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 7931 - 7977
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  7931 aaaaatcccatttttcttcaaatcactccccaaattagtttacagat 7977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 101081 - 100971
Alignment:
Q  25 cgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaac 124  Q
    |||||||||||||| |||| ||  |||||||||||| ||| | | |||||||||||||  ||||||||||   ||||||||| || |||| | | |||||    
T  101081 cgggcagaaaactggtttttccccaaaatcccatttctctccaattcactccccaaattggtttacagatgtgaattaacttgctatatgcattcagaac 100982  T
Q  125 ctatttctaac 135  Q
    |||||||||||    
T  100981 ctatttctaac 100971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 247886 - 247947
Alignment:
Q  158 caaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||  |||||||||    
T  247886 caaaatcatcatttcatcacaaaaacccatatttcccaattctcaccaaaaacctgttaaac 247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 247752 - 247827
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    ||||||||||||| | |||| || |||||||||||||||| || | ||||||||||||| | ||||||||| ||||    
T  247752 acgggcagaaaacaggtttttcccaaaaatcccatttttcctcaattcactccccaaattaatttacagatgcaaa 247827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 254398 - 254459
Alignment:
Q  158 caaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||| ||||||||| | |||||||||||||||||||  |||||||||    
T  254398 caaaatcatcatttcatcacaaaaacccatagttcccaattctcaccaaaaacctgttaaac 254459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 6974 - 7045
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    |||||||| |||||||||||||||||| || |||||| || |||| ||| | ||||||||||||||| ||||    
T  6974 tcactcccgaaatcagtttacagatacgaaataacttgctctatgcactcaaaacctatttctaacatcaaa 7045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 20349 - 20420
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||| |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||    
T  20349 acgggcagaaaactggtttttcccaaaaatctcattttcctccaattcactccccaaattagtttacagata 20420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 23235 - 23164
Alignment:
Q  24 acgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    ||||||||||||||| |||| || ||||||| |||||| || | | ||||||||||||| ||||||||||||    
T  23235 acgggcagaaaactggtttttcccaaaaatctcattttcctccaattcactccccaaattagtttacagata 23164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 162 - 217
Alignment:
Q  40 ttttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||||||||||| || | ||||||||||||| ||||||||||||    
T  162 ttttccctaaaaatcccatttttcctcaattcactccccaaattagtttacagata 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 62596 - 62541
Alignment:
Q  40 ttttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||| ||||||||||||||||| || | | ||||||||||||||||||||||||||    
T  62596 tttttcctaaaaatcccattttcctccaattcactccccaaatcagtttacagata 62541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 71891 - 71938
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||||    
T  71891 aaaaatcccatttttcctcaaatcactccccaaattagtttacagata 71938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 77545 - 77616
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacaccaaa 141  Q
    ||||||||||||| |||||| |||||| || ||||||  |||||| ||  ||||||||||||||||| ||||    
T  77545 tcactccccaaattagtttatagatacgaaataacttgttgtatgcacccagaacctatttctaacatcaaa 77616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 6580 - 6533
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  6580 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 13863 - 13816
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  13863 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 13816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 25595 - 25525
Alignment:
Q  148 cttacaacttcaaattcatcatttcatcataaaaacccaatttcccaatt-ctcaccaaaactctgttaaac 218  Q
    |||||||||||||| ||||||||| | ||||||| ||||| ||| ||||| ||||||||||| |||||||||    
T  25595 cttacaacttcaaaatcatcattttaacataaaaccccaaattctcaattcctcaccaaaac-ctgttaaac 25525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 50336 - 50289
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  50336 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 50289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 259483 - 259530
Alignment:
Q  48 aaaaatcccatttttcttccaatcactccccaaatcagtttacagata 95  Q
    |||||||||||||| || | | ||||||||||||||||||||||||||    
T  259483 aaaaatcccattttcctccaattcactccccaaatcagtttacagata 259530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 47212 - 47146
Alignment:
Q  70 tcactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaaca 136  Q
    ||||||||||||| |||||||||||   || |||||| ||||||| ||| | |||||||||||||||    
T  47212 tcactccccaaattagtttacagatgtgaaataacttgctgtatgcactcataacctatttctaaca 47146  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 41947 - 41992
Alignment:
Q  49 aaaatcccatttttcttccaatcactccccaaatcagtttacagat 94  Q
    |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  41947 aaaatcccatttttcttcaattcactccccaaattagttaacagat 41992  T

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Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 42056 - 42116
Alignment:
Q  158 caaattcatcatttcatcataaaaaccca-atttcccaattctcaccaaaactctgttaaac 218  Q
    |||| |||||||||||||  ||||||||| | |||||||||||||||||||| |||||||||    
T  42056 caaaatcatcatttcatcccaaaaacccataattcccaattctcaccaaaac-ctgttaaac 42116  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 16839 - 16759
Alignment:
Q  19 tcagcacgggcagaaaactgattttacctaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacaaa 99  Q
    |||||||||||||||  | | |||| ||  ||||||||||||| || | | ||||||||||||| ||||||||||| ||||    
T  16839 tcagcacgggcagaatgcaggtttttccccaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaa 16759  T

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