View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_756 (Length: 205)

Name: NF10145A_low_756
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_756
NF10145A_low_756
[»] chr5 (38 HSPs)
chr5 (13-193)||(10298553-10298733)
chr5 (130-193)||(10290270-10290333)
chr5 (14-87)||(21351906-21351979)
chr5 (15-99)||(31084309-31084393)
chr5 (1-128)||(8419999-8420121)
chr5 (22-87)||(42893353-42893418)
chr5 (16-87)||(6247609-6247680)
chr5 (13-87)||(21191057-21191131)
chr5 (13-82)||(14674253-14674322)
chr5 (24-81)||(15405062-15405119)
chr5 (130-186)||(9747055-9747111)
chr5 (13-116)||(13287366-13287474)
chr5 (13-81)||(39698525-39698593)
chr5 (15-73)||(41995457-41995515)
chr5 (30-87)||(21576746-21576803)
chr5 (22-87)||(33178018-33178083)
chr5 (22-94)||(41633728-41633800)
chr5 (24-98)||(5894823-5894897)
chr5 (13-87)||(21522734-21522808)
chr5 (13-87)||(21533300-21533374)
chr5 (22-87)||(30135306-30135372)
chr5 (26-87)||(7677702-7677763)
chr5 (2-71)||(17925189-17925258)
chr5 (27-87)||(21542028-21542088)
chr5 (93-128)||(3966597-3966632)
chr5 (1-87)||(3966475-3966561)
chr5 (13-80)||(4105241-4105310)
chr5 (28-82)||(12159951-12160005)
chr5 (24-62)||(18316951-18316989)
chr5 (13-87)||(19579685-19579759)
chr5 (16-82)||(24906307-24906373)
chr5 (13-87)||(37328845-37328919)
chr5 (13-82)||(17177029-17177098)
chr5 (4-73)||(30098301-30098370)
chr5 (13-61)||(6770527-6770575)
chr5 (13-61)||(19552570-19552618)
chr5 (27-87)||(30183547-30183607)
chr5 (36-80)||(43001807-43001851)
[»] chr7 (35 HSPs)
chr7 (2-94)||(9408328-9408420)
chr7 (23-128)||(3991318-3991431)
chr7 (16-81)||(35861951-35862016)
chr7 (13-87)||(11061077-11061151)
chr7 (13-87)||(18215187-18215261)
chr7 (13-98)||(13770675-13770760)
chr7 (22-87)||(24339635-24339700)
chr7 (27-87)||(7438704-7438764)
chr7 (22-80)||(25481895-25481953)
chr7 (13-87)||(27945025-27945099)
chr7 (14-99)||(5409825-5409910)
chr7 (22-79)||(8234139-8234196)
chr7 (1-98)||(9778469-9778569)
chr7 (16-99)||(32094009-32094093)
chr7 (16-87)||(33994199-33994270)
chr7 (29-87)||(11665441-11665499)
chr7 (36-82)||(26033467-26033513)
chr7 (13-87)||(43027470-43027544)
chr7 (22-87)||(7197298-7197363)
chr7 (5-78)||(11831409-11831481)
chr7 (13-82)||(24105662-24105731)
chr7 (15-87)||(6630913-6630985)
chr7 (22-94)||(25822648-25822720)
chr7 (93-128)||(1433542-1433577)
chr7 (27-87)||(11272587-11272649)
chr7 (95-130)||(18035804-18035839)
chr7 (15-61)||(29763201-29763247)
chr7 (13-83)||(43249977-43250047)
chr7 (15-60)||(21826259-21826304)
chr7 (32-80)||(7058429-7058477)
chr7 (13-61)||(10042921-10042969)
chr7 (15-94)||(21560484-21560568)
chr7 (13-73)||(29787384-29787444)
chr7 (22-82)||(40287363-40287422)
chr7 (43-87)||(48438560-48438604)
[»] chr1 (47 HSPs)
chr1 (7-81)||(32434723-32434798)
chr1 (1-87)||(37598804-37598889)
chr1 (15-87)||(22881617-22881689)
chr1 (1-87)||(38078662-38078754)
chr1 (4-87)||(31672896-31672979)
chr1 (24-87)||(40258934-40258997)
chr1 (13-87)||(1704993-1705067)
chr1 (29-87)||(24577187-24577245)
chr1 (13-128)||(48450551-48450662)
chr1 (29-93)||(28273083-28273147)
chr1 (13-88)||(1815241-1815316)
chr1 (22-80)||(113292-113350)
chr1 (29-99)||(1486698-1486768)
chr1 (22-80)||(32461471-32461529)
chr1 (13-87)||(42359450-42359524)
chr1 (13-87)||(46348384-46348458)
chr1 (13-78)||(18556466-18556531)
chr1 (22-82)||(21378571-21378631)
chr1 (1-128)||(24334665-24334793)
chr1 (15-87)||(47989484-47989555)
chr1 (24-87)||(6332666-6332728)
chr1 (29-87)||(18190109-18190167)
chr1 (29-87)||(22515888-22515946)
chr1 (38-87)||(18337338-18337387)
chr1 (13-94)||(38503304-38503385)
chr1 (27-87)||(51410022-51410083)
chr1 (13-73)||(398780-398840)
chr1 (30-82)||(31015044-31015096)
chr1 (13-73)||(34298420-34298480)
chr1 (27-81)||(6427459-6427516)
chr1 (93-128)||(9828138-9828173)
chr1 (22-81)||(14359529-14359587)
chr1 (93-128)||(22881568-22881603)
chr1 (15-82)||(30359374-30359441)
chr1 (15-73)||(2288182-2288240)
chr1 (13-87)||(5376501-5376575)
chr1 (37-87)||(6612172-6612222)
chr1 (36-81)||(5927347-5927392)
chr1 (3-72)||(9828019-9828087)
chr1 (22-87)||(19058857-19058922)
chr1 (32-80)||(2283669-2283717)
chr1 (13-73)||(6427334-6427394)
chr1 (13-61)||(9103624-9103672)
chr1 (13-61)||(16812527-16812575)
chr1 (29-87)||(17778549-17778604)
chr1 (1-99)||(35919265-35919369)
chr1 (15-87)||(36878447-36878519)
[»] chr6 (34 HSPs)
chr6 (1-87)||(7801157-7801243)
chr6 (13-128)||(426479-426589)
chr6 (16-82)||(1681745-1681811)
chr6 (22-128)||(2117069-2117174)
chr6 (13-87)||(9107371-9107445)
chr6 (13-87)||(15489733-15489807)
chr6 (13-87)||(34595118-34595192)
chr6 (14-87)||(10770675-10770748)
chr6 (14-87)||(16766682-16766755)
chr6 (13-80)||(8776981-8777048)
chr6 (15-82)||(16833294-16833361)
chr6 (13-87)||(8365520-8365594)
chr6 (13-99)||(12696308-12696394)
chr6 (16-87)||(17302543-17302615)
chr6 (14-128)||(7938101-7938218)
chr6 (13-79)||(17841598-17841664)
chr6 (13-87)||(28152083-28152156)
chr6 (16-82)||(31959146-31959212)
chr6 (22-87)||(853860-853925)
chr6 (22-87)||(7977831-7977896)
chr6 (32-81)||(31384923-31384972)
chr6 (27-82)||(1191706-1191761)
chr6 (22-87)||(4877935-4878001)
chr6 (1-87)||(28715264-28715353)
chr6 (37-80)||(4118341-4118384)
chr6 (1-87)||(7027213-7027300)
chr6 (13-87)||(3398603-3398676)
chr6 (13-87)||(7930289-7930363)
chr6 (36-82)||(9522898-9522944)
chr6 (22-87)||(33001290-33001355)
chr6 (24-73)||(34225824-34225873)
chr6 (28-76)||(5970120-5970168)
chr6 (29-73)||(24115862-24115906)
chr6 (22-82)||(30866150-30866210)
[»] chr4 (41 HSPs)
chr4 (13-128)||(30298930-30299047)
chr4 (13-128)||(30327798-30327915)
chr4 (22-99)||(12895105-12895182)
chr4 (28-87)||(24613702-24613761)
chr4 (2-80)||(11596360-11596438)
chr4 (13-87)||(12797339-12797412)
chr4 (13-87)||(23292987-23293061)
chr4 (5-82)||(24543957-24544035)
chr4 (29-87)||(54580024-54580082)
chr4 (15-80)||(19482654-19482719)
chr4 (15-80)||(40481623-40481687)
chr4 (27-99)||(3947755-3947827)
chr4 (27-87)||(21945501-21945561)
chr4 (19-80)||(715615-715677)
chr4 (19-80)||(752941-753003)
chr4 (15-81)||(14126118-14126184)
chr4 (36-82)||(29205451-29205497)
chr4 (13-87)||(35157986-35158060)
chr4 (22-87)||(2361976-2362041)
chr4 (30-75)||(14465088-14465133)
chr4 (36-81)||(28964255-28964300)
chr4 (13-81)||(4383352-4383419)
chr4 (2-62)||(11110708-11110768)
chr4 (7-87)||(16073373-16073452)
chr4 (13-83)||(20633469-20633536)
chr4 (22-81)||(28084514-28084574)
chr4 (22-82)||(31800484-31800544)
chr4 (27-87)||(34306805-34306864)
chr4 (24-87)||(4157145-4157207)
chr4 (22-81)||(38847019-38847078)
chr4 (13-87)||(49431009-49431084)
chr4 (14-80)||(27706185-27706251)
chr4 (37-82)||(6485617-6485662)
chr4 (22-87)||(12895275-12895340)
chr4 (1-80)||(37203239-37203315)
chr4 (92-128)||(4383448-4383484)
chr4 (96-128)||(12884348-12884380)
chr4 (91-119)||(17210041-17210069)
chr4 (1-61)||(32273553-32273612)
chr4 (13-73)||(36635308-36635368)
chr4 (24-80)||(51701253-51701309)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-88)||(17749-17835)
[»] chr2 (31 HSPs)
chr2 (13-128)||(19536362-19536473)
chr2 (13-87)||(37558961-37559035)
chr2 (13-128)||(20539633-20539749)
chr2 (13-81)||(21374706-21374774)
chr2 (13-87)||(15657848-15657922)
chr2 (13-87)||(30717531-30717605)
chr2 (13-87)||(15972857-15972931)
chr2 (13-87)||(18421947-18422021)
chr2 (13-87)||(30335401-30335475)
chr2 (13-82)||(6940239-6940308)
chr2 (14-87)||(18841014-18841087)
chr2 (13-82)||(23718010-23718079)
chr2 (13-82)||(24105682-24105751)
chr2 (13-82)||(30404856-30404925)
chr2 (27-87)||(20473320-20473380)
chr2 (28-87)||(974746-974805)
chr2 (29-87)||(2438720-2438778)
chr2 (5-79)||(37419719-37419793)
chr2 (22-87)||(12668424-12668489)
chr2 (29-82)||(12940941-12940994)
chr2 (15-80)||(38117167-38117232)
chr2 (15-87)||(36756345-36756417)
chr2 (27-87)||(5040730-5040792)
chr2 (13-87)||(23058443-23058518)
chr2 (1-87)||(26769478-26769569)
chr2 (29-87)||(11223864-11223922)
chr2 (13-98)||(14996213-14996299)
chr2 (15-80)||(29176501-29176566)
chr2 (36-129)||(34691769-34691857)
chr2 (36-129)||(34714181-34714269)
chr2 (13-81)||(21091707-21091775)
[»] chr8 (38 HSPs)
chr8 (13-87)||(22651960-22652034)
chr8 (8-79)||(30271300-30271371)
chr8 (13-80)||(36450762-36450829)
chr8 (13-87)||(15816130-15816204)
chr8 (18-87)||(4298887-4298956)
chr8 (24-87)||(25566836-25566899)
chr8 (28-87)||(29447111-29447170)
chr8 (13-87)||(18170483-18170557)
chr8 (13-87)||(18634051-18634125)
chr8 (15-81)||(22197749-22197815)
chr8 (17-87)||(24613509-24613578)
chr8 (34-87)||(4948657-4948710)
chr8 (14-87)||(13436965-13437038)
chr8 (13-82)||(25192353-25192422)
chr8 (13-82)||(29510310-29510379)
chr8 (28-87)||(2572057-2572116)
chr8 (24-87)||(8342967-8343030)
chr8 (22-81)||(8343309-8343368)
chr8 (13-87)||(5813576-5813650)
chr8 (13-87)||(20873053-20873127)
chr8 (5-80)||(21465391-21465463)
chr8 (16-80)||(22595981-22596045)
chr8 (27-83)||(41831945-41832001)
chr8 (93-128)||(17751739-17751774)
chr8 (93-128)||(17760726-17760761)
chr8 (27-82)||(18407717-18407772)
chr8 (93-128)||(22652070-22652105)
chr8 (36-87)||(28745505-28745556)
chr8 (17-87)||(31556985-31557054)
chr8 (95-128)||(11803355-11803388)
chr8 (36-81)||(30077394-30077439)
chr8 (28-80)||(17468516-17468568)
chr8 (13-57)||(24196628-24196672)
chr8 (22-82)||(31236583-31236643)
chr8 (36-128)||(34897092-34897179)
chr8 (13-73)||(36934654-36934714)
chr8 (38-82)||(40332200-40332244)
chr8 (15-83)||(44067502-44067570)
[»] chr3 (45 HSPs)
chr3 (5-94)||(34910294-34910382)
chr3 (16-87)||(10954939-10955010)
chr3 (36-127)||(25948848-25948939)
chr3 (13-87)||(10335287-10335361)
chr3 (13-87)||(55401059-55401133)
chr3 (16-80)||(4987299-4987363)
chr3 (22-81)||(14209106-14209165)
chr3 (15-82)||(20503451-20503518)
chr3 (13-87)||(8587022-8587096)
chr3 (29-125)||(21256952-21257045)
chr3 (2-87)||(25775481-25775567)
chr3 (13-87)||(28917985-28918059)
chr3 (29-82)||(26508110-26508163)
chr3 (22-87)||(28812508-28812573)
chr3 (27-96)||(49651778-49651847)
chr3 (2-58)||(10318064-10318119)
chr3 (15-87)||(14829676-14829747)
chr3 (15-87)||(16000017-16000089)
chr3 (2-73)||(21305218-21305290)
chr3 (15-87)||(21479104-21479176)
chr3 (27-83)||(35994743-35994798)
chr3 (24-87)||(1509534-1509597)
chr3 (24-119)||(7928445-7928535)
chr3 (14-81)||(10268493-10268560)
chr3 (22-81)||(14832092-14832151)
chr3 (24-87)||(51206354-51206417)
chr3 (4-61)||(8412972-8413029)
chr3 (13-81)||(14216876-14216944)
chr3 (13-81)||(14223005-14223073)
chr3 (15-87)||(39756222-39756294)
chr3 (15-87)||(41961651-41961723)
chr3 (28-87)||(750619-750678)
chr3 (93-128)||(34910400-34910435)
chr3 (13-87)||(15796295-15796369)
chr3 (13-83)||(24205046-24205116)
chr3 (94-128)||(26492146-26492180)
chr3 (13-87)||(26492206-26492280)
chr3 (1-81)||(32400715-32400792)
chr3 (15-61)||(40052318-40052364)
chr3 (27-72)||(14979179-14979224)
chr3 (22-87)||(34185124-34185189)
chr3 (28-80)||(3164033-3164085)
chr3 (14-82)||(17005625-17005693)
chr3 (27-87)||(27505244-27505304)
chr3 (22-82)||(29508437-29508497)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-128)||(46666-46775)
[»] scaffold0103 (1 HSPs)
scaffold0103 (13-80)||(51795-51862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (22-79)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-81)||(178825-178894)
[»] scaffold0223 (1 HSPs)
scaffold0223 (13-81)||(20156-20224)
[»] scaffold0306 (1 HSPs)
scaffold0306 (13-87)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (13-87)||(21869-21943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-83)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (15-80)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (22-87)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-87)||(23749-23828)
[»] scaffold0793 (1 HSPs)
scaffold0793 (19-80)||(4891-4953)
[»] scaffold0652 (1 HSPs)
scaffold0652 (13-87)||(463-537)
[»] scaffold0053 (1 HSPs)
scaffold0053 (13-87)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (13-50)||(10509-10546)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-81)||(92791-92859)
[»] scaffold0021 (1 HSPs)
scaffold0021 (27-82)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (22-80)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (22-76)||(33375-33429)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-87)||(241578-241652)
[»] scaffold0450 (1 HSPs)
scaffold0450 (27-87)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (37-81)||(3856-3900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-87)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 10298553 - 10298733
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacgcctaatccgagga 10298652  T
Q  113 gtgtccgcgcttcataagagtatgatgcacttacatgtctctcaccaccatcgttcataagaactgttggaccattttgat 193  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10298653 gtgtccgtgcttcataggagtatgatgcacttacatgtctctcaccaccgtcgttcataagaactgttggaccattttgat 10298733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 10290270 - 10290333
Alignment:
Q  130 gagtatgatgcacttacatgtctctcaccaccatcgttcataagaactgttggaccattttgat 193  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10290270 gagtatgatgcacttacatgtctctcaccaccgtcgttcataagaactgttggagcattttgat 10290333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 31084309 - 31084393
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg 31084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8419999 - 8420121
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgt 100  Q
    |||||||||||||||||| | |||| |||||| | |||||||||||||||| | ||||||| |||||||||||||||||||| ||     |||||| ||     
T  8419999 ggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtg-----tcggacgcgc 8420093  T
Q  101 ctaatccgaggagtgtccgcgcttcata 128  Q
    ||||| |||||||| |||| ||||||||    
T  8420094 ctaattcgaggagtatccgtgcttcata 8420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 42893353 - 42893418
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  42893353 acacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 6247609 - 6247680
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 21191131 - 21191057
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||  |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21191131 cggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 14674253 - 14674322
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | |||||||||||||||||    
T  14674253 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 15405119 - 15405062
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  15405119 acactgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 9747111 - 9747055
Alignment:
Q  130 gagtatgatgcacttacatgtctctcaccaccatcgttcataagaactgttggacca 186  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  9747111 gagtatgatgaacttacatgtctctcaccaccgtcgttcacaaggactgttggacca 9747055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 13287474 - 13287366
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg-----ttgtcctatcggacacgtctaatcc 107  Q
    |||||||||||||  |||||||  ||||||||||||||| ||||||||| || ||||| |||||||||||      |||||| ||||||||| ||||||     
T  13287474 cggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtcctgtcggacacgcctaatct 13287375  T
Q  108 gaggagtgt 116  Q
    |||||||||    
T  13287374 gaggagtgt 13287366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 39698525 - 39698593
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  39698525 cggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 41995457 - 41995515
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||| |||| |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 21576803 - 21576746
Alignment:
Q  30 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 21576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 33178018 - 33178083
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||| ||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 41633728 - 41633800
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||| ||||| |||| ||||||    
T  41633728 acactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcgg 41633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 5894897 - 5894823
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 98  Q
    |||| ||||||||||||||||||||||| ||| |||||  ||| ||| ||||||||||| |||| | ||||||||    
T  5894897 acacggacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacac 5894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 21522734 - 21522808
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21522734 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 21533300 - 21533374
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21533300 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 30135306 - 30135372
Alignment:
Q  22 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||||||||| ||||    
T  30135306 acacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 7677702 - 7677763
Alignment:
Q  26 accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||| |||||||||||||||| ||||||||| || || ||||| |||||||| ||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtc 7677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 17925258 - 17925189
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaat 71  Q
    ||||||||||||||||||| ||| ||||||  || ||||||||| | ||| ||||||||| |||||||||    
T  17925258 gacacggacaccggacactgacataccgacctaaataataatttaagaaaatcacataattcaatgtaat 17925189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 21542028 - 21542088
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  21542028 ccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 21542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 3966597 - 3966632
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3966597 ggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3966475 - 3966561
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||| ||||||| |||  |||||||  |||||||||||| ||| ||||| ||| || |||||||| | |||||| ||||    
T  3966475 ggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 4105241 - 4105310
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaa--gtcacataatacaatgtaattacaagtgt 80  Q
    |||| ||| |||| |||||| ||||||||||||||||||   ||||||||| || |||||||||||||||    
T  4105241 cggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 12159951 - 12160005
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||||||||||| |||||  ||||||||  ||||||||||||| |||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcg 12160005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 18316989 - 18316951
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataata 62  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  18316989 acaccgacacaactaataattttaaaaaatcacataata 18316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19579685 - 19579759
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| | || |||||||| |||||||||||| ||| |||||||||  | || |||||||||||||| ||||    
T  19579685 cggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtc 19579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 24906373 - 24906307
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||| |||| || |||||  ||||||||||||||| | ||||||| || |||||||||||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 37328919 - 37328845
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| | ||||||||||| | ||||||||| |||| ||||| ||| || |||||||||| |||||| ||||    
T  37328919 cggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtc 37328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| | || || ||||| |||||||||||||||| ||| | ||| || |||||||||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 30098301 - 30098370
Alignment:
Q  4 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    ||||||||||||||||| ||||  ||| ||   ||||||||||| ||| ||||||||| |||||||||||    
T  30098301 cacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 6770527 - 6770575
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||||| |||||| ||||||||||||||||| | ||| |||||||||    
T  6770527 cggacactgacacactgacacaactaataatttaagaaaatcacataat 6770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19552618 - 19552570
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  19552618 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 19552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 30183547 - 30183607
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||||  |||||| || |  | ||||||||||||||| ||||    
T  30183547 ccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtc 30183607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 43001807 - 43001851
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||||||| | ||||||| || |||||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 5e-24; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 9408420 - 9408328
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||| |||| ||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 3991318 - 3991431
Alignment:
Q  23 cacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc---gttgtcctatc-----ggacacgtctaatccgaggagt 114  Q
    ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||   || ||| ||||     ||||||| ||||||||||||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagt 3991417  T
Q  115 gtccgcgcttcata 128  Q
    ||||| ||||||||    
T  3991418 gtccgggcttcata 3991431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35861951 - 35862016
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 11061151 - 11061077
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||  | | ||||||||||||||| ||||    
T  11061151 cggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 18215261 - 18215187
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| ||||| || |||||||||||||||| ||||||||| || |||| |||||||||||| ||||    
T  18215261 cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtc 18215187  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 13770675 - 13770760
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 98  Q
    |||||||| | || |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||||||||| | ||||||||    
T  13770675 cggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 24339635 - 24339700
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 7438704 - 7438764
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  7438704 ccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 25481895 - 25481953
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 27945025 - 27945099
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||| ||||||||||||| ||| | ||||||| || ||||||||||||||||| ||||    
T  27945025 cggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 5409910 - 5409825
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    ||||||| |||| | || ||| |||||||||||||||| ||||||||| || || |||||||||||||| |||| | |||||||||    
T  5409910 ggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 8234139 - 8234196
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 79  Q
    |||||||||||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  8234139 acacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9778469 - 9778569
Alignment:
Q  1 ggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggaca 97  Q
    ||||||||||||||||||| | ||  |||| |||||| || ||||||||||||| ||||||||| || | ||||||||||||||| |||| | |||||||    
T  9778469 ggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggaca 9778568  T
Q  98 c 98  Q
    |    
T  9778569 c 9778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 32094093 - 32094009
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||||||  || ||||||||||||||||||||||  ||||||||| || ||||||||||| ||||| |||| | |||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg 32094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 33994199 - 33994270
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||| ||||| |||||| ||||||||||| |||||||||| || || |||||||||||||| ||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 11665499 - 11665441
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||| ||||||||| || | |||||| |||||||| ||||    
T  11665499 gacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 26033513 - 26033467
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 43027544 - 43027470
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||||  |||| || |||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  43027544 cggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc 43027470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 7197363 - 7197298
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||| |||||||||| ||||| |||  |||| |||||||||||||||||||| ||||    
T  7197363 acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtc 7197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 11831409 - 11831481
Alignment:
Q  5 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 78  Q
    |||||||| |||||| | |||| |||||||||||||||||||||||| ||| |||||  | |||||||||||||    
T  11831409 acggacactggacacga-cacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24105662 - 24105731
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||| |||||||||||||||| |  ||| || || |||||||||||||||||    
T  24105662 cggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 6630985 - 6630913
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| |||| || |||||||| | |||||| ||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtc 6630913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 25822648 - 25822720
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||| |||||||||||||||||||||||||    || ||| || ||||||||||||||||| |||| ||||||    
T  25822648 acacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcgg 25822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 1433542 - 1433577
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  1433542 ggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 11272649 - 11272587
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcac--ataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||| ||||||||||||| ||||  ||||| || ||||||||||||||||| ||||    
T  11272649 ccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtc 11272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 130
Target Start/End: Complemental strand, 18035839 - 18035804
Alignment:
Q  95 acacgtctaatccgaggagtgtccgcgcttcataag 130  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18035839 acacgtctaatccgaggagtgtccgtgcttcataag 18035804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 29763247 - 29763201
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  29763247 gacactgacacaccaacacaacttataatttgaaaaaatcacataat 29763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 43249977 - 43250047
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  43249977 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 43250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 21826259 - 21826304
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataa 60  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  21826259 gacactaacacgccgacacgactaataatttaaaaaaatcacataa 21826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7058429 - 7058477
Alignment:
Q  32 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||||||||||| |||  |||| || |||||||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 10042921 - 10042969
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||||| |||| ||||||| ||||||||||||| ||| |||||||||    
T  10042921 cggacacttacacgccgacaccactaataatttgataaattcacataat 10042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 21560484 - 21560568
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaa-----aaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||||| |||| |||| ||| |||||||||||||     ||| ||||||||| || ||||||||||||||||| |||| ||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcgg 21560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 29787444 - 29787384
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||| |||||| |||||||  |||||||||||| ||| ||||||||| || ||||||||    
T  29787444 cggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40287422 - 40287363
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||| |||||||||| |||||||||||||| ||| || || || |||||||||||||||||    
T  40287422 acacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  43 tttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 32434798 - 32434723
Alignment:
Q  7 ggacaccggacactaacac-accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  32434798 ggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37598804 - 37598889
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||| |||||||| ||||    
T  37598804 ggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtc 37598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 22881689 - 22881617
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38078754 - 38078662
Alignment:
Q  1 ggacacggacaccggacactaacac----ac--cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||| |||||    ||  ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  38078754 ggacacggacaccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 31672979 - 31672896
Alignment:
Q  4 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| || ||||||| ||||||||||||| |||||||||||||||| |||| |||| || ||||||||||||| ||| ||||    
T  31672979 cacggatacgggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 40258997 - 40258934
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 1705067 - 1704993
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  1705067 cggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtc 1704993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 24577245 - 24577187
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 48450662 - 48450551
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 112  Q
    |||||||| |||| || ||||| |||||||||||||||| | |||||||  | |||||||||||||||||  | |  |  ||||||||||||||||||||    
T  48450662 cggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg--gac--acaggacacgtctaatccgagga 48450567  T
Q  113 gtgtccgcgcttcata 128  Q
    ||||||| ||||||||    
T  48450566 gtgtccgtgcttcata 48450551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 28273147 - 28273083
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 93  Q
    |||||||||||| |||||||||| ||| ||||| || ||||||||||||||||| ||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcg 28273083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 1815241 - 1815316
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 88  Q
    |||||||| |||| ||||||||| |||| |||| ||||| ||||||||| || ||||||||||||||||| |||||    
T  1815241 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtcc 1815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 113292 - 113350
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 1486768 - 1486698
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||| |||||||||||||||| ||||||||| || |||||||| |||||||| |||| | |||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 32461529 - 32461471
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32461529 acacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 42359524 - 42359450
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  42359524 cggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 46348458 - 46348384
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  46348458 cggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 46348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 18556531 - 18556466
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 78  Q
    |||||||| |||| |||||||| |||||||||||||||  |||||||||  |||||||||||||||    
T  18556531 cggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 21378571 - 21378631
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||||||| ||||||| |||||||| | ||||||| || |||||||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24334793 - 24334665
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||||||||     |||||| || ||||||||||||||||| ||||  |   | ||||    
T  24334793 ggacacggacaccggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtcggacacgtcacg 24334694  T
Q  100 tctaatccgaggagtgtccgcgcttcata 128  Q
     ||||||| || |||||||| ||||||||    
T  24334693 cctaatccaagtagtgtccgtgcttcata 24334665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 47989484 - 47989555
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| ||||||||| ||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  47989484 gacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 6332666 - 6332728
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  6332666 acacggacacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtc 6332728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 22515946 - 22515888
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 18337338 - 18337387
Alignment:
Q  38 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 38503304 - 38503385
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||||||||||||||||||||  |||||||||||| ||| ||| ||| | || |||||||| | |||||| |||||| ||||    
T  38503304 cggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 51410022 - 51410083
Alignment:
Q  27 ccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 51410083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 398840 - 398780
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||||| |||| |||||||  |||||||||||||||| ||||||||| || ||||||||    
T  398840 cggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  30 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||| |||||||||||| ||| ||||||||| || |||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 34298420 - 34298480
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||| ||| |||||||||||| ||||||||||||| ||| ||||||||| || ||||||||    
T  34298420 cggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 6427459 - 6427516
Alignment:
Q  27 ccgacacaactaataatttg---aaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||||||||||||||   ||||| ||||||||| |||||||| ||||||||||    
T  6427459 ccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 9828138 - 9828173
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9828138 ggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 14359587 - 14359529
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  14359587 acacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 22881603 - 22881568
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22881603 ggacacgtctaatccgaggagtgtccgtgcttcata 22881568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 30359374 - 30359441
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||| |||||||| ||||||| ||||||||||||| |||||||||  | ||||| | |||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 2288240 - 2288182
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    ||||||||||||||||||  | ||||||||| | ||| ||||||||| |||||||||||    
T  2288240 gacactaacacaccgacaacaataataatttaagaaaatcacataattcaatgtaatta 2288182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 5376575 - 5376501
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| |||||||  |||||||||| | ||| | ||||||| || |||||||| |||||||| ||||    
T  5376575 cggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 6612222 - 6612172
Alignment:
Q  37 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 5927392 - 5927347
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 9828019 - 9828087
Alignment:
Q  3 acacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 72  Q
    |||| |||||||||||| | ||| ||||||| ||||||||||||| ||| ||||||||| || |||||||    
T  9828019 acacagacaccggacacga-cacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 19058922 - 19058857
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||| |||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 19058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 2283669 - 2283717
Alignment:
Q  32 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| ||||||||||||| |||||| || ||||||||||| ||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgt 2283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 6427334 - 6427394
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||||| |||| || ||||  |||||||||||| ||| ||||||||| |||||||||||    
T  6427334 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 9103624 - 9103672
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 9103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16812527 - 16812575
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||||| |||||||||||| | ||||||||||| ||| |||||||||    
T  16812527 cggacactgacacaccgacaccaataataatttgacaaaatcacataat 16812575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17778549 - 17778604
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||||||||||||||| ||||   ||||| ||||||||||||||||| ||||    
T  17778549 gacacagctaataatttgaaaaaatcac---atacagtgtaattacaagtgtcggtgtc 17778604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35919369 - 35919265
Alignment:
Q  1 ggacacggacac-cggacactaacacaccgacacaactaataatttg-----aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    |||||| ||||| ||||||| ||||| |||||||| |||||||||||     ||||| ||||||||| || |||||||| |||||||  |||| | ||||    
T  35919369 ggacactgacacacggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcgg 35919270  T
Q  95 acacg 99  Q
    |||||    
T  35919269 acacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 36878447 - 36878519
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| |||||||  |||||||||||| ||| ||||||||| || |||||||| | |||||| ||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 8e-23; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7801243 - 7801157
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  7801243 ggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 426589 - 426479
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 112  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||     ||||||||| |||||| |||||    
T  426589 cggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtg-----tcggacacgcctaatctgagga 426495  T
Q  113 gtgtccgcgcttcata 128  Q
    ||||||| ||||||||    
T  426494 gtgtccgtgcttcata 426479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 2117069 - 2117174
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcg 121  Q
    |||| |||||||  |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| | ||||||| | |||||| |||||||||||| |    
T  2117069 acactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg-tgtcgtgtcggacatgcctaatcggaggagtgtccgtg 2117167  T
Q  122 cttcata 128  Q
    |||||||    
T  2117168 cttcata 2117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 9107445 - 9107371
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  9107445 cggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 9107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 15489807 - 15489733
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| ||||    
T  15489807 cggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 34595118 - 34595192
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| | |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  34595118 cggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 10770748 - 10770675
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 16766682 - 16766755
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 8777048 - 8776981
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  8777048 cggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 16833294 - 16833361
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 8365594 - 8365520
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||||||| |  ||||||||||||||||| ||||    
T  8365594 cggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 12696308 - 12696394
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||||| |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||  |||| | |||||||||    
T  12696308 cggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 12696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 17302543 - 17302615
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||| | |||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtc 17302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 7938101 - 7938218
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc--tatcg-gacacgtctaatccgag 110  Q
    ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | |||||||| |||||||| |||||   | || |||||| || |||||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcctgatccgag 7938200  T
Q  111 gagtgtccgcgcttcata 128  Q
    ||||||||| ||||||||    
T  7938201 gagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 17841664 - 17841598
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 79  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||    
T  17841664 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28152083 - 28152156
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28152083 cggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 28152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 31959146 - 31959212
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 853925 - 853860
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  853925 acacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 7977896 - 7977831
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 31384923 - 31384972
Alignment:
Q  32 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 1191761 - 1191706
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||    
T  1191761 ccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 4877935 - 4878001
Alignment:
Q  22 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| ||||||||||| |||||||||||||||  | | ||||||||||||||| ||||    
T  4877935 acacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc 4878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28715264 - 28715353
Alignment:
Q  1 ggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||| | ||  |||| |||||  |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  28715264 ggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 28715353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  37 taataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7027213 - 7027300
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||| |||||||||| || |||||||  || |||||||| ||||| ||||||||| || |||||||| | |||||| ||||    
T  7027213 ggacacggacatcggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 3398603 - 3398676
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| ||||| || |||||||| |||| ||| ||||    
T  3398603 cggacactgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtc 3398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 7930289 - 7930363
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||  ||||||||| ||||||||||||||| |||||||||  | || |||| ||||||||| ||||    
T  7930289 cggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtc 7930363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||| ||||| ||||||||| || |||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 33001355 - 33001290
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||  |||||||||||||||| |||||||||  |||||||||| | |||||| ||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtc 33001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 34225873 - 34225824
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||| ||||||||||||||||||||||| || |||||| || ||||||||    
T  34225873 acactgacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 5970168 - 5970120
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 76  Q
    |||||||  ||||||||||||||| ||||||||| || |||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 24115906 - 24115862
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    ||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  24115906 gacacaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 30866210 - 30866150
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||| ||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 30298930 - 30299047
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcgg-acacgtctaatccgag 110  Q
    |||||||| |||| |||||||| ||||||||||||||||  | ||||||| || ||||||||||||||||| |||| |  ||| ||||||||||||||||    
T  30298930 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30299029  T
Q  111 gagtgtccgcgcttcata 128  Q
    ||||||||| ||||||||    
T  30299030 gagtgtccgtgcttcata 30299047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 30327798 - 30327915
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcgg-acacgtctaatccgag 110  Q
    |||||||| |||| |||||||| ||||||||||||||||  | ||||||| || ||||||||||||||||| |||| |  ||| ||||||||||||||||    
T  30327798 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30327897  T
Q  111 gagtgtccgcgcttcata 128  Q
    ||||||||| ||||||||    
T  30327898 gagtgtccgtgcttcata 30327915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 12895182 - 12895105
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||| |||| ||| |||||||||||||||| ||||||||| ||| |||||||||||||||| |||| | |||||||||    
T  12895182 acacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacg 12895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 11596438 - 11596360
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||| |||||| | || || ||| | |||||||||||||||| ||||||||| || |||||||||||||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 12797412 - 12797339
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||| || |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  12797412 cggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 12797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 23293061 - 23292987
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  23293061 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 23292987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 24543957 - 24544035
Alignment:
Q  5 acggacaccggacactaacacaccgacacaactaataatttgaaaaagt-cacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||| |||||| |||| ||||||||||||||||||| ||||| | ||| |||| || |||||||||||||||||    
T  24543957 acggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcg 24544035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 54580082 - 54580024
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  19482654 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 40481623 - 40481687
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 3947827 - 3947755
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 99  Q
    |||||||| |||||||||||||||| || |||||| || ||||||||||||||||  |||| | |||||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 21945501 - 21945561
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  21945501 ccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 715677 - 715615
Alignment:
Q  19 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  715677 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 753003 - 752941
Alignment:
Q  19 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  753003 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 14126184 - 14126118
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||||| |||||||   ||||||||||| ||||||||||||| || |||||||| |||||||    
T  14126184 gacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 29205451 - 29205497
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 35158060 - 35157986
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||| |||||||||||||| |||| |||||||||  | |||||||| |||||||| ||||    
T  35158060 cggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 2362041 - 2361976
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| |||||||||||||||| | |||||||  | |||||||| |||||||| ||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  30 acacaactaataatttgaaaaagtcacataatacaatgtaattaca 75  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 28964300 - 28964255
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4383352 - 4383419
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| ||||  ||| |||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  4383352 cggacactgacacgtcgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 11110768 - 11110708
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataata 62  Q
    ||||||||||||||||||  |||| |||||||||  |||||||||||||  ||||||||||    
T  11110768 gacacggacaccggacacagacacgccgacacaaggaataatttgaaaatatcacataata 11110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 16073373 - 16073452
Alignment:
Q  7 ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| || |||| || |||||| ||||||||||||||| || |||||| || ||||||||||||||||| ||||    
T  16073373 ggacactggactctgacacgccaacacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtc 16073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 20633469 - 20633536
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||||| ||||  ||||||  ||||||||||||||||   ||||||| |||||||||||||||||||||    
T  20633469 cggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaattacaagtgtcgt 20633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 28084514 - 28084574
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtc 81  Q
    |||| |||||||| |||| |||||||||||  ||||||||| |||||||||||||||||||    
T  28084514 acacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 31800544 - 31800484
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||||||| |||||||||| ||||| | | |||||  |||||||||||||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 34306864 - 34306805
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  34306864 ccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtc 34306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 4157145 - 4157207
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  4157145 acactgacacaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtc 4157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 38847078 - 38847019
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||| |||||||| |||||||||||||||| ||| || || || ||||||||||||||||    
T  38847078 acactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 49431009 - 49431084
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| | |||| |||||||| ||||||||||| ||||| ||||||||| || |||||||| |||||||| ||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc 49431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||| ||||  |||||||| ||||||||| ||||| |||||||||  | |||||||||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  37 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 12895340 - 12895275
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||| ||||||||||||||| |||||||||    |||||||| |||||||| ||||    
T  12895340 acacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37203239 - 37203315
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||||||||||||||| |   ||| |||||  |||||||||||||||| | |||||||  | |||||||||||||||    
T  37203239 ggacacggacaccggacacga---cacagacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 4383448 - 4383484
Alignment:
Q  92 cggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  4383448 cggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 12884380 - 12884348
Alignment:
Q  96 cacgtctaatccgaggagtgtccgcgcttcata 128  Q
    |||||||||||||||||||||||| ||||||||    
T  12884380 cacgtctaatccgaggagtgtccgtgcttcata 12884348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 119
Target Start/End: Complemental strand, 17210069 - 17210041
Alignment:
Q  91 tcggacacgtctaatccgaggagtgtccg 119  Q
    |||||||||||||||||||||||||||||    
T  17210069 tcggacacgtctaatccgaggagtgtccg 17210041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32273612 - 32273553
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||| ||||||||||| | |||| || |||||||||||||||||||||| | |||||||    
T  32273612 ggacacagacaccggaca-tgacacgccaacacaactaataatttgaaaaaataacataat 32273553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 36635308 - 36635368
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||||| |||| || |||| ||||||||||||| ||| ||||||||| || ||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 51701253 - 51701309
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||| |||||| |||||||||||||||| | |||||||  | |||||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 17835 - 17749
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 88  Q
    |||||||||| |||||| |||||| | ||||||||||||||||||||||| |||||||||  | ||||||||||||||||| |||||    
T  17835 gacacggacatcggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcc 17749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 19536473 - 19536362
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagg 111  Q
    |||||| | |||| ||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||     ||||||||| |||||||||||    
T  19536473 cggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg-----tcggacacgcctaatccgagg 19536379  T
Q  112 agtgtccgcgcttcata 128  Q
    |||||||  ||||||||    
T  19536378 agtgtccatgcttcata 19536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 37558961 - 37559035
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||    
T  37558961 cggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 20539749 - 20539633
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg-gacacgtctaatccgagg 111  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| |||| |  || |||||| || ||||||||    
T  20539749 cggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtggcgagacacgcctgatccgagg 20539650  T
Q  112 agtgtccgcgcttcata 128  Q
    |||||||| ||||||||    
T  20539649 agtgtccgtgcttcata 20539633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 21374774 - 21374706
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||||||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||    
T  21374774 cggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 15657848 - 15657922
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||||||| || ||||||||||| ||||| ||||    
T  15657848 cggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtc 15657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 30717605 - 30717531
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||| ||||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  30717605 cggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 15972857 - 15972931
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||| ||||||||||||||| | ||| ||| || ||||||||||||||||| ||||    
T  15972857 cggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtc 15972931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 18421947 - 18422021
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||| ||||||||| ||||  ||||||||| || ||||||||||||||||| ||||    
T  18421947 cggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 30335401 - 30335475
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||| ||| ||||||||||||||||||||||||| | |||||||  | ||||||||||| ||||| ||||    
T  30335401 cggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc 30335475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6940239 - 6940308
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||| |||||||||| ||||||| |||||||  | |||||||||||||||||    
T  6940239 cggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 18841087 - 18841014
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| |||| | ||||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 23718010 - 23718079
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  23718010 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24105682 - 24105751
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  24105682 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30404925 - 30404856
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||   ||||||||||||||| ||||||||| || |||||||||||||||||    
T  30404925 cggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 20473320 - 20473380
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||| ||||| ||| ||||| || ||||||||||||||||| ||||    
T  20473320 ccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtc 20473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||||||||||  |||||| || || ||||||||||||||||| ||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 2438778 - 2438720
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 2438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 37419719 - 37419793
Alignment:
Q  5 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 79  Q
    |||||||||||||||| |||| ||||||   | |||||||||||||| ||||| ||| || ||||||||||||||    
T  37419719 acggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 37419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 12668489 - 12668424
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||| |||||||||||||||||| | ||||||| || |||||||| |||||||| ||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||||||||||||||||| ||| ||||| || ||||||||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||| | |  |||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 36756417 - 36756345
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| ||||  ||||||||||||||||||||| || | ||||||| || |||||||| |||||||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 5040730 - 5040792
Alignment:
Q  27 ccgacacaactaataatttgaaaaag--tcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||| ||||||||||||||||   ||||||||| |||||||||||||||||||| ||||    
T  5040730 ccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 23058518 - 23058443
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| | |||| || |||||| |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23058518 cggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 23058443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26769478 - 26769569
Alignment:
Q  1 ggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||| |     |||| ||||||||||||||||||||||||  |||||| ||    ||||||||||||||||| ||||    
T  26769478 ggacacggacaccggacacgacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||||| ||||||||| | ||||||| || ||||||||||||||||| ||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 14996299 - 14996213
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 98  Q
    |||||||| |||  |||||||| |||||||||||| |||| ||| |||||  | ||||||||||||||||| |||| | ||||||||    
T  14996299 cggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 29176566 - 29176501
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| |||| | ||||||  |||||||||||||| |||||||||| || |||||||| ||||||    
T  29176566 gacacttacacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgt 29176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 34691857 - 34691769
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcgcttcataa 129  Q
    |||||||||||| ||| ||| ||||| || |||||||| | |||||| ||     ||||||||| ||||||||||||||||||| | |||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatccgaggagtgtccgtgtttcataa 34691769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 34714269 - 34714181
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcgcttcataa 129  Q
    |||||||||||| ||| ||| ||||| || |||||||| | |||||| ||     ||||||||| ||||||||||||||||||| | |||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatccgaggagtgtccgtgtttcataa 34714181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 21091707 - 21091775
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| ||||||||||||  |||||||||| | ||| | ||||| | || ||||||||||||||||    
T  21091707 cggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 22651960 - 22652034
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  22651960 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtc 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 30271371 - 30271300
Alignment:
Q  8 gacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 79  Q
    ||||||||||||| |||| |||||||| ||||| |||||||||| ||||||||| || ||||||||||||||    
T  30271371 gacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 36450829 - 36450762
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  36450829 cggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 15816204 - 15816130
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||  | |||||||| |||||||| ||||    
T  15816204 cggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 4298956 - 4298887
Alignment:
Q  18 actaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  4298956 actaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 25566836 - 25566899
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  25566836 acactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 18170557 - 18170483
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18170557 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 18634125 - 18634051
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18634125 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  17 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 4948657 - 4948710
Alignment:
Q  34 aactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 13437038 - 13436965
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| ||  ||||| |||||||||| ||||    
T  13437038 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtc 13436965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 25192422 - 25192353
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||| |||||||||||||||||| ||||||| || | |||||| ||||||||    
T  25192422 cggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29510379 - 29510310
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||    
T  29510379 cggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 2572116 - 2572057
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 2572057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 8342967 - 8343030
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 8343309 - 8343368
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 5813576 - 5813650
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  5813576 cggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 5813650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 20873053 - 20873127
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||| |  ||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  20873053 cggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 21465391 - 21465463
Alignment:
Q  5 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||||||||||| |   ||| |||||| |||||||||||||||| ||| ||||| | ||||||||||||||||    
T  21465391 acggacaccggacacga---cacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgt 21465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||| |||| |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 41832001 - 41831945
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    ||||||||  ||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  41832001 ccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgt 41831945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 17751739 - 17751774
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17751739 ggacacgcctaatccgaggagtgtccgcgcttcata 17751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 17760726 - 17760761
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17760726 ggacacgcctaatccgaggagtgtccgcgcttcata 17760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 18407717 - 18407772
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||| |||||||||  ||||| ||||||||| || |||||||||||||||||    
T  18407717 ccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 22652070 - 22652105
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22652070 ggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 28745505 - 28745556
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||| ||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtc 28745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 31556985 - 31557054
Alignment:
Q  17 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||| ||||||||  ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  31556985 cactgacacgccgacacagttaataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 11803355 - 11803388
Alignment:
Q  95 acacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||| ||||||||    
T  11803355 acacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 30077439 - 30077394
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 17468568 - 17468516
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||||| ||||||||| |||| ||||||||| |  |||||||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgt 17468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24196672 - 24196628
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcaca 57  Q
    |||||||  |||| ||||||||||||||||||||||||| |||||    
T  24196672 cggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 31236643 - 31236583
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||| |||||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 34897092 - 34897179
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    |||||||||||| ||| ||||||||| || |||||||| | |||||| ||     |||||||| | |||| ||||||||||||| ||||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatg-----tcggacacatgtaattcgaggagtgtccgtgcttcata 34897179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 36934654 - 36934714
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 73  Q
    |||||||||||||  ||||||  ||||||||| |||||| ||||||||| || ||||||||    
T  36934654 cggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  38 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 44067502 - 44067570
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 44067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 34910294 - 34910382
Alignment:
Q  5 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 94  Q
    ||||||||| ||||| | ||| ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||| ||||||    
T  34910294 acggacaccagacacga-cacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcgg 34910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| || |||||| |||||||||| ||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 25948939 - 25948848
Alignment:
Q  36 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcgcttcat 127  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| | |||| | |||||||||| |||||| |||| |||||| |||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtgtaatccaaggaatgtccgtgcttcat 25948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 10335361 - 10335287
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  10335361 cggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 55401059 - 55401133
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| | || ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  55401059 cggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 55401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  16 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 14209106 - 14209165
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||| ||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||| |||| |||||||||| |||||||||||||| | ||||||| || |||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 8587096 - 8587022
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| ||| |||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8587096 cggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 21257045 - 21256952
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccgcgcttc 125  Q
    |||||| |||||||||||||||| ||||||||| || | ||||||||||||||| | || |   ||||||  ||||||||||||||||||| |||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgt---ggacacacctaatccgaggagtgtccgtgcttc 21256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 25775481 - 25775567
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaa-agtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||||||||| || ||||||||||||||||| ||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28917985 - 28918059
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28917985 cggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  29 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    |||||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 28812508 - 28812573
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||||||||||||||||| || ||||||||| || |||| |||||||||||| ||||    
T  28812508 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 28812573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 49651847 - 49651778
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggac 96  Q
    |||||||  |||||||||||||||| ||||||||| || ||||||||||||||||| |||| | ||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 10318119 - 10318064
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacat 58  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||    
T  10318119 gacacggacac-ggacactgacacgccgacacagctaataatttgaaaaagtcacat 10318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 14829676 - 14829747
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaaa-tcacataattcatggtaattacaagtgtcggtgtc 14829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 16000089 - 16000017
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| ||||||||||||||||||| ||||| | ||||||| || ||||| ||||||||||| ||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtc 16000017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 21305218 - 21305290
Alignment:
Q  2 gacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaatta 73  Q
    |||||||||||| ||||||||||| |||||||  ||||||||||| ||||| |||||||||  ||||||||||    
T  21305218 gacacggacaccagacactaacacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 21479104 - 21479176
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| |||||||| |||||||||||||||| ||||| ||| || ||||||||| ||||||| ||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 35994798 - 35994743
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  35994798 ccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgt 35994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 1509534 - 1509597
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 7928445 - 7928535
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtccg 119  Q
    ||||||||||  |||||||||||||||| ||||||||| || |||||||| | |||||| ||     ||||||||| |||||| ||||||||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatctgaggagtgtccg 7928535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||| |||| ||||||||  ||||||||||||||| |||||||||  | ||||||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 14832092 - 14832151
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||| |||| ||| |||||||||||||||| ||||||||  |||||||||||||||||||    
T  14832092 acacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 51206417 - 51206354
Alignment:
Q  24 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||| |||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  51206417 acactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 8413029 - 8412972
Alignment:
Q  4 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| |||  ||||||||    
T  8413029 cacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataat 8412972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14216876 - 14216944
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||||    
T  14216876 cggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtc 14216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14223005 - 14223073
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||||    
T  14223005 cggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtc 14223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 39756222 - 39756294
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| |||||| || ||||||||| ||||| |||||||||  ||| ||||||||||||||| ||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtc 39756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 41961723 - 41961651
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| |||| ||| ||||||||||||||||||||  |||||| || |  ||||||||||||||||| ||||    
T  41961723 gacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtc 41961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 750678 - 750619
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||||||||||||||  ||||||||| |  || |||||||||||||| ||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtc 750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 34910400 - 34910435
Alignment:
Q  93 ggacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||||||||||| ||||||||    
T  34910400 ggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 15796369 - 15796295
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||| | |||| ||||||||  ||||||||||||||| ||| ||||| || ||||||||||| ||||| ||||    
T  15796369 cggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 24205116 - 24205046
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  24205116 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 24205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 26492180 - 26492146
Alignment:
Q  94 gacacgtctaatccgaggagtgtccgcgcttcata 128  Q
    ||||||||||||||||||| |||||||||||||||    
T  26492180 gacacgtctaatccgaggaatgtccgcgcttcata 26492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 26492280 - 26492206
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||| | |||||||||||||||| ||| | ||| || ||||||||||||| ||| ||||    
T  26492280 cggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtc 26492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32400792 - 32400715
Alignment:
Q  1 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||| |||||||||||| ||||  ||||||| |||||||||||||||  | |||||||    ||||||||||||||||    
T  32400792 ggacacgaacaccggacactgacacggcgacacagctaataatttgaaaagattacataat---ttgtaattacaagtgtc 32400715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 40052318 - 40052364
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 61  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 40052364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 14979179 - 14979224
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 72  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||    
T  14979179 ccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 34185189 - 34185124
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| |||||||  |||||||||| ||||| ||||| ||| || ||||||||||||||||| ||||    
T  34185189 acacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtc 34185124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  28 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    ||||||| |||||||||||||||| ||||||||| || |||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 17005693 - 17005625
Alignment:
Q  14 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||| || |||| |||| ||||||||||||| ||| ||| ||||| || |||||||| ||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 27505244 - 27505304
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| ||||||||||  |||| |||||||||  | ||||||||||||||||| ||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc 27505304  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 29508437 - 29508497
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||| || ||||||||||||||||| ||| ||||| || |||||||| | ||||||    
T  29508437 acacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

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Target: scaffold0027 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 46666 - 46775
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 112  Q
    |||||| | |||| ||||||||  ||||||||||||||| ||||||||| || ||||||||||| ||||| ||||      |||||| ||||||||||||    
T  46666 cggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc------gacacgcctaatccgagga 46759  T
Q  113 gtgtccgcgcttcata 128  Q
    ||||||| ||||||||    
T  46760 gtgtccgtgcttcata 46775  T

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Target: scaffold0103 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 51795 - 51862
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  51795 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 14523 - 14580
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 79  Q
    |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 178894 - 178825
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtc 81  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  178894 cggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 20156 - 20224
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  20156 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 13384 - 13458
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  13384 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 21943 - 21869
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  21943 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 225343 - 225273
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 83  Q
    |||||||| |||| ||||||||  ||||||||||| ||| | ||||||||||||||||||| |||||||||    
T  225343 cggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgt 225273  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 19562 - 19626
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  19562 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 8003 - 8067
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||    
T  8003 acacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtc 8067  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 23749 - 23828
Alignment:
Q  9 acaccggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||||||| |||||| | ||||  |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23749 acaccggacactgacacactgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 23828  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 4953 - 4891
Alignment:
Q  19 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  4953 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 537 - 463
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| | || |||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  537 cggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 463  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 8782 - 8856
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| || ||  | ||||||||||||||||| ||||    
T  8782 cggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc 8856  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 10546 - 10509
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaa 50  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10546 cggacactaacacaccgacacagctaataatttgaaaa 10509  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 92791 - 92859
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    |||||||| |||| |||||||  |||||||||||| ||| | ||||||| || ||||||||||||||||    
T  92791 cggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 130480 - 130535
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 82  Q
    ||||||||  ||||| ||||||||| ||||||||| || |||||||||||||||||    
T  130480 ccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 80  Q
    |||| |||||||||||||||||||| |||| |||||||||  | |||||||| ||||||    
T  7377 acacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 33429 - 33375
Alignment:
Q  22 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 76  Q
    |||| |||||||| |||||||||||||||| | ||||||| || |||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 241578 - 241652
Alignment:
Q  13 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    |||||||| |||| |||||||| ||||||||||| |||| |||||||||  | ||||||||  ||||||| ||||    
T  241578 cggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtc 241652  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 8696 - 8636
Alignment:
Q  27 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||||||||||||||||||||||  ||||||||| |  | ||||||||| ||||| ||||    
T  8696 ccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtc 8636  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 3900 - 3856
Alignment:
Q  37 taataatttgaaaaagtcacataatacaatgtaattacaagtgtc 81  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 135385 - 135313
Alignment:
Q  15 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 87  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||||| |  |||||||| | |||||| ||||    
T  135385 gacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

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