View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_666 (Length: 223)
Name: NF10145A_low_666
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_666 |
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Alignment Details
Target: chr6 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 18256615 - 18256433
Alignment:
| Q |
13 |
gatggacatcaatgtattgatcagtttcatccaatatatcttccttgaataatgaaaacaactatgtattagcaatcttatttatagaataaactgtatt |
112 |
Q |
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| T |
18256615 |
gatggacatcaatgtattgatcagtttcatccaatatatcttccttgaataatgaaaacaactatgtattagcaatcttatttatagtataaattgtatt |
18256516 |
T |
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| Q |
113 |
aacatgtgaaaatcgaattgctaattatttttataaggtgtctataatgataagaaagacaaacacagatgcgaacaccaaac |
195 |
Q |
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| T |
18256515 |
aacatgggaaaatcgaattgctaattatttttataaggtgtctataatgataagaaagataaacacagatgcgaacactaaac |
18256433 |
T |
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