View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_713 (Length: 214)

Name: NF10145A_low_713
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_713
NF10145A_low_713
[»] chr7 (52 HSPs)
chr7 (9-209)||(48805856-48806056)
chr7 (25-200)||(24794707-24794883)
chr7 (25-200)||(19339243-19339418)
chr7 (25-193)||(21381421-21381590)
chr7 (26-193)||(14425444-14425610)
chr7 (26-209)||(27871699-27871883)
chr7 (26-209)||(32264711-32264895)
chr7 (25-193)||(4411955-4412123)
chr7 (26-209)||(48062814-48062997)
chr7 (35-193)||(1293027-1293184)
chr7 (120-209)||(2265607-2265695)
chr7 (120-209)||(4821455-4821544)
chr7 (120-209)||(8182911-8183000)
chr7 (25-114)||(4429071-4429162)
chr7 (122-193)||(19711103-19711174)
chr7 (120-193)||(14426544-14426617)
chr7 (120-200)||(16111972-16112052)
chr7 (106-193)||(28409036-28409123)
chr7 (106-193)||(35952762-35952849)
chr7 (120-209)||(15467897-15467986)
chr7 (120-209)||(30944411-30944500)
chr7 (120-209)||(33691800-33691889)
chr7 (120-209)||(48236990-48237079)
chr7 (120-200)||(22578109-22578189)
chr7 (120-184)||(23280046-23280110)
chr7 (120-200)||(33605675-33605755)
chr7 (123-193)||(21283464-21283534)
chr7 (120-209)||(9069543-9069632)
chr7 (120-209)||(9709890-9709979)
chr7 (129-170)||(12174438-12174479)
chr7 (129-182)||(13648737-13648790)
chr7 (120-181)||(29935446-29935507)
chr7 (120-209)||(44467045-44467134)
chr7 (132-182)||(5000922-5000972)
chr7 (129-182)||(2913705-2913758)
chr7 (129-182)||(13018602-13018655)
chr7 (129-182)||(13880112-13880165)
chr7 (129-182)||(15088528-15088581)
chr7 (129-170)||(16310004-16310045)
chr7 (129-182)||(16316654-16316707)
chr7 (120-193)||(24788138-24788211)
chr7 (124-181)||(30945448-30945505)
chr7 (129-182)||(39284661-39284714)
chr7 (120-184)||(19237131-19237195)
chr7 (129-179)||(12366845-12366895)
chr7 (129-182)||(10883270-10883323)
chr7 (129-170)||(11792927-11792968)
chr7 (129-170)||(13137992-13138033)
chr7 (129-182)||(13730772-13730825)
chr7 (120-193)||(14193111-14193184)
chr7 (120-153)||(15704587-15704620)
chr7 (129-182)||(21692295-21692348)
[»] scaffold0387 (1 HSPs)
scaffold0387 (9-209)||(7366-7566)
[»] chr1 (44 HSPs)
chr1 (21-184)||(21204831-21204994)
chr1 (25-209)||(37642232-37642416)
chr1 (21-200)||(21135068-21135247)
chr1 (27-183)||(21984606-21984762)
chr1 (21-200)||(21120972-21121151)
chr1 (26-208)||(46088974-46089156)
chr1 (24-200)||(42284621-42284796)
chr1 (26-193)||(10250986-10251152)
chr1 (120-209)||(21702798-21702887)
chr1 (120-200)||(48570238-48570318)
chr1 (120-209)||(25448573-25448662)
chr1 (88-200)||(34255491-34255603)
chr1 (121-209)||(35040150-35040238)
chr1 (26-209)||(23024772-23024953)
chr1 (120-209)||(44821552-44821641)
chr1 (99-209)||(30572181-30572291)
chr1 (120-209)||(22600189-22600278)
chr1 (120-209)||(36134174-36134263)
chr1 (129-209)||(2327456-2327536)
chr1 (120-207)||(39200999-39201086)
chr1 (120-209)||(1900329-1900418)
chr1 (88-209)||(19215596-19215717)
chr1 (129-209)||(22153841-22153921)
chr1 (122-184)||(7745099-7745161)
chr1 (106-184)||(14263444-14263522)
chr1 (124-209)||(2268515-2268600)
chr1 (120-200)||(38282560-38282639)
chr1 (130-209)||(22427374-22427453)
chr1 (130-209)||(28492421-28492500)
chr1 (129-182)||(22201752-22201805)
chr1 (120-209)||(22464816-22464905)
chr1 (120-181)||(32785944-32786005)
chr1 (120-181)||(35401821-35401882)
chr1 (120-184)||(2834699-2834763)
chr1 (120-200)||(29215790-29215870)
chr1 (150-209)||(17371026-17371085)
chr1 (150-209)||(19170371-19170430)
chr1 (129-184)||(21191881-21191936)
chr1 (130-181)||(30893104-30893155)
chr1 (131-182)||(33256369-33256420)
chr1 (131-182)||(33276541-33276592)
chr1 (129-179)||(12284437-12284487)
chr1 (129-182)||(20954489-20954542)
chr1 (129-177)||(19717540-19717588)
[»] chr8 (48 HSPs)
chr8 (9-170)||(33560198-33560359)
chr8 (9-184)||(1745161-1745337)
chr8 (21-184)||(13430614-13430777)
chr8 (25-200)||(21301008-21301183)
chr8 (26-200)||(21288389-21288563)
chr8 (26-209)||(6407703-6407885)
chr8 (26-184)||(43639785-43639943)
chr8 (88-209)||(14989504-14989625)
chr8 (67-209)||(18151678-18151820)
chr8 (120-209)||(22673755-22673844)
chr8 (120-200)||(40845472-40845552)
chr8 (124-209)||(15336177-15336262)
chr8 (124-209)||(15425242-15425327)
chr8 (124-209)||(15516546-15516631)
chr8 (120-183)||(22663119-22663182)
chr8 (106-209)||(36105172-36105275)
chr8 (106-184)||(1237639-1237717)
chr8 (120-209)||(16207283-16207372)
chr8 (120-181)||(24551279-24551340)
chr8 (120-209)||(45538524-45538613)
chr8 (120-199)||(17797409-17797488)
chr8 (120-209)||(23185311-23185400)
chr8 (123-209)||(21932860-21932946)
chr8 (106-180)||(23263683-23263757)
chr8 (129-183)||(24833151-24833205)
chr8 (129-209)||(9320546-9320625)
chr8 (120-182)||(16188988-16189050)
chr8 (129-179)||(20382488-20382538)
chr8 (136-170)||(45292842-45292876)
chr8 (129-182)||(602814-602867)
chr8 (129-182)||(12757857-12757910)
chr8 (129-170)||(16681397-16681438)
chr8 (129-170)||(18679831-18679872)
chr8 (129-182)||(18719005-18719058)
chr8 (129-182)||(39693539-39693592)
chr8 (130-184)||(19943237-19943291)
chr8 (123-193)||(30421518-30421587)
chr8 (122-184)||(45567988-45568050)
chr8 (129-182)||(17267478-17267531)
chr8 (129-182)||(17441901-17441954)
chr8 (129-182)||(17914463-17914516)
chr8 (129-182)||(19156200-19156253)
chr8 (133-182)||(24646342-24646391)
chr8 (133-182)||(25164074-25164123)
chr8 (129-170)||(33082873-33082914)
chr8 (148-184)||(18685510-18685546)
chr8 (148-184)||(18722759-18722795)
chr8 (148-184)||(18731104-18731140)
[»] chr4 (45 HSPs)
chr4 (9-209)||(9751472-9751672)
chr4 (21-200)||(22190834-22191013)
chr4 (25-200)||(40860655-40860830)
chr4 (9-200)||(38513866-38514058)
chr4 (25-209)||(39419683-39419866)
chr4 (26-193)||(3499600-3499768)
chr4 (26-200)||(17398624-17398797)
chr4 (25-200)||(15475091-15475266)
chr4 (120-209)||(6517464-6517553)
chr4 (26-209)||(20977436-20977618)
chr4 (120-200)||(3105462-3105542)
chr4 (129-184)||(56533114-56533169)
chr4 (120-170)||(16940034-16940084)
chr4 (106-184)||(54679934-54680012)
chr4 (120-209)||(10692830-10692919)
chr4 (120-209)||(10906596-10906685)
chr4 (120-209)||(25651147-25651235)
chr4 (120-193)||(29121365-29121438)
chr4 (129-209)||(14604959-14605039)
chr4 (120-199)||(37435578-37435657)
chr4 (26-184)||(27188588-27188745)
chr4 (120-209)||(19884681-19884770)
chr4 (120-184)||(413006-413070)
chr4 (122-209)||(1672368-1672455)
chr4 (122-209)||(1674843-1674930)
chr4 (129-184)||(8105641-8105696)
chr4 (103-209)||(45833373-45833479)
chr4 (129-182)||(3395596-3395649)
chr4 (129-182)||(12601107-12601160)
chr4 (120-209)||(13576157-13576246)
chr4 (124-209)||(16853482-16853567)
chr4 (129-182)||(37985664-37985717)
chr4 (129-182)||(55380296-55380349)
chr4 (129-184)||(6641688-6641743)
chr4 (129-179)||(19621113-19621163)
chr4 (120-182)||(22675563-22675625)
chr4 (129-170)||(9140930-9140971)
chr4 (129-182)||(40846105-40846158)
chr4 (123-199)||(10072924-10073000)
chr4 (148-185)||(8685514-8685551)
chr4 (129-170)||(16632458-16632499)
chr4 (133-182)||(19666378-19666427)
chr4 (129-182)||(19911933-19911986)
chr4 (130-182)||(12811228-12811280)
chr4 (120-184)||(17247248-17247312)
[»] chr5 (46 HSPs)
chr5 (21-200)||(35931974-35932153)
chr5 (25-200)||(35986204-35986379)
chr5 (25-200)||(21660202-21660377)
chr5 (26-209)||(10848754-10848937)
chr5 (68-209)||(9088950-9089091)
chr5 (26-193)||(28464313-28464479)
chr5 (26-209)||(25930129-25930312)
chr5 (120-209)||(11993869-11993958)
chr5 (120-209)||(30115904-30115993)
chr5 (106-209)||(30742962-30743064)
chr5 (120-193)||(3245508-3245581)
chr5 (120-209)||(4887003-4887092)
chr5 (120-209)||(28139588-28139677)
chr5 (120-209)||(29138473-29138562)
chr5 (129-209)||(33933248-33933328)
chr5 (129-209)||(14086615-14086695)
chr5 (106-209)||(33022645-33022748)
chr5 (120-209)||(7745760-7745849)
chr5 (120-209)||(15516951-15517039)
chr5 (120-209)||(26759131-26759219)
chr5 (120-184)||(26765504-26765568)
chr5 (129-209)||(42243662-42243741)
chr5 (88-184)||(23391637-23391734)
chr5 (129-182)||(23413050-23413103)
chr5 (129-182)||(26784362-26784415)
chr5 (120-209)||(31117858-31117947)
chr5 (129-181)||(19536377-19536429)
chr5 (122-209)||(11208055-11208141)
chr5 (129-183)||(642783-642837)
chr5 (120-210)||(13545579-13545669)
chr5 (122-184)||(32160772-32160834)
chr5 (129-182)||(89498-89551)
chr5 (129-182)||(6499247-6499300)
chr5 (129-182)||(12352871-12352924)
chr5 (148-209)||(20550876-20550937)
chr5 (129-170)||(21072316-21072357)
chr5 (129-182)||(21910564-21910617)
chr5 (129-182)||(41566510-41566563)
chr5 (150-209)||(23478350-23478409)
chr5 (129-170)||(6512504-6512545)
chr5 (129-182)||(9398810-9398863)
chr5 (129-182)||(17814976-17815029)
chr5 (130-182)||(21199080-21199132)
chr5 (129-181)||(23881076-23881128)
chr5 (148-184)||(25096921-25096957)
chr5 (148-184)||(25154891-25154927)
[»] chr6 (38 HSPs)
chr6 (26-200)||(19065999-19066173)
chr6 (9-209)||(26589584-26589787)
chr6 (120-209)||(22076482-22076571)
chr6 (120-184)||(21618254-21618318)
chr6 (107-209)||(33351989-33352090)
chr6 (99-184)||(12349003-12349088)
chr6 (120-193)||(12423262-12423335)
chr6 (120-209)||(16336112-16336201)
chr6 (120-209)||(29918002-29918091)
chr6 (26-209)||(17316507-17316689)
chr6 (123-193)||(15954704-15954774)
chr6 (124-209)||(16877198-16877283)
chr6 (120-209)||(17381506-17381595)
chr6 (120-209)||(20487993-20488082)
chr6 (98-193)||(19482753-19482848)
chr6 (129-184)||(19833117-19833172)
chr6 (106-209)||(32544250-32544353)
chr6 (120-193)||(9717844-9717917)
chr6 (120-209)||(15531699-15531788)
chr6 (120-209)||(21235109-21235199)
chr6 (129-182)||(19086170-19086223)
chr6 (120-209)||(22802126-22802215)
chr6 (129-182)||(24116840-24116893)
chr6 (155-210)||(11206075-11206130)
chr6 (130-209)||(13435517-13435596)
chr6 (106-193)||(20730765-20730852)
chr6 (148-199)||(26943571-26943622)
chr6 (103-209)||(16265208-16265314)
chr6 (120-209)||(14100515-14100603)
chr6 (120-181)||(21625114-21625175)
chr6 (106-170)||(19688790-19688854)
chr6 (106-209)||(26972289-26972390)
chr6 (129-182)||(12715504-12715557)
chr6 (129-182)||(15302212-15302265)
chr6 (129-170)||(15987257-15987298)
chr6 (129-182)||(18378326-18378379)
chr6 (120-209)||(18435541-18435630)
chr6 (129-182)||(20112784-20112837)
[»] chr3 (51 HSPs)
chr3 (26-200)||(21636662-21636836)
chr3 (26-209)||(21605646-21605829)
chr3 (26-170)||(40850991-40851135)
chr3 (26-209)||(46796360-46796542)
chr3 (26-200)||(30054209-30054383)
chr3 (129-209)||(2785049-2785128)
chr3 (26-209)||(49666398-49666580)
chr3 (120-209)||(22140748-22140837)
chr3 (120-209)||(53056813-53056902)
chr3 (120-184)||(14955436-14955500)
chr3 (120-200)||(24775620-24775700)
chr3 (130-209)||(5213562-5213640)
chr3 (26-209)||(9700029-9700211)
chr3 (119-209)||(18121707-18121797)
chr3 (119-209)||(18142837-18142927)
chr3 (27-183)||(21640877-21641041)
chr3 (88-209)||(1728069-1728190)
chr3 (120-209)||(11223548-11223636)
chr3 (124-209)||(11868253-11868338)
chr3 (120-209)||(29855393-29855482)
chr3 (120-209)||(47207690-47207779)
chr3 (120-200)||(40799867-40799947)
chr3 (124-181)||(20627521-20627578)
chr3 (129-209)||(33583214-33583293)
chr3 (121-200)||(25398342-25398421)
chr3 (106-200)||(49553561-49553655)
chr3 (120-209)||(2561172-2561261)
chr3 (129-182)||(20646165-20646218)
chr3 (120-209)||(47405507-47405596)
chr3 (129-170)||(50300246-50300287)
chr3 (106-170)||(13824092-13824156)
chr3 (129-200)||(16032518-16032589)
chr3 (120-183)||(38177729-38177792)
chr3 (120-182)||(28582117-28582179)
chr3 (133-182)||(12963184-12963233)
chr3 (129-182)||(41495010-41495063)
chr3 (134-198)||(6090727-6090791)
chr3 (129-181)||(14393099-14393151)
chr3 (129-181)||(16658713-16658765)
chr3 (122-181)||(11909112-11909171)
chr3 (120-179)||(14969341-14969400)
chr3 (130-181)||(17239018-17239069)
chr3 (133-184)||(37412614-37412665)
chr3 (129-180)||(37467346-37467397)
chr3 (129-167)||(13948362-13948400)
chr3 (148-193)||(12388986-12389031)
chr3 (148-209)||(12726344-12726405)
chr3 (129-170)||(13780679-13780720)
chr3 (129-182)||(22804118-22804171)
chr3 (129-182)||(31303397-31303450)
chr3 (129-182)||(49642857-49642910)
[»] chr2 (51 HSPs)
chr2 (25-200)||(23392605-23392780)
chr2 (27-209)||(31967983-31968164)
chr2 (37-200)||(40332075-40332237)
chr2 (35-209)||(14581494-14581667)
chr2 (27-209)||(28550858-28551039)
chr2 (26-200)||(22776227-22776400)
chr2 (26-200)||(22781605-22781778)
chr2 (26-199)||(44840423-44840594)
chr2 (26-209)||(1586971-1587153)
chr2 (26-181)||(3277037-3277192)
chr2 (50-184)||(22785618-22785751)
chr2 (121-209)||(31800920-31801008)
chr2 (120-199)||(28711730-28711809)
chr2 (120-209)||(22802440-22802528)
chr2 (129-209)||(30557362-30557441)
chr2 (99-183)||(34321947-34322031)
chr2 (120-199)||(35744032-35744111)
chr2 (132-209)||(33074205-33074282)
chr2 (120-183)||(38781404-38781467)
chr2 (120-182)||(19540422-19540484)
chr2 (129-182)||(24377107-24377160)
chr2 (120-209)||(31327998-31328086)
chr2 (120-209)||(31334719-31334807)
chr2 (129-170)||(45087225-45087266)
chr2 (129-209)||(6392613-6392692)
chr2 (106-184)||(6574141-6574220)
chr2 (120-170)||(20152067-20152117)
chr2 (129-182)||(13964019-13964072)
chr2 (129-182)||(18376947-18377000)
chr2 (129-182)||(21537289-21537342)
chr2 (129-182)||(25829140-25829193)
chr2 (120-181)||(28701261-28701322)
chr2 (129-182)||(30666995-30667048)
chr2 (129-182)||(39037683-39037736)
chr2 (129-170)||(40782495-40782536)
chr2 (120-179)||(22317602-22317661)
chr2 (132-182)||(10009794-10009844)
chr2 (155-209)||(24275181-24275235)
chr2 (148-185)||(19115086-19115123)
chr2 (129-170)||(20568791-20568832)
chr2 (133-182)||(23235013-23235062)
chr2 (129-182)||(25189404-25189457)
chr2 (129-182)||(30621222-30621275)
chr2 (129-182)||(30623843-30623896)
chr2 (148-185)||(44881170-44881207)
chr2 (130-182)||(22455032-22455084)
chr2 (133-181)||(24576042-24576090)
chr2 (129-209)||(24850707-24850787)
chr2 (130-182)||(25037301-25037353)
chr2 (130-182)||(25041408-25041460)
chr2 (148-184)||(26619161-26619197)
[»] scaffold0056 (2 HSPs)
scaffold0056 (25-209)||(34746-34930)
scaffold0056 (25-193)||(25607-25775)
[»] scaffold0045 (1 HSPs)
scaffold0045 (25-184)||(87542-87701)
[»] scaffold1359 (2 HSPs)
scaffold1359 (26-193)||(1699-1865)
scaffold1359 (120-193)||(692-765)
[»] scaffold0352 (1 HSPs)
scaffold0352 (25-184)||(763-922)
[»] scaffold0151 (1 HSPs)
scaffold0151 (9-114)||(11450-11555)
[»] scaffold0069 (1 HSPs)
scaffold0069 (25-200)||(5266-5442)
[»] scaffold0473 (1 HSPs)
scaffold0473 (25-200)||(2645-2808)
[»] scaffold0249 (1 HSPs)
scaffold0249 (26-209)||(17709-17891)
[»] scaffold0176 (1 HSPs)
scaffold0176 (120-209)||(9140-9229)
[»] scaffold0247 (1 HSPs)
scaffold0247 (106-209)||(25422-25525)
[»] scaffold0280 (1 HSPs)
scaffold0280 (120-209)||(2767-2856)
[»] scaffold0217 (3 HSPs)
scaffold0217 (120-209)||(22168-22257)
scaffold0217 (130-193)||(9561-9624)
scaffold0217 (120-200)||(19025-19105)
[»] scaffold0015 (2 HSPs)
scaffold0015 (120-193)||(60804-60877)
scaffold0015 (26-96)||(60910-60980)
[»] scaffold0012 (2 HSPs)
scaffold0012 (120-209)||(215534-215623)
scaffold0012 (155-209)||(127808-127862)
[»] scaffold0004 (3 HSPs)
scaffold0004 (120-209)||(211383-211472)
scaffold0004 (129-182)||(220250-220303)
scaffold0004 (148-184)||(244349-244385)
[»] scaffold0471 (1 HSPs)
scaffold0471 (106-209)||(3289-3392)
[»] scaffold0035 (2 HSPs)
scaffold0035 (130-209)||(99252-99331)
scaffold0035 (129-170)||(19518-19559)
[»] scaffold0439 (1 HSPs)
scaffold0439 (120-209)||(6777-6866)
[»] scaffold0005 (1 HSPs)
scaffold0005 (129-209)||(212339-212419)
[»] scaffold0171 (1 HSPs)
scaffold0171 (121-200)||(27467-27546)
[»] scaffold0251 (1 HSPs)
scaffold0251 (120-209)||(7690-7777)
[»] scaffold1331 (1 HSPs)
scaffold1331 (120-209)||(1736-1825)
[»] scaffold0043 (1 HSPs)
scaffold0043 (120-209)||(78403-78492)
[»] scaffold0414 (1 HSPs)
scaffold0414 (132-184)||(7205-7257)
[»] scaffold0207 (2 HSPs)
scaffold0207 (88-200)||(10714-10826)
scaffold0207 (88-199)||(20616-20727)
[»] scaffold0527 (1 HSPs)
scaffold0527 (120-163)||(7963-8006)
[»] scaffold0132 (1 HSPs)
scaffold0132 (122-209)||(38124-38210)
[»] scaffold0011 (1 HSPs)
scaffold0011 (122-209)||(164985-165072)
[»] scaffold0084 (3 HSPs)
scaffold0084 (122-184)||(384-446)
scaffold0084 (129-182)||(32497-32550)
scaffold0084 (129-182)||(49344-49397)
[»] scaffold0116 (1 HSPs)
scaffold0116 (120-209)||(21008-21097)
[»] scaffold0028 (1 HSPs)
scaffold0028 (120-209)||(5639-5728)
[»] scaffold0016 (1 HSPs)
scaffold0016 (88-184)||(734-831)
[»] scaffold0411 (1 HSPs)
scaffold0411 (129-200)||(12203-12274)
[»] scaffold0026 (2 HSPs)
scaffold0026 (129-180)||(7940-7991)
scaffold0026 (129-170)||(60040-60081)
[»] scaffold0211 (1 HSPs)
scaffold0211 (123-209)||(15662-15748)
[»] scaffold0426 (1 HSPs)
scaffold0426 (129-182)||(13583-13636)
[»] scaffold0227 (1 HSPs)
scaffold0227 (120-209)||(22661-22750)
[»] scaffold0023 (1 HSPs)
scaffold0023 (120-181)||(103585-103646)
[»] scaffold0003 (1 HSPs)
scaffold0003 (120-209)||(90092-90181)
[»] scaffold0479 (1 HSPs)
scaffold0479 (129-209)||(9954-10034)
[»] scaffold0065 (1 HSPs)
scaffold0065 (129-181)||(1703-1755)
[»] scaffold0220 (1 HSPs)
scaffold0220 (122-181)||(1836-1895)
[»] scaffold0161 (2 HSPs)
scaffold0161 (129-184)||(10154-10209)
scaffold0161 (129-184)||(14818-14873)
[»] scaffold0146 (1 HSPs)
scaffold0146 (130-181)||(15130-15181)
[»] scaffold0771 (1 HSPs)
scaffold0771 (129-167)||(502-540)
[»] scaffold0210 (1 HSPs)
scaffold0210 (129-199)||(1655-1725)
[»] scaffold0530 (1 HSPs)
scaffold0530 (129-170)||(2041-2082)
[»] scaffold0359 (1 HSPs)
scaffold0359 (129-182)||(5736-5789)
[»] scaffold0337 (1 HSPs)
scaffold0337 (129-182)||(14660-14713)
[»] scaffold0324 (1 HSPs)
scaffold0324 (129-182)||(9968-10021)
[»] scaffold0290 (1 HSPs)
scaffold0290 (129-182)||(18667-18720)
[»] scaffold0120 (2 HSPs)
scaffold0120 (148-209)||(36840-36901)
scaffold0120 (148-209)||(42104-42165)
[»] scaffold0022 (2 HSPs)
scaffold0022 (148-209)||(37387-37448)
scaffold0022 (148-209)||(135447-135508)
[»] scaffold1747 (1 HSPs)
scaffold1747 (148-184)||(1327-1363)
[»] scaffold1745 (1 HSPs)
scaffold1745 (148-184)||(48-84)
[»] scaffold0047 (1 HSPs)
scaffold0047 (129-181)||(9916-9968)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 48805856 - 48806056
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  48805856 gagatggaactcaagttttcaaaagctgtttcaaggactctaactcgcctagaaattacataagactggaggaatatggcaacggctagtttgaaatgca 48805955  T
Q  109 ttggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaag 208  Q
    ||||||  ||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||| |||||| | |||||    
T  48805956 ttggatgctatttcttcaaagagcgttgacatagtacgttcgtacaaagtgtacaaccactacttccactactctgattttgtctctgctacaagacaag 48806055  T
Q  209 a 209  Q
    |    
T  48806056 a 48806056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 24794707 - 24794883
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggat-attatttct 123  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||  ||||| ||    
T  24794707 tttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcct 24794806  T
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
      ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  24794807 caaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctac 24794883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 19339243 - 19339418
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||  ||||||||||||||||||||||||| | ||| ||||||||||||  ||| |||||||| ||| |||||||||||||||||  |  |||||    
T  19339243 tttcaaaacctgtttcaaggactctaactcgcctaaagattgcagaagactggaaaagtgtggcaacgactattttgaaatgcattggatgcttattctt 19339342  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  19339343 caaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgagtttgtctctgctac 19339418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 21381421 - 21381590
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||  ||| |||||||||||| |||||||||||||||||     |||||    
T  21381421 tttcaaaagttgtttcaaggactctaactcgcctaaagattgcagaagactggaaaagtgtggcaacggctattttgaaatgcattggatgcctattctt 21381520  T
Q  125 caatgagcgttgacatagtacgtttgtacg-aagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||| ||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||    
T  21381521 caaagagcgttgacatagtacgtctgtacgaaaatgtacaaccactacttccactactctgagtttgtct 21381590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 14425610 - 14425444
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || |||||||||| | ||| ||||||||||||  |||||||||||||||| |||||||||||||||||  |  ||||||    
T  14425610 ttcaaaagttgtttcaaggattcaaactcgccta-acattgcagaagactgganaagtatggcaacggctattttgaaatgcattggatgcttattcttc 14425512  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    || ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  14425511 aaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtct 14425444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 27871883 - 27871699
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || || || |||||||||| |||||| |||||  |||||||||||||||| |||||||||||||||||  |  ||||||    
T  27871883 ttcaaaagttgtttcaaggattcaaattcacctagaaattgcagaagtctggaatagtatggcaacggctattttgaaatgcattggatgcttattcttc 27871784  T
Q  126 aatg-agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || | |||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  27871783 aaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 27871699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 32264711 - 32264895
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||| ||||||||| || |||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||| ||  ||||||    
T  32264711 ttcaaaagttatttcaaggattcaaactcgcctagaaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgtttattcttc 32264810  T
Q  126 aatg-agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || | ||||||||||||||||||||||||  |||||||||||| ||  |||||| |||||  ||||||| |||||| | ||||||    
T  32264811 aaagaagcgttgacatagtacgtttgtacagagtgtacaaccagtacctccactgctctgtttttgtctctgctacaagacaaga 32264895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 4411955 - 4412123
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggat-attatttct 123  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||  |||||| |||||||||  ||| |||     
T  4411955 tttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagactggagaagtatgacaacggctaacttgaaaagcattggatgcttaattc- 4412053  T
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||| |||||||||||| || ||| |||||||| ||||||||||||| |||||||||||||  |||||||    
T  4412054 tcaaagagcgttgacattgtgcgtctgtacgaactgtacaaccactacttccactactctgtttttgtct 4412123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 48062814 - 48062997
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||| | || ||||||||||||||||   ||||||||||  |||||||||||| ||| ||||||| |||||||||  |  ||||||    
T  48062814 ttcaaaagttgtttcaagaattcaaactcgcctagaaattgtcgaagactggaaaagtatggcaacgactattttgaaaggcattggatgcttattcttc 48062913  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||  | ||||| |||||| | ||||||    
T  48062914 aaagagcgttgacatagtacgtttgtacgaagcgtacaaccactatctccattactctgtttctgtctctgctacaagacaaga 48062997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 1293184 - 1293027
Alignment:
Q  35 tgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgt 134  Q
    ||||||||||| || |||||| ||| ||||| || |||||||||  ||||| |||||  ||| ||||||| |||||||||  |  |||||||| ||||||    
T  1293184 tgtttcaaggattcaaactcgacta-aaattgcaaaagactggaaaagtatagcaacaactattttgaaaggcattggatgcttattcttcaaagagcgt 1293086  T
Q  135 tgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  1293085 tgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtct 1293027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 2265607 - 2265695
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  ||||||| |||||| | ||||||    
T  2265607 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactgctctg-ttttgtctttgctacaagacaaga 2265695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 4821544 - 4821455
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  4821544 ttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 4821455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 8183000 - 8182911
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  8183000 ttcttcaaagagcgttgacataatacgtctgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 8182911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 4429071 - 4429162
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggag--tatggcaacggctagtttgaaatgcattggat 114  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||| ||  ||||||||||||||  |||||| |||||||||    
T  4429071 tttcaaaagctgtttcaaggactctaactcgcctaaaaattgcagaagacaggagaagtatatggcaacggctaacttgaaaagcattggat 4429162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 19711103 - 19711174
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  19711103 cttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactatttccactactctgtttttgtct 19711174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 14426617 - 14426544
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||  |||||||    
T  14426617 ttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttttgtct 14426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 16111972 - 16112052
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  16111972 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctac 16112052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 28409123 - 28409036
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||    
T  28409123 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtct 28409036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 35952762 - 35952849
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||||| ||  ||| |||| ||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||  |||||||    
T  35952762 gcattggatgtttgttcatcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccattactctgtttttgtct 35952849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 15467986 - 15467897
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||| ||||||||||| ||  ||||||||||||| ||||||| |||||| | ||||||    
T  15467986 ttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctccactactctgaatttgtctctgctacaagacaaga 15467897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 30944411 - 30944500
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| | |||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  30944411 ttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 30944500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 33691800 - 33691889
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  33691800 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactctgtttttgtctctgctacaagacaaga 33691889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 48236990 - 48237079
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  48236990 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgctacaagacaaga 48237079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 22578109 - 22578189
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||| || ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  22578109 ttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctac 22578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 23280046 - 23280110
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||    
T  23280046 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctg 23280110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 33605755 - 33605675
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||  | ||||||| ||  ||||||| ||||||    
T  33605755 ttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactaccttcactactatgtttttgtctctgctac 33605675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 21283464 - 21283534
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||    
T  21283464 ttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtct 21283534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 9069632 - 9069543
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||| |||||| |||||  |||||||||||||||||||||||  |||||||||| |  ||||||| |||||| | ||||||    
T  9069632 ttcttcaaggagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactcagtttttgtctctgctacaagacaaga 9069543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 9709890 - 9709979
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||||||||||   ||||||||||||| ||||||||  |||||| |||||  ||||||| |||||| | ||||||    
T  9709890 ttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgctacaagacaaga 9709979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 12174438 - 12174479
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  12174438 gagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 12174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 13648790 - 13648737
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  13648790 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 13648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 29935446 - 29935507
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||| || |||||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  29935446 ttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 29935507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 44467134 - 44467045
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||| || ||| ||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  44467134 ttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 44467045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 5000922 - 5000972
Alignment:
Q  132 cgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  5000922 cgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 5000972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 2913705 - 2913758
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  2913705 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 2913758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 13018602 - 13018655
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  13018602 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 13880165 - 13880112
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  13880165 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 15088581 - 15088528
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  15088581 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 15088528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 16310004 - 16310045
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  16310004 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 16310045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 16316654 - 16316707
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||| |||||||  |||||||||||||||||||||||  ||||||||||    
T  16316654 gagcgttgaaatagtacaattgtacgaagtgtacaaccactatctccactactc 16316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 24788211 - 24788138
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| |||  |||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||    
T  24788211 ttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtct 24788138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 30945448 - 30945505
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||| ||||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  30945448 tcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 30945505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 39284661 - 39284714
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  39284661 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 39284714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 19237131 - 19237195
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||||||||| | |||  || ||||||||||||||||||||  ||||||||||||    
T  19237131 ttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccactacctccactactctg 19237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 12366845 - 12366895
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    |||||||||||||||||  ||||||||||| |||||||||||  |||||||    
T  12366845 gagcgttgacatagtacaattgtacgaagtatacaaccactacctccacta 12366895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 10883270 - 10883323
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||||||||||||||| |||||  ||||||||||    
T  10883270 gagcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactc 10883323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 11792968 - 11792927
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  11792968 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 11792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 13137992 - 13138033
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  13137992 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13138033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 13730772 - 13730825
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||| ||  ||||||||||    
T  13730772 gagcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactc 13730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 14193184 - 14193111
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||| ||| |||||   ||||||||||||||||||||||  || |||||||||  |||||||    
T  14193184 ttcttcaaagagcgttaacaaagtacaagtgtacgaagtgtacaaccactacctctactactctgtttttgtct 14193111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 15704587 - 15704620
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtac 153  Q
    |||||||| |||||||||||||||||||||||||    
T  15704587 ttcttcaaagagcgttgacatagtacgtttgtac 15704620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 21692348 - 21692295
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||| |||||||||||||||||  ||||||||||    
T  21692348 gagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactc 21692295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 7566 - 7366
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||    
T  7566 gagatggaactcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactgaaagagtgtggcaacggctagtttgaaatgca 7467  T
Q  109 ttggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaag 208  Q
    ||||||  || ||| |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||  |||||| | |||||    
T  7466 ttggatgctaattcatcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactacttccactactctgtttttgtccctgctacaagacaag 7367  T
Q  209 a 209  Q
    |    
T  7366 a 7366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21204831 - 21204994
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||| ||| |    
T  21204831 aagtttttaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgttaat 21204930  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21204931 tcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctg 21204994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 37642416 - 37642232
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||  || |||||    
T  37642416 tttcaaaagctgtttcaaggactctaactcgcctagaaattacagaagactggaagagtgtggcaacagctagtttgaaatgcattggatgctaattctt 37642317  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| |||||| | ||||||    
T  37642316 caaagagcgttgacatagtacgtttatacgaagtgtacaaccactacttccactactctgtttttgtctctgctacaagacaaga 37642232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 21135068 - 21135247
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  | ||||||||| |||| | |||||||||||||||  |  |    
T  21135068 aagttttcaaaagttgtttcaaggaatctaactcacctagaaattacagaagactggaaaaatatggcaacagctattctgaaatgcattggatgcttat 21135167  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  21135168 tcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactaaatccactactctgtttttgtctctgctac 21135247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 21984762 - 21984606
Alignment:
Q  27 tcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttca 126  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||| ||| |||| |||||||||||||||||  |  |||||||    
T  21984762 tcaaaagttgtttcaaggactctaactcgcctagatattgcagaacactggaaaagtatggaaacagctattttgaaatgcattggatgcttattcttca 21984663  T
Q  127 atgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21984662 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactct 21984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 21120972 - 21121151
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||  | |||||||||| ||| | |||||||||||||||  |  |    
T  21120972 aagttttcaaaagctgtttcaaggactctaactcacctagaaatcgcagaagactggaaaaatatggcaacgactattctgaaatgcattggatgcttat 21121071  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||| ||||||    
T  21121072 tcttcaaagagcgttgacatagtacgtttgtacgacgtgtacaaccactacttccactactctgtttttgtctctgctac 21121151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 46089156 - 46088974
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||| || |||||||||| ||||| ||||||||||||  |||||||||||| ||| ||||||| |||||||||  |  ||||||    
T  46089156 ttcaaaagctgtttcaaggattcaaactcgcctaaaaattgcagaagactggaaaagtatggcaacgactattttgaaaggcattggatgcttattcttc 46089057  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaag 208  Q
    || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||| |||||    
T  46089056 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctactagacaag 46088974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 42284796 - 42284621
Alignment:
Q  24 ttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttct 123  Q
    |||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||  | | ||||| || ||| |||||||||||||||||  | |||||    
T  42284796 ttttcaaaagctgtttcaaggactctaactcgcctaaagattgcagaagactggaaaattgtggca-cgactattttgaaatgcattggatgctttttct 42284698  T
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||| ||||||    
T  42284697 tcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactattatgagtttgtctctgctac 42284621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 10251152 - 10250986
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||| ||||| || |||||| ||| | ||| ||||||||||||  |||||  ||||||||| |||| || |||||||||  |  ||||||    
T  10251152 ttcaaaagttgtttaaaggattcaaactcgtcta-agattgcagaagactggaaaagtataacaacggctaatttggaaggcattggatgcttattcttc 10251054  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    || |||  |||||||||||||||||||||||||||||||||| ||  ||||||||||||  |||||||    
T  10251053 aaagagttttgacatagtacgtttgtacgaagtgtacaaccattatctccactactctgtttttgtct 10250986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 21702887 - 21702798
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  21702887 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 21702798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 48570238 - 48570318
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  48570238 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctac 48570318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 25448573 - 25448662
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  25448573 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 25448662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 88 - 200
Target Start/End: Original strand, 34255491 - 34255603
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    ||||| ||||||||||| |||||||||  | | || |||| |||||||||||| ||  || |||||||| ||||||||||||| ||||||||||||||||    
T  34255491 caacgactagtttgaaaagcattggatgctttatcctcaaagagcgttgacattgtgagtatgtacgaactgtacaaccactacttccactactctgagt 34255590  T
Q  188 ttgtctatgctac 200  Q
    |||||| ||||||    
T  34255591 ttgtctctgctac 34255603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 35040238 - 35040150
Alignment:
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  35040238 tcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 35040150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 23024953 - 23024772
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||| |  | |||||| ||||||| ||||||||| |   ||| | |||||| ||| ||||||| |||||||||  |  ||| ||    
T  23024953 ttcaaaagctgtttcaaggatttaatctcgcc-agaaattgcagaagacttggaaagt-tagcaacgactattttgaaaagcattggatgcttattcctc 23024856  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||  ||||||| |||||| | ||||||    
T  23024855 aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgtttttgtctctgctacaagacaaga 23024772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 44821552 - 44821641
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||  ||||||| |||||| | ||||||    
T  44821552 ttcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaactactatctccactactctgtttttgtctctgctacaagacaaga 44821641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 30572291 - 30572181
Alignment:
Q  99 ttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgct 198  Q
    |||||| ||||||||| ||  |||||  | |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||  ||||| | ||||    
T  30572291 ttgaaaagcattggatgtttattcttagaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctccactactctgtttttgtttctgct 30572192  T
Q  199 actacacaaga 209  Q
    || | ||||||    
T  30572191 acaagacaaga 30572181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 22600189 - 22600278
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22600189 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 22600278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 36134263 - 36134174
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  36134263 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 36134174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 2327456 - 2327536
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  2327456 gagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctggttttgtctctgctacaagacaaga 2327536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 39200999 - 39201086
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaa 207  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||| | |||||| ||||||    
T  39200999 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtttctgctacaacacaa 39201086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 1900418 - 1900329
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  ||||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  1900418 ttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 1900329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 19215717 - 19215596
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    ||||||||| ||||||| ||||| |||  |  ||| |||| |||||||||||||||  | |||||||||||||||||||||||  | ||||||||||  |    
T  19215717 caacggctattttgaaaagcatttgatgcttattcctcaaggagcgttgacatagtgtgattgtacgaagtgtacaaccactatctgcactactctgttt 19215618  T
Q  188 ttgtctatgctactacacaaga 209  Q
    |||||| |||||| | ||||||    
T  19215617 ttgtctctgctacaagacaaga 19215596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 22153921 - 22153841
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22153921 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 22153841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 7745099 - 7745161
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||| ||||||||||| ||||||||| ||| ||||||||||||||||  ||||||||||||    
T  7745099 cttcaaagagcgttgacaaagtacgtttatacaaagtgtacaaccactacctccactactctg 7745161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 14263444 - 14263522
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||| |  ||| |||| |||||||| || || |||||||||||||||||||||||||||  ||||||||||||    
T  14263444 gcattggatacttgttcctcaaagagcgttggcaaagcacgtttgtacgaagtgtacaaccactacctccactactctg 14263522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 2268600 - 2268515
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| |||||  |||||||||||||||||||||||  || |||||||||  ||||||| |||||| | ||||||    
T  2268600 tcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcgactactctgtttttgtctctgctacaagacaaga 2268515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 38282639 - 38282560
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||||| |||||  ||||||||||| |||||||||||  ||||||||||||  ||||||| ||||||    
T  38282639 ttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatctccactactctgtttttgtctctgctac 38282560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 22427374 - 22427453
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||| |||||  |||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  22427374 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgctacaagacaaga 22427453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 28492421 - 28492500
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||| |||||  |||||||||||||||||||||||  |||||||||| |  | ||||| |||||||| ||||||    
T  28492421 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagtttgtgtctctgctactagacaaga 28492500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 22201752 - 22201805
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  22201752 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 22201805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 22464816 - 22464905
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||   ||||||||||||||| ||||||  |||||||||||   ||||||| |||||| | ||||||    
T  22464816 ttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacatccactacctccactactctatttttgtctctgctacaagacaaga 22464905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 32785944 - 32786005
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||| || ||||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  32785944 ttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 32786005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 35401882 - 35401821
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||| ||||||||||| |||||  |||||| ||||||||||||||||  |||||||||    
T  35401882 ttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactact 35401821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 2834763 - 2834699
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| || |||||||| |||||| ||||||||| ||||||||||||   ||||||||||||    
T  2834763 ttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccactgcctccactactctg 2834699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 29215870 - 29215790
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||| | ||| |||||  ||||||||||||||||| |||||  ||||||||||||  ||||||| ||||||    
T  29215870 ttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcactagctccactactctgtttttgtctctgctac 29215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 17371085 - 17371026
Alignment:
Q  150 gtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||  ||||||||||||  |||||||| ||||| | ||||||    
T  17371085 gtacgaagtgtacaaccactacctccactactctgtttttgtctacgctacaagacaaga 17371026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 19170371 - 19170430
Alignment:
Q  150 gtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| |||||||||||||||| |||||||||||||  |||||||| ||||| | ||||||    
T  19170371 gtacaaagtgtacaaccactacttccactactctgtttttgtctacgctacaagacaaga 19170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 21191881 - 21191936
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| || |||||  |||||||||||||||||||||||  ||||||||||||    
T  21191881 gagcgttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctg 21191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 30893155 - 30893104
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||| |||||||||||  |||||||||||||||||||||||  |||||||||    
T  30893155 agcgctgacatagtacaattgtacgaagtgtacaaccactatctccactact 30893104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 33256369 - 33256420
Alignment:
Q  131 gcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  33256369 gcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 33256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 33276541 - 33276592
Alignment:
Q  131 gcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  33276541 gcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 33276592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 12284487 - 12284437
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    |||||||||||||||||  ||||||||||||||||| |||||  |||||||    
T  12284487 gagcgttgacatagtacaattgtacgaagtgtacaaacactatctccacta 12284437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 20954489 - 20954542
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||| ||||||||||||||||  ||||||||||    
T  20954489 gagcgttgacaaagtacaattgtaccaagtgtacaaccactatctccactactc 20954542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 19717588 - 19717540
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccac 177  Q
    ||||||||||| |||||  |||||||||||||||||| ||||| |||||    
T  19717588 gagcgttgacaaagtacaattgtacgaagtgtacaacaactaactccac 19717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 33560198 - 33560359
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  33560198 gagatggaactcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaagagtgtggcaacggctagtttgaaatgca 33560297  T
Q  109 ttggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||  || |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  33560298 ttggatgctaattcttcaaagagcgttgacataatacgtttgtacgaagtgtacaaccacta 33560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 1745337 - 1745161
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  1745337 gagatggaactcaagttttcaaaagttgtttcaaggactcttactcgcctagaaattacagaagactagaagagtgtggcaacggctagtttgaaatgca 1745238  T
Q  109 ttggatattatttcttcaatgagcgttgacatagtacgtttgtacg-aagtgtacaaccactaattccactactctg 184  Q
    ||||||  || | |||||| | ||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||    
T  1745237 ttggatgctaatacttcaaagtgcgttgacatagtacgtctgtacgaaagtgtacaacaactacttccactactctg 1745161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 13430614 - 13430777
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||  |||||| ||||||||| ||||||| |||||||||  |  |    
T  13430614 aagttttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagattagaaaagtatgacaacggctattttgaaacgcattggatgcttat 13430713  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13430714 tcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctg 13430777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 21301183 - 21301008
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| |||||||| |||||||||||||||| | ||| ||||||| ||||  |||||||||||||||| |||||||||||||||||  |   || |    
T  21301183 tttcaaaagctgtttcaatgactctaactcgcctaaagattgcagaagattggaaaagtatggcaacggctattttgaaatgcattggatgcttactcct 21301084  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||    
T  21301083 caaagagcgttgacatagtacgtttgtacaaagtgtacaaccactacttccactactctgagtttgtctctgctac 21301008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 21288563 - 21288389
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    ||||||| ||||||||  |||||||||||||||| | ||| ||||||||||||  |||||||||||||||| ||||||||| |||||||  |   || ||    
T  21288563 ttcaaaatttgtttcattgactctaactcgcctaaagattgcagaagactggaaaagtatggcaacggctattttgaaatgtattggatgcttactcctc 21288464  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || ||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  21288463 aaagagcgttgacatagttcgtttgtacgaagtgtacaaccactacttccactactttgagtttgtctctgctac 21288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 6407885 - 6407703
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||| ||||| || |||||| ||| | ||| ||||||||||||  |||||  ||||||||| |||| || |||||||||  || ||||||    
T  6407885 ttcaaaagctgtttaaaggattcaaactcgtcta-agattgcagaagactggaaaagtattacaacggctattttggaaggcattggatgctaattcttc 6407787  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  6407786 aaagagcgttgacatagtacgtttctacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 6407703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 43639943 - 43639785
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggat-attatttctt 124  Q
    |||||||||||||||||||| || |||||||||| ||||| || |||||||||  |||||| ||||| ||| ||||||| |||||| ||  |||||| ||    
T  43639943 ttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcaaaagactggaaaagtatgacaacgactattttgaaaggcattgaatgcttattt-tt 43639845  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||| ||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||    
T  43639844 caaagagcgttgacatgttacgtttgcacgaagtgtacaaccactatctccactactctg 43639785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 14989504 - 14989625
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    ||||||||| |||| || |||||||||  |  |||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||  |    
T  14989504 caacggctaatttggaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctccactactctgttt 14989603  T
Q  188 ttgtctatgctactacacaaga 209  Q
    |||||| |||||| | ||||||    
T  14989604 ttgtctctgctacaagacaaga 14989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 18151678 - 18151820
Alignment:
Q  67 cagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaacc 166  Q
    ||||||||||||  |||||  ||||| ||| |||| || |||||||||  |  |||||||| |||| ||||||||||||||||||||||| |||||||||    
T  18151678 cagaagactggaaaagtataacaacgactaatttggaaggcattggatgcttattcttcaaagagcattgacatagtacgtttgtacgaattgtacaacc 18151777  T
Q  167 actaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||  ||||||||||||  ||||||| |||||| | ||||||    
T  18151778 actatctccactactctgtttttgtctctgctacaagacaaga 18151820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22673844 - 22673755
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  22673844 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactttgtttttgtctctgctacaagacaaga 22673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 40845472 - 40845552
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  40845472 ttcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctac 40845552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 15336177 - 15336262
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  15336177 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctttgctacaagacaaga 15336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 15425242 - 15425327
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  15425242 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctttgctacaagacaaga 15425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 15516546 - 15516631
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  15516546 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctttgctacaagacaaga 15516631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 22663182 - 22663119
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  22663182 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccaatatctccactactct 22663119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 36105275 - 36105172
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||| ||||||||||||||| ||||||||||||||||  |||||| |||||  ||||||| |||||| | ||    
T  36105275 gcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacctccactgctctgtttttgtctctgctacaagac 36105176  T
Q  206 aaga 209  Q
    ||||    
T  36105175 aaga 36105172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 1237717 - 1237639
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||||  |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||  ||||||||||||    
T  1237717 gcattggatatttgttcttcaaagagcgttgacaaagtacttttgtgcgaagtgtacaaccactacctccactactctg 1237639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 16207372 - 16207283
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  16207372 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 16207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 24551340 - 24551279
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  24551340 ttcttcaaagagcgttaacatagtacgtttgtacgaagtgtacaaccactacctccactact 24551279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 45538524 - 45538613
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |  |||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  45538524 ttcttcaaagagcgttgacaaatcacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 45538613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 17797488 - 17797409
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||    
T  17797488 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgcta 17797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 23185311 - 23185400
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  |||||| |||||  ||||||| |||||| | ||||||    
T  23185311 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactgctctgtttttgtctctgctacaagacaaga 23185400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 21932946 - 21932860
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||| ||||||||||| ||||   |||||||||||||||||||||||  |||||||||| | |||||||| |||||| | ||||||    
T  21932946 ttcaaagagcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactcagtgtttgtctctgctacaagacaaga 21932860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 23263683 - 23263757
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactac 180  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||    
T  23263683 gcattggatgtttgttcttcaaagagcgttgacaaagtacagttgtacgaagtgtacaaccactacctccactac 23263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 24833151 - 24833205
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||| ||||||    
T  24833151 gagcgttgacatggtacgtttgtacgaagtgtacaaccactacctccattactct 24833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 9320625 - 9320546
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| ||||  ||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  9320625 gagcgttgacaaagtatatttgtacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 9320546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 16189050 - 16188988
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||| | ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  16189050 ttcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 16188988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 20382488 - 20382538
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    |||||||||||||||||  |||||||||||||||||||||||  |||||||    
T  20382488 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccacta 20382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 45292876 - 45292842
Alignment:
Q  136 gacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||||||||||||||||||||    
T  45292876 gacatagtacgtttgtacgaagtgtacaaccacta 45292842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 602814 - 602867
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  602814 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 602867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 12757857 - 12757910
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  12757857 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12757910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 16681397 - 16681438
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  16681397 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 16681438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 18679872 - 18679831
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  18679872 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 18679831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 18719058 - 18719005
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||| ||||||||  |||||||||||||||||||||||  ||||||||||    
T  18719058 gagcgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactc 18719005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 39693592 - 39693539
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  39693592 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 39693539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 19943291 - 19943237
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||| ||||   |||||||||||||||||||||||  ||||||||||||    
T  19943291 agcgttgacaaagtaaaattgtacgaagtgtacaaccactacctccactactctg 19943237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 30421518 - 30421587
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||| ||||||||||| ||||| || ||||||||| |||||||||||  ||||||||||||  |||||||    
T  30421518 ttcaaagagcgttgacaaagtacatt-gtacgaagtttacaaccactacctccactactctgtttttgtct 30421587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 45567988 - 45568050
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||| ||||||||||| ||||| | |||||||||||||| |||||||  | ||||||||||    
T  45567988 cttcaaagagcgttgacaaagtacttctgtacgaagtgtacgaccactaccttcactactctg 45568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 17267531 - 17267478
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||| ||||||||||||  ||||||||| |||||||||||||  ||||||||||    
T  17267531 gagcattgacatagtacaattgtacgaattgtacaaccactatctccactactc 17267478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 17441901 - 17441954
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||| ||||||||||||||||  ||||||||||    
T  17441901 gagcgttgacaaagtacaattgtactaagtgtacaaccactatctccactactc 17441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 17914516 - 17914463
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  17914516 gagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactc 17914463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 19156253 - 19156200
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||||||| |||||||||||||  ||||||||||    
T  19156253 gagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactc 19156200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 24646391 - 24646342
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  24646391 gttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 24646342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 25164123 - 25164074
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||| ||||||||  |||||||||||||||||||||||  ||||||||||    
T  25164123 gttgtcatagtacaattgtacgaagtgtacaaccactatctccactactc 25164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 33082914 - 33082873
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  33082914 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 18685510 - 18685546
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  18685510 ttgtacgaagtgtacaaccactatctccactactctg 18685546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 18722759 - 18722795
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  18722759 ttgtacgaagtgtacaaccactatctccactactctg 18722795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 18731104 - 18731140
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  18731104 ttgtacgaagtgtacaaccactatctccactactctg 18731140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 9751472 - 9751672
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  ||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  9751472 gagatggagctcaagttttcaaaacctgtttcaaggactctaactcgcctaaaaattacggaagactggaagagtgtggcaacggctagtttgaaatgca 9751571  T
Q  109 ttggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaag 208  Q
    ||||||  || |||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||  ||||||| |||||| | |||||    
T  9751572 ttggatgctaattcttcaaagagcgttgacatagtatgtttgcacgaagtgtacaaccactacttccactactctgtttttgtctctgctacaagacaag 9751671  T
Q  209 a 209  Q
    |    
T  9751672 a 9751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 22191013 - 22190834
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||||  |||||||||||  ||| |||||||||||||||||  |  |    
T  22191013 aagttttcaaaagctgtttcaaggactctaacttgcttagaaattgcagaagactggaaaagtatggcaacaactattttgaaatgcattggatgctgat 22190914  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  22190913 tcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctac 22190834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 40860830 - 40860655
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||| ||||| |||||||||||||||||  |  |||||    
T  40860830 tttcaaaagttgtttcaaggactataactcgcctagaaattgcagaagactggaaaagtatggcaatggctaatttgaaatgcattggatgcttattctt 40860731  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||  ||||||| ||||||    
T  40860730 caaagagcgttgacatagtacgtttgtatgatgtgtacaaccactacttccactactctgtttttgtctctgctac 40860655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 38514058 - 38513866
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaa-ttacagaagactggaggagtatggcaacggctagtttgaaatgc 107  Q
    ||||||||  ||||| ||||||||| ||||||||||||||||| ||||||| ||| ||| ||||||||||| |||| || ||||||||||||| ||||||    
T  38514058 gagatggaactcaagctttcaaaagctgtttcaaggactctaattcgcctataaaattaaagaagactggaagagtgtgacaacggctagtttaaaatgc 38513959  T
Q  108 attggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||  ||||||| ||||||    
T  38513958 attggatgttaattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactactttcactactctgtttttgtctctgctac 38513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 39419683 - 39419866
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||| |||||||| |||  || |||||    
T  39419683 tttcaaaagctgtttcaaggactctaactcgcctagaaattacaaaagactgaaagagtgtggcaacggctagtttggaatgcatttgatgctaattctt 39419782  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||| |||||| | ||||||    
T  39419783 caa-aagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccattactctgtttttgtctctgctacaagacaaga 39419866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 3499600 - 3499768
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaa-attacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    |||||||| ||||||||||| || | ||| || | || |||||||||||||||||||||||| |||||||||| ||||||| ||||||||  ||||||||    
T  3499600 ttcaaaagctgtttcaaggattcaagctcaccaaaaagattacagaagactggaggagtatgacaacggctagattgaaatacattggatgctatttctt 3499699  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  3499700 caatgagcgttgacatagtacatttgtacgaagtgtacaaccactacttctactactctgagtttgtct 3499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 17398624 - 17398797
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || |||||||||| ||||| ||||||||||||  ||||| |||||| ||| ||||||| |||||||||  |  ||||||    
T  17398624 ttcaaaagttgtttcaaggattcaaactcgccta-aaattgcagaagactggaaaagtatagcaacgactattttgaaaggcattggatgcttattcttc 17398722  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  17398723 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactaactccactactctgtttttgtctctgctac 17398797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 15475091 - 15475266
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||| | ||||||| ||| | ||| ||||||| | ||  |||||||||||||||| |||||||||||||||||  |   || |    
T  15475091 tttcaaaagctgtttcaaggattttaactcgtctaaagattgcagaagagtagaaaagtatggcaacggctattttgaaatgcattggatgcttactcct 15475190  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  15475191 caaagagcgttgacatagtacgtttatacgaagtgtacaaccaatacttccactactctgagtttgtctctgctac 15475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 6517553 - 6517464
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  6517553 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 6517464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 20977618 - 20977436
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || | ||||||   ||||| ||||||||| |   ||| |  ||||||||| ||||||| |||||||||  |  ||| ||    
T  20977618 ttcaaaagttgtttcaaggattcaagctcgccagaaaattgcagaagacttggaaagt-taacaacggctattttgaaaagcattggatgcttattcctc 20977520  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||  ||||||| |||||| | ||||||    
T  20977519 aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgtttttgtctctgctacaagacaaga 20977436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 3105462 - 3105542
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  3105462 ttcttcaaagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctac 3105542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 56533114 - 56533169
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  56533114 gagcgttgacaaagtacgtttgtacgaagtgtacaaccactacttccactactctg 56533169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 16940084 - 16940034
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16940084 ttcttcaaggagcgttgacatagtacgtttgtacgaagtgtacaaccacta 16940034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 54680012 - 54679934
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||| ||  |||||||| |||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  54680012 gcattggatgtttgttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctg 54679934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 10692919 - 10692830
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||| ||| |||||||||||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  10692919 ttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 10692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 10906685 - 10906596
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||| ||| |||||||||||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  10906685 ttcttcaaagagcgtttacaaagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 10906596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 25651147 - 25651235
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  25651147 ttcttcaaagagcgttgacgtagtacgtttgtacaaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 25651235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 29121438 - 29121365
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  29121438 ttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtct 29121365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 14604959 - 14605039
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  14604959 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgctacaagacaaga 14605039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 37435578 - 37435657
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||||  ||||||||| ||  ||||||| |||||    
T  37435578 ttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccactacctccactactttgtttttgtctctgcta 37435657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 27188588 - 27188745
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || | ||||||   ||||| ||||||||| |   ||| |  ||||| ||| ||||||| |||||||||  |  ||| ||    
T  27188588 ttcaaaagttgtttcaaggattcaagctcgccagaaaattgcagaagacttggaaagt-taacaacgactattttgaaaagcattggatgcttattcctc 27188686  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    || ||||||||||||||| ||||||||||||||||| ||||||||  | ||||||||||    
T  27188687 aaggagcgttgacatagtgcgtttgtacgaagtgtataaccactatctgcactactctg 27188745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 19884770 - 19884681
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||| ||||  ||||||| |||||| | ||||||    
T  19884770 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactaatctgtttttgtctctgctacaagacaaga 19884681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 413070 - 413006
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||   ||||||||||||    
T  413070 ttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactgcctccactactctg 413006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 1672455 - 1672368
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| || |||||||| | ||||||||||||||||||||||||||||  ||||||||||||   ||||||| ||||| | ||||||    
T  1672455 cttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactctgttcttgtctacgctacaaaacaaga 1672368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 1674930 - 1674843
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| || |||||||| | ||||||||||||||||||||||||||||  ||||||||||||   ||||||| ||||| | ||||||    
T  1674930 cttcaaagaacgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactctgttcttgtctacgctacaaaacaaga 1674843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 8105696 - 8105641
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  8105696 gagcgttgacaaagtacgtttgtacgaaatgtacaaccactacctccactactctg 8105641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 45833479 - 45833373
Alignment:
Q  103 aatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctacta 202  Q
    ||||||||||||  | ||||||  | ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  || |||| |||||| |    
T  45833479 aatgcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgttttggtctctgctacaa 45833380  T
Q  203 cacaaga 209  Q
     ||||||    
T  45833379 aacaaga 45833373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 3395649 - 3395596
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  3395649 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 3395596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 12601160 - 12601107
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  12601160 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 12601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 13576157 - 13576246
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||||||||||   ||||||||||||| ||||||||  |||||| |||||  ||||||| |||||| | ||||||    
T  13576157 ttcttcaaagagcgttgacatagtacaactgtacgaagtgtaaaaccactacatccactgctctgtttttgtctctgctacaagacaaga 13576246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 16853567 - 16853482
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| ||||| | |||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  16853567 tcaaagagcgttgacaaagtacatctgtatgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 16853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 37985664 - 37985717
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  37985664 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 37985717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 55380349 - 55380296
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  55380349 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 55380296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 6641743 - 6641688
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||    
T  6641743 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctg 6641688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 19621113 - 19621163
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    |||||||||||||||||  |||||||||||||||||||||||  |||||||    
T  19621113 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccacta 19621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 22675563 - 22675625
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||| ||||||||||| |||||  |||||| ||||||||||||||||  ||||||||||    
T  22675563 ttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactc 22675625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 9140971 - 9140930
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  9140971 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 9140930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 40846158 - 40846105
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  40846158 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 40846105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 10073000 - 10072924
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    ||||| ||||||||||| |||||   ||||||||||||||||||||||  ||||||||| ||  ||||||| |||||    
T  10073000 ttcaaagagcgttgacaaagtacaaatgtacgaagtgtacaaccactatctccactactatgtttttgtctctgcta 10072924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 8685514 - 8685551
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctga 185  Q
    |||||||||||||||||||||||  |||||||||||||    
T  8685514 ttgtacgaagtgtacaaccactatctccactactctga 8685551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 16632499 - 16632458
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  16632499 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 16632458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 19666427 - 19666378
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  19666427 gttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 19666378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 19911933 - 19911986
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||||||||   |||||| ||||||||||||||||  ||||||||||    
T  19911933 gagcgttgacatagtataattgtacaaagtgtacaaccactacctccactactc 19911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 12811228 - 12811280
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||| ||||   |||||||||||||||||||||||  ||||||||||    
T  12811228 agcgttgacaaagtaaaattgtacgaagtgtacaaccactatctccactactc 12811280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 17247312 - 17247248
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| || | |||||| |||||  ||||||||||||||||||||||   ||||||||||||    
T  17247312 ttcttcaaagaacattgacaaagtacaattgtacgaagtgtacaaccactgcctccactactctg 17247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 3e-59; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 35931974 - 35932153
Alignment:
Q  21 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||||| |||||||||  |  |    
T  35931974 aagttttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacgactattttgaaacgcattggatgcttat 35932073  T
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  35932074 tcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctac 35932153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 35986204 - 35986379
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||  ||| |||||||| ||| |||||||||||||||||     |||||    
T  35986204 tttcaaaagatgtttcaaggactctaactcgccta-aaattgcagaagactggaaaagtgtggcaacgactattttgaaatgcattggatgcctattctt 35986302  T
Q  125 caatgagcgttgacatagtacgtttgtacgaa-gtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| ||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||| ||||||    
T  35986303 caaagagcgttgacatagtacgtctgtacaaaagtgtacaaccactacttccactactctgagtttgtctctgctac 35986379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 21660377 - 21660202
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||||||||||||| ||| | ||| |||||||| |||  |||||||||||  ||| ||| |||||||||||||  |   || |    
T  21660377 tttcaaaagctgtttcaaggactctaactcgtctaaagattgcagaagaccggaaaagtatggcaacaactattttcaaatgcattggatgcttagtcct 21660278  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  21660277 caaagatcgttgacatagtatgtttgtacgaagtgtacaaccactacttccactactctgagtttgtctctgctac 21660202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 10848937 - 10848754
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || |||||||||| ||||| ||||| ||||||  ||||||||| | |||| ||||||| ||||| |||  |  ||||||    
T  10848937 ttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcagaaaactggaaaagtatggcatcagctattttgaaaggcattagatgcttattcttc 10848838  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  10848837 aaagagcgttgacataatacgtttgtacaaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 10848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 9089091 - 9088950
Alignment:
Q  68 agaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaacca 167  Q
    |||||||||||  |||||  ||||| ||| |||| || |||||||||  || |||||||| |||||||||||||||||||||||||||||||||||||||    
T  9089091 agaagactggaaaagtattacaacgactattttggaaggcattggatgctaattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaacca 9088992  T
Q  168 ctaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||  ||||||||||||  ||||||| |||||| | ||||||    
T  9088991 ctatctccactactctgtttttgtctctgctacaagacaaga 9088950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 28464313 - 28464479
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||| || |||||| ||| | ||| |||||||||  |  |||||  ||||||||| ||||||| |||||||||  |  ||||||    
T  28464313 ttcaaaagctgtttcaaggattcaaactcgtcta-agattgcagaagactaaaaaagtataacaacggctattttgaaaggcattggatgcttattcttc 28464411  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    || ||||||||||||||||||||||||||||||||||||||||||  || |||||||||  |||||||    
T  28464412 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctctactactctgtttttgtct 28464479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 25930129 - 25930312
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggata-ttatttctt 124  Q
    |||||||||||||| ||||| || |||||| ||| | ||| || |||||||||  |||||  ||||||||| |||  || |||||||||  |||||| ||    
T  25930129 ttcaaaagttgtttaaaggattcaaactcgtctaaagattgcataagactggaaaagtataacaacggctaatttagaaggcattggatgcttattt-tt 25930227  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||  || |||||||||  ||||||| |||||| | ||||||    
T  25930228 caaagagcgttgacatagtacgtttgtacgaattgtacaaccactatctctactactctgtttttgtctctgctacaagacaaga 25930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 11993958 - 11993869
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||  ||||||| |||||| | ||||||    
T  11993958 ttcttcaaagagcgttgacaaagtacgtatgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctacaaaacaaga 11993869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 30115904 - 30115993
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  30115904 ttcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 30115993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 30743064 - 30742962
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||    
T  30743064 gcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagac 30742966  T
Q  206 aaga 209  Q
    ||||    
T  30742965 aaga 30742962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 3245508 - 3245581
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||  |||||||    
T  3245508 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtct 3245581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 4887092 - 4887003
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  4887092 ttcttcaaagagcgttgacaaagtacgtgtgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 4887003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 28139677 - 28139588
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||  |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  28139677 ttcttcatagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 28139588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 29138473 - 29138562
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||  | ||||| |||||| | ||||||    
T  29138473 ttcttcaaagagcgttgtcatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttgtgtctctgctacaagacaaga 29138562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 33933328 - 33933248
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  33933328 gagcgttgatatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 33933248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 14086615 - 14086695
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||  ||||||| |||||| | ||||||    
T  14086615 gagcgttgacaaagtacgtttgtacgaagtgtacaaccgctacctccactactctgtttttgtctctgctacaagacaaga 14086695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 33022748 - 33022645
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||    
T  33022748 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttttgtctctgctacaagac 33022649  T
Q  206 aaga 209  Q
    ||||    
T  33022648 aaga 33022645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 7745760 - 7745849
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  |||||||||| |  ||||||| |||||| | ||||||    
T  7745760 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcggtttttgtctctgctacaagacaaga 7745849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 15517039 - 15516951
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| |||| |||||||| ||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  15517039 ttcttcaaagagtgttggcatagtacttttgtacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 15516951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 26759219 - 26759131
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||| ||| |||||| |||||||||||||||||||||||||  ||||||||||| | ||||||| |||||| | ||||||    
T  26759219 ttcttcaaagagcgctgaaatagtaagtttgtacgaagtgtacaaccactacctccactactct-attttgtctctgctacaagacaaga 26759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 26765568 - 26765504
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||   ||||||||||||    
T  26765568 ttcttcaaagagcgctgaaatagtacgtttgtacgaagtgtacaaccactgcctccactactctg 26765504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 42243741 - 42243662
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| | ||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  42243741 gagcgttgacaaaatacgtttgtacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 42243662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 23391637 - 23391734
Alignment:
Q  88 caacggctagtttgaaat-gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||| |||||||  |||||||||  |  ||| |||| ||||||||||||||| |||||||||||||||||||| |||||  | ||||||||||    
T  23391637 caacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactatctgcactactctg 23391734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 23413050 - 23413103
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  23413050 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 23413103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 26784415 - 26784362
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  26784415 gagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactc 26784362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 31117947 - 31117858
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||| |||||   ||||||||||||||| |||||| |||||||||||||  ||||||| |||||| | ||||||    
T  31117947 ttcttcaaagagtgttgacaaagtacaaatgtacgaagtgtacatccactacttccactactctgtttttgtctctgctacaagacaaga 31117858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 19536377 - 19536429
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||||||||||||  |||||||||||||||||||||||  |||||||||    
T  19536377 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 19536429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 11208055 - 11208141
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| ||||||||||| ||||| | ||||||||||||| ||||||||  ||||||||||||  |||||||| ||||| | ||||||    
T  11208055 cttcaaagagcgttgacaaagtac-tatgtacgaagtgtataaccactacctccactactctgtttttgtctacgctacaagacaaga 11208141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 642783 - 642837
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    ||||||||||| |||||  |||||||||||||||||||||||  |||||||||||    
T  642783 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 642837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 13545579 - 13545669
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaagat 210  Q
    |||||||| ||||||||||| |||||   |||||||||||||||||||| |  |||||||||||   ||||||| |||||| | |||||||    
T  13545579 ttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccaccacctccactactctatttttgtctctgctacaagacaagat 13545669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 32160834 - 32160772
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||| ||||||||||| || |||| |||||||||||||| |||||||  ||||||||||||    
T  32160834 cttcaaagagcgttgacaaagaacgtatgtacgaagtgtacgaccactacctccactactctg 32160772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 89498 - 89551
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||| ||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  89498 gagcattgacatagtacaattgtacgaagtgtacaaccactatctccactactc 89551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 6499300 - 6499247
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  6499300 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 6499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 12352871 - 12352924
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  12352871 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12352924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 20550937 - 20550876
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  20550937 ttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 20550876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 21072316 - 21072357
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  21072316 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 21072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 21910617 - 21910564
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  21910617 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 21910564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 41566510 - 41566563
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||| |||||||  |||||||||||||||||||||||  ||||||||||    
T  41566510 gagcgttgatatagtacaattgtacgaagtgtacaaccactatctccactactc 41566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 23478409 - 23478350
Alignment:
Q  150 gtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| |||||||||||||||| |||||||||||||  |||||||| ||||| | ||||||    
T  23478409 gtacaaagtgtacaaccactacttccactactctgtttttgtctacgctacaagacaaga 23478350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 6512504 - 6512545
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  6512504 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 6512545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 9398810 - 9398863
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  9398810 gagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactc 9398863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 17815029 - 17814976
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||||| |||||||||||||||  ||||||||||    
T  17815029 gagcgttgacaaagtacaattgtacggagtgtacaaccactatctccactactc 17814976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 21199080 - 21199132
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||| |||||  ||||||||||||||||| |||||  ||||||||||    
T  21199080 agcgttgacaaagtacaattgtacgaagtgtacaatcactacctccactactc 21199132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 23881128 - 23881076
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||||||| ||| |  |||||||||||||||||||||||  |||||||||    
T  23881128 gagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctccactact 23881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 25096921 - 25096957
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  25096921 ttgtacgaagtgtacaaccactacctccactactctg 25096957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 25154891 - 25154927
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  25154891 ttgtacgaagtgtacaaccactacctccactactctg 25154927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 1e-58; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 19065999 - 19066173
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||  |  ||||||    
T  19065999 ttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcttc 19066098  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  19066099 aaagagcgttgacatagtatgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctac 19066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 26589787 - 26589584
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||    
T  26589787 gagatggaactcaagttttcaaaagttgtttcaatgactctaactcgcctagaaattacagaagactagaagagtgtggcaacagctagtttgaaatgca 26589688  T
Q  109 ttggatattatt--tcttcaatgagcgttgacatagtacgtttgtacg-aagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||  || |  | ||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||  | ||||| |||||| | ||    
T  26589687 ttggatgctaatgattttcaaagagcgttgacatagtacgtctgtacgaaagtgtacaaccactacttccactactctgtttctgtctctgctacaagac 26589588  T
Q  206 aaga 209  Q
    ||||    
T  26589587 aaga 26589584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 22076482 - 22076571
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22076482 ttcttcaaagagcgttgacatagtacatttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 22076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 21618318 - 21618254
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  21618318 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctg 21618254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 33351989 - 33352090
Alignment:
Q  107 cattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacaca 206  Q
    |||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||  ||||||| |||||| | |||    
T  33351989 cattggatgtttattcttcaa-gagcgttgacatagtacgtttgtacgaagtgtacaatcactatctccactactctgtttttgtctctgctacaagaca 33352087  T
Q  207 aga 209  Q
    |||    
T  33352088 aga 33352090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 12349088 - 12349003
Alignment:
Q  99 ttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||| |||||||||  |  |||||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  12349088 ttgaaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacaaagtgtacaaccactatctccactactctg 12349003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 12423335 - 12423262
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  |||||||    
T  12423335 ttcttcaaagagcgttgacatagtacctttgtacgaagtgtacaaccactatctccactactctgtttttgtct 12423262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 16336201 - 16336112
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||  | ||||||||||  ||||||| |||||| | ||||||    
T  16336201 ttcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctacactactctgtttttgtctctgctacaagacaaga 16336112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 29918091 - 29918002
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  29918091 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgctacaagacaaga 29918002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 17316507 - 17316689
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || | |||||| | ||||| ||||||||| |   ||| |  || |||||| ||||||| |||| ||||  |  ||| ||    
T  17316507 ttcaaaagttgtttcaaggattcaagctcgccaaaaaattgcagaagacttggaaagt-taacagcggctattttgaaaagcatcggatgcttattcctc 17316605  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||| ||||||||||||||||||||||||||  | ||||||| ||  ||||||| |||||| | ||||||    
T  17316606 aaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactatgtttttgtctctgctacaagacaaga 17316689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 15954774 - 15954704
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  15954774 ttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtct 15954704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 16877283 - 16877198
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  |||| || |||||| | ||||||    
T  16877283 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgcctctgctacaagacaaga 16877198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 17381595 - 17381506
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| |||||  ||||||| ||||  ||||||| |||||| | ||||||    
T  17381595 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaatcactacctccactattctgtttttgtctctgctacaagacaaga 17381506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 20487993 - 20488082
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||  ||||| | |||||| | ||||||    
T  20487993 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtttacaaccactacctccactactctgtttttgtatctgctacaagacaaga 20488082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 19482848 - 19482753
Alignment:
Q  98 tttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||| |||||||||  |  ||| |||| ||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||  |||||||    
T  19482848 tttgaaaagcattggatgcttattcctcaaggagcgttgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgtttttgtct 19482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 19833117 - 19833172
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  19833117 gagcgttgacatagtacgtttgtacgaagtgtacaagcactacctccactactctg 19833172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 32544353 - 32544250
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  | ||||| |||||| | ||    
T  32544353 gcattggatgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttctgtctctgctacaagac 32544254  T
Q  206 aaga 209  Q
    ||||    
T  32544253 aaga 32544250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 9717917 - 9717844
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||    
T  9717917 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtct 9717844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 15531699 - 15531788
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||| ||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  15531699 ttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccactacctccactactctgtctttgtctctgctacaagacaaga 15531788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 21235199 - 21235109
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctga-gtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  ||||| |||||||||||||||||  |||||||||||||  ||||||| |||||| | ||||||    
T  21235199 ttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactctgatatttgtctctgctacaagacaaga 21235109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 19086223 - 19086170
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  19086223 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 19086170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22802215 - 22802126
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||| ||| |||||  |||||||||||||||||||||||  |||||||||||   ||||||| |||||| | ||||||    
T  22802215 ttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttttgtctctgctacaagacaaga 22802126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 24116893 - 24116840
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  24116893 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 24116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 11206130 - 11206075
Alignment:
Q  155 aagtgtacaaccactaattccactactctgagtttgtctatgctactacacaagat 210  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||| |||||||||    
T  11206130 aagtgtacaaccactacctccactactctgcttttgtctatgctacaacacaagat 11206075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 13435596 - 13435517
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||| |||||  |||||||||||||||||||||||  |||||||||||   ||||||| |||||| | ||||||    
T  13435596 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctatatttgtctctgctacaagacaaga 13435517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 20730765 - 20730852
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||| ||||||||||||||||  |||||| |||||  |||||||    
T  20730765 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactgctctgtttttgtct 20730852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 26943622 - 26943571
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||| |||||    
T  26943622 ttgtacgaagtgtacaaccactacttccactactctgtttttgtctttgcta 26943571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 16265208 - 16265314
Alignment:
Q  103 aatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctacta 202  Q
    ||||||||||||  |  |||||||| ||||||||| | |||||  ||||||||||||| |||||||||  ||||||||||||  | ||||| |||||| |    
T  16265208 aatgcattggatgcttgttcttcaaagagcgttgagaaagtacaattgtacgaagtgtgcaaccactacctccactactctgtttgtgtctctgctacaa 16265307  T
Q  203 cacaaga 209  Q
     ||||||    
T  16265308 gacaaga 16265314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 14100515 - 14100603
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||| || ||||||||||| |||||  || ||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  14100515 ttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 14100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 21625175 - 21625114
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||| ||||||| ||| |||||  |||||||||||||||||||||||  |||||||||    
T  21625175 ttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctccactact 21625114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 19688854 - 19688790
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||| ||||||||    
T  19688854 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtataaccacta 19688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 26972289 - 26972390
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||  ||||||||||||||||||  |||||||||| |  ||||||| |||||| | ||    
T  26972289 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattg--cgaagtgtacaaccactacctccactactcagtatttgtctctgctacaagac 26972386  T
Q  206 aaga 209  Q
    ||||    
T  26972387 aaga 26972390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 12715504 - 12715557
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  12715504 gagcgttgacaaagtacaattgtacgaagtgtagaaccactatctccactactc 12715557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 15302265 - 15302212
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||| ||||  |||||| ||||||||||||||||  ||||||||||    
T  15302265 gagcgttgacattgtacaattgtacaaagtgtacaaccactatctccactactc 15302212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 15987298 - 15987257
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  15987298 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 15987257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 18378379 - 18378326
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||| | |||||  |||||||||||||||||||||||  ||||||||||    
T  18378379 gagcgttgataaagtacaattgtacgaagtgtacaaccactatctccactactc 18378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 18435630 - 18435541
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||   ||||| ||||||||||||||||  |||| ||| |||  ||||||| |||||| | ||||||    
T  18435630 ttcttcaaagagcgttgacaaagtacaagtgtacaaagtgtacaaccactacctccagtacactgtttttgtctctgctacaagacaaga 18435541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 20112784 - 20112837
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||||||| |||||||||||||  ||||||||||    
T  20112784 gagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactc 20112837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 1e-58; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 21636662 - 21636836
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| |||||||||||||||||  |  ||||||    
T  21636662 ttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacgactattttgaaatgcattggatgcttattcttc 21636761  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  21636762 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacttccactactctgtttttgtctctgctac 21636836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 21605646 - 21605829
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||| ||| |||||||||||||||||  |  ||||||    
T  21605646 ttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatgacaacgactattttgaaatgcattggatgcttattcttc 21605745  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  21605746 aaagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 21605829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 40851135 - 40850991
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| |||||||||||||||||  |  ||||||    
T  40851135 ttcaaaagctggttcaaggactctaactcgcctagaaattgcagaagactggaaaagtatggcaacgactattttgaaatgcattggatgcttattcttc 40851036  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    || |||||||||||||||| |||||||||||||||||||||||||    
T  40851035 aaagagcgttgacatagtatgtttgtacgaagtgtacaaccacta 40850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 46796360 - 46796542
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||| ||||| || |||||| ||| | ||| ||||||||||||  |||||  ||||||||| ||||||| ||||| |||| |  ||||||    
T  46796360 ttcaaaagttgtttaaaggattcaaactcgtcta-agattgcagaagactggaaaagtattacaacggctaatttgaaaggcattagatacttattcttc 46796458  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  46796459 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactttgtttttgtctctgctacaagacaaga 46796542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 30054209 - 30054383
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||| | || |||||||||| ||||| ||||||||| ||  ||||| |||||| ||| ||||||| ||||||| |  |  |||  |    
T  30054209 ttcaaaagctgtttcaagaattcaaactcgccta-aaattgcagaagacttgaaaagtatagcaacgactactttgaaaggcattgggtgcttattcaac 30054307  T
Q  126 aat-gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||| ||||||    
T  30054308 aaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactaactccactactctgtttttgtctctgctac 30054383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 2785128 - 2785049
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| |||||| | ||||||    
T  2785128 gagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctga-tttgtctctgctacaagacaaga 2785049  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 49666398 - 49666580
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattat-ttctt 124  Q
    |||||||||||||||||||| || |||||| ||| | ||| ||||||||||||  |||||  ||||| ||| ||||||| | |||| |    || |||||    
T  49666398 ttcaaaagttgtttcaaggattcaaactcgtcta-agattgcagaagactggaaaagtataacaacgactattttgaaagg-attgaaagacatattctt 49666495  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||| |||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||| | ||||| |||||| | ||||||    
T  49666496 caaagagcattgacatattacgtttgtacgaagtgtacaaccactatctccactactctgattctgtctctgctacaagacaaga 49666580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22140837 - 22140748
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22140837 ttcttcaaagagcgttgacatagtacgtatgtacgaagtgtataaccactacctccactactctgtttttgtctctgctacaagacaaga 22140748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 53056813 - 53056902
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  53056813 ttcttcaaagagcgtttacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 53056902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 14955500 - 14955436
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  14955500 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctg 14955436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 24775620 - 24775700
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  24775620 ttcttcaaagagctttgacaaagtacgtttgtacgaagtgtacaaccactacatccactactctgtttttgtctctgctac 24775700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 5213640 - 5213562
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  5213640 agcgttgacgtagtacgtttgtacgaagtgtacaaccactacctccactactctg-ttttgtctatgctacaagacaaga 5213562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 9700029 - 9700211
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || | ||||||   ||||| ||||||||| |   ||| |  ||||| ||| ||||||| |||||||||  |  ||| ||    
T  9700029 ttcaaaagttgtttcaaggattcaagctcgccagaaaattgcagaagacttggaaagt-taacaacgactattttgaaaagcattggatgcttattcctc 9700127  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||| ||||||||||||||||| ||||||||  | ||||||||||  ||||||| |||||| | ||||||    
T  9700128 aaggagcgttgacatagtgcgtttgtacgaagtgtataaccactatctgcactactctgtttttgtctctgctacaagacaaga 9700211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 18121707 - 18121797
Alignment:
Q  119 tttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||| ||||||| ||| |||||  |||||||||||||||||||||||  |||||||||||| |||||||| |||||| | ||||||    
T  18121707 tttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctctgctacaagacaaga 18121797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 18142837 - 18142927
Alignment:
Q  119 tttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||| ||||||| ||| |||||  |||||||||||||||||||||||  |||||||||||| |||||||| |||||| | ||||||    
T  18142837 tttcttcaaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtgtttgtctctgctacaagacaaga 18142927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 21641041 - 21640877
Alignment:
Q  27 tcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttg---------aaatgcattggata-t 116  Q
    ||||||| ||||||||||| || |||||||||| | |||  |||||||||||  ||||| |||||||||| ||||         ||| |||||||||  |    
T  21641041 tcaaaagctgtttcaaggattcaaactcgccta-agattgtagaagactggaaaagtatagcaacggctattttggaaggattgaaaagcattggatgct 21640943  T
Q  117 tatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  21640942 tattt-ttcaaagagcgttgacatagtacgtttttacgaagtgtacaaccactatctccactactct 21640877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 1728069 - 1728190
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    ||||||||| ||||||| |||||||||  |  ||| |||| || | |||||||||| ||||||||||||||||||||||||||  | ||||||||||  |    
T  1728069 caacggctattttgaaaagcattggatgcttattcctcaaggaacattgacatagtgcgtttgtacgaagtgtacaaccactatctgcactactctgttt 1728168  T
Q  188 ttgtctatgctactacacaaga 209  Q
    |||||| |||||| | ||||||    
T  1728169 ttgtctctgctacaagacaaga 1728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 11223636 - 11223548
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  11223636 ttcttcaaagagcgttgacaaagtatgtttgtacgaagtgtacaaccactatctccactactctg-ttttgtctctgctacaagacaaga 11223548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 11868338 - 11868253
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  11868338 tcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaaaacaaga 11868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 29855482 - 29855393
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||| ||| |||||| | ||||||    
T  29855482 ttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttatctctgctacaagacaaga 29855393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 47207779 - 47207690
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  47207779 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctttgctacaagacaaga 47207690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 40799947 - 40799867
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  40799947 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctac 40799867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 20627521 - 20627578
Alignment:
Q  124 tcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  20627521 tcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactact 20627578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 33583293 - 33583214
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||| |||||| | ||||||| |||||| | ||||||    
T  33583293 gagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccaatactct-attttgtctctgctacaagacaaga 33583214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 25398342 - 25398421
Alignment:
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||||||||||| || ||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  25398342 tcttcaaagagcgttgacaaagcacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctac 25398421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 49553561 - 49553655
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||||| ||  |||||||  ||||||||||| |||||  |||||||||||||||||||||||  |||||||||||   ||||||| ||||||    
T  49553561 gcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttttgtctctgctac 49553655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 2561261 - 2561172
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| || |||||||| |||||   ||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  2561261 ttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 2561172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 20646218 - 20646165
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  20646218 gagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactc 20646165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 47405507 - 47405596
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||| |||||  |||||||||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  47405507 ttcttcaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttttgtctctgctacaagacaaga 47405596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 50300287 - 50300246
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  50300287 gagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 50300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 13824156 - 13824092
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||| ||  |||||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  13824156 gcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 16032589 - 16032518
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||| |||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  16032589 gagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctac 16032518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 38177729 - 38177792
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    ||||| || ||||||||||| |||||  |||||||||||||||||||||||  |||||||||||    
T  38177729 ttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactct 38177792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 28582179 - 28582117
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||| ||||||||||| | |||  |||||||||||||||||||||||  ||||||||||    
T  28582179 ttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactc 28582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 12963184 - 12963233
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  12963184 gttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 12963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 41495063 - 41495010
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  41495063 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 41495010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 6090791 - 6090727
Alignment:
Q  134 ttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgct 198  Q
    |||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||    
T  6090791 ttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgct 6090727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 14393099 - 14393151
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  14393099 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 14393151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 16658713 - 16658765
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||||||||| |||  |||||||||||||||||||||||  |||||||||    
T  16658713 gagcgttgacataatacaattgtacgaagtgtacaaccactacctccactact 16658765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 11909112 - 11909171
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||| ||||||||||| ||||||| | |||||||||||| |||||||  |||||||||    
T  11909112 cttcaaagagcgttgacaaagtacgtctttacgaagtgtacgaccactacctccactact 11909171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 14969400 - 14969341
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    ||||||||  |||||||||| ||||| ||| ||||||||||||||||||||  |||||||    
T  14969400 ttcttcaaatagcgttgacaaagtacatttttacgaagtgtacaaccactatctccacta 14969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 17239018 - 17239069
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  17239018 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 17239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 37412665 - 37412614
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||| || |||||||||||| |||||||||||||  ||||||||||||    
T  37412665 gttgacattgtgcgtttgtacgaaatgtacaaccactatctccactactctg 37412614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 37467397 - 37467346
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactac 180  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||    
T  37467397 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactac 37467346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 13948400 - 13948362
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaacca 167  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  13948400 gagcgttgacatagtacaattgtacgaagtgtacaacca 13948362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 12388986 - 12389031
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||    
T  12388986 ttgtacgaagtgtacaaccactacctccactactctgtttttgtct 12389031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 12726344 - 12726405
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| ||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  12726344 ttgtacaaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 12726405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 13780679 - 13780720
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  13780679 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 13780720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 22804118 - 22804171
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  22804118 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 22804171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 31303450 - 31303397
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||| ||||  ||||||||||    
T  31303450 gagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactc 31303397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 49642857 - 49642910
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||| ||||||||||||||||  ||||||||||    
T  49642857 gagcgttgacaaagtacaattgtacaaagtgtacaaccactatctccactactc 49642910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 23392605 - 23392780
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||  | | |  |    
T  23392605 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaaaagtatggcaacggctattttgaaatgcattggatgctttcttct 23392704  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| |||||||||| ||||||   |||||||||||||||||||||| ||||| |||||| ||||||||| ||||||    
T  23392705 caaagagcgttgacctagtacaactgtacgaagtgtacaaccactacttccattactctaagtttgtctctgctac 23392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 31967983 - 31968164
Alignment:
Q  27 tcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttca 126  Q
    ||||||||||||||||||| || ||||||| || ||||| ||||||||||||  ||||| |||||  ||| |||||||||||||||||  |  |||||||    
T  31967983 tcaaaagttgtttcaaggattcaaactcgcata-aaattgcagaagactggaaaagtatagcaacaactattttgaaatgcattggatgcttattcttca 31968081  T
Q  127 atgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    | ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  31968082 aagagcgttgacataatacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 31968164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 40332237 - 40332075
Alignment:
Q  37 tttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgttg 136  Q
    |||| |||| || |||||||||| ||||| ||||||||||||  ||||| |||||||||| ||||||| |||||||||  |  |||||||| ||||||||    
T  40332237 tttctaggattcaaactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaggcattggatgcttattcttcaaagagcgttg 40332139  T
Q  137 acatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||  ||||||| ||||||    
T  40332138 acatagtacgtttgtacgaagtgtacaaccactaactccattactctgtttttgtctctgctac 40332075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 35 - 209
Target Start/End: Complemental strand, 14581667 - 14581494
Alignment:
Q  35 tgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgt 134  Q
    ||||||||||| |  |||||||||| ||||| ||||||||||||  | |||||||||| ||| ||||||| |||||||||  |  |||||||| ||||||    
T  14581667 tgtttcaaggattaaaactcgccta-aaattgcagaagactggaaaaatatggcaacgactattttgaaaggcattggatgcttattcttcaaagagcgt 14581569  T
Q  135 tgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||| |||||| | ||||||    
T  14581568 tgacatagtacgtttgtacgaagtgtacaaccactatctccacttctctgattttgtctctgctacaagacaaga 14581494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 28550858 - 28551039
Alignment:
Q  27 tcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttca 126  Q
    ||||||| ||||||||||| || |||||||||| ||||| ||||||||||||  ||||| | |||  ||| ||||||| |||||||||  |  |||||||    
T  28550858 tcaaaagctgtttcaaggattcaaactcgccta-aaattgcagaagactggaaaagtatagaaacaactattttgaaaggcattggatgcttattcttca 28550956  T
Q  127 atgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  28550957 aagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 28551039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 22776227 - 22776400
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||  ||  ||||||||| ||||| || |||||| ||  ||||| |||||||||| ||||||| |||||||||  |  ||||||    
T  22776227 ttcaaaagttgtttcaaggtttcagactcgccta-aaattgcaaaagacttgaaaagtatagcaacggctattttgaaaggcattggatgcttattcttc 22776325  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||  ||||||| ||||||    
T  22776326 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgctac 22776400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 200
Target Start/End: Original strand, 22781605 - 22781778
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||  ||  ||||||||| ||||| || |||||| ||  ||||| |||||||||| ||||||| |||||||||  |  ||||||    
T  22781605 ttcaaaagttgtttcaaggtttcagactcgccta-aaattgcaaaagacttgaaaagtatagcaacggctattttgaaaggcattggatgcttattcttc 22781703  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||  |||| |||||||  ||||||| ||||||    
T  22781704 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgctac 22781778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 44840594 - 44840423
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||| || |||||||||| | ||| |||| ||||| |  |||||||||||| ||| ||||||| |||||||||  |  ||||||    
T  44840594 ttcaaaagctgtttcaaggattcaaactcgccta-acattgcaga-gactgaaaaagtatggcaacgactattttgaaaggcattggatgcttattcttc 44840497  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||    
T  44840496 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgcta 44840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 1586971 - 1587153
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||| ||||| || |||||  ||  | ||| |||||||||| |  |||||  ||||||||| ||||||| |||||||||  || ||||||    
T  1586971 ttcaaaagttgtttaaaggattcaaactcatctgaagattgcagaagactgaaaaagtattacaacggctattttgaaaggcattggatgctaattcttc 1587070  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  1587071 aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctg-ttttgtctctgctacaagacaaga 1587153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 3277192 - 3277037
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||| ||| | || |||| | ||  | ||| |||||||||| |  |||||  ||||||||| |||| || |||||||||  |  ||||||    
T  3277192 ttcaaaagttgtttaaagaattcaaacttgtctgaagattgcagaagactgaaaaagtataacaacggctaatttggaaggcattggatgcttattcttc 3277093  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    || ||||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  3277092 aaagagcgttgatatagtacgtttgtacgaagtgtacaaccactatctccactact 3277037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 22785618 - 22785751
Alignment:
Q  50 aactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgttt 149  Q
    |||||||||| ||||| ||||| ||||||   |||| |||||| ||| ||||||| |||||||||  |  |||||||| ||||||||||||||||| |||    
T  22785618 aactcgccta-aaattgcagaaaactggaaatgtatagcaacgactattttgaaaggcattggatgcttattcttcaaagagcgttgacatagtactttt 22785716  T
Q  150 gtacgaagtgtacaaccactaattccactactctg 184  Q
    |||| ||||||| ||||||||  ||||||||||||    
T  22785717 gtacaaagtgtataaccactatctccactactctg 22785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 31800920 - 31801008
Alignment:
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  31800920 tcttcaaagagcgttgacaaagtacatttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 31801008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 28711730 - 28711809
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||    
T  28711730 ttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtctctgcta 28711809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22802528 - 22802440
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22802528 ttcttcaaagagagttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 22802440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 30557362 - 30557441
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| | ||||||| |||||| | ||||||    
T  30557362 gagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactct-attttgtctctgctacaagacaaga 30557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 34321947 - 34322031
Alignment:
Q  99 ttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    |||||| |||||||||  |  |||||||| |||||||||||||||||||||||| |||||||||||||||||  | |||||||||    
T  34321947 ttgaaaggcattggattcttattcttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatcttcactactct 34322031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 35744032 - 35744111
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||  |||||||||| |  ||||||| |||||    
T  35744032 ttcttcaaagagcgttgacatagtacgtttgtacgaaatgtacaactactatctccactactcagtttttgtctctgcta 35744111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 33074282 - 33074205
Alignment:
Q  132 cgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||| |||| |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  33074282 cgttgacataatacgattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 33074205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 38781467 - 38781404
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactct 183  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  |||||||||||    
T  38781467 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacatccactactct 38781404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 19540484 - 19540422
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||| || |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  19540484 ttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 19540422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 24377160 - 24377107
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||    
T  24377160 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 24377107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 31327998 - 31328086
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||| ||| | |||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  31327998 ttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 31328086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 31334719 - 31334807
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||| ||| | |||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  31334719 ttcttcaaagagcgttgacaaagtatgttcgaacgaagtgtacaaccactacctccactactctg-ttttgtctctgctacaagacaaga 31334807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 45087225 - 45087266
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  45087225 gagcgttgacaaagtacgtttgtacgaagtgtacaaccacta 45087266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 6392692 - 6392613
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||||||||||||||||  |||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  6392692 gagcgttgacaaagtacgtttgtacgaagtgcgcaaccactacctccactactctg-ttttgtctctgctacaagacaaga 6392613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 6574141 - 6574220
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgt-ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||| ||  |||||||| ||||||||||| |||||   |||||||||||||||||||||||  ||||||||||||    
T  6574141 gcattggatgtttgttcttcaaagagcgttgacaaagtacaaattgtacgaagtgtacaaccactacctccactactctg 6574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 20152067 - 20152117
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  20152067 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 13964019 - 13964072
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  13964019 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13964072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 18376947 - 18377000
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  18376947 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 18377000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 21537289 - 21537342
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  21537289 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 21537342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 25829193 - 25829140
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  25829193 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 25829140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 28701261 - 28701322
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||| | ||||||||| |||| |||||||||||||||||||||| ||  |||||||||    
T  28701261 ttcttcaaagggcgttgacaaagtaagtttgtacgaagtgtacaaccattacctccactact 28701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 30667048 - 30666995
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  30667048 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 30666995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 39037683 - 39037736
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  39037683 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc 39037736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 40782536 - 40782495
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  40782536 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 40782495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 22317661 - 22317602
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccacta 179  Q
    |||||||| ||||||||||| |||||  ||||||||||| |||||||||||  |||||||    
T  22317661 ttcttcaaagagcgttgacaaagtacaattgtacgaagtatacaaccactacctccacta 22317602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 10009794 - 10009844
Alignment:
Q  132 cgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||||||  ||||||||| |||||||||||||  ||||||||||    
T  10009794 cgttgacatagtacaattgtacgaaatgtacaaccactatctccactactc 10009844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 24275235 - 24275181
Alignment:
Q  155 aagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  24275235 aagtgtacaaccactacctccactactctgtttttgtctatgctacaagacaaga 24275181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 19115123 - 19115086
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctga 185  Q
    |||||||||||||||||||||||  |||||||||||||    
T  19115123 ttgtacgaagtgtacaaccactatctccactactctga 19115086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 20568791 - 20568832
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  20568791 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20568832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 23235062 - 23235013
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  23235062 gttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 23235013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 25189457 - 25189404
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  ||||||||| |||||||||||||  ||||||||||    
T  25189457 gagcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactc 25189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 30621275 - 30621222
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  30621275 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 30621222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 30623896 - 30623843
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  30623896 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactc 30623843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 44881207 - 44881170
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctga 185  Q
    |||||||||||||||||||||||  |||||||||||||    
T  44881207 ttgtacgaagtgtacaaccactatctccactactctga 44881170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 22455032 - 22455084
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||| |||||  |||||||||||||||||||| ||  ||||||||||    
T  22455032 agcgttgacaaagtacaattgtacgaagtgtacaaccagtacctccactactc 22455084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 24576090 - 24576042
Alignment:
Q  133 gttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  24576090 gttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 24576042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 24850707 - 24850787
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||   |||||||| |||||||||||||  |||||||||| | || ||||| |||||| | ||||||    
T  24850707 gagcgttgacaaagtacaagtgtacgaaatgtacaaccactacatccactactcagtgtgtgtctctgctacaagacaaga 24850787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 25037301 - 25037353
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||| |||||  |||| ||||||||||||||||||  ||||||||||    
T  25037301 agcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactc 25037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 25041408 - 25041460
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||| |||||  |||| ||||||||||||||||||  ||||||||||    
T  25041408 agcgttgacaaagtacaattgttcgaagtgtacaaccactatctccactactc 25041460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 26619161 - 26619197
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  26619161 ttgtacgaagtgtacaaccactatctccactactctg 26619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 34746 - 34930
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||  ||||||||||||  || |||||||||||||||||  |  |||||    
T  34746 tttcaaaagttgtttcaaggattcaaactcgcctagaaattgcagaagactggaaaagtatggcaacgaatattttgaaatgcattggatgcttattctt 34845  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  34846 caaagagcgttgacatagtacgtttgtatgaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 34930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 25607 - 25775
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||||||||||||||| || |||||||||||||||| || |||||||||  ||||||||||| | || |||||||||||||||||  |  |||||    
T  25607 tttcaaaagttgtttcaaggattcaaactcgcctagaaattgcaaaagactggaaaagtatggcaacagatattttgaaatgcattggatgcttattctt 25706  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  25707 caaaaagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttttgtct 25775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 87542 - 87701
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||||| |  |||||||||||| ||| |||||||||||||||||   | |||||    
T  87542 tttcaaaagctgtttcaaggactctaacttgcctagaaattgcagaagactgaaaaagtatggcaacgactattttgaaatgcattggatgcaaattctt 87641  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  87642 caaagagcgttgacatagtacgtctgtacgaagtgtacaaccactacttccactactctg 87701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 1699 - 1865
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||||||||||||||| || |||||||||| | ||| ||||||||||||  |||||||||||||||| |||||||||||||||||  |  ||||||    
T  1699 ttcaaaagttgtttcaaggattcaaactcgccta-acattgcagaagactggaaaagtatggcaacggctattttgaaatgcattggatgcttattcttc 1797  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    || ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  1798 aaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtct 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 692 - 765
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||  |||||||    
T  692 ttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttttgtct 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 763 - 922
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||| ||  ||||||||||| |||| ||||||||| |||||||  |  |||||    
T  763 tttcaaaagctgtttcaaggactctaactcgtctataaattgcagaagactagaaaagtatggcaacagctattttgaaatgtattggatgcttattctt 862  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  863 caaagagcgttgacataatacgtttgtacgaagtgtacaaccactacttccactactctg 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 11555 - 11450
Alignment:
Q  9 gagatggacatcaagttttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgca 108  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  11555 gagatggaactcaagttttcaaaatttgtttcaaggactctaactcgcctagaaattacagaagactggaagagtgtggcaacggctagtttgaaatgca 11456  T
Q  109 ttggat 114  Q
    ||||||    
T  11455 ttggat 11450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 5266 - 5442
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||| ||||||||||||||||||| | ||| ||||||||||||   || ||||||| |||| |||||||||||||||||     |||||    
T  5266 tttcaaaagctgttttaaggactctaactcgcctaaagattgcagaagactggaaatgtgtggcaacagctattttgaaatgcattggatgcctattctt 5365  T
Q  125 caatgagcgttgacatagtacgtttgta-cgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||| ||||||||||||||||||| ||||   |||||||||||||||| |||||||||||||||||||||| ||||||    
T  5366 caaagagcgttgacatagtacgtatgtagaaaagtgtacaaccactacttccactactctgagtttgtctctgctac 5442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 2645 - 2808
Alignment:
Q  25 tttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttctt 124  Q
    ||||||||| ||||||||||| || |||||||||| ||||| ||||||||||||  ||||| |||||||||| ||||||| |||||||||       |||    
T  2645 tttcaaaagctgtttcaaggattcaaactcgccta-aaattgcagaagactggaaaagtatagcaacggctattttgaaaagcattggatg------ctt 2737  T
Q  125 caatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
         ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  2738 -----agcgttgacatagtacgtttgtatgaagtgtacaaccactaactccactactctgtttttgtctctgctac 2808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 17709 - 17891
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggctagtttgaaatgcattggatattatttcttc 125  Q
    |||||||| ||||||||||| || |||||| ||| | ||| |||||||||  |  ||||| |||||| ||| ||||||| |||||||||  |  | ||||    
T  17709 ttcaaaagctgtttcaaggattcaaactcgtcta-agattgcagaagactacaaaagtatagcaacgtctattttgaaaggcattggatgcttatccttc 17807  T
Q  126 aatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    || |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  17808 aaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 17891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 9229 - 9140
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||  |||||||||||||| | ||||||    
T  9229 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactgtgtttttgtctatgctacaagacaaga 9140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 25422 - 25525
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    |||||||||| |  |||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||    
T  25422 gcattggatagttattcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagac 25521  T
Q  206 aaga 209  Q
    ||||    
T  25522 aaga 25525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 2767 - 2856
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  2767 ttcttcaaagagtgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 2856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 22168 - 22257
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||  ||||||| |||||| | ||||||    
T  22168 ttcttcaatgagcgttgacataatacgtttgtacgaagtgtacaaccactatctccagtactctgtttttgtctctgctacaagacaaga 22257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 9624 - 9561
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||||||||||||  ||||||||||||||||||||||  ||||||||||||  |||||||    
T  9624 agcgttgacatagtacgactgtacgaagtgtacaaccactatctccactactctgtttttgtct 9561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 19105 - 19025
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    |||||||| ||||||||  | |||||   ||||||||||||||||||||||  |||||||||| |  ||||||| ||||||    
T  19105 ttcttcaaagagcgttggaaaagtacaagtgtacgaagtgtacaaccactacctccactactcagtttttgtctctgctac 19025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 60877 - 60804
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtct 193  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||    
T  60877 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtct 60804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 60980 - 60910
Alignment:
Q  26 ttcaaaagttgtttcaaggactctaactcgcctagaaattacagaagactggaggagtatggcaacggcta 96  Q
    |||||||||||||| ||||| |  |||||| ||| ||||| ||||||||||||  ||||| ||||||||||    
T  60980 ttcaaaagttgtttaaaggatttaaactcgtctaaaaattgcagaagactggaaaagtatagcaacggcta 60910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 215534 - 215623
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||  || |||| |||||| | ||||||    
T  215534 ttcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgttttcgtctctgctacaagacaaga 215623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 127862 - 127808
Alignment:
Q  155 aagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||| |||||||||||||  |||||||| ||||| | ||||||    
T  127862 aagtgtacaaccactacttccactactctgtttttgtctacgctacaagacaaga 127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 8e-20; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 211472 - 211383
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||  ||||||| |||||| | ||||||    
T  211472 ttcttcaaagagcgttgacatagtacgtttgtacgaagtatacaactactacctccactactctgtttttgtctctgctacaagacaaga 211383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 220303 - 220250
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  ||||||||||    
T  220303 gagcgttgacaaagtacaattgtacgaagtgtataaccactacctccactactc 220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 244349 - 244385
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  244349 ttgtacgaagtgtacaaccactacctccactactctg 244385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 3392 - 3289
Alignment:
Q  106 gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacac 205  Q
    ||||||||| ||  |||||||| ||||||||| ||||||||||||||| ||||||||||||||||  |||||| |||||  ||||||| |||||| | ||    
T  3392 gcattggatgtttattcttcaaagagcgttgatatagtacgtttgtacaaagtgtacaaccactacctccactgctctgtttttgtctctgctacaagac 3293  T
Q  206 aaga 209  Q
    ||||    
T  3292 aaga 3289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 99252 - 99331
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  99252 agcgctgacatagtacgtttgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 99331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 19518 - 19559
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||||| |||  |||||||||||||||||||||||    
T  19518 gagcgttgacataatacaattgtacgaagtgtacaaccacta 19559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 6777 - 6866
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||  |||| ||||||   ||||||| |||||| ||||||||    
T  6777 ttcttcaaagagcattgacaaagtacgtttgtacgaagtgtacaaccactacctccagtactctatttttgtctctgctacaacacaaga 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 212419 - 212339
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  212419 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttttgtctatgctacaagacaaga 212339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 27467 - 27546
Alignment:
Q  121 tcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| ||||||    
T  27467 tcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccactacctccactactctgtttttgtctctgctac 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 7777 - 7690
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||  ||||||||| |||||| | ||||||    
T  7777 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactc--agtttgtctctgctacaagacaaga 7690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 1736 - 1825
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||||||  | |||| |||||  ||||||| |||||| | ||||||    
T  1736 ttcttcaaagagcgttgacaaagtacgtttttacgaagtgtacaaccactaccttcactgctctgtttttgtctctgctacaagacaaga 1825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 78403 - 78492
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||  | ||||||| ||  ||||||| |||||| | ||||||    
T  78403 ttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctacactactatgtttttgtctctgctacaagacaaga 78492  T

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Target: scaffold0414 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 7205 - 7257
Alignment:
Q  132 cgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  7205 cgttgacatggtacgtttgtacgaagtgtacaaccactatctccactactctg 7257  T

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Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 10826 - 10714
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    |||||| |||||||||| |||| ||||  | | || |||| ||||||||||||  |  || |||||||| ||||||||||||| ||||||| ||||||||    
T  10826 caacggatagtttgaaaagcataggatgctttatcctcaaagagcgttgacattatgagtatgtacgaactgtacaaccactacttccacttctctgagt 10727  T
Q  188 ttgtctatgctac 200  Q
    |||||| ||||||    
T  10726 ttgtctctgctac 10714  T

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Target: scaffold0207; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 20727 - 20616
Alignment:
Q  88 caacggctagtttgaaatgcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagt 187  Q
    ||||||||||||||||| |||||||||  | | || |||| |||| ||||||| ||  || |||| ||| ||||| ||||||| ||||| | ||||||||    
T  20727 caacggctagtttgaaaagcattggatgctttatcctcaaagagcattgacattgtgagtatgtaagaactgtactaccactacttccaattctctgagt 20628  T
Q  188 ttgtctatgcta 199  Q
    |||||| |||||    
T  20627 ttgtctctgcta 20616  T

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Target: scaffold0527 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 8006 - 7963
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtaca 163  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  8006 ttcttcaaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

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Target: scaffold0132 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 38124 - 38210
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| ||||||||||| |||||||  ||||||||||||| |||||||  ||||||||||||  |||||||||||||| | ||||||    
T  38124 cttcaaagagcgttgacaaagtacgtccgtacgaagtgtacgaccactacctccactactctg-ttttgtctatgctacaagacaaga 38210  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 164985 - 165072
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||| ||||||||||| ||||||| |||||||||||||| |||||||  ||||||||||||  | |||||| ||||| | ||||||    
T  164985 cttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactctgtttatgtctacgctacaagacaaga 165072  T

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Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 384 - 446
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||| ||||||||||| ||||||| |||||||||||||| |||||||  ||||||||||||    
T  384 cttcaaagagcgttgacaaagtacgtctgtacgaagtgtacgaccactacctccactactctg 446  T

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Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 32550 - 32497
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||||||||  ||||||||||    
T  32550 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 32497  T

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Target: scaffold0084; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 49397 - 49344
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||| ||||  ||||||||||    
T  49397 gagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactc 49344  T

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Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 21008 - 21097
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| |||||| |||  |||||  |||||||||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  21008 ttcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctccactactctgtttttgtctctgctacaagacaaga 21097  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 5639 - 5728
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| ||||| ||| || |||||||||||||||||  ||||||||| ||  ||||||| |||||| | ||||||    
T  5639 ttcttcaaagagcgttgacaaagtacatttatatgaagtgtacaaccactacctccactactatgtttttgtctctgctacaagacaaga 5728  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 831 - 734
Alignment:
Q  88 caacggctagtttgaaat-gcattggatattatttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||| |||||||  |||||||||  |  ||| |||| ||||||||||||||| |||||||||||||||||||| |||||  | ||||||||||    
T  831 caacggctattttgaaaaagcattggatgcttattcctcaaggagcgttgacatagttcgtttgtacgaagtgtacaatcactatctgcactactctg 734  T

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Target: scaffold0411 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 12274 - 12203
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctac 200  Q
    ||||||||||| |||||  |||||||||||||||||||||||  |||||||||| || | ||||| ||||||    
T  12274 gagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagattgtgtctctgctac 12203  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 7991 - 7940
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactac 180  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||    
T  7991 gagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactac 7940  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 60081 - 60040
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  60081 gagcgttgacatagtacaattgtacgaagtgtacaaccacta 60040  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 15662 - 15748
Alignment:
Q  123 ttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||| |||| |||||| ||||||| |||||||||||||| |||||||  ||||||||||||  | |||||| ||||| | ||||||    
T  15662 ttcaaagagcattgacaaagtacgtctgtacgaagtgtacgaccactatctccactactctgtttatgtctacgctacaagacaaga 15748  T

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Target: scaffold0426 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 13636 - 13583
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    |||||||||||||||||  |||||| ||||||||||||||||  ||||||||||    
T  13636 gagcgttgacatagtacaattgtacaaagtgtacaaccactatctccactactc 13583  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22750 - 22661
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||| ||||||| |||||  ||||| |||| ||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  22750 ttcttcaaagagtgttgacaaagtacaattgtatgaagcgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 22661  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 103646 - 103585
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||| ||||||||||| |||||  ||||||||||||| |||||||||  |||||||||    
T  103646 ttcttcaaagagcgttgacaaagtacaattgtacgaagtgtgcaaccactacctccactact 103585  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 90092 - 90181
Alignment:
Q  120 ttcttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||| ||||||||||| | |||   |||||||||||||||||| |||  ||||||||||||  ||||||| |||||| | ||||||    
T  90092 ttcttcaaagagcgttgacaaaatacaagtgtacgaagtgtacaacccctacctccactactctgtttttgtctctgctacaagacaaga 90181  T

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Target: scaffold0479 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 10034 - 9954
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    ||||||| ||| |||||  |||||| ||||||||||||||||  ||||||||||||  ||||||| |||||| | ||||||    
T  10034 gagcgttcacaaagtacaattgtacaaagtgtacaaccactacctccactactctgtttttgtctctgctacaagacaaga 9954  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 1755 - 1703
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  1755 gagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 1703  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 1836 - 1895
Alignment:
Q  122 cttcaatgagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||| ||||||||||| ||||||| | |||||||||||| |||||||  |||||||||    
T  1836 cttcaaagagcgttgacaaagtacgtctatacgaagtgtacgaccactacctccactact 1895  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 10154 - 10209
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||| |||||  ||||||||||||||| |||||||  ||||||||||||    
T  10154 gagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctg 10209  T

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Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 14818 - 14873
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctg 184  Q
    ||||||||||| |||||  ||||||||||||||| |||||||  ||||||||||||    
T  14818 gagcgttgacaaagtacaattgtacgaagtgtacgaccactacctccactactctg 14873  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 15181 - 15130
Alignment:
Q  130 agcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    |||||||||| |||||  |||||||||||||||||||||||  |||||||||    
T  15181 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 15130  T

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Target: scaffold0771 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 540 - 502
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaacca 167  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  540 gagcgttgacatagtacaattgtacgaagtgtacaacca 502  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 1725 - 1655
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgcta 199  Q
    ||||||||||| |||||  ||||| |||||||||||||||||  ||||||||| ||  ||||||| |||||    
T  1725 gagcgttgacaaagtacaattgtaggaagtgtacaaccactacctccactactttgtttttgtctctgcta 1655  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 2041 - 2082
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccacta 170  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  2041 gagcgttgacaaagtacaattgtacgaagtgtacaaccacta 2082  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 5736 - 5789
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||||||||||||||| ||||  ||||||||||    
T  5736 gagcgttgacaaagtacaattgtacgaagtgtacaactactatctccactactc 5789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 14713 - 14660
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  || ||||||||||||||||||||  ||||||||||    
T  14713 gagcgttgacaaagtacaattttacgaagtgtacaaccactacctccactactc 14660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 10021 - 9968
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  |||||| ||||||||||||||||  ||||||||||    
T  10021 gagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactc 9968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 18667 - 18720
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactactc 182  Q
    ||||||||||| |||||  || ||||||||||||||||||||  ||||||||||    
T  18667 gagcgttgacaaagtacaattttacgaagtgtacaaccactatctccactactc 18720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 36840 - 36901
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||||  || |||||||||  ||||||| |||||| | ||||||    
T  36840 ttgtacgaagtgtacaaccactacctctactactctgtttttgtctctgctacaagacaaga 36901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 42165 - 42104
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||||  || |||||||||  ||||||| |||||| | ||||||    
T  42165 ttgtacgaagtgtacaaccactacctctactactctgtttttgtctctgctacaagacaaga 42104  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 37448 - 37387
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||||  |||||||||||   ||||||| |||||| | ||||||    
T  37448 ttgtacgaagtgtacaaccactacctccactactctatttttgtctctgctacaagacaaga 37387  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 135508 - 135447
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctgagtttgtctatgctactacacaaga 209  Q
    |||||||||||||||||||||||  |||||||||||   ||||||| |||||| | ||||||    
T  135508 ttgtacgaagtgtacaaccactacctccactactctatttttgtctctgctacaagacaaga 135447  T

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Target: scaffold1747 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 1363 - 1327
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  1363 ttgtacgaagtgtacaaccactatctccactactctg 1327  T

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Target: scaffold1745 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 48 - 84
Alignment:
Q  148 ttgtacgaagtgtacaaccactaattccactactctg 184  Q
    |||||||||||||||||||||||  ||||||||||||    
T  48 ttgtacgaagtgtacaaccactatctccactactctg 84  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 9968 - 9916
Alignment:
Q  129 gagcgttgacatagtacgtttgtacgaagtgtacaaccactaattccactact 181  Q
    ||||||||||| |||||  |||||||||||||| ||||||||  |||||||||    
T  9968 gagcgttgacaaagtacaattgtacgaagtgtaaaaccactacctccactact 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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