View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_643 (Length: 227)
Name: NF10145A_low_643
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_643 |
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Alignment Details
Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 40586180 - 40586365
Alignment:
| Q |
3 |
tggagctggagcaggagctggaggtggagttggataaggagcaagtggaactggcattataaaataactaagtcaaaagtattatttttctgtgccaaat |
102 |
Q |
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| T |
40586180 |
tggagctggagcaggagctggaggtggagttggataaggagcaagtggaactggcattataaaagaactaagtcaaaagtattatttttctgtgccaaat |
40586279 |
T |
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| Q |
103 |
tctacaaacagaacaaagcacttccattcattttttcaactcctggaaaaggaagaaatatagtaaaagattcattcaagagggag |
188 |
Q |
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| T |
40586280 |
tctacaaacagaacaaagcacttccatccattttttcaactcctggaaaaggaagaaatatagtaaaagattcattcaagagggag |
40586365 |
T |
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