View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_722 (Length: 212)

Name: NF10145A_low_722
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_722
NF10145A_low_722
[»] chr6 (25 HSPs)
chr6 (1-212)||(28288663-28288874)
chr6 (1-212)||(12942814-12943025)
chr6 (5-208)||(23956551-23956754)
chr6 (1-208)||(13765031-13765238)
chr6 (5-186)||(19825671-19825852)
chr6 (5-163)||(25807821-25807979)
chr6 (5-205)||(27557351-27557551)
chr6 (5-197)||(15173626-15173818)
chr6 (5-197)||(23415593-23415785)
chr6 (54-197)||(15891742-15891885)
chr6 (57-197)||(15900827-15900967)
chr6 (83-208)||(31021882-31022004)
chr6 (120-205)||(10446015-10446099)
chr6 (128-205)||(1818763-1818839)
chr6 (104-208)||(29045050-29045154)
chr6 (160-208)||(23226018-23226066)
chr6 (5-67)||(31021998-31022060)
chr6 (6-42)||(10488095-10488131)
chr6 (6-42)||(16377197-16377233)
chr6 (6-42)||(16384521-16384557)
chr6 (160-208)||(25619058-25619106)
chr6 (121-204)||(35057348-35057430)
chr6 (158-208)||(20556193-20556243)
chr6 (6-42)||(16556894-16556930)
chr6 (6-42)||(16633450-16633486)
[»] chr3 (40 HSPs)
chr3 (1-212)||(12305747-12305958)
chr3 (1-212)||(13436923-13437134)
chr3 (5-212)||(54521451-54521658)
chr3 (5-208)||(42216-42419)
chr3 (5-208)||(16324701-16324904)
chr3 (1-212)||(29544190-29544379)
chr3 (83-212)||(3803580-3803709)
chr3 (1-186)||(14641733-14641917)
chr3 (5-197)||(16979599-16979791)
chr3 (1-197)||(5224008-5224203)
chr3 (5-197)||(26054606-26054798)
chr3 (16-197)||(22652471-22652652)
chr3 (5-197)||(15465783-15465975)
chr3 (104-194)||(29907422-29907512)
chr3 (104-194)||(29948588-29948678)
chr3 (104-194)||(29997742-29997832)
chr3 (119-208)||(48043640-48043729)
chr3 (131-208)||(18890238-18890315)
chr3 (104-208)||(45803499-45803602)
chr3 (104-199)||(3527327-3527421)
chr3 (116-208)||(18893482-18893574)
chr3 (142-208)||(55291762-55291828)
chr3 (118-195)||(25201936-25202013)
chr3 (142-208)||(43549816-43549882)
chr3 (142-208)||(10555132-10555198)
chr3 (154-208)||(46722747-46722801)
chr3 (6-69)||(18739585-18739648)
chr3 (145-208)||(43929219-43929282)
chr3 (1-67)||(3803520-3803586)
chr3 (158-208)||(6820011-6820061)
chr3 (158-208)||(10833466-10833516)
chr3 (130-208)||(50350979-50351057)
chr3 (6-42)||(1468563-1468599)
chr3 (5-44)||(10833663-10833702)
chr3 (7-42)||(25058423-25058458)
chr3 (158-206)||(6805091-6805139)
chr3 (6-42)||(12808629-12808665)
chr3 (160-208)||(16643926-16643974)
chr3 (160-208)||(24152545-24152593)
chr3 (160-208)||(50243656-50243704)
[»] chr2 (25 HSPs)
chr2 (1-212)||(10684089-10684300)
chr2 (1-212)||(20261844-20262055)
chr2 (5-212)||(23338556-23338763)
chr2 (52-212)||(13100891-13101051)
chr2 (5-205)||(25183876-25184076)
chr2 (5-197)||(18358140-18358332)
chr2 (5-197)||(21081142-21081334)
chr2 (5-195)||(31345808-31345998)
chr2 (1-197)||(21915307-21915503)
chr2 (121-208)||(21072849-21072936)
chr2 (121-206)||(149670-149755)
chr2 (142-208)||(20590443-20590509)
chr2 (142-208)||(41301090-41301156)
chr2 (121-198)||(28345208-28345284)
chr2 (5-58)||(29114000-29114053)
chr2 (158-204)||(1383818-1383864)
chr2 (158-208)||(12626594-12626644)
chr2 (158-208)||(43707208-43707258)
chr2 (6-42)||(11232162-11232198)
chr2 (150-206)||(14183630-14183686)
chr2 (6-42)||(22514009-22514045)
chr2 (6-42)||(23778621-23778657)
chr2 (6-42)||(24686547-24686583)
chr2 (6-42)||(28776611-28776647)
chr2 (158-206)||(36734616-36734664)
[»] chr7 (46 HSPs)
chr7 (1-212)||(23664279-23664490)
chr7 (1-212)||(29797235-29797446)
chr7 (1-212)||(29801054-29801265)
chr7 (1-212)||(11303872-11304083)
chr7 (1-212)||(16108015-16108226)
chr7 (5-208)||(11661794-11661997)
chr7 (5-208)||(14188454-14188657)
chr7 (9-186)||(17070474-17070651)
chr7 (5-197)||(13917744-13917936)
chr7 (5-197)||(1856572-1856763)
chr7 (1-197)||(32160373-32160569)
chr7 (5-197)||(25926471-25926663)
chr7 (5-197)||(16550175-16550367)
chr7 (5-197)||(16615295-16615487)
chr7 (104-199)||(18570432-18570526)
chr7 (142-208)||(4325921-4325987)
chr7 (54-204)||(8930933-8931083)
chr7 (142-208)||(14105588-14105654)
chr7 (142-208)||(14415605-14415671)
chr7 (104-206)||(13315245-13315347)
chr7 (121-204)||(19194995-19195078)
chr7 (120-206)||(38295405-38295490)
chr7 (142-206)||(12754829-12754893)
chr7 (141-208)||(17505125-17505192)
chr7 (141-208)||(17548022-17548089)
chr7 (120-199)||(36300812-36300890)
chr7 (142-208)||(44190377-44190443)
chr7 (83-197)||(29052355-29052462)
chr7 (141-208)||(13256517-13256584)
chr7 (121-204)||(37539252-37539334)
chr7 (142-208)||(13648107-13648173)
chr7 (158-208)||(13864523-13864573)
chr7 (158-208)||(14274063-14274113)
chr7 (158-208)||(16462910-16462960)
chr7 (158-208)||(25942312-25942362)
chr7 (158-198)||(708693-708733)
chr7 (6-42)||(7822137-7822173)
chr7 (6-42)||(7829448-7829484)
chr7 (6-42)||(27102461-27102497)
chr7 (6-42)||(27109809-27109845)
chr7 (6-42)||(27175829-27175865)
chr7 (6-42)||(38784553-38784589)
chr7 (142-206)||(47975055-47975119)
chr7 (142-204)||(19282870-19282932)
chr7 (150-208)||(39431348-39431406)
chr7 (5-49)||(3192613-3192657)
[»] chr5 (29 HSPs)
chr5 (4-212)||(37804229-37804437)
chr5 (1-212)||(9776790-9777001)
chr5 (1-208)||(27868735-27868942)
chr5 (5-208)||(33472724-33472927)
chr5 (5-212)||(41875749-41875956)
chr5 (5-197)||(17011415-17011607)
chr5 (5-197)||(29448527-29448719)
chr5 (121-208)||(21503943-21504029)
chr5 (104-197)||(265824-265917)
chr5 (104-208)||(20313061-20313165)
chr5 (142-208)||(24594224-24594290)
chr5 (144-208)||(24668318-24668382)
chr5 (144-208)||(24738087-24738151)
chr5 (144-208)||(24750856-24750920)
chr5 (9-91)||(263551-263633)
chr5 (142-208)||(18419277-18419343)
chr5 (130-208)||(21398960-21399038)
chr5 (6-58)||(7425001-7425053)
chr5 (121-198)||(36508915-36508992)
chr5 (6-42)||(17909157-17909193)
chr5 (6-42)||(21933192-21933228)
chr5 (6-42)||(21939362-21939398)
chr5 (6-42)||(36990588-36990624)
chr5 (1-56)||(8504181-8504236)
chr5 (5-56)||(26749720-26749771)
chr5 (158-208)||(30138245-30138295)
chr5 (5-34)||(1627715-1627744)
chr5 (6-42)||(22883850-22883886)
chr5 (6-42)||(35581464-35581500)
[»] chr4 (32 HSPs)
chr4 (1-212)||(15534806-15535017)
chr4 (1-212)||(36038495-36038706)
chr4 (5-212)||(33849431-33849638)
chr4 (5-212)||(49547100-49547307)
chr4 (5-208)||(28385932-28386135)
chr4 (5-186)||(9638696-9638877)
chr4 (9-197)||(10694418-10694606)
chr4 (5-197)||(15008655-15008847)
chr4 (5-196)||(40620219-40620410)
chr4 (9-197)||(10908184-10908372)
chr4 (141-208)||(16277448-16277515)
chr4 (141-208)||(53387058-53387125)
chr4 (121-206)||(16296674-16296759)
chr4 (142-206)||(14549474-14549538)
chr4 (142-206)||(19434823-19434887)
chr4 (142-206)||(35660712-35660776)
chr4 (161-205)||(9622330-9622374)
chr4 (141-208)||(18230565-18230632)
chr4 (158-208)||(15344776-15344826)
chr4 (6-42)||(14995768-14995804)
chr4 (160-208)||(23802565-23802613)
chr4 (1-56)||(40229989-40230044)
chr4 (5-56)||(44023916-44023967)
chr4 (1-56)||(44615913-44615968)
chr4 (158-208)||(12611752-12611802)
chr4 (6-88)||(18247863-18247945)
chr4 (5-34)||(30147544-30147573)
chr4 (6-50)||(15287800-15287844)
chr4 (160-208)||(15447538-15447586)
chr4 (1-61)||(19566226-19566286)
chr4 (6-42)||(19697922-19697958)
chr4 (6-42)||(19708507-19708543)
[»] chr1 (25 HSPs)
chr1 (5-212)||(297044-297251)
chr1 (5-208)||(28313037-28313240)
chr1 (5-186)||(8276174-8276355)
chr1 (5-197)||(29763805-29763997)
chr1 (5-197)||(50001163-50001355)
chr1 (88-186)||(38056857-38056954)
chr1 (83-197)||(46197918-46198032)
chr1 (104-199)||(34392552-34392646)
chr1 (121-206)||(8306407-8306492)
chr1 (99-206)||(17901966-17902074)
chr1 (142-208)||(23194673-23194739)
chr1 (5-64)||(38056955-38057014)
chr1 (142-208)||(22130186-22130252)
chr1 (121-206)||(24723624-24723709)
chr1 (158-208)||(45574180-45574230)
chr1 (1-67)||(46198026-46198092)
chr1 (141-206)||(21239207-21239272)
chr1 (142-206)||(6833990-6834054)
chr1 (142-206)||(7052177-7052241)
chr1 (9-58)||(9784653-9784702)
chr1 (160-208)||(13880697-13880745)
chr1 (6-42)||(17004033-17004069)
chr1 (6-42)||(38055901-38055937)
chr1 (6-39)||(18060527-18060560)
chr1 (5-34)||(29535680-29535709)
[»] scaffold0422 (1 HSPs)
scaffold0422 (5-212)||(3652-3859)
[»] chr8 (33 HSPs)
chr8 (5-208)||(8413909-8414112)
chr8 (5-192)||(11775411-11775598)
chr8 (5-163)||(17795921-17796079)
chr8 (1-208)||(25657676-25657883)
chr8 (5-197)||(16198523-16198715)
chr8 (5-197)||(23478769-23478961)
chr8 (5-197)||(19880517-19880702)
chr8 (9-197)||(14397082-14397269)
chr8 (75-208)||(19882706-19882839)
chr8 (5-197)||(26454400-26454585)
chr8 (104-205)||(22610431-22610531)
chr8 (121-205)||(23883973-23884056)
chr8 (5-58)||(24907463-24907516)
chr8 (121-205)||(36732649-36732733)
chr8 (158-208)||(22483620-22483670)
chr8 (1-56)||(22474436-22474491)
chr8 (158-208)||(25483602-25483652)
chr8 (6-42)||(643700-643736)
chr8 (6-42)||(15319938-15319974)
chr8 (6-42)||(15500307-15500343)
chr8 (4-56)||(17978729-17978781)
chr8 (6-42)||(22147101-22147137)
chr8 (160-208)||(23661140-23661188)
chr8 (161-208)||(20455831-20455878)
chr8 (161-208)||(20460809-20460856)
chr8 (6-40)||(272115-272149)
chr8 (6-40)||(829506-829540)
chr8 (158-212)||(20517214-20517268)
chr8 (150-198)||(12037336-12037384)
chr8 (160-208)||(17460368-17460416)
chr8 (6-42)||(18612076-18612112)
chr8 (164-208)||(20463042-20463086)
chr8 (6-42)||(22089322-22089358)
[»] scaffold0061 (2 HSPs)
scaffold0061 (1-205)||(14751-14953)
scaffold0061 (1-205)||(23809-24011)
[»] scaffold0453 (1 HSPs)
scaffold0453 (52-212)||(7167-7327)
[»] scaffold0001 (2 HSPs)
scaffold0001 (5-205)||(169128-169328)
scaffold0001 (5-205)||(176481-176681)
[»] scaffold0328 (1 HSPs)
scaffold0328 (8-186)||(18826-19004)
[»] scaffold0200 (1 HSPs)
scaffold0200 (5-197)||(18282-18474)
[»] scaffold0083 (1 HSPs)
scaffold0083 (5-197)||(1624-1816)
[»] scaffold0462 (3 HSPs)
scaffold0462 (5-197)||(10910-11102)
scaffold0462 (142-204)||(1094-1156)
scaffold0462 (142-204)||(6600-6662)
[»] scaffold0220 (2 HSPs)
scaffold0220 (7-186)||(13637-13816)
scaffold0220 (80-144)||(8887-8951)
[»] scaffold0436 (1 HSPs)
scaffold0436 (5-197)||(8647-8839)
[»] scaffold0138 (2 HSPs)
scaffold0138 (5-205)||(33800-33999)
scaffold0138 (91-197)||(20870-20976)
[»] scaffold0515 (1 HSPs)
scaffold0515 (5-195)||(4723-4913)
[»] scaffold0306 (1 HSPs)
scaffold0306 (5-195)||(4723-4913)
[»] scaffold0058 (2 HSPs)
scaffold0058 (5-126)||(6147-6268)
scaffold0058 (121-208)||(39973-40060)
[»] scaffold0051 (1 HSPs)
scaffold0051 (5-197)||(31832-32023)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-208)||(21939-22136)
[»] scaffold0034 (1 HSPs)
scaffold0034 (75-197)||(29389-29511)
[»] scaffold0730 (1 HSPs)
scaffold0730 (54-198)||(6676-6821)
[»] scaffold0148 (1 HSPs)
scaffold0148 (93-206)||(8616-8729)
[»] scaffold0205 (1 HSPs)
scaffold0205 (104-208)||(5778-5881)
[»] scaffold0035 (2 HSPs)
scaffold0035 (104-207)||(39258-39361)
scaffold0035 (121-208)||(43949-44035)
[»] scaffold0031 (1 HSPs)
scaffold0031 (104-205)||(127510-127610)
[»] scaffold0057 (2 HSPs)
scaffold0057 (83-197)||(70026-70140)
scaffold0057 (158-208)||(72278-72328)
[»] scaffold0026 (1 HSPs)
scaffold0026 (121-206)||(21925-22010)
[»] scaffold0151 (1 HSPs)
scaffold0151 (121-208)||(9899-9986)
[»] scaffold0117 (2 HSPs)
scaffold0117 (83-197)||(42438-42552)
scaffold0117 (7-67)||(42384-42444)
[»] scaffold0293 (2 HSPs)
scaffold0293 (104-197)||(19471-19564)
scaffold0293 (6-44)||(19583-19621)
[»] scaffold1276 (1 HSPs)
scaffold1276 (141-208)||(964-1031)
[»] scaffold0113 (1 HSPs)
scaffold0113 (145-208)||(35319-35382)
[»] scaffold0364 (1 HSPs)
scaffold0364 (158-208)||(8005-8055)
[»] scaffold0676 (1 HSPs)
scaffold0676 (121-206)||(2617-2702)
[»] scaffold0004 (1 HSPs)
scaffold0004 (99-206)||(66243-66349)
[»] scaffold0334 (1 HSPs)
scaffold0334 (121-208)||(1929-2016)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-56)||(17983-18038)
[»] scaffold0555 (1 HSPs)
scaffold0555 (158-208)||(8959-9009)
[»] scaffold0106 (1 HSPs)
scaffold0106 (150-208)||(21817-21875)
[»] scaffold0086 (1 HSPs)
scaffold0086 (150-204)||(35652-35706)
[»] scaffold0070 (1 HSPs)
scaffold0070 (158-208)||(8932-8982)
[»] scaffold0016 (1 HSPs)
scaffold0016 (142-208)||(174269-174335)
[»] scaffold0956 (1 HSPs)
scaffold0956 (159-208)||(2256-2305)
[»] scaffold0100 (2 HSPs)
scaffold0100 (9-66)||(27217-27274)
scaffold0100 (10-66)||(9777-9833)
[»] scaffold0877 (1 HSPs)
scaffold0877 (160-208)||(2188-2236)
[»] scaffold0290 (1 HSPs)
scaffold0290 (160-208)||(916-964)
[»] scaffold0149 (1 HSPs)
scaffold0149 (150-206)||(21372-21428)
[»] scaffold0125 (2 HSPs)
scaffold0125 (160-208)||(1211-1259)
scaffold0125 (130-208)||(28364-28442)
[»] scaffold0107 (1 HSPs)
scaffold0107 (6-42)||(30594-30630)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-42)||(38499-38535)
[»] scaffold1439 (1 HSPs)
scaffold1439 (158-208)||(917-967)
[»] scaffold0439 (1 HSPs)
scaffold0439 (158-208)||(12081-12131)
[»] scaffold0217 (1 HSPs)
scaffold0217 (98-208)||(28495-28604)
[»] scaffold0039 (1 HSPs)
scaffold0039 (6-56)||(10241-10291)
[»] scaffold0007 (1 HSPs)
scaffold0007 (158-212)||(19018-19072)
[»] scaffold0594 (1 HSPs)
scaffold0594 (153-206)||(2075-2128)
[»] scaffold0315 (1 HSPs)
scaffold0315 (6-42)||(18329-18365)
[»] scaffold0213 (1 HSPs)
scaffold0213 (6-42)||(28593-28629)
[»] scaffold0040 (1 HSPs)
scaffold0040 (158-206)||(106325-106373)


Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 28288874 - 28288663
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288874 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 28288775  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288774 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 28288675  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  28288674 tgaacatcgatt 28288663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 12942814 - 12943025
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12942814 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcactgtggcgagttgcgacgaaca 12942913  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12942914 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatc 12943013  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  12943014 tgaacatcgatt 12943025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 23956551 - 23956754
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  23956551 tgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 23956650  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  23956651 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 23956750  T
Q  205 catc 208  Q
    ||||    
T  23956751 catc 23956754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 13765031 - 13765238
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||| |  |||||||  ||  | |||||| ||||||||| |||||||||||||||||||||||||||  | |    
T  13765031 aacatgtgaaaaagacgcaagaacgcgaaacatggtatgctgtgactaggcagctcgtgaggcgagtgagtttactcgctgtggcgagttgcgacagaaa 13765130  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || ||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |    
T  13765131 actctatgggaacagaccagtttccagccaaaaacctaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacc 13765230  T
Q  201 tgaacatc 208  Q
    ||||||||    
T  13765231 tgaacatc 13765238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 19825852 - 19825671
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| |  |||||      
T  19825852 tgtgaaaaagacgcaagaacacgaaacagggtatgctgtcactgtgcagctcgcgaggcgagtaagtttaatcgctgtggcgagttgcggcagacaacta 19825753  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  19825752 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacctaaactccaaatttgataggaaacttaacctatg 19825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 25807821 - 25807979
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  25807821 tgtgaaaaagacgcaagaacgcaaaacaggtgatgctgtcactgtgcatctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 25807920  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaa 163  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25807921 tacgggaacagaccagtttccagctaaaaacccaatttttcatccacccaaaccccaaa 25807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 27557351 - 27557551
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||||||  ||||||||   ||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||  |    
T  27557351 tgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgattaagtgtactcgctgtggcgagttgcgacggacaaatc 27557450  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||||||||| ||||||  |||||| ||| |  ||||||| || |||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  27557451 tacgggaacagaccaattttcactccaaaagcccca-atttcatcgactcaaatcccaaatttgatagaaaactcaacctatgtttattctacaacctga 27557549  T
Q  204 ac 205  Q
    ||    
T  27557550 ac 27557551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 15173818 - 15173626
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||| |||||||||||||||| ||| |||||||||   ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||  |    
T  15173818 tgtgaaaaacacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagttagtttactcgctgtggcgagttgcgacggacaaatc 15173719  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||| ||||||||  |||||| ||| |  ||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||    
T  15173718 tacgggaacagactagttttcactccaaaagcccca-atttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttatcctaca 15173626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 23415593 - 23415785
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||||||  ||||||||   ||| |||||||||||||||||||| |||||||| |||||| |||||||| | ||  |    
T  23415593 tgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtactcgctatggcgaattgcgacggaaaaatc 23415692  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||||||||| |||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23415693 tacgggaacagaccagttgtcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 23415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 15891885 - 15891742
Alignment:
Q  54 ctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacc 152  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||  |||||| ||| |  ||||||| |||    
T  15891885 ctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacc 15891787  T
Q  153 caaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  15891786 caaatcccaaatttgataggaaactcaacctatgtttattttaca 15891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 15900967 - 15900827
Alignment:
Q  57 gcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaa 155  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||    
T  15900967 gcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaa 15900869  T
Q  156 accccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    | ||||||||||||||||||||||||||||||||||| ||||    
T  15900868 atcccaaatttgataggaaactcaacctatgtttattttaca 15900827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 31022004 - 31021882
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacc 182  Q
    |||||||||||||  ||||| |||||||||||||||||    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||    
T  31022004 ggcgagttgcgacagacaactctacgggaacagaccagc---cagccaaaaactcaaattttcatctacccaaaccccaaatttgataggaaacttaacc 31021908  T
Q  183 tatgtttattctacaatctgaacatc 208  Q
    |||| ||||||||||| |||||||||    
T  31021907 tatgattattctacaacctgaacatc 31021882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 10446015 - 10446099
Alignment:
Q  120 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 205  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||  | |||||||||||||||||||||||||| |||||||||    
T  10446015 gttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaaaaggaaactcaacctatgtttattctataatctgaac 10446099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 1818763 - 1818839
Alignment:
Q  128 ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 205  Q
    |||||||||||||||| || |||||||||  |||||||  | ||||||||||||||||||||||||||||||||||||    
T  1818763 ccaaaaacccaatttt-caaccacccaaattccaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 1818839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 29045050 - 29045154
Alignment:
Q  104 ctacgggaacagaccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctg 202  Q
    |||||||||||||||||||||||  |||| | ||| | ||| |||| || |||| |||||||||||||| |||||| ||||||| ||||||||||| |||    
T  29045050 ctacgggaacagaccagttttcactccaatagccccaattt-catcaactcaaatcccaaatttgatagaaaactctacctatgattattctacaacctg 29045148  T
Q  203 aacatc 208  Q
    ||||||    
T  29045149 aacatc 29045154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 23226066 - 23226018
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  23226066 caaatttgataggaaacttaacctatgattattctacaacctgaacatc 23226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 31022060 - 31021998
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagt 67  Q
    ||||||||||||||||||| |||||| ||| |||||||||   ||| ||||||||||||||||    
T  31022060 tgtgaaaaagacgcaagaatgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagt 31021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 10488095 - 10488131
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  10488095 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 10488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 16377233 - 16377197
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16377233 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 16384557 - 16384521
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16384557 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 16384521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 25619106 - 25619058
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  25619106 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 25619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 35057348 - 35057430
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||| ||||||| |||| ||| |||| ||||||| |||||||||||||| ||||| ||| || | ||||||||||| |||||    
T  35057348 ttttcacccaaaaatccaaattt-catctacccaaatcccaaatttgatagaaaacttaacttaagattattctacaacctgaa 35057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 20556243 - 20556193
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  20556243 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatc 20556193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 16556930 - 16556894
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||||| |||||||||||||||||| |||||||    
T  16556930 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 16556894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 16633486 - 16633450
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||||| |||||||||||||||||| |||||||    
T  16633486 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 16633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 12305747 - 12305958
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12305747 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 12305846  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12305847 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 12305946  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  12305947 tgaacatcgatt 12305958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 13436923 - 13437134
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13436923 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 13437022  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13437023 actctatgggaacagaccagttttcagccaaaaacccaatttttcattcacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacc 13437122  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  13437123 tgaacatcgatt 13437134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 54521451 - 54521658
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  54521451 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 54521550  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54521551 tacggaaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatatttattctacaatctgaa 54521650  T
Q  205 catcgatt 212  Q
    ||||||||    
T  54521651 catcgatt 54521658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 42216 - 42419
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||| ||||| ||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||| |    
T  42216 tgtgaaaaagacgcaagaacacgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagtttcgacagacaactc 42315  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  42316 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 42415  T
Q  205 catc 208  Q
    ||||    
T  42416 catc 42419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 16324904 - 16324701
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||| |||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  16324904 tgtgaaaaagacgcaagaatgcgaaacaggggatgctgtcaaagtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 16324805  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||||||| |||||    
T  16324804 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaagctataattattctacaacctgaa 16324705  T
Q  205 catc 208  Q
    ||||    
T  16324704 catc 16324701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 29544379 - 29544190
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||                      |||||||| ||||||||    
T  29544379 aacatgtgaaaaagatgcaagaacgcgaaacaggtgatgccgtctctgtgaagctcgcgag----------------------gcgagttgtgacgaaca 29544302  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29544301 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccactcaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 29544202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 3803580 - 3803709
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacc 182  Q
    |||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3803580 ggcgagttgcgacagacaactctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacc 3803679  T
Q  183 tatgtttattctacaatctgaacatcgatt 212  Q
    ||||||||||||||||||||||||||||||    
T  3803680 tatgtttattctacaatctgaacatcgatt 3803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 14641917 - 14641733
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||| ||||   ||| |||||||| || || |||||||||||||||||| |||| ||||||||||||||||||||  |||    
T  14641917 aacatgtgaaaaagacgcaagaacacgaatagggt-atgctgtcactatgcagctcgcgaggcgagtaaatttattcgctgtggcgagttgcgacagaca 14641819  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
     | || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14641818 gcactgcgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatg 14641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 16979599 - 16979791
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||  |    
T  16979599 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttacgacagacaaatc 16979698  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  16979699 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaattccaaatttgataggaaactcaacctatgtttattctaca 16979791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5224008 - 5224203
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||   ||| ||||| |||||||||||||| |||||||||||||||||||||||  |||    
T  5224008 aacatgtgaaaaagacgcaagaacgcgaaacaggaaatgctgtcaaagtgcagctcacgaggcgagtaagtgtactcgctgtggcgagttgcgacagaca 5224107  T
Q  101 accctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |  ||||||||||| || ||||||||  |||||| |||||  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5224108 aatctacgggaacaaactagttttcactccaaaaccccaa--tttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 5224203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 26054798 - 26054606
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||| ||  ||||||||   ||| |||||||||||||||||||| |||| ||||||||||||||||||| ||||  |    
T  26054798 tgtgaaaaagacgcaagaacgcgaaactgggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtacttgctgtggcgagttgcgacggacaaatc 26054699  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||| |||||||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26054698 tacgagaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 26054606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 22652471 - 22652652
Alignment:
Q  16 cgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacag 115  Q
    ||||||||||||||||||| |||||||||   ||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||  ||||||||||||    
T  22652471 cgcaagaacgcgaaacaggggatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcaacggacaaatctacgggaacag 22652570  T
Q  116 accagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    || ||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22652571 actagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 22652652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 15465783 - 15465975
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||| ||||||||||||||||  ||||||||   |||||||||||||||||||||||| |||||||||||| | ||||||||| ||||  |    
T  15465783 tgtgaaaaagacgaaagaacgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtaagtgtactcgctgtggtgggttgcgacggacaaatc 15465882  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||| |||||||||||||||||  | |||| ||    ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  15465883 tacgagaacagaccagttttcactctaaaagccccaatttcatcaacccaaatcccatatttgataggaaactcaacctatgtttattctaca 15465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 29907422 - 29907512
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattct 194  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || |||||||||||||||    
T  29907422 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29907512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 29948588 - 29948678
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattct 194  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || |||||||||||||||    
T  29948588 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 29997742 - 29997832
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattct 194  Q
    ||||||||| | ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| || |||||||||||||||    
T  29997742 ctacgggaagaaaccagttttcagccaaaaacccaatttttcaaccacccaaattccaaatttgataggaaattctacctatgtttattct 29997832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 48043729 - 48043640
Alignment:
Q  119 agttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||    
T  48043729 agttttcatccaaaaacccaatttttcaaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacttgaacatc 48043640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 18890238 - 18890315
Alignment:
Q  131 aaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||    
T  18890238 aaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatc 18890315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 45803602 - 45803499
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||| | ||| |||||||||||||||||||||||| || |||||| || ||||||||  ||||||||||||||||||||||||||||||| |||     
T  45803602 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccaccctaatcccaaattcaataggaaactcaacctatgtttattctacaacctgg 45803504  T
Q  204 acatc 208  Q
    |||||    
T  45803503 acatc 45803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 3527421 - 3527327
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 199  Q
    ||||||||| | |||  ||||||||||||||||||||||| || ||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  3527421 ctacgggaagaaacctattttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaat 3527327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 18893482 - 18893574
Alignment:
Q  116 accagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||| |||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||| ||||  ||||||||    
T  18893482 accatttttcaccccaaaacccaaattttcatccacccaaaccccaaatttgatagaaaacttaacctatgattattccacaacgtgaacatc 18893574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 55291828 - 55291762
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  55291828 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 55291762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 25201936 - 25202013
Alignment:
Q  118 cagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcta 195  Q
    ||||||||||||||||||| || |||||| ||| ||||| ||||||||  ||||||||||||||||||||||||||||    
T  25201936 cagttttcagccaaaaaccaaaattttcaaccatccaaatcccaaattcaataggaaactcaacctatgtttattcta 25202013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 43549882 - 43549816
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  43549882 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 43549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 10555132 - 10555198
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  10555132 tttcatctaccgaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 10555198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 46722801 - 46722747
Alignment:
Q  154 aaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  46722801 aaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 46722747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 18739585 - 18739648
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaa 69  Q
    |||||||||||||||||||||||||||||  |||||||| ||||| |||||||  |||||||||    
T  18739585 gtgaaaaagacgcaagaacgcgaaacagggaatgctgtcactgtgcagctcgcctggcgagtaa 18739648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 43929219 - 43929282
Alignment:
Q  145 catccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||| ||||||| |||||||||||||||||||| |||||| | ||||||||||| || ||||||    
T  43929219 catctacccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatc 43929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3803520 - 3803586
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagt 67  Q
    ||||||||||||||||||||| |||||||| | | |||||||||   ||| ||||||||||||||||    
T  3803520 aacatgtgaaaaagacgcaagcacgcgaaataagggatgctgtcaaagtgtagctcgcgaggcgagt 3803586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 6820011 - 6820061
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  6820011 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatc 6820061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 10833516 - 10833466
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||| |||||    
T  10833516 cccaaatttgataggaaacttaacctatgattattctgcaatctggacatc 10833466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 50351057 - 50350979
Alignment:
Q  130 aaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||  | ||||| ||||||| ||||||||| |||| ||||||  |||||||||||| ||||| |||||||||    
T  50351057 aaaaacccaaaatctcatctacccaaatcccaaattttatagaaaactcttcctatgtttattatacaacctgaacatc 50350979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 1468599 - 1468563
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1468599 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 1468563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 10833702 - 10833663
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtc 44  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  10833702 tgtgaaaaagacgcaagaacgcgaaacagggtatgctgtc 10833663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 25058423 - 25058458
Alignment:
Q  7 tgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||||||||||||||||||||||| |||||||    
T  25058423 tgaaaaagacgcaagaacgcgaaacaggggatgctg 25058458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 6805139 - 6805091
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||||||||| ||||| ||| |||| ||||||||||| |||||||    
T  6805139 cccaaatttgatagaaaacttaacatatgattattctacaacctgaaca 6805091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 12808629 - 12808665
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  12808629 gtgaaaaagacgcaagaacacgaaacaggggatgctg 12808665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 16643926 - 16643974
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| |||||| || |||||||| ||||||||||| |||||||||    
T  16643926 caaatttgttaggaagcttaacctatgattattctacaacctgaacatc 16643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 24152593 - 24152545
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| || |||||| |||||||| ||||||||||| |||||||||    
T  24152593 caaatttgttatgaaacttaacctatgattattctacaacctgaacatc 24152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 50243656 - 50243704
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| |||||||||||  ||||||||    
T  50243656 caaatttgttaggaaacttaacctatgattattctacaacatgaacatc 50243704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 10684300 - 10684089
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684300 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 10684201  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10684200 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatc 10684101  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  10684100 tgaacatcgatt 10684089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20261844 - 20262055
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20261844 aacatgtgaaaaagacggaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 20261943  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20261944 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatc 20262043  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  20262044 tgaacatcgatt 20262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 23338763 - 23338556
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23338763 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 23338664  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23338663 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaa 23338564  T
Q  205 catcgatt 212  Q
    ||||||||    
T  23338563 catcgatt 23338556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 52 - 212
Target Start/End: Complemental strand, 13101051 - 13100891
Alignment:
Q  52 agctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccac 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||  ||||||| |||||||||||||||||||||||||||    
T  13101051 agctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacatctctacgggaacatgccagtttccagccaaaaacccaatttttcatccac 13100952  T
Q  152 ccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatcgatt 212  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  13100951 ccaaaccccaaatttgataggaaacttaacctatgattattctacagtctgaacatcgatt 13100891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 25183876 - 25184076
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||| | |||||||||   ||| |||||||||||||||||||| |||||||||||||||||||||||| ||||  |    
T  25183876 tgtgaaaaagacgcaagaacgcgaaacaagggatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatc 25183975  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  25183976 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagtctga 25184074  T
Q  204 ac 205  Q
    ||    
T  25184075 ac 25184076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 18358332 - 18358140
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||| |||||||||   ||| | ||||||||||| |||||||||||| |||||||||||||||||| ||||  |    
T  18358332 tgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcaactcgcgaggcgggtaagtttactcactgtggcgagttgcgacggacaaatc 18358233  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18358232 tacgggaacaaaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 18358140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 21081334 - 21081142
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| | |||||||||||||||||||||||||||||||||||| |||||| | ||  |    
T  21081334 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcaactcgcgaggcgagtaagtttactcgctgtggcgagtggcgacggaaaaatc 21081235  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||| ||||| |||||||  |||||| ||| |  ||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||    
T  21081234 tacgggaaaagacccgttttcactccaaaagcccca-atttcatcaacccaaatcctaaatttgataggaaactcaacttatgtttattctaca 21081142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 31345808 - 31345998
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||| ||||||||| ||| |||||   ||||||||   ||| |||||||||||||||||||| |||||||||||||||||||||||| ||||  |    
T  31345808 tgtgaaaaaaacgcaagaatgcggaacagagaatgctgtcaaagtgtagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatc 31345907  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcta 195  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  31345908 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaataccaaatttgataggaaactcaacctatgtttattcta 31345998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 21915307 - 21915503
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||   ||| || |||||||||||||| |||||||||| |||||||||||||||| |||    
T  21915307 aacatgtgaaaaagatgcaagaacgcgaaacaggggatgatgtcaaagtgcagatcgcgaggcgagtatgtttactcgccgtggcgagttgcgacggaca 21915406  T
Q  101 accctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |   || ||||||| |||||||||||  |||||| ||| |  ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  21915407 aatgtatgggaacaaaccagttttcactccaaaagcccca-atttcatcaacctaaatcccaaattttataggaaactcaacctatgtttattctaca 21915503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 21072936 - 21072849
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||    
T  21072936 ttttcaccccaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattccacaacctgaacatc 21072849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 149755 - 149670
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  149755 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 149670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 20590509 - 20590443
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||| | |||||||||    
T  20590509 tttcatctacccaaaccccaaatttgatagaaaacttaacctatgattattctaccacctgaacatc 20590443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 41301156 - 41301090
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  41301156 tttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatc 41301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 28345284 - 28345208
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaa 198  Q
    |||||| |||||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  28345284 ttttcacccaaaaacccaaatttt-atctacctaaatcccaaatttgataggaaacttaacctatgattattctacaa 28345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29114000 - 29114053
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgc 58  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||| |||||||    
T  29114000 tgtgaaaaagacgcaagaacgcgaaacaggggatgttgtcactgtgcagctcgc 29114053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 1383864 - 1383818
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  1383864 cccaaatttgataggaaacttaacctatgattattctacaacctgaa 1383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 12626644 - 12626594
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||  |||||||||||||| |||||||||||||||| |||||||||    
T  12626644 cccaaattcaataggaaactcaacttatgtttattctacaacctgaacatc 12626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 43707258 - 43707208
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  43707258 cccaaatttgataggaaacttaacctatgattattctacaacttgaacatc 43707208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 11232198 - 11232162
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11232198 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 11232162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 14183686 - 14183630
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||  |||||||||||||||||||| ||||||| |||||| |||| |||||||    
T  14183686 acccaaattccaaatttgataggaaactctacctatgattattccacaacctgaaca 14183630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 22514045 - 22514009
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22514045 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 22514009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 23778657 - 23778621
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  23778657 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 23778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 24686583 - 24686547
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24686583 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 24686547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 28776647 - 28776611
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  28776647 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 28776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 36734664 - 36734616
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||||||||||||||| |||||| | ||||||||||| |||||||    
T  36734664 cccaaatttgataggaaacttaacctaagattattctacaacctgaaca 36734616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 23664490 - 23664279
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23664490 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacgaaca 23664391  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23664390 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 23664291  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  23664290 tgaacatcgatt 23664279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 29797235 - 29797446
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29797235 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 29797334  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29797335 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatc 29797434  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  29797435 tgaacatcgatt 29797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 29801054 - 29801265
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29801054 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 29801153  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29801154 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatc 29801253  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  29801254 tgaacatcgatt 29801265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 11303872 - 11304083
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11303872 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgtagctcgcgaggcgagtatgtttactcgctgtggcgagttgcgacgaaca 11303971  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11303972 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaacaccaaatttgataggaaactcaacctatgtttattctacaatc 11304071  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  11304072 tgaacatcgatt 11304083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16108226 - 16108015
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16108226 aacatgtgaaaaagacgcaagaacgcgaaataggtgatgctgtcgctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 16108127  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16108126 actctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 16108027  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  16108026 tgaacatcgatt 16108015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 11661794 - 11661997
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  11661794 tgtgaaaaagacgcaagaacgcggaacagggtatgctgtcactgggcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 11661893  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||| |||||    
T  11661894 tacgggaacagaccagtttctagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctataattagtctacaacctgaa 11661993  T
Q  205 catc 208  Q
    ||||    
T  11661994 catc 11661997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 14188657 - 14188454
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||| |||||||||||||  |||||||| ||| | ||||||| ||||||||||||||| ||||||||||||||||||||    ||| |    
T  14188657 tgtgaaaaagacgcaaaaacgcgaaacagggtatgctgtcactgggcagctcgcaaggcgagtaagtttaatcgctgtggcgagttgcgacaggaaactc 14188558  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||    
T  14188557 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacttgaa 14188458  T
Q  205 catc 208  Q
    ||||    
T  14188457 catc 14188454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 17070651 - 17070474
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacg 108  Q
    ||||||||||||||||||||||||||  ||| |||| ||||| |||||||| | ||||||||||||||||| |||||||||||||||  ||||| |||||    
T  17070651 aaaaagacgcaagaacgcgaaacagggtatgttgtcactgtgcagctcgcgcgacgagtaagtttactcgcagtggcgagttgcgacagacaactctacg 17070552  T
Q  109 ggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17070551 ggagcagactagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatg 17070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 13917936 - 13917744
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||| |||||| |||||||||||  ||||||||   |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  |    
T  13917936 tgtgaaaaagaagcaagaccgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtgagtgtactcgctgtggcgagttgcgacggacaaatc 13917837  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  13917836 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccagatcccaaatttgataggaaactcaacctatgtttattctaca 13917744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 1856763 - 1856572
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||||||  ||||||||   |||| ||||||||||||||||||| |||||||||||||||||||||||  ||||  |    
T  1856763 tgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtga-gctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacagacaaatc 1856665  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||| ||||||| |  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1856664 tacgggaacagatcagtttttactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 1856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 32160569 - 32160373
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||   ||| |||||||| |||||||||||||||||||||||||||||||||||| | |    
T  32160569 aacatgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgctgtggcgagttgcgacggaaa 32160470  T
Q  101 accctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |  |||||  |||| |||||||||||  |||||| ||| |  ||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||    
T  32160469 aatctacgcaaacaaaccagttttcactccaaaagcccca-atttcatcaatccaaatctcaaatttgataggaaactcaacctatgtttattctaca 32160373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 25926663 - 25926471
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| |||  ||||||||   ||| || ||||||||||||||||| |||||||||||||||||||||||| ||||  |    
T  25926663 tgtgaaaaagacgcaagaacgcgaaatagggaatgctgtcaaagtgcagatcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatc 25926564  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||  ||| |  ||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  25926563 tacgggaacagaccagttttcactccaaatgcccca-atttcatcaacccaaatcccaaattttataggaaactgaacctatgtttattctaca 25926471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 16550367 - 16550175
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||| |||||||| |||||||||   ||| || |||||||||||||||||||||||||||||||||||||||| |  |||  |    
T  16550367 tgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgatgggcaaatc 16550268  T
Q  105 tacgggaacagaccagttttc-agccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    || ||||||| ||||||||||   |||||| ||| |  ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16550267 tatgggaacataccagttttctttccaaaagcccca-atttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctaca 16550175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 16615295 - 16615487
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||| |||||||| |||||||||   ||| || |||||||||||||||||||||||||||||||||||||||| |  |||  |    
T  16615295 tgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgatgggcaaatc 16615394  T
Q  105 tacgggaacagaccagttttc-agccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    || ||||||| ||||||||||   |||||| ||| |  ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16615395 tatgggaacataccagttttctttccaaaagcccca-atttcatcaacccaaatcccaaatttgatagaaaactcaacctatgtttattctaca 16615487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 18570432 - 18570526
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 199  Q
    ||||||||| | ||| |||||||||||||||||||||||| || ||||||||| ||||||||  | |||||| |||||||||||||||||||||||    
T  18570432 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaagaggaaattcaacctatgtttattctacaat 18570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 4325921 - 4325987
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  4325921 tttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 4325987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 8931083 - 8930933
Alignment:
Q  54 ctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccaccc 153  Q
    ||||||||||||  ||| | |||||| |||||||||  ||||  |||   ||||||||| | ||  |||||||||||||||| |||||||||| ||||||    
T  8931083 ctcgcgaggcgaacaagatcactcgccgtggcgagtgacgacagacagttctacgggaagaaacatgttttcagccaaaaactcaatttttcaaccaccc 8930984  T
Q  154 aaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||| | ||||||  | | ||||||||||||||||||||| |||||||||||    
T  8930983 aaatctcaaattcaaaaagaaactcaacctatgtttattatacaatctgaa 8930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 14105654 - 14105588
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  14105654 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 14105588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 14415671 - 14415605
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  14415671 tttcatcaacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 14415605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 13315347 - 13315245
Alignment:
Q  104 ctacgggaacagaccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctg 202  Q
    ||||| |||||||||||||||||  |||||||||| | ||| |||| ||||||| |||||||||||||| |||||| ||||||| ||||||||||| |||    
T  13315347 ctacgagaacagaccagttttcactccaaaaaccccaattt-catcaacccaaatcccaaatttgatagaaaactctacctatgattattctacaacctg 13315249  T
Q  203 aaca 206  Q
    ||||    
T  13315248 aaca 13315245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 19194995 - 19195078
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  19194995 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaatctgaa 19195078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 38295405 - 38295490
Alignment:
Q  120 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||  ||||||||||| ||||||| ||||||||||  |||||||    
T  38295405 gttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactctacctatgattattctacatcctgaaca 38295490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 12754893 - 12754829
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  12754893 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 12754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 17505192 - 17505125
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  17505192 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 17505125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 17548022 - 17548089
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  17548022 ttttcatctacccaaactccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 17548089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 36300890 - 36300812
Alignment:
Q  120 gttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 199  Q
    ||||||||||||||||||||||||  ||| ||||||| || |||||  | ||||||||||||||||||||||||||||||    
T  36300890 gttttcagccaaaaacccaattttcaatc-acccaaatcctaaattcaaaaggaaactcaacctatgtttattctacaat 36300812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 44190443 - 44190377
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| |||| ||||||||||||||| |||||||| ||||||||||| |||||||||    
T  44190443 tttcatctacccaaatcccacatttgataggaaacttaacctatgattattctacaacctgaacatc 44190377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 29052462 - 29052355
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaa--cccaatttttcatccacccaaaccccaaatttgataggaaactcaa 180  Q
    |||||||||||||| ||||  |||||||||||||||||||||||  | ||||  ||||||||  |||| |||||||       |||||||||||||||||    
T  29052462 ggcgagttgcgacggacaaatctacgggaacagaccagttttcactccaaaagtcccaattt--catcaacccaaa-------tttgataggaaactcaa 29052372  T
Q  181 cctatgtttattctaca 197  Q
    |||||||||||||||||    
T  29052371 cctatgtttattctaca 29052355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 13256517 - 13256584
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||| |||||||||||||||||||| | |||||| |||| ||||||  ||||||||    
T  13256517 ttttcatcaacccaaatcccaaatttgataggaaacttatcctatgattatcctacaacttgaacatc 13256584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 37539252 - 37539334
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||| ||||||| |||| ||| |||| |||||||  ||||||||||||||||||| |||||| | ||||||||||| |||||    
T  37539252 ttttcacccaaaaatccaaattt-catctacccaaattccaaatttgataggaaacttaacctaagattattctacaacctgaa 37539334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 13648107 - 13648173
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||| ||| |||||||||||||||||| | |||||||| ||||||||||| || ||||||    
T  13648107 tttcatctacctaaatcccaaatttgataggaaatttaacctatgattattctacaacctaaacatc 13648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 13864573 - 13864523
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||||||||| |||||||| ||||| |||||||||||||||    
T  13864573 cccaaatttgttaggaaacttaacctatgattattatacaatctgaacatc 13864523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 14274063 - 14274113
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  14274063 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatc 14274113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 16462910 - 16462960
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  16462910 cccaaatttgataggaaacttaatctatgattattctacaacctgaacatc 16462960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 25942312 - 25942362
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||| | ||||||||||| |||||||||    
T  25942312 cccaaatttgataggaaacttaacctaagattattctacaacctgaacatc 25942362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 708733 - 708693
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaa 198  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  708733 cccaaatttgataggaaacttaacctatgattattctacaa 708693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 7822137 - 7822173
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7822137 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 7822173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 7829448 - 7829484
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7829448 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 7829484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 27102497 - 27102461
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27102497 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27102461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 27109845 - 27109809
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27109845 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27109809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 27175829 - 27175865
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27175829 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 27175865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 38784589 - 38784553
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38784589 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38784553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 47975119 - 47975055
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| |||||||  ||||||||||||| ||||| || ||||| ||||||||||| |||||||    
T  47975119 tttcatctacccaaattccaaatttgatagaaaacttaatctatgattattctacaacctgaaca 47975055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 19282870 - 19282932
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||| | |||||  ||||||||||||| |||||| ||||||| ||||||||||| |||||    
T  19282870 tttcatcaatccaaattccaaatttgatagaaaactctacctatgattattctacaacctgaa 19282932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 39431406 - 39431348
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||| ||||||||||||||  ||| |||| ||||||||||| |||||||||    
T  39431406 acccaaatcccatatttgataggaaacataacatatgattattctacaacctgaacatc 39431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 3192657 - 3192613
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgt 49  Q
    |||||||||||||||||||||| ||||||| |||| |||| ||||    
T  3192657 tgtgaaaaagacgcaagaacgcaaaacaggggatgttgtcactgt 3192613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 37804437 - 37804229
Alignment:
Q  4 atgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaacc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37804437 atgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacgaacaacc 37804338  T
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37804337 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatctga 37804238  T
Q  204 acatcgatt 212  Q
    |||||||||    
T  37804237 acatcgatt 37804229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 9776790 - 9777001
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9776790 aacatgtgaaaaagacggaagaacgcgaaactggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 9776889  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9776890 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgtttattctacaatc 9776989  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  9776990 tgaacatcgatt 9777001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 27868942 - 27868735
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||    
T  27868942 aacatgtgaaaaagacgcaagaacgtgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagaca 27868843  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |    
T  27868842 actctacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacc 27868743  T
Q  201 tgaacatc 208  Q
    ||||||||    
T  27868742 tgaacatc 27868735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 33472927 - 33472724
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  33472927 tgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 33472828  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  33472827 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaa 33472728  T
Q  205 catc 208  Q
    ||||    
T  33472727 catc 33472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 41875956 - 41875749
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||  |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||  ||| | |    
T  41875956 tgtgaaaaagacgcaagaacgcgaaacagaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacagctc 41875857  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  41875856 tacgggaacatgccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacagtctgaa 41875757  T
Q  205 catcgatt 212  Q
    ||||||||    
T  41875756 catcgatt 41875749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 17011415 - 17011607
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||  |||||||| |||||||||   ||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||  |    
T  17011415 tgtgaaaaagacgcaagaacatgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgcggtggcgacttgcgacggacaaatc 17011514  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  || ||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17011515 tacgggaacagaccagttttcactcctaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 17011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 29448527 - 29448719
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||| ||||   ||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||  |    
T  29448527 tgtgaaaaagacgcaagaacgcgaaacaggggatgttgtcaaagtgcagctcgcgaggcgagtaggtttactcgctgtagcgagttgcgacggacaaatc 29448626  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| || |||| | ||||||||||||||||||||||||||||||||||||||    
T  29448627 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctaca 29448719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 21503943 - 21504029
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||    
T  21503943 ttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgattattctacaacctgaacatc 21504029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 265824 - 265917
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||||||||||||||  | |||| ||    ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  265824 ctacgggaacagaccagttttcactcgaaaagccccaatttcatcaatccaaatcccaaatttgataggaaactcaacctatgtttattctaca 265917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 20313061 - 20313165
Alignment:
Q  104 ctacgggaacagaccagtttt-cagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctg 202  Q
    ||||||||| | ||||||||| ||||||||||||||||||| || ||||||||| ||||||||  ||||||||||||| |||||||||||||| ||  ||    
T  20313061 ctacgggaagaaaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaatctatgtttattctataacttg 20313159  T
Q  203 aacatc 208  Q
    ||||||    
T  20313160 aacatc 20313165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 24594290 - 24594224
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  24594290 tttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 24594224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 24668382 - 24668318
Alignment:
Q  144 tcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  24668382 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 24668318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 24738151 - 24738087
Alignment:
Q  144 tcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  24738151 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 24738087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 24750920 - 24750856
Alignment:
Q  144 tcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  24750920 tcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 24750856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 263551 - 263633
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttg 91  Q
    |||||||||||||||| ||||||||| |||| ||||   ||| ||||||||| ||||||||||||||||  ||||||||||||    
T  263551 aaaaagacgcaagaacacgaaacaggggatgatgtcaaagtgcagctcgcgaagcgagtaagtttactccttgtggcgagttg 263633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 18419277 - 18419343
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| | |||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  18419277 tttcatctacccaaatctcaaatttgataggaaacttaatctatgattattctacaacctgaacatc 18419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 21399038 - 21398960
Alignment:
Q  130 aaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||  | ||||| ||||||| ||||||||| |||| ||||||  |||||||||||||||||| |||||||||    
T  21399038 aaaaacccaaaatctcatctacccaaatcccaaattttatagaaaactcttcctatgtttattctacaacctgaacatc 21398960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 7425001 - 7425053
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgc 58  Q
    |||||||||| |||||||||||||||||| | ||||||| |||||||||||||    
T  7425001 gtgaaaaagatgcaagaacgcgaaacagggggtgctgtcactgtgaagctcgc 7425053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 36508992 - 36508915
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaa 198  Q
    |||||| ||||||| || |  ||| ||| ||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  36508992 ttttcacccaaaaaacccaaatttgatctacctaaatcccaaatttgataggaaacttaacctatgattattctacaa 36508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 17909157 - 17909193
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17909157 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 17909193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 21933228 - 21933192
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  21933228 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 21933192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 21939398 - 21939362
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  21939398 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 21939362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 36990624 - 36990588
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36990624 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 36990588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8504236 - 8504181
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||||||  |||||||| |||| |||| ||||| |||||    
T  8504236 aacatgtgaaaaagacgcaagaacatgaaacaggagatgttgtcactgtgtagctc 8504181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 26749720 - 26749771
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  26749720 tgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 26749771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 30138295 - 30138245
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| | ||||||| |||||||| ||||||||||| |||||||||    
T  30138295 cccaaatttgtttggaaacttaacctatgattattctacaacctgaacatc 30138245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 1627744 - 1627715
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacagg 34  Q
    ||||||||||||||||||||||||||||||    
T  1627744 tgtgaaaaagacgcaagaacgcgaaacagg 1627715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 22883886 - 22883850
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||| |||||||||||||||||||| |||||||    
T  22883886 gtgaaaaatacgcaagaacgcgaaacaggggatgctg 22883850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 35581464 - 35581500
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||||| |||||||||||||||||| |||||||    
T  35581464 gtgaaaaagatgcaagaacgcgaaacaggagatgctg 35581500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 15534806 - 15535017
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15534806 aacatgtgaaaaagacggaagaacgcgaaacaggtgatgctgtctctgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 15534905  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15534906 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacatatgtttattctacaatc 15535005  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  15535006 tgaacatcgatt 15535017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 36038495 - 36038706
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36038495 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgcatctcgcgaggcgagtaagtttactcgctatggcgagttgcgacgaaca 36038594  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36038595 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 36038694  T
Q  201 tgaacatcgatt 212  Q
    ||||||||||||    
T  36038695 tgaacatcgatt 36038706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 33849431 - 33849638
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  33849431 tgtgaaaaagacgcaagaacacgaaacaggtgatgctatcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacagctc 33849530  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  33849531 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacatgaa 33849630  T
Q  205 catcgatt 212  Q
    ||||||||    
T  33849631 catcgatt 33849638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 49547307 - 49547100
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||  |||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49547307 tgtgaaaaagacgcaagaacgcgaaatagaggatgatgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 49547208  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49547207 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 49547108  T
Q  205 catcgatt 212  Q
    ||||||||    
T  49547107 catcgatt 49547100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 28385932 - 28386135
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||  |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  28385932 tgtgaaaaagacgcaagaacgcgaaatagaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 28386031  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  28386032 tacggaaatagaccagtttccagccaaaaacccaaattttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 28386131  T
Q  205 catc 208  Q
    ||||    
T  28386132 catc 28386135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 9638696 - 9638877
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| |||  ||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||| |    
T  9638696 tgtgaaaaagacgcaagaacgcgaaatagggtatgatgtcactgtgcagctcgcgaggcgagtaagcttactcgctgtggcgagttgcgacagacaacac 9638795  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9638796 tacgggaacagaccaattttcagtcaaaaactcaatttttcatccacccaaaccccaaatttgataggaaacttaacctatg 9638877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 10694606 - 10694418
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacg 108  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||  |||||    
T  10694606 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgagtacgtttactcgctgtggcgagtggcgacggacaaatctacg 10694507  T
Q  109 ggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
     |||||||||| ||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10694506 agaacagaccaattttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 10694418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 15008655 - 15008847
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| || |||||||| ||||||||||||||||||||||||||||| ||| ||||  |    
T  15008655 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagatcgcgaggtgagtaagtttactcgctgtggcgagttgccacggacaaatc 15008754  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  15008755 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaattttataggaaactcaacctatgtttattctaca 15008847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 40620219 - 40620410
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||| |||||||||||||||||| |||||||||   ||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||  |    
T  40620219 tgtgaaaaagatgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgttgtggcgaggtgcgacggacaaatc 40620318  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctac 196  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  40620319 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgagaggaaactcaacctatgtttatcctac 40620410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 10908372 - 10908184
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacg 108  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||  |||||    
T  10908372 aaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgagtacgtttactcgctgtggcgagtggcgacggacaaatctacg 10908273  T
Q  109 ggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
     |||||||||| ||||||  |||||| ||| |  ||||||| |||||||   ||||||||||||||||||||||||||||||||||||||    
T  10908272 agaacagaccaattttcactccaaaagcccca-atttcatcaacccaaataacaaatttgataggaaactcaacctatgtttattctaca 10908184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 16277515 - 16277448
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  16277515 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 16277448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 53387125 - 53387058
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  53387125 ttttcatctacccaaaccccaaatttgataggaaacttaacctatgattattctaccacctgaacatc 53387058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 16296674 - 16296759
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| ||||  ||| ||| ||||||| |||||||||||||||||||| |||||||| |||||| |||| |||||||    
T  16296674 ttttcacccaaaaaaccaaaatttaatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaacctgaaca 16296759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 14549474 - 14549538
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  14549474 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 14549538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 19434887 - 19434823
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||| ||| |||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  19434887 tttcatctaccaaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 19434823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 35660712 - 35660776
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||||||| |||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  35660712 tttcatctacccaaatcccaaatttgataggaaacttaacatatgattattctacaacctgaaca 35660776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 9622330 - 9622374
Alignment:
Q  161 aaatttgataggaaactcaacctatgtttattctacaatctgaac 205  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  9622330 aaatttaaaaggaaactcaacctatgtttattctacaatctgaac 9622374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 18230565 - 18230632
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| || |||| |||||||||||||||||||| | |||||| |||| |||||| |||||||||    
T  18230565 ttttcatcaacacaaatcccaaatttgataggaaacttatcctatgattatcctacaacctgaacatc 18230632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 15344776 - 15344826
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  15344776 cccaaatttgttaggaaacttaacctatgattattctacaacctgaacatc 15344826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 14995768 - 14995804
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  14995768 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 14995804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 23802613 - 23802565
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  23802613 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 23802565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40229989 - 40230044
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    |||||||||||||||| |||||||  |||||||| ||||||||| ||||| |||||    
T  40229989 aacatgtgaaaaagacacaagaacatgaaacaggagatgctgtcactgtgcagctc 40230044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 44023967 - 44023916
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  44023967 tgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 44023916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44615913 - 44615968
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||||||  |||||||  ||||||||| ||||| |||||    
T  44615913 aacatgtgaaaaagacgcaagaacatgaaacagaagatgctgtcactgtgcagctc 44615968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 12611752 - 12611802
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  12611752 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatc 12611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 18247863 - 18247945
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgag 88  Q
    |||||||||||||||||||||||||||||  | |||||| ||| |  ||||||   ||||||||| ||||||||  |||||||    
T  18247863 gtgaaaaagacgcaagaacgcgaaacagggaaagctgtcactgggctgctcgcctcgcgagtaaggttactcgccatggcgag 18247945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 30147544 - 30147573
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacagg 34  Q
    ||||||||||||||||||||||||||||||    
T  30147544 tgtgaaaaagacgcaagaacgcgaaacagg 30147573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 15287844 - 15287800
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtg 50  Q
    |||||||||| |||||||||||||||||| | ||||||| |||||    
T  15287844 gtgaaaaagatgcaagaacgcgaaacagggggtgctgtcactgtg 15287800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 15447586 - 15447538
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  15447586 caaatttgttagcaaacttaacctatgattattctacaacctgaacatc 15447538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19566286 - 19566226
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgag 61  Q
    ||||||||||||||| ||||||||  |||||| | ||||||||| ||||| ||||| ||||    
T  19566286 aacatgtgaaaaagatgcaagaacatgaaacaagagatgctgtcactgtgcagctctcgag 19566226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 19697958 - 19697922
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  19697958 gtgaaaaagacgcaagaacacgaaacaggggatgctg 19697922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 19708543 - 19708507
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  19708543 gtgaaaaagacgcaagaacacgaaacaggggatgctg 19708507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 297044 - 297251
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  297044 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtcactgtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 297143  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  297144 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacctgaa 297243  T
Q  205 catcgatt 212  Q
    ||||||||    
T  297244 catcgatt 297251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 28313037 - 28313240
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||||||  |||||||| ||  | ||||||||||||||||||||||||||||||||||||||||| ||  ||||| |    
T  28313037 tgtgaaaaagacgcaagaacgcgaaacagggtatgctgtcactaggcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcaacagacaactc 28313136  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||| |||||    
T  28313137 tacgggaacagaccagtttctagccaaaaacgtaatttttcatccacccaaacctcaaatttgataggaaacttaacctatgattattccacaacctgaa 28313236  T
Q  205 catc 208  Q
    ||||    
T  28313237 catc 28313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 8276355 - 8276174
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||| ||||||||||  ||||||||  |||| ||||||||||||||||||||||| ||  |||||||||||||||   ||||| |    
T  8276355 tgtgaaaaagacgcaagaatgcgaaacagggtatgctgtcattgtgcagctcgcgaggcgagtaagtttaatcattgtggcgagttgcgagagacaactc 8276256  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  8276255 tacgggaacagaccagttttcagccaaaaacccaatttttcatccaccaaaactccaaatttgataggaaacttaacctatg 8276174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 29763997 - 29763805
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||  ||||||| ||||||||   |||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  |    
T  29763997 tgtgaaaaagttgcaagaatgcgaaacaaaggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggacaaatc 29763898  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29763897 tacgggaacagaccagttttcactccaaaagcccca-atttcatccacccaaatcccaaatttgataggaaactcaacttatgtttattctaca 29763805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 50001163 - 50001355
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||| ||||||||||||||||||||||||| |||| ||||   ||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||  |    
T  50001163 tgtgcaaaagacgcaagaacgcgaaacaggggatgttgtcaaagtgcagctcgcgaggcgagtaagtttactcgttgtggcgagttgcgacagacaaatc 50001262  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||    
T  50001263 tacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttgataggaaactcaacatatgtttattctaca 50001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 38056954 - 38056857
Alignment:
Q  88 gttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  38056954 gttgcgacagacaactctacgggaacagaccagttttcagccaaaaacccaatttttca-ccacccaaaccccaaatttgataggaaacttaacctatg 38056857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 46198032 - 46197918
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 181  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||    
T  46198032 ggcgagttgcgacggacaaatctacgggaacataccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaac 46197934  T
Q  182 ctatgtttattctaca 197  Q
    ||||||||||||||||    
T  46197933 ctatgtttattctaca 46197918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 34392552 - 34392646
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaat 199  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||  |||||||| ||||||||  | ||||||||||||||||||||||||||||||    
T  34392552 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caagcacccaaatcccaaattcaaaaggaaactcaacctatgtttattctacaat 34392646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 8306407 - 8306492
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| ||||  ||||||| ||||||| |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  8306407 ttttcacccaaaaaaccaaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattcaacaatctgaaca 8306492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 17902074 - 17901966
Alignment:
Q  99 caaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||| |||||||||||||||||||||||  ||||||| ||    ||||||| ||||||| |||||||||||||| |||||| ||||||| ||||||||||    
T  17902074 caactctacgggaacagaccagttttcactccaaaaagccccaatttcatcaacccaaatcccaaatttgatagaaaactctacctatgattattctaca 17901975  T
Q  198 atctgaaca 206  Q
    | |||||||    
T  17901974 acctgaaca 17901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 23194739 - 23194673
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  23194739 tttcatctacccaaactccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 23194673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 38057014 - 38056955
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcg 64  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||    
T  38057014 tgtgaaaaagacgcaagaacgcgaaacagggtatgctgtcactgtgcagctcgcgaggcg 38056955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 22130252 - 22130186
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| || ||||||    
T  22130252 tttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaaccttaacatc 22130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 24723709 - 24723624
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| || |  ||||||  ||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  24723709 ttttcacccaaaaaacccaaatttcatttacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 24723624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 45574230 - 45574180
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  45574230 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 45574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46198092 - 46198026
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagt 67  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||   ||| ||||||||||||||||    
T  46198092 aacatgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgtagctcgcgaggcgagt 46198026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 21239272 - 21239207
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||| ||||||| || ||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  21239272 ttttcatcaacccaaatcctaaatttgatagaaaactctacctatgattattctacaaactgaaca 21239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 6833990 - 6834054
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||| ||| |||||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  6833990 tttcatcaaccaaaatcccaaatttgatagaaaactctacctatgattattctacaacctgaaca 6834054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 7052241 - 7052177
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||| ||||| ||||| |||||||    
T  7052241 tttcatctacccaaatcccaaatatgataggaaacttaacctatgattattttacaacctgaaca 7052177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 9784702 - 9784653
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgc 58  Q
    |||||||||||||||||||||||||| |||| |||| ||||| |||||||    
T  9784702 aaaaagacgcaagaacgcgaaacaggggatgttgtcactgtgcagctcgc 9784653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 13880745 - 13880697
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  13880745 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 13880697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 17004033 - 17004069
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17004033 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 17004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 38055937 - 38055901
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38055937 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38055901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 18060560 - 18060527
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatg 39  Q
    ||||||||||||||||||||||||||||| ||||    
T  18060560 gtgaaaaagacgcaagaacgcgaaacaggggatg 18060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 29535680 - 29535709
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacagg 34  Q
    ||||||||||||||||||||||||||||||    
T  29535680 tgtgaaaaagacgcaagaacgcgaaacagg 29535709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 3652 - 3859
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3652 tgtgaaaaagacgcaagaacgtgaaacaggtgatgctgtcactgtgcagatcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaactc 3751  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  3752 tacgggaacagaccagttttcagccgaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcaacaacctgaa 3851  T
Q  205 catcgatt 212  Q
    ||||||||    
T  3852 catcgatt 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 8414112 - 8413909
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  8414112 tgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 8414013  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  8414012 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 8413913  T
Q  205 catc 208  Q
    ||||    
T  8413912 catc 8413909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 11775411 - 11775598
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||| |    
T  11775411 tgtgaaaaagacgcaagaacgcgaaataggggatgctgtcaaagtgcagctcgcgaggcgagtacgtttactcgctgtggcgagttgcgacagacaactc 11775510  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttatt 192  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  11775511 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattatt 11775598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 17795921 - 17796079
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  17795921 tgtgaaaaagacgctagaacgcgaaacaggtgatgctgtcactgtgcagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacatacaactc 17796020  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaa 163  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17796021 tacggaaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaa 17796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 25657883 - 25657676
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||   ||| | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  25657883 aacatgtgaaaaagacgcaagaacacgaaataggggatgctgtcaaagtgcatctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggaca 25657784  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    |   |||| |||||||||| ||||||  | |||| ||    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |    
T  25657783 aatttacgagaacagaccatttttcactctaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 25657684  T
Q  201 tgaacatc 208  Q
    ||||||||    
T  25657683 tgaacatc 25657676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 16198523 - 16198715
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| |  ||||||||||||||||| ||||||||||||||||||||| || ||||  |    
T  16198523 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcaaatcgcgaggcgagtaagtgtactcgctgtggcgagttgcggcggacaaatc 16198622  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||| |||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16198623 tacgggaatagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 16198715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 23478769 - 23478961
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| ||||||||| |||||||||||||||||| || ||||||||||||| ||||  |    
T  23478769 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaagcgagtaagtttactcgcagtagcgagttgcgacggacaaatc 23478868  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||| ||||||  || ||| ||| |  ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  23478869 tacgggaacagaccatttttcactcctaaagcccca-atttcatcaacccaaatcctaaatttgataggaaactcaacctatgtttattctaca 23478961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 19880517 - 19880702
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||  |    
T  19880517 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgaagctcgcgaggcgtgcaagtttactcgctgtggcgagttgcgacggacaaatc 19880616  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  |||||||       | ||||||||||||||||||||||||||||||||||||||||    
T  19880617 tacgggaacagaccagttttcactccaaaagcccca-atttcatc-------aacccaaatttgataggaaactcaacctatgtttattctaca 19880702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 14397269 - 14397082
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacg 108  Q
    ||||||| ||||||||||||||||||  ||||||||   ||| |||||||||||||||||||| |||||||||||||||||||||||  ||||  |||||    
T  14397269 aaaaagatgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacagacaaatctacg 14397170  T
Q  109 ggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||  |||||| ||| |  ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  14397169 ggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaa-tccaaatttgataggaaactcaacctatgtttattctaca 14397082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 19882706 - 19882839
Alignment:
Q  75 ctcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaa 174  Q
    |||||||||||||||||| ||  ||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19882706 ctcgctgtggcgagttgcaacagacaactctacgggaacggaccagtttccagccaaaaagccaatttttcatccacccaaaccccaaatttgataggaa 19882805  T
Q  175 actcaacctatgtttattctacaatctgaacatc 208  Q
    ||| |||||||| ||||||||||| |||||||||    
T  19882806 acttaacctatgattattctacaacctgaacatc 19882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 26454400 - 26454585
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||| |||||||||||||||||| |||||||||   ||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||  |    
T  26454400 tgtgaaaaagatgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagcaagtttactcgctgtggcgagttacgacggacaaatc 26454499  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||||||| |||||  |||||| ||| |  |||||||       | ||||||||||||||||||||||||||||||||||||||||    
T  26454500 tacgggaacagaccagatttcactccaaaagcccca-atttcatc-------aacccaaatttgataggaaactcaacctatgtttattctaca 26454585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 22610531 - 22610431
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||| | ||| |||||||||||||||||||||||| || ||||||||| || |||||  | ||||||||||||||||||||||||||||||||||    
T  22610531 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccacccaaatccaaaattcaaaaggaaactcaacctatgtttattctacaatctga 22610433  T
Q  204 ac 205  Q
    ||    
T  22610432 ac 22610431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 23883973 - 23884056
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 205  Q
    ||||||||||||||||||||||  || ||||||||| | ||||||  | ||||||||||||||||||||||||||||||||||||    
T  23883973 ttttcagccaaaaacccaatttg-caaccacccaaatcgcaaattcaaaaggaaactcaacctatgtttattctacaatctgaac 23884056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 24907463 - 24907516
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgc 58  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  24907463 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcactgtgcagctcgc 24907516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 36732733 - 36732649
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaac 205  Q
    |||||| ||||||| || |  |||| || ||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  36732733 ttttcacccaaaaaacccaaatttcgtctacccaaatcccaaatttgataggaaacttgacctatgattattctacaatctgaac 36732649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22483620 - 22483670
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  22483620 cccaaattcaataggaaactcaacctatgtttattctacaacctgaacatc 22483670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22474436 - 22474491
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  22474436 aacatgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 22474491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 25483652 - 25483602
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||||| ||||||||||| || ||||||    
T  25483652 cccaaatttgataggaaacttaacctatgattattctacaacctaaacatc 25483602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 643700 - 643736
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  643700 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 15319974 - 15319938
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15319974 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 15319938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 15500343 - 15500307
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15500343 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 15500307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 17978781 - 17978729
Alignment:
Q  4 atgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    |||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  17978781 atgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 17978729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 22147101 - 22147137
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  22147101 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 22147137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 23661140 - 23661188
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  23661140 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 23661188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 20455831 - 20455878
Alignment:
Q  161 aaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  20455831 aaatttgttaggaaacttaacctatgattattctacaacctgaacatc 20455878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 20460809 - 20460856
Alignment:
Q  161 aaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  20460809 aaatttgttaggaaacttaacctatgattattctacaacctgaacatc 20460856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 272149 - 272115
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgc 40  Q
    ||||||||||||||||||||||||||||| |||||    
T  272149 gtgaaaaagacgcaagaacgcgaaacaggagatgc 272115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 829506 - 829540
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgc 40  Q
    ||||||||||||||||||||||||||||| |||||    
T  829506 gtgaaaaagacgcaagaacgcgaaacaggagatgc 829540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 20517268 - 20517214
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatcgatt 212  Q
    |||||||||||||||||||   ||||||  ||||||||||| |||||||||||||    
T  20517268 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatt 20517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 12037384 - 12037336
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaa 198  Q
    ||||||| ||||||||||||||||  ||| ||||||| |||||||||||    
T  12037384 acccaaatcccaaatttgataggagtctctacctatgattattctacaa 12037336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 17460416 - 17460368
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| | ||||||| |||||||| ||||||||||| |||||||||    
T  17460416 caaatttgtttggaaacttaacctatgattattctacaacctgaacatc 17460368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 18612076 - 18612112
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  18612076 gtgaaaaagacgcaagaacacgaaacaggggatgctg 18612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 20463042 - 20463086
Alignment:
Q  164 tttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||| ||||||||| |||||||| ||||||||||| |||||||||    
T  20463042 tttgttaggaaacttaacctatgattattctacaacctgaacatc 20463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 22089358 - 22089322
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    |||||||||| |||||||||||||||||| |||||||    
T  22089358 gtgaaaaagatgcaagaacgcgaaacaggggatgctg 22089322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 146; Significance: 4e-77; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14953 - 14751
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||| |||  ||||||||||||| |||| ||||| |  |||||||||||||||||||||||| |||||||||||||||||||||    
T  14953 aacatgtgaaaaagacgcaataacctgaaacaggtgatgttgtcactgtgca--tcgcgaggcgagtaagtttactcgttgtggcgagttgcgacgaaca 14856  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14855 actctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacc 14756  T
Q  201 tgaac 205  Q
    |||||    
T  14755 tgaac 14751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24011 - 23809
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||| |||  ||||||||||||| |||| ||||| |  |||||||||||||||||||||||| |||||||||||||||||||||    
T  24011 aacatgtgaaaaagacgcaataacctgaaacaggtgatgttgtcactgtgca--tcgcgaggcgagtaagtttactcgttgtggcgagttgcgacgaaca 23914  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    || |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23913 actctacgggaacagacctattatcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaacc 23814  T
Q  201 tgaac 205  Q
    |||||    
T  23813 tgaac 23809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 52 - 212
Target Start/End: Complemental strand, 7327 - 7167
Alignment:
Q  52 agctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccac 151  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7327 agctcgcgaggcgagtaagtttactcgatgtggtgtgttgcgacgaacaactctacgggaacagaccagttttcagccaaaaacccaatttttcatccac 7228  T
Q  152 ccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatcgatt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  7227 ccaaaccccaaatttgataggaaactcaacctatgtttattctacagcctgaacatcgatt 7167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 133; Significance: 2e-69; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 169128 - 169328
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||| ||| ||| |||||||||   ||| || ||||||||||||||| |||||| ||||||||||||||||||  ||||| |    
T  169128 tgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgcaggtcgcgaggcgagtaaatttacttgctgtggcgagttgcgacagacaactc 169227  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  169228 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 169327  T
Q  205 c 205  Q
    |    
T  169328 c 169328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 176481 - 176681
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||| ||| ||| |||||||||   ||| || ||||||||||||||| |||||| ||||||||||||||||||  ||||| |    
T  176481 tgtgaaaaagacgcaagaacgcaaaataggggatgctgtcaaagtgcaggtcgcgaggcgagtaaatttacttgctgtggcgagttgcgacagacaactc 176580  T
Q  105 tacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  176581 tacgggaacagaccagtttccagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaacttaacctatgattattctacaacctgaa 176680  T
Q  205 c 205  Q
    |    
T  176681 c 176681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 19004 - 18826
Alignment:
Q  8 gaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccctac 107  Q
    |||||||||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||| |||||||||||||||| ||||| |||  ||||| ||||    
T  19004 gaaaaagacgcaagaacgcgaaacagggtatgttgtcactgtgcagctcgcgaggcgagtatgtttactcgctgtggctagttgtgacagacaactctac 18905  T
Q  108 gggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    | ||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||    
T  18904 gagaacagaccagttttcagccaaaaaccaaaattttcatccacccaaaccacaaatttgataggaaacttaacctatg 18826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 18282 - 18474
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||| | ||  |    
T  18282 tgtgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgaagctcgcgaggcgagtaagtgtactcgctgtggcgagttgcgacggaaaaatc 18381  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||| |||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18382 tacgggaacagatcagttttcactccaaaagcccca-ctttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctaca 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 1624 - 1816
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||| ||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||  |    
T  1624 tgtgaaaaagacgcaagaacgcaaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgtggcgagtggcgacggacaaatc 1723  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  1724 tacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatccaaaatttgataggaaactcaacctatgtttattctaca 1816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 102; Significance: 8e-51; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 10910 - 11102
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||| |||||||||||||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |    
T  10910 tgtgaaaaagatgcaagaacgcgaaacaggagatgctgtaaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacggacaaatc 11009  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||| ||||||  |||||| ||| |  ||||||| ||| ||| |||||||||||||||||||||||  |||||||||||||||    
T  11010 tacgggaacagaccaattttcactccaaaagcccca-atttcatcaaccaaaatcccaaatttgataggaaactcaagatatgtttattctaca 11102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 1094 - 1156
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||| ||||||| || ||||||||||||||||| ||  |||| ||||||||||| |||||    
T  1094 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaa 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 6600 - 6662
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    ||||||| ||||||| || ||||||||||||||||| ||  |||| ||||||||||| |||||    
T  6600 tttcatctacccaaatccaaaatttgataggaaacttaatatatgattattctacaacctgaa 6662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 13637 - 13816
Alignment:
Q  7 tgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaacccta 106  Q
    |||||||||||||||||||||||  |||  ||  |||| || || ||||||||||||||||||||||| ||| ||||| ||||||||||  |||||  ||    
T  13637 tgaaaaagacgcaagaacgcgaattagggtattgtgtcactatgcagctcgcgaggcgagtaagtttaatcgttgtggggagttgcgacagacaacttta 13736  T
Q  107 cgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatg 186  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13737 cgggaacagaccagttttcagcgaaaaaccttatttttcatccacccaaaccccaaatttgataggaaacttaacctatg 13816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 8887 - 8951
Alignment:
Q  80 tgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaattttt 144  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8887 tgtggcgacttgcgacaaacaactctacgggaacagaccagttttcagccaaaaacccaattttt 8951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 8647 - 8839
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||||| |||||||||   ||| |||||||||||||||||||||||||||||| | |||||||||||| ||||  |    
T  8647 tgtgaaaaagacgcaagaacgcgaaacaggggatgctgtcaaagtgcagctcgcgaggcgagtaagtttactcgctgggtcgagttgcgacggacaaatc 8746  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    || ||||||| |||||||||||  |||||| ||| |  ||||||| || |||| | ||||||||||||||||||||||||||||||||||||||    
T  8747 tatgggaacaaaccagttttcactccaaaagcccca-atttcatcaactcaaatctcaaatttgataggaaactcaacctatgtttattctaca 8839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 33800 - 33999
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||||||||||||||||||||||| | |||| ||||   ||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||  |    
T  33800 tgtgaaaaagacgcaagaacgcgaaacatgggatggtgtcaaagtgcagctcgcgcggcgagtaagtttactcgctgtggctagttgcgacggacaaatc 33899  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    || |||||||||||||||||||  |||||| ||| |  ||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||  |||||    
T  33900 tatgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatctcaaatttg-taggaaactcaacctatgtttattctacggtctga 33997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 20870 - 20976
Alignment:
Q  91 gcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgttt 189  Q
    |||||| ||||  |||||||||||||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20870 gcgacggacaaatctacgggaacagaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatgttt 20968  T
Q  190 attctaca 197  Q
    ||||||||    
T  20969 attctaca 20976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 4723 - 4913
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||| |||||||| |||||||||   ||| |||||||| |||||||||||||||||| |||||||||||| ||||   ||  |    
T  4723 tgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgttgtggcgagttgggacgggaaaatc 4822  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcta 195  Q
    |||||||||| |||||||||||  |||||| ||| |  ||||||| |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  4823 tacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 4723 - 4913
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||||||||||| |||||||| |||||||||   ||| |||||||| |||||||||||||||||| |||||||||||| ||||   ||  |    
T  4723 tgtgaaaaagacgcaagaacgtgaaacaggggatgctgtcaaagtgcagctcgcggggcgagtaagtttactcgttgtggcgagttgggacgggaaaatc 4822  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattcta 195  Q
    |||||||||| |||||||||||  |||||| ||| |  ||||||| |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  4823 tacgggaacataccagttttcactccaaaagcccca-atttcatcaaccctaattccaaatttgaaaggaaactcaacctatgtttattcta 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 6147 - 6268
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    |||||||| ||||||||||||||||| ||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |    
T  6147 tgtgaaaaggacgcaagaacgcgaaataggggatgctgtcaaagtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacagacaactc 6246  T
Q  105 tacgggaacagaccagttttca 126  Q
    ||||| || |||||||||||||    
T  6247 tacggaaatagaccagttttca 6268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 40060 - 39973
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||| ||||||| || |  ||||||| ||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  40060 ttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatc 39973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 31832 - 32023
Alignment:
Q  5 tgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaacaaccc 104  Q
    ||||||||||||| ||||||||||||||||  ||||||||   |||    ||||| ||||||||||| |||||||||||||||||||||||| ||||  |    
T  31832 tgtgaaaaagacgaaagaacgcgaaacagggaatgctgtcaaagtgccaatcgcggggcgagtaagtgtactcgctgtggcgagttgcgacggacaaatc 31931  T
Q  105 tacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||||||||||||| | ||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  31932 tacgggaacagaccaatattcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaacctatg-ttattctaca 32023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 22136 - 21939
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagtaagtttactcgctgtggcgagttgcgacgaaca 100  Q
    |||||||||||||||||||||||||||||||| | |||||||||   ||| ||||| |||||||||||||||||||| ||||||          || |||    
T  22136 aacatgtgaaaaagacgcaagaacgcgaaacatgggatgctgtcaaagtgcagctcacgaggcgagtaagtttactcactgtgg----------cggaca 22047  T
Q  101 accctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatc 200  Q
    |  |||||||||||  ||||||||||  |||||| ||    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |    
T  22046 aatctacgggaacatgccagttttcactcaaaaagccccaatttcatcaacccaaatcccaaatttgataggaaactcaacctatgtttattctacagcc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 29511 - 29389
Alignment:
Q  75 ctcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgatagga 173  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||    
T  29511 ctcgctgtggcgagttgcgacgaacaaatctacgggaacagaccagtttgcactccaaaagcccca-atttcatcaacccaaatcccaaatttgatagga 29413  T
Q  174 aactcaacctatgtttattctaca 197  Q
    ||||||||||||||||||||||||    
T  29412 aactcaacctatgtttattctaca 29389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 6821 - 6676
Alignment:
Q  54 ctcgcgaggcgagtaagttt-actcgctgtggcgagttgcgacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacc 152  Q
    |||||||||||||||||  | |||||| ||||||||    |||||||||| ||||| ||| | |||||||||||||||||||| |||||||||| |||||    
T  6821 ctcgcgaggcgagtaagggtcactcgccgtggcgagcgatgacgaacaactctacgagaagaaaccagttttcagccaaaaactcaatttttcaaccacc 6722  T
Q  153 caaaccccaaatttgataggaaactcaacctatgtttattctacaa 198  Q
    |||| |||||||||||||| |||||| || |||| ||| |||||||    
T  6721 caaatcccaaatttgatagaaaactctacttatgattactctacaa 6676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 8616 - 8729
Alignment:
Q  93 gacgaacaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttatt 192  Q
    |||||||| | ||||||||| | || |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||| ||| |    
T  8616 gacgaacagctctacgggaagaaactagttttcagccaaaaacccaatttttcaaccacccaaatcccaaatttgatagaaaactctacctatgattact 8715  T
Q  193 ctacaatctgaaca 206  Q
    || ||| |||||||    
T  8716 ctgcaacctgaaca 8729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 5881 - 5778
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||| | ||||||||||||||||||||| |||||| || ||||||||| ||||||||  || |||||||||||||||||||||||||||| ||||    
T  5881 ctacgggaagaaaccagttttcagccaaaaacctaatttt-caaccacccaaatcccaaattcaatgggaaactcaacctatgtttattctacaacctga 5783  T
Q  204 acatc 208  Q
    |||||    
T  5782 acatc 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 39361 - 39258
Alignment:
Q  104 ctacgggaacagaccagtttt-cagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctg 202  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||  |||||||| |||||||||||||| ||||||| |||    
T  39361 ctacgggaacagaccagtttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaattcaacctatgtttaatctacaacctg 39263  T
Q  203 aacat 207  Q
    |||||    
T  39262 aacat 39258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 44035 - 43949
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||  ||||||||||||||||||||||||||||||| || ||||||    
T  44035 ttttcagccaaaaacccaatttt-caaccacccaaatcccaaattcaataggaaactcaacctatgtttattctacaacctaaacatc 43949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 127610 - 127510
Alignment:
Q  104 ctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctga 203  Q
    ||||||||| | ||| |||||||||||||||||||||||| || ||||| ||| ||||||||  | |||||||||||||||||||||||||||||| |||    
T  127610 ctacgggaagaaacctgttttcagccaaaaacccaatttt-caaccaccaaaatcccaaattcaaaaggaaactcaacctatgtttattctacaatttga 127512  T
Q  204 ac 205  Q
    ||    
T  127511 ac 127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 70140 - 70026
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 181  Q
    |||||||||||||| ||||  |||||||||| ||||||||||||  |||||| ||| |  ||||||| ||||||| ||||||||||||||||||||||||    
T  70140 ggcgagttgcgacggacaaatctacgggaactgaccagttttcactccaaaagcccca-atttcatcaacccaaatcccaaatttgataggaaactcaac 70042  T
Q  182 ctatgtttattctaca 197  Q
    |||| ||| |||||||    
T  70041 ctattttttttctaca 70026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 72278 - 72328
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  72278 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatc 72328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 21925 - 22010
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| || |  ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  21925 ttttcacccaaaaaacccaaatttcatctacccaaatcccaaatttgataggaaacttaacctatgattattctacaacctgaaca 22010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 9899 - 9986
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||| ||||||| || |  ||||||| ||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||    
T  9899 ttttcacccaaaaaacccaaatttcatctacccaaatcccaattttgataggaaacttaacctatgattattctacaacctgaacatc 9986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 42438 - 42552
Alignment:
Q  83 ggcgagttgcgacgaacaaccctacgggaacagaccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaac 181  Q
    |||||||||||||| ||||  | |||||||||||||||||||||  |||||| ||| | ||| |||| | | |||  |||||||||||||||||||||||    
T  42438 ggcgagttgcgacggacaaatcaacgggaacagaccagttttcactccaaaagccccaattt-catcaaacaaaattccaaatttgataggaaactcaac 42536  T
Q  182 ctatgtttattctaca 197  Q
    ||| ||||||||||||    
T  42537 ctaggtttattctaca 42552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 42384 - 42444
Alignment:
Q  7 tgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgagt 67  Q
    ||||||||||||||||||||||||||||  ||||||||   ||| ||||||||||||||||    
T  42384 tgaaaaagacgcaagaacgcgaaacagggaatgctgtcaaagtgcagctcgcgaggcgagt 42444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 19564 - 19471
Alignment:
Q  104 ctacgggaacagaccagttttcag-ccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||||||||||||||||||||||  |||||| ||| | ||| |||| || || | |||||||||||||||||||||||| |||||||||||||||    
T  19564 ctacgggaacagaccagttttcactccaaaagccccaattt-catcaactcatatcccaaatttgataggaaactcaacttatgtttattctaca 19471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 19621 - 19583
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtc 44  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  19621 gtgaaaaagacgcaagaacgcgaaacagggaatgctgtc 19583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 964 - 1031
Alignment:
Q  141 ttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||| | ||||||| |||||||||||||||||||| |||||||| |||| |||||| |||||||||    
T  964 ttttcaccaacccaaatcccaaatttgataggaaacttaacctatgattatcctacaacctgaacatc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 35319 - 35382
Alignment:
Q  145 catccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||| ||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  35319 catcaacctaaatcccaaattcaataggaaactcaacctatgtttattctacaacctgaacatc 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 8005 - 8055
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  8005 cccaaatttgataggaaacttaacctatgattattctacaacctgaacatc 8055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 2617 - 2702
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||| ||||||| || |  ||||||| || |||| |||||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  2617 ttttcacccaaaaaacccaaatttcatctactcaaatcccaaatttgataggaaacttaacgtatgattattcaacaatctgaaca 2702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 66349 - 66243
Alignment:
Q  99 caaccctacgggaacagaccagttttca-gccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    |||| ||||| |||||||||||||||||  |||||| ||| |  ||||||| || |||| ||||||||||||| ||||||| ||||||| ||||||||||    
T  66349 caactctacgagaacagaccagttttcactccaaaatcccca-atttcatcaactcaaatcccaaatttgata-gaaactctacctatgattattctaca 66252  T
Q  198 atctgaaca 206  Q
    | |||||||    
T  66251 acctgaaca 66243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 1929 - 2016
Alignment:
Q  121 ttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||| ||||||| || |  ||||||  ||||||| |||||||||||||||||||| |||||| | ||||||||||| || ||||||    
T  1929 ttttcatccaaaaaacccaaatttcatatacccaaatcccaaatttgataggaaacttaacctacgattattctacaacctaaacatc 2016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18038 - 17983
Alignment:
Q  1 aacatgtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  18038 aacatgtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 17983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 9009 - 8959
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||  ||||||||||||||||| ||||||||||||| |||||||||    
T  9009 cccaaattcaataggaaactcaacctaagtttattctacaacctgaacatc 8959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 21817 - 21875
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||    
T  21817 acccaaatcccaaatttgataggaagcttaatctatgattattctacaacctgaacatc 21875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 35706 - 35652
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaa 204  Q
    |||||||  ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  35706 acccaaattccaaatttgataggaaactaaacctatgattattctacaacctgaa 35652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 8932 - 8982
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  8932 cccaaatttgataggaaacttaacatatgattattctacaacctgaacatc 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 174335 - 174269
Alignment:
Q  142 tttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||| ||||||| | |||||||||||||||||| ||| |||| ||||||||||| |||| ||||    
T  174335 tttcatctacccaaatctcaaatttgataggaaacttaacatatgattattctacaacctgaccatc 174269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 2305 - 2256
Alignment:
Q  159 ccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  2305 ccaaatttgataggaaacttaacctgtgattattctacaacctgaacatc 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 27274 - 27217
Alignment:
Q  9 aaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgag 66  Q
    |||||||||||||||||| ||||||| |||||||||  |||| |||| ||||||||||    
T  27274 aaaaagacgcaagaacgcaaaacaggggatgctgtcattgtgcagcttgcgaggcgag 27217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 9833 - 9777
Alignment:
Q  10 aaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctcgcgaggcgag 66  Q
    |||||| |||||||||||||||||| |||||||||  |||| ||||||| |||||||    
T  9833 aaaagatgcaagaacgcgaaacaggggatgctgtcaatgtgcagctcgcaaggcgag 9777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 2236 - 2188
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  2236 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 916 - 964
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  916 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 964  T

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Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 21372 - 21428
Alignment:
Q  150 acccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    ||||||| |||||||||||||| ||||| || ||||| ||||||||||| |||||||    
T  21372 acccaaatcccaaatttgatagaaaacttaaactatgattattctacaacctgaaca 21428  T

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Target: scaffold0125 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 1259 - 1211
Alignment:
Q  160 caaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  1259 caaatttgttaggaaacttaacctatgattattctacaacctgaacatc 1211  T

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Target: scaffold0125; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 28364 - 28442
Alignment:
Q  130 aaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    ||||||||||  | ||||| ||||||| ||| ||||| |||| ||||||  |||||||||||||||||| |||| ||||    
T  28364 aaaaacccaaaatctcatctacccaaatccctaattttatagaaaactcttcctatgtttattctacaacctgaccatc 28442  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 30594 - 30630
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30594 gtgaaaaagacgcaagaacgcgaaacaggggatgctg 30630  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 38499 - 38535
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38499 gtgaaaaagacgcaagaacgcgaaacaggagatgctg 38535  T

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Target: scaffold1439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 917 - 967
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||| ||| ||||| |||||||| ||||||||||| |||||||||    
T  917 cccaaatttgttagaaaacttaacctatgattattctacaacctgaacatc 967  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 12081 - 12131
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatc 208  Q
    |||||||||||||||||||   ||||||| ||||||||||| |||||||||    
T  12081 cccaaatttgataggaaacatcacctatgattattctacaacctgaacatc 12131  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 28495 - 28604
Alignment:
Q  98 acaaccctacgggaacagaccagttttcagccaaaaacccaatttttcatccacccaaaccccaaatttgataggaaactcaacctatgtttattctaca 197  Q
    ||||| ||||||||| | |||||||||||  ||||||||| |  ||||| | ||||||| ||||||||||| |||||||   || |||  ||||||||||    
T  28495 acaactctacgggaagaaaccagttttcacacaaaaacccca-atttcaactacccaaatcccaaatttgacaggaaacattacgtattattattctaca 28593  T
Q  198 atctgaacatc 208  Q
    | |||||||||    
T  28594 acctgaacatc 28604  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 10291 - 10241
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctgtctctgtgaagctc 56  Q
    |||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  10291 gtgaaaaagacgcaagaacatgaaacaggagatgctgtcactgtgcagctc 10241  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 19072 - 19018
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaacatcgatt 212  Q
    |||||||||||||||||||   ||||||  ||||||||||| |||||||||||||    
T  19072 cccaaatttgataggaaacatcacctattgttattctacaacctgaacatcgatt 19018  T

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Target: scaffold0594 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 2075 - 2128
Alignment:
Q  153 caaaccccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||| |||||||||||||| ||| || ||||||| ||||||||||| |||||||    
T  2075 caaatcccaaatttgatagaaaaatctacctatgattattctacaacctgaaca 2128  T

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Target: scaffold0315 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 18329 - 18365
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  18329 gtgaaaaagacgcaagaacgcgaaataggggatgctg 18365  T

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Target: scaffold0213 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 28593 - 28629
Alignment:
Q  6 gtgaaaaagacgcaagaacgcgaaacaggtgatgctg 42  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  28593 gtgaaaaggacgcaagaacgcgaaacaggggatgctg 28629  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 106373 - 106325
Alignment:
Q  158 cccaaatttgataggaaactcaacctatgtttattctacaatctgaaca 206  Q
    |||||||||||||||||||| |||||| | ||||| ||||| |||||||    
T  106373 cccaaatttgataggaaacttaacctacgattattttacaacctgaaca 106325  T

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