View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_764 (Length: 203)

Name: NF10145A_low_764
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_764
NF10145A_low_764
[»] chr3 (32 HSPs)
chr3 (14-186)||(23758444-23758616)
chr3 (14-186)||(12248329-12248501)
chr3 (14-186)||(9992794-9992966)
chr3 (14-186)||(13382153-13382325)
chr3 (14-186)||(13392747-13392919)
chr3 (14-192)||(4744896-4745074)
chr3 (14-192)||(5511852-5512030)
chr3 (14-192)||(5546505-5546683)
chr3 (14-186)||(6499864-6500036)
chr3 (14-192)||(5626861-5627039)
chr3 (14-192)||(12295704-12295882)
chr3 (14-192)||(16477437-16477615)
chr3 (14-192)||(41684832-41685010)
chr3 (14-192)||(24661073-24661251)
chr3 (14-192)||(5875146-5875324)
chr3 (14-192)||(24392956-24393134)
chr3 (14-192)||(8775862-8776040)
chr3 (14-192)||(18485195-18485373)
chr3 (14-192)||(38195929-38196107)
chr3 (14-192)||(39373259-39373437)
chr3 (14-188)||(6219538-6219712)
chr3 (14-192)||(28323701-28323879)
chr3 (16-186)||(16390427-16390597)
chr3 (14-186)||(19779601-19779773)
chr3 (14-186)||(37867666-37867838)
chr3 (14-186)||(37876184-37876356)
chr3 (14-180)||(20682617-20682783)
chr3 (14-180)||(14466819-14466985)
chr3 (14-180)||(13122893-13123059)
chr3 (14-108)||(10635920-10636014)
chr3 (104-192)||(10654248-10654336)
chr3 (21-186)||(29470675-29470840)
[»] chr2 (16 HSPs)
chr2 (14-186)||(9907060-9907232)
chr2 (14-186)||(9772231-9772403)
chr2 (14-186)||(40223479-40223651)
chr2 (14-192)||(43346539-43346717)
chr2 (14-192)||(10268122-10268300)
chr2 (14-192)||(10278699-10278877)
chr2 (14-192)||(11404345-11404523)
chr2 (14-192)||(35254173-35254351)
chr2 (14-192)||(35264782-35264960)
chr2 (14-192)||(27222560-27222738)
chr2 (14-188)||(24337264-24337438)
chr2 (46-186)||(34803303-34803443)
chr2 (14-186)||(29245395-29245567)
chr2 (14-186)||(43083837-43084009)
chr2 (14-180)||(22959203-22959369)
chr2 (14-180)||(4211088-4211254)
[»] chr7 (22 HSPs)
chr7 (14-192)||(466541-466719)
chr7 (14-186)||(2715185-2715357)
chr7 (14-192)||(40051652-40051830)
chr7 (14-192)||(1988725-1988903)
chr7 (14-192)||(8011635-8011813)
chr7 (14-192)||(9086414-9086592)
chr7 (14-192)||(11097197-11097376)
chr7 (14-192)||(24735910-24736088)
chr7 (14-180)||(26698677-26698843)
chr7 (14-192)||(26399644-26399822)
chr7 (14-192)||(11006374-11006552)
chr7 (14-192)||(42867015-42867193)
chr7 (14-186)||(5686725-5686897)
chr7 (14-186)||(9434429-9434601)
chr7 (14-186)||(21001956-21002128)
chr7 (14-186)||(6876791-6876963)
chr7 (16-186)||(19992966-19993136)
chr7 (14-186)||(22090372-22090544)
chr7 (14-180)||(168094-168260)
chr7 (14-180)||(4213223-4213389)
chr7 (14-180)||(17959623-17959789)
chr7 (14-180)||(8618589-8618755)
[»] chr4 (15 HSPs)
chr4 (14-186)||(451756-451928)
chr4 (14-186)||(30935979-30936151)
chr4 (14-186)||(21997596-21997768)
chr4 (14-192)||(55754716-55754894)
chr4 (14-192)||(36019509-36019687)
chr4 (14-192)||(10750056-10750234)
chr4 (14-192)||(10963825-10964003)
chr4 (14-192)||(18761969-18762147)
chr4 (14-192)||(24641489-24641667)
chr4 (14-186)||(24026926-24027098)
chr4 (14-186)||(17919294-17919466)
chr4 (14-192)||(27657822-27658000)
chr4 (14-186)||(19953843-19954015)
chr4 (14-180)||(16257116-16257282)
chr4 (16-186)||(40469482-40469652)
[»] chr1 (17 HSPs)
chr1 (14-186)||(12731635-12731807)
chr1 (14-186)||(12742228-12742400)
chr1 (14-192)||(7508419-7508597)
chr1 (14-192)||(36245931-36246109)
chr1 (14-192)||(38096205-38096383)
chr1 (14-192)||(51655375-51655553)
chr1 (14-192)||(35400043-35400221)
chr1 (14-192)||(35647568-35647746)
chr1 (14-192)||(47617437-47617615)
chr1 (14-192)||(5834346-5834524)
chr1 (14-186)||(4168403-4168575)
chr1 (14-192)||(3172742-3172920)
chr1 (14-188)||(5649257-5649431)
chr1 (14-186)||(19180087-19180259)
chr1 (14-186)||(21864824-21864996)
chr1 (14-180)||(12622677-12622843)
chr1 (21-186)||(153158-153323)
[»] chr5 (35 HSPs)
chr5 (14-186)||(15994393-15994565)
chr5 (14-186)||(31842987-31843159)
chr5 (14-192)||(23371531-23371709)
chr5 (14-192)||(23706378-23706556)
chr5 (14-192)||(36583603-36583781)
chr5 (14-192)||(42052390-42052568)
chr5 (14-192)||(9345562-9345740)
chr5 (14-192)||(15768362-15768540)
chr5 (14-192)||(24589158-24589336)
chr5 (14-192)||(30228550-30228728)
chr5 (14-192)||(37731056-37731234)
chr5 (14-192)||(6985320-6985498)
chr5 (14-192)||(14039619-14039797)
chr5 (14-192)||(14448130-14448308)
chr5 (14-192)||(14559162-14559340)
chr5 (14-192)||(17616641-17616819)
chr5 (14-192)||(17728498-17728676)
chr5 (14-192)||(22685025-22685203)
chr5 (14-192)||(23305868-23306046)
chr5 (14-192)||(24817945-24818123)
chr5 (14-192)||(27043313-27043491)
chr5 (14-192)||(27469583-27469761)
chr5 (14-192)||(31358115-31358293)
chr5 (14-192)||(39491991-39492169)
chr5 (14-192)||(35225084-35225262)
chr5 (14-188)||(40399989-40400163)
chr5 (14-186)||(5291677-5291849)
chr5 (14-186)||(27604556-27604728)
chr5 (14-186)||(39361270-39361442)
chr5 (18-186)||(31447510-31447678)
chr5 (14-180)||(22156074-22156240)
chr5 (14-128)||(36697196-36697310)
chr5 (53-186)||(1110298-1110431)
chr5 (99-186)||(20796728-20796815)
chr5 (141-192)||(36697344-36697395)
[»] chr6 (26 HSPs)
chr6 (14-186)||(12856101-12856273)
chr6 (14-186)||(26865944-26866116)
chr6 (14-192)||(3662490-3662668)
chr6 (14-192)||(17983618-17983796)
chr6 (14-192)||(25788874-25789052)
chr6 (14-192)||(27342873-27343051)
chr6 (14-192)||(27403613-27403791)
chr6 (14-192)||(16931540-16931718)
chr6 (14-192)||(12726317-12726495)
chr6 (14-192)||(26026565-26026743)
chr6 (14-186)||(9122013-9122185)
chr6 (14-186)||(27373935-27374107)
chr6 (14-186)||(27464288-27464460)
chr6 (16-186)||(25590362-25590532)
chr6 (14-180)||(32971358-32971524)
chr6 (14-180)||(34816655-34816821)
chr6 (14-128)||(27385646-27385760)
chr6 (14-128)||(27476059-27476173)
chr6 (14-128)||(4632120-4632234)
chr6 (14-128)||(32310543-32310657)
chr6 (97-186)||(7669375-7669464)
chr6 (100-192)||(4632035-4632127)
chr6 (100-192)||(27385561-27385653)
chr6 (100-192)||(27475974-27476066)
chr6 (23-185)||(12359298-12359460)
chr6 (141-192)||(32310691-32310742)
[»] chr8 (20 HSPs)
chr8 (14-192)||(209087-209265)
chr8 (14-192)||(242990-243168)
chr8 (14-192)||(722710-722888)
chr8 (14-192)||(796360-796538)
chr8 (14-192)||(15766081-15766259)
chr8 (14-192)||(15790218-15790396)
chr8 (14-192)||(29077888-29078066)
chr8 (14-192)||(32087203-32087381)
chr8 (14-192)||(3358139-3358317)
chr8 (14-192)||(9342312-9342490)
chr8 (14-192)||(36294107-36294285)
chr8 (14-192)||(13687498-13687676)
chr8 (14-192)||(36079112-36079290)
chr8 (14-186)||(26112470-26112642)
chr8 (14-186)||(19129940-19130112)
chr8 (14-180)||(6152296-6152462)
chr8 (14-128)||(44482389-44482503)
chr8 (100-192)||(44482304-44482396)
chr8 (111-185)||(19226134-19226208)
chr8 (111-185)||(30324259-30324333)
[»] scaffold0906 (1 HSPs)
scaffold0906 (14-186)||(3424-3596)
[»] scaffold0133 (1 HSPs)
scaffold0133 (14-192)||(32311-32489)
[»] scaffold0105 (1 HSPs)
scaffold0105 (14-192)||(46482-46660)
[»] scaffold1216 (1 HSPs)
scaffold1216 (16-186)||(269-439)
[»] scaffold0454 (2 HSPs)
scaffold0454 (14-128)||(2528-2642)
scaffold0454 (100-192)||(2443-2535)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-186)||(52481-52646)
[»] scaffold0747 (1 HSPs)
scaffold0747 (16-78)||(3567-3629)
[»] scaffold0398 (2 HSPs)
scaffold0398 (31-186)||(3258-3413)
scaffold0398 (111-186)||(11593-11668)
[»] scaffold0199 (2 HSPs)
scaffold0199 (100-186)||(23806-23892)
scaffold0199 (14-128)||(23885-23999)
[»] scaffold1002 (1 HSPs)
scaffold1002 (100-186)||(2863-2949)
[»] scaffold0251 (1 HSPs)
scaffold0251 (111-185)||(23758-23832)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 23758616 - 23758444
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23758616 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 23758517  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23758516 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 23758444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 12248329 - 12248501
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12248329 tggacatcactccttactatccagaagaagaatacatcacaagggctgctagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12248428  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||    
T  12248429 tcagaagaaggatgatcagatcaagcatctcttagaacagttgtttaagcaagcccaaccttagttgcacacc 12248501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9992794 - 9992966
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | | | || |||||||||||||||||    
T  9992794 tggacatcactcctttctatcccgaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaagaagaatgagagaaaaggatgagctact 9992893  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9992894 taagaagaaggatgatcatatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 9992966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 13382153 - 13382325
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  13382153 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 13382252  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13382253 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 13382325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 13392747 - 13392919
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  13392747 tggacatcactcctttctatccagaggaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 13392846  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13392847 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 13392919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 4745074 - 4744896
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  4745074 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 4744975  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  4744974 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 4744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 5512030 - 5511852
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  5512030 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 5511931  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5511930 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 5511852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 5546505 - 5546683
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  5546505 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 5546604  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5546605 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 5546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 6499864 - 6500036
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| | | | || |||||||||||||||||    
T  6499864 tggacatcactcctttctatcaagaagaagagtacatcacaagggctgcaagaattcatgctgggcttaaaagaagaatgagagaaaaggatgagctact 6499963  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  6499964 tcagaagaaggatgatcagatcaagtatcttttggaacagttgtataagcaagcccaaccttagttgcacacc 6500036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 5626861 - 5627039
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  5626861 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 5626960  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5626961 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 5627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 12295704 - 12295882
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  12295704 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 12295803  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  12295804 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 12295882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 16477615 - 16477437
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  16477615 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 16477516  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  16477515 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 16477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 41685010 - 41684832
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  41685010 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 41684911  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  41684910 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 41684832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 24661251 - 24661073
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  24661251 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24661152  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24661151 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 24661073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 5875146 - 5875324
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   ||||   | | | ||||||||||||||||||||    
T  5875146 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacaaagaatgagggaaaaggatgagctact 5875245  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5875246 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 5875324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 24392956 - 24393134
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||| |||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  24392956 tggacatcactcctttctattcagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24393055  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24393056 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 24393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 8776040 - 8775862
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  8776040 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 8775941  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  8775940 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 8775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 18485373 - 18485195
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  18485373 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 18485274  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  18485273 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 18485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 38196107 - 38195929
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  38196107 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 38196008  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  38196007 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 38195929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 39373437 - 39373259
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  39373437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 39373338  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  39373337 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 39373259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 6219538 - 6219712
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  6219538 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 6219637  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaa 188  Q
    | || |||||||||| || || ||||||||||| |||||| |||| ||||||||||||||||||||| |||||||    
T  6219638 taagcagaaggatgaacaaattaagtatctcttggaacagatgtacaagcaagcccaaccttagttgcacaccaa 6219712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 28323701 - 28323879
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || ||| |||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  28323701 tggacatcactcctttctatcctgaagaagagtatatctcaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 28323800  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  28323801 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 28323879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 16390427 - 16390597
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttc 115  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||  |||||| | | | || |||||||||||||||||||    
T  16390427 gacatcactcctttctatccagaagaagagtacatcacaagggcagccagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttc 16390526  T
Q  116 agaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  16390527 agaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 16390597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 19779773 - 19779601
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  19779773 tggacatcactcctttctatccagaagaagagtacatcataagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 19779674  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  19779673 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 19779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 37867838 - 37867666
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  37867838 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 37867739  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || ||| || |||| ||||||||||||||||||||| |||||    
T  37867738 taagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacacc 37867666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 37876356 - 37876184
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  37876356 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 37876257  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || ||| || |||| ||||||||||||||||||||| |||||    
T  37876256 taagaagaaggatgagcaaattaagtatcttttggaatagatgtacaagcaagcccaaccttagttgcacacc 37876184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 20682617 - 20682783
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||  ||||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  20682617 tggacatcactcctttctatacagaagaagagtacatcacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 20682716  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      ||||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  20682717 caagaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 20682783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 14466985 - 14466819
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| ||||||||||||||||||||    
T  14466985 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 14466886  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  14466885 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 14466819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 13123059 - 13122893
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||| ||||| | ||||| | ||| ||||||||||||||||||||    
T  13123059 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcattctgggtacaaaagaagattgagggaaaaggatgagctact 13122960  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  13122959 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 13122893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 10635920 - 10636014
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgag 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||    
T  10635920 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaaatgagagaaaaggatgag 10636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 10654248 - 10654336
Alignment:
Q  104 atgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  10654248 atgagctacttcagaagaaagatgatcaaatcaagtatctcttagaatagttgtataagcaagcccaaccttagttgcacacccaactc 10654336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 29470675 - 29470840
Alignment:
Q  21 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaag 120  Q
    |||||||| |||||||||||| ||  ||||  ||||| |||| |||||||||||||||   ||||| | | | || | ||||||||| | ||||||||||    
T  29470675 cactcctttctatccagaagatgaggacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 29470774  T
Q  121 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||| || || |||||||| || ||||||||||||||||||||| ||||||||||| |||||    
T  29470775 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacc 29470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 5e-86; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9907060 - 9907232
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9907060 tggacatcactccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9907159  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9907160 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagtaagcccaaccttagttgcacacc 9907232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9772231 - 9772403
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9772231 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 9772330  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9772331 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 9772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 40223651 - 40223479
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  40223651 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 40223552  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40223551 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 40223479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 43346717 - 43346539
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  43346717 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 43346618  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  43346617 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 43346539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 10268300 - 10268122
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  10268300 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 10268201  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  10268200 tcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 10268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 10278877 - 10278699
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  10278877 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 10278778  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  10278777 tcagaaaaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 10278699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 11404345 - 11404523
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  11404345 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 11404444  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11404445 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 11404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 35254351 - 35254173
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  35254351 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35254252  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  35254251 taagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 35254173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 35264960 - 35264782
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  35264960 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35264861  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  35264860 taagaagaaagatgaacagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 35264782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 27222738 - 27222560
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  27222738 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 27222639  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  27222638 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 27222560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 24337264 - 24337438
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  24337264 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 24337363  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaa 188  Q
      ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||||    
T  24337364 caagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccaa 24337438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 34803303 - 34803443
Alignment:
Q  46 tacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctct 145  Q
    ||||||||||||| ||| |||||||| |||||| ||||||| | | | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34803303 tacatcacaagggttgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgaactacttcagaagaaggatgatcagatcaagtatctct 34803402  T
Q  146 tagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  34803403 tagaacagttgtataagcaagcccaaccttagttgcacacc 34803443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 29245567 - 29245395
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  29245567 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 29245468  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  29245467 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 29245395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 43084009 - 43083837
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||  |||||| | | | || |||||||||||||||||    
T  43084009 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctact 43083910  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  43083909 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 43083837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 22959203 - 22959369
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  22959203 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22959302  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  22959303 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 22959369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 4211254 - 4211088
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||  | ||||| | | | || |||||||||||||||||    
T  4211254 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagagaaaaggatgagctact 4211155  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  4211154 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 4211088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 7e-85; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 466541 - 466719
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  466541 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 466640  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  466641 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 466719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 2715185 - 2715357
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  2715185 tggacatcactccttactatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 2715284  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2715285 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 2715357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 40051652 - 40051830
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  40051652 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaataatgagggaaaaggatgagctact 40051751  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  40051752 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 40051830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 1988903 - 1988725
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  1988903 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 1988804  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  1988803 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 1988725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 8011635 - 8011813
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  8011635 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 8011734  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  8011735 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 8011813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 9086592 - 9086414
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  9086592 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 9086493  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  9086492 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 9086414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 11097376 - 11097197
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaag-ggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctac 112  Q
    ||||||||||||||| ||||||||||||||| |||||||| || |||||| |||||||| |||||  ||||||| | | | |||||||||||||||||||    
T  11097376 tggacatcactcctttctatccagaagaagagtacatcactagtggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctac 11097277  T
Q  113 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11097276 ttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 11097197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 24736088 - 24735910
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  24736088 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 24735989  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24735988 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 24735910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 26698677 - 26698843
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  26698677 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 26698776  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26698777 tcagaagaaggatgatcagatcaagtatctcttagaatagttgtataagcaagcccaaccttagttg 26698843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 26399644 - 26399822
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  26399644 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 26399743  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  26399744 tcagaagaaggatgatcagatcaagtatctcttagaactgttgtataagcaagcccaaccttagttgcacacccaactc 26399822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 11006552 - 11006374
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  11006552 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 11006453  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  11006452 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 11006374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 42867193 - 42867015
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  42867193 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 42867094  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  42867093 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 42867015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 5686897 - 5686725
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  5686897 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 5686798  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  5686797 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 5686725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 9434601 - 9434429
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  9434601 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 9434502  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  9434501 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 9434429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 21001956 - 21002128
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  21001956 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 21002055  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  21002056 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 21002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 6876791 - 6876963
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  6876791 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 6876890  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  6876891 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 6876963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 19992966 - 19993136
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttc 115  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    ||||| | | | || |||||||||||| |||||     
T  19992966 gacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcatgctggattcaaaagaagaatgagagaaaaggatgagttactta 19993065  T
Q  116 agaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  19993066 agaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 19993136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 22090544 - 22090372
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  22090544 tggacatcactcctttctatccagaagaagagtacatcacaagggcaaccagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 22090445  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| |||||||||||||| |||||    
T  22090444 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 22090372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 168260 - 168094
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  168260 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 168161  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  168160 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 168094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 4213389 - 4213223
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||||| ||||||| | | | |||||||| |||||||||||    
T  4213389 tggacatcactcctttctatccagaagaagagtacattacaagggcatcaagaattcatgctgggtataaaagaagaatgagggaaaatgatgagctact 4213290  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      |||||||||||||  | ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  4213289 caagaagaaggatgagaaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 4213223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 17959623 - 17959789
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | | | ||||||||||||||||||||    
T  17959623 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagaatgagggaaaaggatgagctact 17959722  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  17959723 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 17959789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 8618755 - 8618589
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||  | | | ||||||||||||||||||||    
T  8618755 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaataagaatgagggaaaaggatgagctact 8618656  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  8618655 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 8618589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 451928 - 451756
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  451928 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 451829  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  451828 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 451756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 30935979 - 30936151
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30935979 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 30936078  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30936079 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 30936151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 21997768 - 21997596
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21997768 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgttgggcataaaaggaaattaagggaaaaggatgagctact 21997669  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21997668 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 21997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 55754716 - 55754894
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  55754716 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 55754815  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  55754816 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 55754894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36019687 - 36019509
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  36019687 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 36019588  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  36019587 tcagaagaaggatgatcagatcaagtatctcttagaacaattgtataagcaagcccaaccttagttgcacacccaactc 36019509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 10750056 - 10750234
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  10750056 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 10750155  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  10750156 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactc 10750234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 10963825 - 10964003
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  10963825 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 10963924  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  10963925 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtctaagcaagcccaaccttagttgcacacccaactc 10964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 18761969 - 18762147
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  18761969 tggacatcactcctttctatccagaagaggaatacatcacatgggctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 18762068  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  18762069 taagaagaaagatgaacaaatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 18762147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 24641667 - 24641489
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  24641667 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 24641568  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  24641567 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 24641489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 24026926 - 24027098
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  24026926 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 24027025  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      ||||||||||||| || ||||||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  24027026 caagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 24027098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 17919466 - 17919294
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  17919466 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 17919367  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      ||||||||||||| || ||||||||||| || |||||| |||| ||| ||||||||||||||||| |||||    
T  17919366 caagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagaaagcccaaccttagttgcacacc 17919294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 27658000 - 27657822
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | | | ||||||||||||||||||||    
T  27658000 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 27657901  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | | ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  27657900 taaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 27657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 19953843 - 19954015
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||||    
T  19953843 tggacatcactcctttctacccagaagaatagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaataagggaaaaggatgagctact 19953942  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      ||||||||||||| || || |||||||| || |||||| |||| ||||||| ||||||||||||| |||||    
T  19953943 caagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagtccaaccttagttgcacacc 19954015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 16257282 - 16257116
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  16257282 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 16257183  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  16257182 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 16257116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 40469482 - 40469652
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttc 115  Q
    |||| |||||| | ||||| ||||||||| ||||| ||||||||||| ||||||||||||||   |||||| | | | || |||||||||||||||||||    
T  40469482 gacaacactcccttctatctagaagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttc 40469581  T
Q  116 agaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||| || || ||||| || || |||||  |||||||||||||| ||||||||||| |||||    
T  40469582 agaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacacc 40469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 12731807 - 12731635
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12731807 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12731708  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12731707 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 12731635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 12742400 - 12742228
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12742400 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 12742301  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12742300 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 12742228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 7508597 - 7508419
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  7508597 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 7508498  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  7508497 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 7508419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 36245931 - 36246109
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  36245931 tggacatcactcctttctatccataagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 36246030  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36246031 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 36246109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 38096383 - 38096205
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  38096383 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 38096284  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  38096283 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 38096205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 51655375 - 51655553
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  51655375 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 51655474  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  51655475 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 51655553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 35400043 - 35400221
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  35400043 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35400142  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  35400143 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 35400221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 35647568 - 35647746
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  35647568 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35647667  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  35647668 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 35647746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 47617437 - 47617615
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  47617437 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 47617536  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  47617537 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 47617615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 5834524 - 5834346
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | | | ||||||||||||||||||||    
T  5834524 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 5834425  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  5834424 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 5834346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 4168575 - 4168403
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  4168575 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 4168476  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  4168475 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 4168403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 3172920 - 3172742
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | | | ||||||||||||||||||||    
T  3172920 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 3172821  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | | ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  3172820 taaaaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 3172742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 5649257 - 5649431
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  5649257 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 5649356  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaa 188  Q
      | ||||||||||| ||||| |||||||| || |||||| |||| ||||||||||||||||||||| |||||||    
T  5649357 caataagaaggatgagcagattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacaccaa 5649431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 19180259 - 19180087
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||| ||||||||| || || |||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  19180259 tggacatcactcctttctatctagaagaagagtatattacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 19180160  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  19180159 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 19180087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 21864996 - 21864824
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  21864996 tggacatcactcctttctatccagaagaagagtacatcacaagggcaacaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 21864897  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| |||||||||||||| |||||    
T  21864896 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttgcacacc 21864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 12622677 - 12622843
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||  | ||||| | | | ||||||||||||||||||||    
T  12622677 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctggatacaaaagaagaatgagggaaaaggatgagctact 12622776  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | |||||||| || || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  12622777 caaaaagaaggacgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 12622843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 153158 - 153323
Alignment:
Q  21 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaag 120  Q
    |||||||| |||||||||||| || |||||  ||||| |||| |||||||||||||||   ||||| | | | || | |||| |||| | ||||||||||    
T  153158 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaagaatgaacaacttcagaag 153257  T
Q  121 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||| || || |||||||| || ||||||||||||||||||||| ||||||||||| |||||    
T  153258 aaggatgagcaaattaagtatctattggaacagttgtataagcaagccaaaccttagttgcacacc 153323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 15994565 - 15994393
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15994565 tggacatctctccttactatccagaagaagagtacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaatgatgagctact 15994466  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15994465 tcagaagaaagatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 15994393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 31842987 - 31843159
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842987 tggacatcactccttactatccagaagaagagtacatcacaagagctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 31843086  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  31843087 tcagaagaaagatgatcagatcaagtatttcttagaatagttgtataagcaagcccaaccttagttgcacacc 31843159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 23371531 - 23371709
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  23371531 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 23371630  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  23371631 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 23371709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 23706378 - 23706556
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  23706378 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 23706477  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  23706478 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 23706556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36583781 - 36583603
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  36583781 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 36583682  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36583681 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 36583603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 42052390 - 42052568
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  42052390 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 42052489  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  42052490 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 42052568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 9345562 - 9345740
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  9345562 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 9345661  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  9345662 ttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 9345740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 15768362 - 15768540
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  15768362 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 15768461  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15768462 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 15768540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 24589336 - 24589158
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||| ||||||||||||||||    
T  24589336 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgaggtaaaaggatgagctact 24589237  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24589236 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 24589158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 30228728 - 30228550
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  30228728 tggacattactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 30228629  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  30228628 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 30228550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 37731234 - 37731056
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | || |||||||||||||||||    
T  37731234 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagagaaaaggatgagctact 37731135  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  37731134 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 37731056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 6985320 - 6985498
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  6985320 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 6985419  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6985420 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 6985498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 14039619 - 14039797
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  14039619 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14039718  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14039719 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 14039797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 14448308 - 14448130
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  14448308 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14448209  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14448208 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 14448130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 14559340 - 14559162
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  14559340 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 14559241  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14559240 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 14559162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 17616641 - 17616819
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | | | || |||||||||||||||||    
T  17616641 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 17616740  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17616741 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 17616819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 17728498 - 17728676
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | | | || |||||||||||||||||    
T  17728498 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 17728597  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17728598 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 17728676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 22685025 - 22685203
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  22685025 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 22685124  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22685125 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 22685203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 23305868 - 23306046
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  23305868 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 23305967  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  23305968 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 23306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 24818123 - 24817945
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||| ||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  24818123 tggacatcaatcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 24818024  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24818023 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 24817945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 27043491 - 27043313
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  27043491 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 27043392  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27043391 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27043313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 27469583 - 27469761
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  27469583 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 27469682  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27469683 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27469761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 31358115 - 31358293
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  | ||||| | | | || |||||||||||||||||    
T  31358115 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatacaaaagaagaatgagagaaaaggatgagctact 31358214  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  31358215 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 31358293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 39492169 - 39491991
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||| ||||||||||||||||    
T  39492169 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgaggaaaaaggatgagctact 39492070  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  39492069 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 39491991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 35225084 - 35225262
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| |||||||| |||||||||||||||  ||| | | | ||||||||||||||||||||    
T  35225084 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaaggattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 35225183  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  35225184 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 35225262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 40399989 - 40400163
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  40399989 tggacatcactcctttctatccagaagaagaatacattacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 40400088  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaa 188  Q
    | ||||||||||||| || || |||||||| || |||||| |||| |||||||||||||| |||||| |||||||    
T  40400089 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccctagttgcacaccaa 40400163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 5291849 - 5291677
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  5291849 tggacatcactcctttctatccagaagaagagtacattataagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 5291750  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| ||| || |||||||||||||||||||||||||| |||||    
T  5291749 taagaagaaggatgagcaaattaagtatctcttggaatagatgtataagcaagcccaaccttagttgcacacc 5291677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27604728 - 27604556
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  27604728 tggacatcactcctttctatccagaagaagagtacatcacaaggactgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 27604629  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  27604628 taagaagaaggatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 27604556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 39361270 - 39361442
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | ||||||||||||||||||||    
T  39361270 tggacatcactcctttctacccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagggaaaaggatgagctact 39361369  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
      ||||||| ||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  39361370 caagaagaatgatgagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 39361442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 31447510 - 31447678
Alignment:
Q  18 catcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcag 117  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||  |||||| | | | || |||||||||||||||||||||    
T  31447510 catcactcctttctatccagaagaagagtacattacaagggctgctagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctacttcag 31447609  T
Q  118 aagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||| || || |||||| | || |||||| |||||||||||||||||||||||||| |||||    
T  31447610 aagaaggatgagcaaattaagtatattttggaacagatgtataagcaagcccaaccttagttgcacacc 31447678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 22156074 - 22156240
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  22156074 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 22156173  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  22156174 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 22156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 36697196 - 36697310
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| || |||||    
T  36697196 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 36697295  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  36697296 tcagaagaaggatga 36697310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 1110431 - 1110298
Alignment:
Q  53 caagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaaca 152  Q
    ||||| |||| |||||||||||||||   ||||| | | | || | ||||||||| | |||||||||||||||||| || || |||||||| || |||||    
T  1110431 caaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaagaaggatgagcaaattaagtatctattggaaca 1110332  T
Q  153 gttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||| ||||||||||| |||||    
T  1110331 gttgtataagcaagccaaaccttagttgcacacc 1110298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 20796728 - 20796815
Alignment:
Q  99 aaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||| | |||||||||||||||||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||| |||||    
T  20796728 aaaggatgaacaacttcagaagaaggatgagcagattaaatatcttttggaacagatgtataagctagccaaaccttagttgcacacc 20796815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 36697344 - 36697395
Alignment:
Q  141 tctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  36697344 tctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 36697395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 2e-69; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 12856273 - 12856101
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  12856273 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 12856174  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12856173 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 12856101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 26866116 - 26865944
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  26866116 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 26866017  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26866016 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacc 26865944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 3662668 - 3662490
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  3662668 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 3662569  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3662568 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 3662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 17983618 - 17983796
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  17983618 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 17983717  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17983718 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 17983796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 25789052 - 25788874
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  25789052 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 25788953  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  25788952 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 25788874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 27343051 - 27342873
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  27343051 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 27342952  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27342951 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 27403791 - 27403613
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  27403791 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 27403692  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27403691 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 27403613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 16931718 - 16931540
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||| | | | | ||||||||||||||||||||    
T  16931718 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaacgaagaatgagggaaaaggatgagctact 16931619  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  16931618 tcagaagaaggatgatcagatcaagtatctcttagaacagtngtataagcaagcccaaccttagttgcacacccaactc 16931540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 12726317 - 12726495
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  12726317 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 12726416  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  12726417 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 12726495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 26026743 - 26026565
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  26026743 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 26026644  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  26026643 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 26026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9122013 - 9122185
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||||    
T  9122013 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtttaaaagaagaatgagagaaaaggatgagctact 9122112  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||||| || || ||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  9122113 taagaagaaggatgagcaaattaagtatctcttggaacagatgtataagcaagcccaaccttagttgcacacc 9122185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27374107 - 27373935
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  27374107 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 27374008  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||||||||| |||||    
T  27374007 tcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 27373935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27464460 - 27464288
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  27464460 tggacatcactcctttctatctagaagaagagtatatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 27464361  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||||||||| |||||    
T  27464360 tcagaagaaggatgatcaaattaagtaccttttggaacagatgtataagcaagcccaaccttagttgcacacc 27464288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 25590532 - 25590362
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttc 115  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||  |||||| |   | || || |||||||| || |||     
T  25590532 gacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaatacatgctgggtttaaaagaaggatgagagagaaggatgaacttctta 25590433  T
Q  116 agaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||| || || ||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  25590432 agaagaaggatgagcaaattaagtacctcttagaacagatgtataagcaagcccaaccttagttgcacacc 25590362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 32971358 - 32971524
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  32971358 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaatgatgagctact 32971457  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  32971458 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 32971524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 34816655 - 34816821
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| |||||||| |||||||||||    
T  34816655 tggacatcactcctttctatccagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaagatgagctact 34816754  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | ||||||||||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  34816755 caaaaagaaggatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 34816821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 27385760 - 27385646
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || ||||| || |||||    
T  27385760 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27385661  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  27385660 tcagaagaaggatga 27385646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 27476173 - 27476059
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || ||||| || |||||    
T  27476173 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaattcatgctgggcataagaggaagttaagagagaaggaagaactact 27476074  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  27476073 tcagaagaaggatga 27476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 4632234 - 4632120
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| || |||||    
T  4632234 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 4632135  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  4632134 tcagaagaaggatga 4632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 32310543 - 32310657
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| || |||||    
T  32310543 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 32310642  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  32310643 tcagaagaaggatga 32310657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 7669375 - 7669464
Alignment:
Q  97 gaaaaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||  ||||||||||||| || ||||||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  7669375 gaaaaggatgagctactcaagaagaaggatgagcaaatcaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 7669464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 4632127 - 4632035
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  4632127 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 4632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 27385653 - 27385561
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  27385653 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 27385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 27476066 - 27475974
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  27476066 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 27475974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 12359460 - 12359298
Alignment:
Q  23 ctccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaa 122  Q
    |||||| |||||||||||| || ||||   |||||||||  |||||||| || ||||  ||||| | ||| || | |||| ||||   ||||||||||||    
T  12359460 ctcctttctatccagaagatgattacacttcaagggctgatagaattcaagcagggctgaaaagcagattgagagcaaagaatgaagaacttcagaagaa 12359361  T
Q  123 ggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacac 185  Q
    |||||||||||| || ||||| || |||||| ||| ||||| |||| ||||||||||| ||||    
T  12359360 ggatgatcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 12359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 32310691 - 32310742
Alignment:
Q  141 tctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  32310691 tctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 32310742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 9e-66; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 209087 - 209265
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  209087 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 209186  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  209187 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 209265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 243168 - 242990
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  243168 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 243069  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  243068 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 242990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 722710 - 722888
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  722710 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 722809  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  722810 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 722888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 796538 - 796360
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  796538 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 796439  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  796438 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 15766081 - 15766259
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||| ||||||||||    
T  15766081 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaagaatgagctact 15766180  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15766181 ttagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 15766259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 15790218 - 15790396
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | | | ||||||||||||||||||||    
T  15790218 tggacatcactcctttctatccagaagaagagtacatcacaagggctgctagaattcaggctgggtataaaagaagaatgagggaaaaggatgagctact 15790317  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15790318 ttagaagaaggatgatcggatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 15790396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 29078066 - 29077888
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  29078066 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 29077967  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  29077966 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 29077888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 32087203 - 32087381
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||  ||||||| | | | ||||||||||||||||||||    
T  32087203 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatataaaagaagaatgagggaaaaggatgagctact 32087302  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  32087303 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 32087381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 3358139 - 3358317
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  3358139 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 3358238  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3358239 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 3358317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 9342490 - 9342312
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  9342490 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 9342391  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  9342390 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 9342312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36294285 - 36294107
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | || |||||||||||||||||    
T  36294285 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagagaaaaggatgagctact 36294186  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36294185 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 36294107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 13687498 - 13687676
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  13687498 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 13687597  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  13687598 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 13687676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36079290 - 36079112
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  36079290 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 36079191  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  36079190 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 36079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 26112642 - 26112470
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | || |||||||||||||||||    
T  26112642 tggacatcactcctttctatccagaagaagagtacatcacaagggctgcaagaattcatgctgggtataaaagaagaatgagagaaaaggatgagctact 26112543  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | || |||||||||| || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  26112542 taagcagaaggatgaacaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 26112470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 19130112 - 19129940
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||  |||||| | | | || |||||||||||||||||    
T  19130112 tggacatcactcctttctatccagaagaagagtacattacaagggctgcaagaattcatgttgggtttaaaagaagaatgagagaaaaggatgagctact 19130013  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    | ||||||||||| | || || |||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  19130012 taagaagaaggatcagcaaattaagtatcttttggaacagatgtacaagcaagcccaaccttagttgcacacc 19129940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 6152462 - 6152296
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||| ||||||||| |||||| |||||||  ||||||||||||||||| | ||||| | ||| ||||||||||||||||||||    
T  6152462 tggacatcactcctttctatcgagaagaagagtacatctcaagggcaacaagaattcatgctgggtacaaaagaagattgagggaaaaggatgagctact 6152363  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttg 180  Q
      | |||||| |||| || ||||||||||| || |||||| |||| |||||| ||||||||||||||    
T  6152362 caaaaagaagaatgagcaaatcaagtatctattggaacagatgtacaagcaaacccaaccttagttg 6152296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 44482503 - 44482389
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| || |||||    
T  44482503 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 44482404  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  44482403 tcagaagaaggatga 44482389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 44482396 - 44482304
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||| ||||| |    ||||||||||||| || | ||||||||||||||||||||| ||||| |||||    
T  44482396 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagctgaagaagcaagcccaaccttagttgcacacccaactc 44482304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 19226208 - 19226134
Alignment:
Q  111 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacac 185  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||| ||||    
T  19226208 acttcagaagaaggatgagcagattaaatatctattggaacagatgtctaagctagccaaaccttagttgcacac 19226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 30324259 - 30324333
Alignment:
Q  111 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacac 185  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||| ||||    
T  30324259 acttcagaagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 30324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 3424 - 3596
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||| |||||||| | ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  3424 tggatatcactcccttctacccagaggaagaatacatcacaagagctgcaagaattcatgctgggcataagagaaaattaagggaaaaggatgagctact 3523  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  3524 tcagaagaaggatgatcagatcagatatctcttagagcagttgtataagcaagcccaaccttagttgcacacc 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 32489 - 32311
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||| |||||   |||| | | | | ||||||||||||||||||||    
T  32489 tggacatcactcctttctatccagaagaagagtacatcactagggctgctagaattcaggctggatttaaacgaagaatgagggaaaaggatgagctact 32390  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  32389 tcaaaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgcacacccaactc 32311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 46482 - 46660
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| |||||| |||||||| || |||||||| ||||||||||||||||||||||||  ||| | | | ||||||||||||||||||||    
T  46482 tggacatcactcctttctatcctgaagaagagtatatcacaagagctgcaagaattcatgctgggcatgtaagaagaatgagggaaaaggatgagctact 46581  T
Q  114 tcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    | ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  46582 taagaagaaagatgaacagatcaagtatctcttagaacagctgtataagcaagcccaaccttagttgcacacccaactc 46660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 75; Significance: 9e-35; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 439 - 269
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttc 115  Q
    |||| |||||||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||   |||||| | | | || |||||||||||||||||||    
T  439 gacaacactcctttctatccataagaagagtacattacaagggctgctagaattcatgctggatttaaaagaagaatgagagaaaaggatgagctacttc 340  T
Q  116 agaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||| || || ||||| || || |||||  |||||||||||||| ||||||||||| |||||    
T  339 agaagaaggatgagcaaattaagtaccttttggaacaaatgtataagcaagccaaaccttagttgcacacc 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 2642 - 2528
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||| || |||||    
T  2642 tggacatcactcctttctatccagaggcagaatacatcacaagagctgcaagaatttatgctgggcataagaggaagttaagagagaaggaagaactact 2543  T
Q  114 tcagaagaaggatga 128  Q
    |||||||||||||||    
T  2542 tcagaagaaggatga 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 2535 - 2443
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacaccaaactc 192  Q
    ||||||||||||||||||||||||||||| ||||| |    |||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  2535 aaggatgagctacttcagaagaaggatgaacagattagacttctcttagaacagttgaagaagcaagcccaaccttagttgcacacccaactc 2443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 52481 - 52646
Alignment:
Q  21 cactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaag 120  Q
    |||||||| |||||||||||| || |||||  ||||| |||| |||||||||||||||   ||||| | | | || | ||||||||| | ||||||||||    
T  52481 cactcctttctatccagaagatgagtacatttcaaggactgctagaattcatgctgggttgaaaagtagactgagagcaaaggatgaacaacttcagaag 52580  T
Q  121 aaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||| || || |||||||| || |||||| |||||||||||| | ||||||||||| |||||    
T  52581 aaggatgagcaaattaagtatctattggaacagatgtataagcaagtcaaaccttagttgcacacc 52646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 3629 - 3567
Alignment:
Q  16 gacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctggg 78  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  3629 gacatcactcctttctatccagaagaagagtacatcacaagagctgcaagaatacatgctggg 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 3258 - 3413
Alignment:
Q  31 tatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctacttcagaagaaggatgatc 130  Q
    ||||||||||| || |||||  |||| ||||  |||||||| |||||||  ||||| | | |||| | | || |||| | |||||||||||||||||| |    
T  3258 tatccagaagatgattacatttcaagagctgatagaattcaagctgggctgaaaagaagactaagagcacagaatgaacaacttcagaagaaggatgagc 3357  T
Q  131 agatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||| || ||||| || |||||| ||||||||| |||| ||||||||||| |||||    
T  3358 agattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacc 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 11593 - 11668
Alignment:
Q  111 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||||||||||||| ||||| || ||||| || |||||| ||||||||| |||| ||||||||||| |||||    
T  11593 acttcagaagaaggatgagcagattaaatatctattggaacagatgtataagctagccaaaccttagttgcacacc 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 23892 - 23806
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    ||||||||||||||||||||||||||||| ||||| |   |||||||||| |||||  | || |||||||||||||||||| |||||    
T  23892 aaggatgagctacttcagaagaaggatgaacagattagacatctcttagagcagttaaagaaacaagcccaaccttagttgcacacc 23806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 23999 - 23885
Alignment:
Q  14 tggacatcactccttactatccagaagaagaatacatcacaagggctgcaagaattcatgctgggcataaaaggaaattaagggaaaaggatgagctact 113  Q
    |||| |||||||||| ||||||||| | ||| |||||||||||  |||| |||||||  ||||||||||| |||||  |||| || ||||| || |||||    
T  23999 tggatatcactcctttctatccagaggcagattacatcacaagatctgctagaattcgagctgggcataataggaagctaagagagaaggaagaactact 23900  T
Q  114 tcagaagaaggatga 128  Q
    |||  ||||||||||    
T  23899 tcatcagaaggatga 23885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 2863 - 2949
Alignment:
Q  100 aaggatgagctacttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacacc 186  Q
    |||||||| | |||||||||||||||||| ||||| || |||||  | |||||| ||| ||||| |||| ||||||||||| |||||    
T  2863 aaggatgaacaacttcagaagaaggatgagcagattaaatatctactggaacagatgtctaagctagccaaaccttagttgcacacc 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 23832 - 23758
Alignment:
Q  111 acttcagaagaaggatgatcagatcaagtatctcttagaacagttgtataagcaagcccaaccttagttgaacac 185  Q
    |||||| ||||||||||| ||||| || ||||| || |||||| ||| ||||| |||| ||||||||||| ||||    
T  23832 acttcaaaagaaggatgagcagattaaatatcttttggaacagatgtctaagctagccaaaccttagttgcacac 23758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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