View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_677 (Length: 222)
Name: NF10145A_low_677
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_677 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 49085659 - 49085865
Alignment:
| Q |
1 |
aggctactgagattgttttgtttcaagttaccttcattattgatttacagtctgacttgaacactaatttgactcaacaatggttaactgtagtgtaggt |
100 |
Q |
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| T |
49085659 |
aggctactgagattgttttgtttcaagttaccttcattattgatttacagtctgacttgaacactaatttgactcaacaatggttaactgtagtgtaggt |
49085758 |
T |
|
| Q |
101 |
ctagtgaaatcaaattgtttttaatagcatttttagtgctttctgtcggcttgtttgttaattatattgactcattgactgtctcctaccaatttaggat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
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| T |
49085759 |
ctagtgaaatcaaattgtttttaatagcatttttagtgctttctgtcggcttgtttgttaattacattgactcattgactgtctcctacaaatttaggat |
49085858 |
T |
|
| Q |
201 |
tgtaatt |
207 |
Q |
| |
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||||||| |
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| T |
49085859 |
tgtaatt |
49085865 |
T |
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