View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_601 (Length: 230)
Name: NF10145A_low_601
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_601 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20454524 - 20454753
Alignment:
| Q |
1 |
ggaggaggggttttggtggtgaagggttggagatgaacgatgattttggttctcttaatttgaatcttgggggtcaagtttaccctataatggatgggga |
100 |
Q |
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| T |
20454524 |
ggaggaggggttttggtggtgaagggttggagatgaacgatgattttggttctcttaatttgaatcttgggggtcaagtttaccctataatggatgggga |
20454623 |
T |
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| Q |
101 |
ggaaaagagtggtaaaaagacaaagattgcgcctgtgcctacttcaaatcgtgctgtttgtcaggtggaggattgtagggcggatcttagtaacgcaaag |
200 |
Q |
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| T |
20454624 |
ggaaaagagtggtaaaaagacaaagattgcgcctgtgcctacttcaaatcgtgctgtttgtcaggtggaggattgtagggcggatcttagtaacgcaaag |
20454723 |
T |
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| Q |
201 |
gactatcatcgtcgacacaaagtttgtgat |
230 |
Q |
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| T |
20454724 |
gactatcatcgtcgacacaaagtttgtgat |
20454753 |
T |
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