View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_673 (Length: 222)
Name: NF10145A_low_673
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_673 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33762552 - 33762773
Alignment:
| Q |
1 |
gaccccaccacaattgaaccatctcctgtagttgcaaagcattgaaaatttgtccctcttgaaaattgatgcccctggttccaatgcaaaaccggagaat |
100 |
Q |
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| T |
33762552 |
gaccccaccacaattgaaccatctcctgtagttgcaaagcattgaaaatttgtccctcttgaaaattgatgcccctggttccaatgcaaaaccggagaat |
33762651 |
T |
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| Q |
101 |
tcgctgttgctatattctgaacaattccttttctatcacgcatatcccattgacatagcctattatcatccaaccctaaaaatgttgactccgaaggatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33762652 |
tcgctgttgctatattctgaacaattccttttctatcacgcatatcccattgacatagcctattatcatccaaccctaaaaatgttgactccgaaggatc |
33762751 |
T |
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| Q |
201 |
caattgtgaccctttagtatca |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
33762752 |
caattgtgaccctttagtatca |
33762773 |
T |
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