View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_651 (Length: 226)
Name: NF10145A_low_651
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_651 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 50386246 - 50386458
Alignment:
| Q |
14 |
gaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatctcacctcactcatcatatttctccatccaccaactagtttcccaaca |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386246 |
gaataacaatgcctctaaaaacctattcaccaacaaatgcaactatttcaatttcacctcactcatcatatttctccatccaccaactagtttcccaaca |
50386345 |
T |
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| Q |
114 |
aaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgtatccat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50386346 |
aaccacatttctaagaaggatgtcaaaattgacaagataagtatagaccaagcaatttccttctacacaagaatcttgaaaaccaaagagttgtatccat |
50386445 |
T |
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| Q |
214 |
tagatatggacat |
226 |
Q |
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||||||||||||| |
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| T |
50386446 |
tagatatggacat |
50386458 |
T |
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