View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_725 (Length: 211)

Name: NF10145A_low_725
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_725
NF10145A_low_725
[»] chr6 (11 HSPs)
chr6 (18-192)||(16787665-16787839)
chr6 (18-192)||(16796867-16797041)
chr6 (18-192)||(16987152-16987326)
chr6 (18-191)||(16780798-16780971)
chr6 (13-189)||(16657713-16657889)
chr6 (13-192)||(17069204-17069383)
chr6 (13-172)||(16868284-16868443)
chr6 (18-180)||(18806485-18806647)
chr6 (18-180)||(18873479-18873641)
chr6 (130-180)||(18870507-18870557)
chr6 (112-180)||(16843516-16843584)
[»] scaffold0133 (3 HSPs)
scaffold0133 (18-191)||(12548-12721)
scaffold0133 (18-192)||(8205-8379)
scaffold0133 (18-190)||(17755-17927)
[»] chr3 (2 HSPs)
chr3 (18-191)||(38939648-38939821)
chr3 (18-167)||(7053555-7053704)
[»] scaffold0256 (1 HSPs)
scaffold0256 (39-191)||(8850-9002)
[»] chr8 (1 HSPs)
chr8 (18-190)||(13377791-13377963)
[»] scaffold0144 (1 HSPs)
scaffold0144 (13-191)||(37189-37367)
[»] scaffold0511 (1 HSPs)
scaffold0511 (18-180)||(9063-9225)
[»] scaffold0230 (1 HSPs)
scaffold0230 (18-180)||(4382-4544)


Alignment Details
Target: chr6 (Bit Score: 171; Significance: 5e-92; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 16787839 - 16787665
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16787839 acatcaatggatttctgtactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 16787740  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16787739 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 16787665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 16797041 - 16796867
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||||||||| ||||||||||||| |||||||||||| || ||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  16797041 acatcaatggatttctgtactggaaagtgaattttggaatttacctcaggttgatcgtatcatgtctgctttgacactaagctactttaacttgaaattg 16796942  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 192  Q
    || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16796941 tcattgaggccatgttttactttctgcgctgtttttcctaaggattttgaaatggtgaaggaacatctcattcat 16796867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 16987326 - 16987152
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||    
T  16987326 acatcaatggatttctgtactggaaagtgagatttggaatttacctgaggatgatcctatcatttctgctttgagactaagctacttcaacatgaaattg 16987227  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 192  Q
    ||  | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16987226 tcactaaggccatgttttaccttctgtgctgtttttcctaaggattttgaaatggtgaaggaagatctcattcat 16987152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 16780971 - 16780798
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  |||||||||| ||||||| ||| |||||||| | ||||||||||||| ||||||||||||||||||||| ||||| |||    
T  16780971 acatcaatggctttctgtaaaggaaagtgagctttggaagttatctgaggataaccctatcatgtctgctttgagactaagctactttaatttgaatttg 16780872  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattca 191  Q
    ||||| ||||| |||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16780871 tccttaaggccgtgttttactttttgtgctgtttttcctaaggattttgaaatggtgaaggaaaatctcattca 16780798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 16657889 - 16657713
Alignment:
Q  13 gatggacatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttga 112  Q
    |||| |||||||||||||||| |  ||||||||||||||||||||||| |||| ||| | | | ||||||||| ||||||||| ||||||||||||||||    
T  16657889 gatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagactgagctactttaacttga 16657790  T
Q  113 aattgtccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcatt 189  Q
    ||||||| ||||||||||||||||| || || ||||||||||| ||||||||||||||||  |||||| | ||||||    
T  16657789 aattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattttgaaatggataaggaagaactcatt 16657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 17069383 - 17069204
Alignment:
Q  13 gatggacatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttga 112  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||||   || ||  | ||| ||||||||| ||||||||||||||||| ||||||||    
T  17069383 gatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagacgatgagaaccctgtcatgtctgctttgagactaagctactataacttga 17069284  T
Q  113 aattgtccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 192  Q
    ||||||| ||||||||||||||||| ||||| | ||||||||| |||||||||| ||||||||||||||  |||||||||    
T  17069283 aattgtcattgaggccatgttttactttctgtgttgtttttcctaaggattttgtaatggtgaaggaaaggctcattcat 17069204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 16868284 - 16868443
Alignment:
Q  13 gatggacatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttga 112  Q
    |||| ||||||||||| |||| |  ||||||||||||||||||||||| | || ||| | | | ||||||||| ||||||||| ||||||||||||||||    
T  16868284 gatgaacatcaatggacttctgtggtggaaagtgagttttggaatttagcagatgataaccatgtcatgtctgctttgagactgagctactttaacttga 16868383  T
Q  113 aattgtccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatgg 172  Q
    ||||||| ||||||||||||||||| || || ||||||||||| ||||||||||||||||    
T  16868384 aattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattttgaaatgg 16868443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 18806485 - 18806647
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  ||||||| |||||||||  ||| | |||||  ||||||||||||||||||||||||| ||||||||||| ||||||||     
T  18806485 acatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtctgttttgagactcagctactttaatttgaaatta 18806584  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||  ||||||  |||||||| || || || |||||||| ||||||||||||||||||||||||    
T  18806585 tcactgaggctgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaa 18806647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 18873479 - 18873641
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  ||||||| |||||||||  ||| | |||||  |||||||||||||||| |||||||| ||||||||||| ||||||||     
T  18873479 acatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtctgtattgagactcagctactttaatttgaaatta 18873578  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||  ||||||  |||||||| || || || |||||||| ||||||||||||||||||||||||    
T  18873579 tcactgaggctgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaa 18873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 18870507 - 18870557
Alignment:
Q  130 tgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||||||||||| || |  |||||||| ||||||||||||||||||||||||    
T  18870507 tgttttaccttttgtgaggtttttcctaaggattttgaaatggtgaaggaa 18870557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 16843584 - 16843516
Alignment:
Q  112 aaattgtccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||||| || |||| |||||||||||| || || ||||| ||||| || ||||||| |||||||||||||    
T  16843584 aaattatcattgaagccatgttttacattttgtgctgtatttcctaaagattttgtaatggtgaaggaa 16843516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 126; Significance: 4e-65; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 12721 - 12548
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||||||||| |||| |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12721 acatcaatggatttctgtactagaaagtgagttttggagtttacctgaggttgatcctatcatgtctgctttgagactaagctattttaacttgaaattg 12622  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattca 191  Q
    || ||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  12621 tcattgaggccatgttttactttctgtgctgtttttcccaaagattatgaaatggtgaaggaaaatctcattca 12548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 8379 - 8205
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||||||||| ||||||||||||| |||||||||||  |||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  8379 acatcaatggatttctgtactggaaagtgaattttggaatttgcctgaggttgattctatcatgtctgctttgagaataagctactttaacttgaaattg 8280  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcat 192  Q
    || ||||| ||||||||| | ||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  8279 tcattgagaccatgttttgctttctgtgctgtttttcctaagggttttgaaatggttaaggaaaatctcattcat 8205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 17927 - 17755
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  |||||||||| ||||||||||| |||||||| | ||||| ||||||| ||||||||||||||||||||| ||||||| |    
T  17927 acatcaatggctttctgtaaaggaaagtgaggtttggaatttatctgaggataaccctataatgtctgctttgagactaagctactttaatttgaaatcg 17828  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattc 190  Q
    ||||||||||| |||||||| || ||  |||||||||| ||||||||||||||||||||||||||| ||||||    
T  17827 tccttgaggccctgttttactttttgtactgtttttcctaaggattttgaaatggtgaaggaaaatatcattc 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 38939648 - 38939821
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  |||||||||| ||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  38939648 acatcaatggttttctgtaaaggaaagtgagctttggaatttatctgaggataaccctatcatgtctgctttgagactaagctactttaatttgaaattg 38939747  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattca 191  Q
    |||||||||||||||||||  || || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  38939748 tccttgaggccatgttttaatttttgtgctgtttttcctaaggattttgaaatggtgaaggaaaatctcattca 38939821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 7053555 - 7053704
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||||||  ||||||  |||||||||||||| |||||||| |||| |||||||||| |||||| || ||||||| ||| |||||||||    
T  7053555 acatcaatggctttctataaaggaaagcaagttttggaatttatctgaggataatccaatcatgtctgctttgaggctgagctactataatttgaaattg 7053654  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttga 167  Q
     | |||||||| |||||| | || || |||||||||||||| ||||||||    
T  7053655 ccattgaggccttgtttttctttttgtgctgtttttcccaaagattttga 7053704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 191
Target Start/End: Complemental strand, 9002 - 8850
Alignment:
Q  39 ggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattgtccttgaggccatgttttacc 138  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||     
T  9002 ggaaagtgagctttggaatttaactgaggatgatcctatcatgtctgctttgagactaagctactttaatttgaaattgtccttgagaccatgttttact 8903  T
Q  139 ttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattca 191  Q
    || || ||||||||||| || |||||| |||||||||||||||||||||||||    
T  8902 ttttgtgctgtttttcctaaagattttaaaatggtgaaggaaaatctcattca 8850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 13377963 - 13377791
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  ||||||| || ||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  13377963 acatcaatggctttctgtaaaggaaagtaagctttggaatttatctgaggataaccctatcatgtctgctttgagactaagctactttaatttgaaattg 13377864  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattc 190  Q
    |||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13377863 tccttgaggccatgttttactttttgtgctgtttttcctaaggattttgaaatggtgaaggaaaatctcattc 13377791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 37367 - 37189
Alignment:
Q  13 gatggacatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttga 112  Q
    |||| |||||||||||||||| |  ||||||||||||||||||||||| |||| ||| | |   ||||||||| ||||||||| ||||||||||||||||    
T  37367 gatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccaagtcatgtctgctttgagactgagctactttaacttga 37268  T
Q  113 aattgtccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattca 191  Q
    ||||||| ||||||||||||||||| || || ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  37267 aattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattttaaaatggtgaaggaaaatctcattca 37189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 9225 - 9063
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  ||| ||| |||||||||  ||| | |||||  ||||||||||||||||||||||||| ||||||||||| ||||||||     
T  9225 acatcaatggctttctgtaaaggacagtaagttttggagcttatccgaggacaatcctatcatgtctgttttgagactcagctactttaatttgaaatta 9126  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||  ||||||| |||||||| || || || |||||||| ||||||||||||||||||||||||    
T  9125 tcactgaggccgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaa 9063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 4544 - 4382
Alignment:
Q  18 acatcaatggatttctatactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattg 117  Q
    |||||||||| ||||| ||  ||||||| |||||||||  ||| | |||||  |||||||||||| |||||||||||| ||||||||||| || |||||     
T  4544 acatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtttgttttgagactcagctactttaatttaaaatta 4445  T
Q  118 tccttgaggccatgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaa 180  Q
    ||  ||||||| |||||||| || || || |||||||| ||||||||||||||||||||||||    
T  4444 tcactgaggccgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaa 4382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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