View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_625 (Length: 229)
Name: NF10145A_low_625
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_625 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38748954 - 38749183
Alignment:
| Q |
1 |
tcattatccatagtaactcctatataaaactgtatcacgaaataagagtaaaacagctgagagcataacctatagatgaaacaggttggttttaaagtta |
100 |
Q |
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| T |
38748954 |
tcattatccatagtaactcctatataaaactgtatcacgaaataagagtaaaacagctgagagcataacctatagatgaaacaggttggttttaaagtta |
38749053 |
T |
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| Q |
101 |
atggtgtg-tatcttaccttcattttttcagggtctttggaaacaaggaaagaatcagcaccaagtttgtcaatggcctcggtttccttgtttggagagg |
199 |
Q |
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| T |
38749054 |
atggtgtggtatcttaccttcattttttcagggtctttggaaacaaggaaagaatcagcaccaagtttgtcaatggcctcggtttccttgtttggagagg |
38749153 |
T |
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| Q |
200 |
tactaataacagtaaccttcagcccgaatg |
229 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
38749154 |
tactaataacagtaaccttcagcccgaatg |
38749183 |
T |
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