View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10145A_low_700 (Length: 217)
Name: NF10145A_low_700
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10145A_low_700 |
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Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 3119839 - 3120005
Alignment:
| Q |
32 |
gacatcataaaacataaaacaagcaaagggatcagtcacacatatgtaagaaggatcaacacataattaactggcatgagaaagtcaatcggtcatcaac |
131 |
Q |
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| T |
3119839 |
gacatcataaaacattaaacaagcaaagggatcagtcacacatatgtaagaaggatcaacacataatcaactggcatgagaaagccaatcggtcatcaac |
3119938 |
T |
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| Q |
132 |
attaaacttttatctagaactaccacaaccacatcatactcaatcattctctgctataacgatatat |
198 |
Q |
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| T |
3119939 |
atgaaacttttatctagaactaccacaactacatcatactcaatcattggctactataacgatatat |
3120005 |
T |
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