View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10145A_low_89 (Length: 382)

Name: NF10145A_low_89
Description: NF10145A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10145A_low_89
NF10145A_low_89
[»] scaffold0510 (2 HSPs)
scaffold0510 (46-370)||(1752-2086)
scaffold0510 (46-321)||(8050-8325)
[»] chr3 (20 HSPs)
chr3 (46-325)||(32747152-32747431)
chr3 (46-325)||(6037063-6037343)
chr3 (46-325)||(24179856-24180135)
chr3 (122-359)||(25893965-25894214)
chr3 (122-325)||(9569755-9569960)
chr3 (129-325)||(9576265-9576462)
chr3 (122-325)||(27501190-27501394)
chr3 (173-325)||(4310754-4310906)
chr3 (122-325)||(23069272-23069477)
chr3 (80-316)||(10940507-10940744)
chr3 (77-318)||(43995853-43996096)
chr3 (91-318)||(47441615-47441843)
chr3 (152-314)||(43932358-43932521)
chr3 (174-293)||(20650357-20650477)
chr3 (173-285)||(2786532-2786645)
chr3 (326-373)||(4310929-4310977)
chr3 (328-370)||(23069194-23069236)
chr3 (122-163)||(9576228-9576270)
chr3 (213-261)||(460794-460842)
chr3 (46-96)||(27501115-27501165)
[»] chr1 (24 HSPs)
chr1 (46-325)||(1175377-1175655)
chr1 (60-373)||(23761525-23761835)
chr1 (46-356)||(26622213-26622523)
chr1 (46-321)||(41304689-41304964)
chr1 (130-325)||(45023318-45023513)
chr1 (122-373)||(28996734-28996994)
chr1 (122-373)||(29002450-29002710)
chr1 (122-325)||(45016576-45016780)
chr1 (122-325)||(42092691-42092895)
chr1 (122-325)||(6239439-6239643)
chr1 (122-373)||(43687356-43687619)
chr1 (122-325)||(39052541-39052745)
chr1 (122-325)||(39058913-39059117)
chr1 (122-321)||(35085788-35085989)
chr1 (49-316)||(9869888-9870156)
chr1 (46-321)||(44242143-44242419)
chr1 (130-373)||(4600256-4600507)
chr1 (152-316)||(1115258-1115423)
chr1 (152-315)||(32798516-32798679)
chr1 (77-315)||(31073133-31073368)
chr1 (172-287)||(44917212-44917327)
chr1 (46-96)||(42092920-42092970)
chr1 (46-96)||(45016805-45016855)
chr1 (141-253)||(9316777-9316889)
[»] chr5 (21 HSPs)
chr5 (46-325)||(42151602-42151881)
chr5 (122-325)||(25893882-25894086)
chr5 (130-325)||(40957859-40958054)
chr5 (46-373)||(5876941-5877280)
chr5 (46-325)||(29413827-29414106)
chr5 (130-373)||(22314553-22314807)
chr5 (49-325)||(22360746-22361022)
chr5 (122-325)||(2958655-2958859)
chr5 (122-325)||(2967124-2967328)
chr5 (122-325)||(29974754-29974958)
chr5 (122-325)||(29981257-29981461)
chr5 (122-325)||(30021684-30021888)
chr5 (122-321)||(4974353-4974554)
chr5 (132-325)||(34356499-34356692)
chr5 (132-325)||(34358290-34358483)
chr5 (152-318)||(12505043-12505209)
chr5 (152-314)||(2439580-2439743)
chr5 (154-261)||(30579487-30579594)
chr5 (337-370)||(4974289-4974322)
chr5 (152-266)||(2823099-2823214)
chr5 (46-96)||(25893744-25893794)
[»] chr2 (29 HSPs)
chr2 (46-325)||(16816497-16816775)
chr2 (46-325)||(16855654-16855932)
chr2 (46-373)||(21067086-21067415)
chr2 (122-373)||(36781417-36781679)
chr2 (122-325)||(15853333-15853537)
chr2 (122-325)||(42930615-42930818)
chr2 (122-325)||(43268643-43268847)
chr2 (46-373)||(2020606-2020945)
chr2 (122-370)||(21341174-21341422)
chr2 (181-325)||(29485678-29485822)
chr2 (122-325)||(2158406-2158610)
chr2 (122-325)||(2164822-2165026)
chr2 (122-325)||(12951593-12951797)
chr2 (122-325)||(34840479-34840683)
chr2 (122-325)||(45012778-45012982)
chr2 (130-325)||(34834044-34834239)
chr2 (122-325)||(13901196-13901395)
chr2 (173-264)||(11909264-11909356)
chr2 (46-96)||(2158635-2158685)
chr2 (46-96)||(2165051-2165101)
chr2 (46-96)||(12951822-12951872)
chr2 (46-96)||(13901121-13901171)
chr2 (50-96)||(29485868-29485914)
chr2 (46-96)||(34833960-34834010)
chr2 (46-96)||(34840404-34840454)
chr2 (46-96)||(43268872-43268922)
chr2 (46-96)||(45013007-45013057)
chr2 (130-170)||(11909160-11909200)
chr2 (213-261)||(34744644-34744692)
[»] scaffold0053 (3 HSPs)
scaffold0053 (46-318)||(71228-71500)
scaffold0053 (122-325)||(50485-50689)
scaffold0053 (46-96)||(50714-50764)
[»] chr7 (45 HSPs)
chr7 (46-373)||(21643243-21643579)
chr7 (60-325)||(19090578-19090843)
chr7 (46-325)||(36876338-36876617)
chr7 (122-325)||(14288503-14288707)
chr7 (46-325)||(14299688-14299967)
chr7 (122-325)||(9642150-9642354)
chr7 (51-325)||(8192117-8192390)
chr7 (130-325)||(23613171-23613366)
chr7 (51-325)||(8184557-8184830)
chr7 (174-325)||(6020140-6020291)
chr7 (122-373)||(15949881-15950135)
chr7 (46-322)||(3923255-3923531)
chr7 (173-373)||(15915360-15915562)
chr7 (122-325)||(1379742-1379946)
chr7 (122-325)||(5049135-5049339)
chr7 (122-325)||(6796233-6796437)
chr7 (122-325)||(2447443-2447647)
chr7 (122-325)||(8141683-8141887)
chr7 (130-325)||(26602768-26602964)
chr7 (122-325)||(48346322-48346521)
chr7 (122-325)||(48352706-48352905)
chr7 (152-313)||(37026511-37026673)
chr7 (168-373)||(22853497-22853703)
chr7 (152-313)||(39433693-39433854)
chr7 (222-356)||(1947980-1948115)
chr7 (152-315)||(33849905-33850069)
chr7 (46-96)||(8184489-8184539)
chr7 (46-96)||(8192049-8192099)
chr7 (47-96)||(37027168-37027217)
chr7 (49-96)||(15953492-15953539)
chr7 (46-96)||(1379971-1380021)
chr7 (46-96)||(1386075-1386125)
chr7 (46-96)||(2447672-2447722)
chr7 (46-96)||(5049060-5049110)
chr7 (46-96)||(6020030-6020080)
chr7 (46-96)||(6796462-6796512)
chr7 (46-96)||(8141608-8141658)
chr7 (47-96)||(22853274-22853321)
chr7 (47-89)||(39434057-39434099)
chr7 (46-96)||(48346247-48346297)
chr7 (46-96)||(48352631-48352681)
chr7 (49-102)||(15925160-15925213)
chr7 (49-93)||(26603001-26603045)
chr7 (332-368)||(33850096-33850132)
chr7 (271-315)||(45434369-45434413)
[»] scaffold0513 (1 HSPs)
scaffold0513 (46-325)||(11304-11583)
[»] chr4 (18 HSPs)
chr4 (122-325)||(55462007-55462211)
chr4 (122-325)||(13594891-13595095)
chr4 (46-325)||(37367470-37367749)
chr4 (130-325)||(8104664-8104859)
chr4 (51-325)||(27591094-27591368)
chr4 (46-325)||(30239009-30239288)
chr4 (51-325)||(17457639-17457912)
chr4 (122-325)||(7781107-7781312)
chr4 (122-325)||(41373781-41373985)
chr4 (122-325)||(37355569-37355774)
chr4 (173-321)||(16406132-16406281)
chr4 (116-293)||(5659761-5659939)
chr4 (182-287)||(30210841-30210947)
chr4 (213-314)||(36754132-36754233)
chr4 (46-96)||(27591386-27591436)
chr4 (46-96)||(17457930-17457980)
chr4 (143-261)||(40975903-40976021)
chr4 (46-96)||(41374010-41374060)
[»] chr6 (32 HSPs)
chr6 (46-325)||(4737539-4737818)
chr6 (130-322)||(34710801-34710993)
chr6 (46-325)||(32327641-32327920)
chr6 (122-325)||(4187480-4187684)
chr6 (174-325)||(31548690-31548841)
chr6 (46-321)||(7061663-7061938)
chr6 (46-321)||(7068849-7069124)
chr6 (46-296)||(4668556-4668806)
chr6 (122-325)||(9863995-9864200)
chr6 (122-325)||(1427646-1427850)
chr6 (122-325)||(4019458-4019662)
chr6 (122-325)||(4025884-4026088)
chr6 (122-325)||(4717763-4717967)
chr6 (122-325)||(34649595-34649799)
chr6 (122-325)||(34656046-34656250)
chr6 (174-325)||(31128575-31128726)
chr6 (122-321)||(13671048-13671249)
chr6 (130-321)||(21261815-21262007)
chr6 (168-313)||(27670837-27670982)
chr6 (91-288)||(1166694-1166891)
chr6 (46-96)||(4668493-4668543)
chr6 (46-96)||(4737476-4737526)
chr6 (46-96)||(1427571-1427621)
chr6 (46-96)||(4019383-4019433)
chr6 (46-96)||(4025809-4025859)
chr6 (46-96)||(4717688-4717738)
chr6 (46-96)||(21261731-21261781)
chr6 (46-96)||(31548890-31548940)
chr6 (46-96)||(34649824-34649874)
chr6 (46-96)||(34656275-34656325)
chr6 (47-96)||(27671123-27671172)
chr6 (173-261)||(14121808-14121896)
[»] chr8 (20 HSPs)
chr8 (51-325)||(36424894-36425168)
chr8 (46-325)||(36020896-36021175)
chr8 (122-325)||(6463799-6464003)
chr8 (122-325)||(7312142-7312346)
chr8 (181-325)||(11357467-11357611)
chr8 (122-325)||(8012543-8012747)
chr8 (122-325)||(36004707-36004911)
chr8 (122-370)||(16709904-16710163)
chr8 (122-325)||(36076760-36076964)
chr8 (122-370)||(1238942-1239201)
chr8 (152-293)||(12769713-12769855)
chr8 (156-287)||(15013211-15013343)
chr8 (154-315)||(45067692-45067854)
chr8 (156-230)||(15013432-15013507)
chr8 (46-96)||(12769882-12769932)
chr8 (46-96)||(36424826-36424876)
chr8 (46-96)||(6463724-6463774)
chr8 (46-96)||(8012468-8012518)
chr8 (46-96)||(36004632-36004682)
chr8 (46-96)||(36076989-36077039)
[»] scaffold0475 (2 HSPs)
scaffold0475 (46-296)||(8605-8855)
scaffold0475 (46-96)||(8868-8918)
[»] scaffold0043 (2 HSPs)
scaffold0043 (122-325)||(4228-4432)
scaffold0043 (46-96)||(4153-4203)
[»] scaffold0060 (1 HSPs)
scaffold0060 (152-287)||(15980-16116)
[»] scaffold0343 (2 HSPs)
scaffold0343 (168-271)||(3501-3604)
scaffold0343 (268-312)||(3442-3486)
[»] scaffold1487 (1 HSPs)
scaffold1487 (129-261)||(1346-1478)


Alignment Details
Target: scaffold0510 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 46 - 370
Target Start/End: Complemental strand, 2086 - 1752
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2086 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagttttacattcgccctcaactcgcatggcgagtggaaggc 1987  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  1986 gagcttactcgccatggcgaatgaatttactcgcgaggcgagttaaggcggtttagtctctaacagctgacgtggcacaaacccaatggcgaaggaacct 1887  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc-----------atacttagttt 334  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||           |||||||||||    
T  1886 caactcgccatggcgaatgaatgagctcgcgaggcgagtttatgcagagtcagaattctataaatagcccactcaaccatttcattgatatacttagttt 1787  T
Q  335 tatcttagtttttcatagtttttcacttgtaatatt 370  Q
    | ||| ||||||| ||||||||||||||||||||||    
T  1786 t-tctgagtttttgatagtttttcacttgtaatatt 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 321
Target Start/End: Original strand, 8050 - 8325
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8050 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 8149  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||  |||| || ||||||||||| |||||||||||||||| |   |||||| ||| |||||||||||||||||| ||||||||||    
T  8150 gagcatactcgccatggagaatggatgtactcgcgaggggagttagggcggtttaactcttcacagatgatgtggcacaaacccaatggtgaaggaacct 8249  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| | || |||||||||||||||||||||| ||||    
T  8250 caactcgccatggcgaatgaaggagctcgcgaggcgatttgatgctgaatcagaattctataaatagcccagtcaa 8325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 32747431 - 32747152
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  32747431 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttatcattcgccctcaactcgcatggcgagtggaaggc 32747332  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32747331 gagcttactctccatggcgaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 32747232  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  32747231 caactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 32747152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 6037343 - 6037063
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||   ||| | |  ||||||  ||||  ||||||||| |||||||||||||    
T  6037343 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagaatgcaacaaaatttaca--cgccaccaactcgcaatggcgagtggaag 6037246  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaa 242  Q
    |||||||||||||||||||  | || | | |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  6037245 gcgagcttactcgccatggtgagtggaatgactcgcgaggcgagctagggcggtttagccccctcacagctgacgtggcacaaacccaatggcgaaggaa 6037146  T
Q  243 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6037145 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccat 6037063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 24180135 - 24179856
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  24180135 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 24180037  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24180036 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 24179937  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  24179936 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 24179856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 122 - 359
Target Start/End: Complemental strand, 25894214 - 25893965
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25894214 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgcttttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 25894115  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  25894114 cacaaacccaatgaagaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 25894015  T
Q  321 acc-----------atacttagttttatcttagtttttcatagtttttca 359  Q
    |||           |||||||||||| |||||||||||||||||||||||    
T  25894014 accatttcattgtgatacttagttttctcttagtttttcatagtttttca 25893965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 9569755 - 9569960
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcaca-gctgacgtg 219  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| | || ||| ||||||||||||||| | ||||||||||||||||| | |||||||||    
T  9569755 caactcgcaatggcgagtggaaggcgagcttactcaccatggcgagtggattgactcgcgaggcgagtgaaggcggtttagcctctcaaatgctgacgtg 9569854  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||| ||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  9569855 gcacaaacccaatggggaagaaacttcaactcgccatggcgaaggaaggagctcgcgaggcgagttagtacagaatcagaattctataaatagcccactc 9569954  T
Q  320 aaccat 325  Q
    ||||||    
T  9569955 aaccat 9569960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 9576265 - 9576462
Alignment:
Q  129 catggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcaca-gctgacgtggcacaaac 227  Q
    ||||||||||||||||||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||||| | |||||||||||||||||    
T  9576265 catggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctctcaaatgctgacgtggcacaaac 9576364  T
Q  228 ccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||| |||| ||| ||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  9576365 ccaatggggaagaaacttcaactcgccatggcaaaggaaggagctcgcgaggcgagttagtacagaatcagaattctataaatagcccactcaaccat 9576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 27501190 - 27501394
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  27501190 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 27501289  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||   ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  27501290 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgatgcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 27501389  T
Q  321 accat 325  Q
    |||||    
T  27501390 accat 27501394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 173 - 325
Target Start/End: Original strand, 4310754 - 4310906
Alignment:
Q  173 tactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 271  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||  |||    
T  4310754 tactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtggcacaaacccaatggggaagaaacttcaactcgcca-ggcgaatgaagtagc 4310852  T
Q  272 tcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||| |||||||||  || |||| |||||||||||||||||||||||||||||||    
T  4310853 tcgtgaggcgagtgcatgcagactcagaattctataaatagcccactcaaccat 4310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 23069477 - 23069272
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  | |||||||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||| ||    
T  23069477 caactcgcaatggcgagtagaaggcgagtttggttgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacatg 23069378  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    |  |||||||||||| |||| ||| ||||||||||||||||||||||  ||||||| ||||||||  || |||| |||||||||||||||||||||||||    
T  23069377 gttcaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcaaggcgagtgaatgcagactcagaattctataaatagcccactc 23069278  T
Q  320 aaccat 325  Q
    ||||||    
T  23069277 aaccat 23069272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 316
Target Start/End: Original strand, 10940507 - 10940744
Alignment:
Q  80 aaggtgagcaattccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcg 178  Q
    |||| |||||||||||| |||||  |||||| ||  |||||||||||| ||  |||||||| |||||||||  |||||| ||||| | |||||||| |||    
T  10940507 aaggcgagcaattccagagagcatcagtttttcacacgccctcaactcacaacggcgagtgaaaggcgagca-actcgcaatggcgagtgaatttaatcg 10940605  T
Q  179 cgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaat-gaatgagctcgcg 276  Q
     |||||||||||||||||  ||  || |||| ||  |||||||| |||||  ||||| |||| ||| ||||||||||||||||||| || | | ||||||    
T  10940606 tgaggcgagttagggcggcctaaactcctcaaaggcgacgtggctcaaacttaatggtgaagaaacatcaactcgccatggcgaatagagtta-ctcgcg 10940704  T
Q  277 aggcgagttgatacagagtcagaattctataaatagccca 316  Q
    |||||||||||| ||||   ||||||||||||||||||||    
T  10940705 aggcgagttgatgcagatcaagaattctataaatagccca 10940744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 318
Target Start/End: Complemental strand, 43996096 - 43995853
Alignment:
Q  77 tcaaaggtgagcaa-ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaattta 174  Q
    ||||||| |||||| |||||| |||||  |||||| ||  |||||||||||||||  ||||| | ||||||||||  ||||||  |||  | || |||||    
T  43996096 tcaaaggcgagcaagttccagagagcatcagtttttcacacgccctcaactcgcaaaggcgaattgaaggcgagca-actcgcactggtgagtgcattta 43995998  T
Q  175 ctcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 273  Q
    ||||||||||||||||||||||| ||  ||| ||| || ||||||||| |||||||| ||| |||| |||||||||||||||| |||| ||||    |||    
T  43995997 ctcgcgaggcgagttagggcggtctaaactcctcaaaggtgacgtggctcaaacccactggtgaagtaacctcaactcgccattgcgagtgaagttactc 43995898  T
Q  274 gcgaggcgagttgatacagagtcagaattctataaatagcccact 318  Q
    |||||||||||| || ||||    |||| ||||||||||||||||    
T  43995897 gcgaggcgagttaatgcagaacatgaatcctataaatagcccact 43995853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 318
Target Start/End: Complemental strand, 47441843 - 47441615
Alignment:
Q  91 ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagtt 189  Q
    |||||| |||||  |||||| ||  |||||||||||| ||  ||||| ||||||||||||  |||||| ||||| | || |||||||| | |||||||||    
T  47441843 ttccagagagcatcagtttttcacacgccctcaactcccaaaggcgaatggaaggcgagca-actcgcaatggcgagtgcatttactcacaaggcgagtt 47441745  T
Q  190 agggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgat 288  Q
    ||||||   ||   || ||| || ||||||||| |||||||| ||| |||| |||||||||||||||| |||||||||    ||||||||||||||||||    
T  47441744 agggcgacctaaattcctcaaagatgacgtggctcaaacccagtggtgaagtaacctcaactcgccattgcgaatgaagttactcgcgaggcgagttgat 47441645  T
Q  289 acagagtcagaattctataaatagcccact 318  Q
     ||||    |||||||||||||||||||||    
T  47441644 gcagaacatgaattctataaatagcccact 47441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 43932521 - 43932358
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||| ||||| | |||| ||||||| |||||||||||||||||  ||  ||| | | || ||||||||| |||||  ||||| |||| ||| ||||||    
T  43932521 actcgcaatggcgagtgaaattactcgtgaggcgagttagggcggcctaaactccttagaggtgacgtggctcaaacttaatggtgaagaaacatcaact 43932422  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcc 314  Q
    |||||||||||||| |    |||||||||||||||||| ||||   ||||||||||||||||||    
T  43932421 cgccatggcgaatggagttactcgcgaggcgagttgatgcagatcaagaattctataaatagcc 43932358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 20650357 - 20650477
Alignment:
Q  174 actcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagct 272  Q
    ||||||||||||||||||||||| | |  ||| ||| || ||||||| |||||||||| | | |||| |||||||||||| |||||||||||||    ||    
T  20650357 actcgcgaggcgagttagggcggctaaatctcctcagaggtgacgtgtcacaaacccactagtgaagtaacctcaactcggcatggcgaatgaagctact 20650456  T
Q  273 cgcgaggcgagttgatacaga 293  Q
    |||||||||||||||| ||||    
T  20650457 cgcgaggcgagttgatgcaga 20650477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 2786645 - 2786532
Alignment:
Q  173 tactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 271  Q
    |||| ||||||||||||||||||| | |  ||| ||| ||||||||||||| ||||||| ||| |||| ||| |||||||||||||||||||| ||   |    
T  2786645 tacttgcgaggcgagttagggcggctaaaactcctcaaagctgacgtggcagaaacccactggtgaagaaacatcaactcgccatggcgaatgcatttac 2786546  T
Q  272 tcgcgaggcgagtt 285  Q
    | ||||||||||||    
T  2786545 ttgcgaggcgagtt 2786532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 4310929 - 4310977
Alignment:
Q  326 acttagtttt-atcttagtttttcatagtttttcacttgtaatattctt 373  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4310929 acttagttttgatcttagtttttcatagtttttcacttgtaatattctt 4310977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 23069236 - 23069194
Alignment:
Q  328 ttagttttatcttagtttttcatagtttttcacttgtaatatt 370  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  23069236 ttagttttctcttagtttttcatagtttttcacttgtaatatt 23069194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 9576228 - 9576270
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggc 163  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  9576228 caactcgcaatggcgagtggaaggcgagcttactcgccatggc 9576270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 460794 - 460842
Alignment:
Q  213 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 261  Q
    |||||||||| |||||||||||||||| ||  |||||||||||||||||    
T  460794 tgacgtggcaaaaacccaatggcgaagcaaggtcaactcgccatggcga 460842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 27501115 - 27501165
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  27501115 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 27501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 1175655 - 1175377
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1175655 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 1175557  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  1175556 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 1175457  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  1175456 caactcgccatggcgaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 1175377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 60 - 373
Target Start/End: Original strand, 23761525 - 23761835
Alignment:
Q  60 actcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggcgagcttactcgcca 159  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||| |||    
T  23761525 actcgccatggcgagcttcaaaggcgagcaattccagggagcaccagttttt-attcgccctcaactcgcatggcgagtggaaggtgagcttactcacca 23761623  T
Q  160 tggcaaatgaatttactcgcgaggcgagttagggcggt-ttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatgg 258  Q
    |||| |||| |||||||||||||||||||||||||||| |||  || ||| || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  23761624 tggcgaatggatttactcgcgaggcgagttagggcggtcttaagct-tcatagttgacgtggcacaaacccaatggtgaagtaacctcaactcgccatgg 23761722  T
Q  259 cgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttagttttatcttagtttttcatagtttttc 358  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||||    
T  23761723 cgaatgaatgagctcgcgaggcgagtggatgcagagtcaaaattctataaatagcccactcaaacatacttag-ttaatcttagtttttgatag-ttttc 23761820  T
Q  359 acttgtaatattctt 373  Q
    |||||||| ||||||    
T  23761821 acttgtaacattctt 23761835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 46 - 356
Target Start/End: Complemental strand, 26622523 - 26622213
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| | | |||| ||||||||||||||||||||||||||||||||||    
T  26622523 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaatttcagggagccccaatttttcattcgccctcaactcgcatggcgagtggaaggc 26622424  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||| |||| || ||||||||||| ||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  26622423 gagcatactcgccatggcgaatggatgtactcgcgaggtgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 26622324  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttag-ttttatcttagtt 344  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||  | || |||||||||||||    
T  26622323 caactcaccatggcgaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat-ttcagtttttatcttagtt 26622225  T
Q  345 tttcatagtttt 356  Q
    ||||||| ||||    
T  26622224 tttcatactttt 26622213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 321
Target Start/End: Original strand, 41304689 - 41304964
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  41304689 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 41304788  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||  |||| || ||||||||||| |||||||||||||||| |   |||||| ||| |||||||||||||||||| ||||||||||    
T  41304789 gagcatactcgccatggagaatggatgtactcgcgaggggagttagggcggtttaactcttcacagatgatgtggcacaaacccaatggtgaaggaacct 41304888  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| | || |||||||||||||||||||||| ||||    
T  41304889 caactcgccatggcgaatgaaggagctcgcgaggcgatttgatgctgaatcagaattctataaatagcccagtcaa 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 45023513 - 45023318
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45023513 atggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 45023414  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  45023413 aatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 45023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 122 - 373
Target Start/End: Complemental strand, 28996994 - 28996734
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||| | ||||  | |||||||||||||||| ||||||||||| |   |||||| ||||||||    
T  28996994 caactcgcaatggcgagtggaaggcgagccaactcgccatgacgaatgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtgg 28996895  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28996894 cacaaacccaatggtgaaggaacttcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaatagcccactca 28996795  T
Q  321 acc----------atacttagttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    |||          |||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  28996794 accatttcattgaatacttagtttt-tctgagtttttcata-tttttcacttgtaatattctt 28996734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 122 - 373
Target Start/End: Complemental strand, 29002710 - 29002450
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||| | ||||  | |||||||||||||||| ||||||||||| |   |||||| ||||||||    
T  29002710 caactcgcaatggcgagtggaaggcgagccaactcgccatgacgaatgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtgg 29002611  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29002610 cacaaacccaatggtgaaggaactccaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaatagcccactca 29002511  T
Q  321 acc----------atacttagttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    |||          |||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  29002510 accatttcattgaatacttagtttt-tctgagtttttcata-tttttcacttgtaatattctt 29002450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 45016780 - 45016576
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  45016780 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 45016681  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  45016680 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 45016581  T
Q  321 accat 325  Q
    |||||    
T  45016580 accat 45016576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 42092895 - 42092691
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  42092895 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 42092796  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||| ||||||||||    
T  42092795 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaagagcccactca 42092696  T
Q  321 accat 325  Q
    |||||    
T  42092695 accat 42092691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 6239643 - 6239439
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  6239643 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 6239544  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  6239543 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 6239444  T
Q  321 accat 325  Q
    |||||    
T  6239443 accat 6239439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 122 - 373
Target Start/End: Complemental strand, 43687619 - 43687356
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  |||||| ||| |  |||  |||||||||||||||||||||||||||| || |||||| |||||||||    
T  43687619 caactcgcaatggcgagtagaaggcgagtttgttcgccacggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtg 43687520  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  ||  ||| |||||||||||||||||||||||||    
T  43687519 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgtagattcagaattctataaatagcccactc 43687420  T
Q  320 aacc-----------atacttagttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    ||||           |||||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  43687419 aaccatttcagatagatacttagttttctctgagtttttcata-cttttcacttgtaatattctt 43687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 39052541 - 39052745
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  ||||||||||    
T  39052541 caactcgcagtggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtgg 39052640  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||    
T  39052641 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactca 39052740  T
Q  321 accat 325  Q
    |||||    
T  39052741 accat 39052745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 39058913 - 39059117
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  ||||||||||    
T  39058913 caactcgcagtggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtgg 39059012  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| ||||||||||||||||||    
T  39059013 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactca 39059112  T
Q  321 accat 325  Q
    |||||    
T  39059113 accat 39059117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 122 - 321
Target Start/End: Complemental strand, 35085989 - 35085788
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| |||||||||  |  |||||||||||| || |  ||||||||||||||||||||| |||||| || |||||| | |||||||    
T  35085989 caactcgcaatggcgagtagaaggcgagtatgttcgccatggcaagtgcaagtactcgcgaggcgagttagggtggtttaagcttctcactgatgacgtg 35085890  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    |||||||| |||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||| ||| |||| | ||||||||||||||||| |||||    
T  35085889 gcacaaactcaatggtgaaggaactccaactcgccatggcgaatgaaggagctcgcgaggcgagtggatgcagatttagaattctataaatagctcactc 35085790  T
Q  320 aa 321  Q
    ||    
T  35085789 aa 35085788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 316
Target Start/End: Complemental strand, 9870156 - 9869888
Alignment:
Q  49 actcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 147  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||||  ||||  ||   | ||  ||||  ||||||||| |||||||| ||||||||    
T  9870156 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattccagtaagcaacagagat-cacacgccaccaactcgcaatggcgagtagaaggcga 9870058  T
Q  148 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctc 246  Q
        |||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||| | | || | |||||||||||| ||||||| |||| ||| ||    
T  9870057 ctgaactcgccatggcgaatgaatgtactcgcaaggcgagttagggcggtttagactccttagaggttacgtggcacaaaaccaatggtgaagaaacttc 9869958  T
Q  247 aactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagccca 316  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||   |||||| |||||||||||||    
T  9869957 aactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaacgagaattttataaatagccca 9869888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 321
Target Start/End: Complemental strand, 44242419 - 44242143
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||| ||||||||||||||| |||||||||  |||||| ||||||||||||  |||| | |   || ||  ||||  ||||||||| ||||||||  |||    
T  44242419 atcattcgcctccaactcgccatggcgagcagcaaaggcgagcaattccagtaagcaacaaagattgca--cgccaccaactcgcaatggcgagtaaaag 44242322  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaa 242  Q
    |||||  |  |||||||||| | || |  |||||| ||||||||||||||||||||| || |||||| | |||||||||||||||||||||| |||||||    
T  44242321 gcgagtctgttcgccatggcgagtgcaagtactcgtgaggcgagttagggcggtttaagcttctcactgatgacgtggcacaaacccaatggtgaaggaa 44242222  T
Q  243 cctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    | ||||||||||||||||||||||  |||||||||||||||| ||| || | | ||||||||||||||||| |||||||    
T  44242221 cttcaactcgccatggcgaatgaagaagctcgcgaggcgagtggatgcatatttagaattctataaatagctcactcaa 44242143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 373
Target Start/End: Complemental strand, 4600507 - 4600256
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacc 228  Q
    ||||||||| |||||||||  |  |||||||||| | || |  |||||||||||||||||||||||||||| || |||||| | |||| |||||||||||    
T  4600507 atggcgagtagaaggcgagtctgttcgccatggcgagtgcaagtactcgcgaggcgagttagggcggtttaagcttctcactgatgacatggcacaaacc 4600408  T
Q  229 caatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacca---- 324  Q
    |||||  |||||||| ||||||||||||||||||||||  |||||||||||||||| |||  ||| | | ||||||||||||||| ||||||| ||        
T  4600407 caatgatgaaggaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtggatgtagatttataattctataaatagctcactcaatcagttc 4600308  T
Q  325 ---tacttag-ttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
        | |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4600307 aatgagttagtttttatcttagtttttcatag-ttttcacttgtaatattctt 4600256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 316
Target Start/End: Original strand, 1115258 - 1115423
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||| | | |||||||| | ||||    
T  1115258 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactcctcacagatgacgtggcacaaacccactagtgaaggaacttaaact 1115357  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccca 316  Q
    |||||||||||||||| ||||||||||||||||||||  |||| |||||| || |||||||||||||    
T  1115358 cgccatggcgaatgaaggagctcgcgaggcgagttgaagcaga-tcagaatttatataaatagccca 1115423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 152 - 315
Target Start/End: Complemental strand, 32798679 - 32798516
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||  || ||||||| |||||||||||||||||||| | |||||||| || |||    
T  32798679 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctaaactcctcacagatgacgtggcacaaacccaatcgtgaaggaacttc-act 32798581  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccc 315  Q
     ||||| ||||||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||    
T  32798580 tgccatagcgaatgaaggagctcgcgaggcgagttgaagcaga-tcagaagttctataaatagccc 32798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 315
Target Start/End: Complemental strand, 31073368 - 31073133
Alignment:
Q  77 tcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttac 175  Q
    ||||||| |||||||| ||| |||||  |||||| || ||||||| |||||||| ||||||||| |||| ||||       | ||||| | |||||||||    
T  31073368 tcaaaggcgagcaattacagagagcatcagtttttcactcgcccttaactcgcaatggcgagtgaaaggtgagcaa-----caatggcgagtgaatttac 31073274  T
Q  176 tcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcg 274  Q
    |||||||||||||||||||||  ||  ||| |||  | ||||||||| |||||  ||||| |||| ||| |||||||||||||||||||| |    ||||    
T  31073273 tcgcgaggcgagttagggcggcctaaactcctcaagggtgacgtggctcaaacttaatggtgaagaaacatcaactcgccatggcgaatggagttactcg 31073174  T
Q  275 cgaggcgagttgatacagagtcagaattctataaatagccc 315  Q
     ||||||||||||| |||| | |||| ||||||||||||||    
T  31073173 tgaggcgagttgatgcagattaagaaatctataaatagccc 31073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 44917327 - 44917212
Alignment:
Q  172 ttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 271  Q
    |||| ||||||| |||||||||||| | | |  || | || ||| ||||||||| |||| ||| |||| |||||||||||||||||| |||||||    |    
T  44917327 ttacccgcgaggtgagttagggcggctaaactccttagaggtgatgtggcacaatcccactggtgaagtaacctcaactcgccatggagaatgaagttac 44917228  T
Q  272 tcgcgaggcgagttga 287  Q
    ||||||||||||||||    
T  44917227 tcgcgaggcgagttga 44917212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 42092970 - 42092920
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  42092970 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 42092920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 45016855 - 45016805
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  45016855 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 45016805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 9316889 - 9316777
Alignment:
Q  141 aaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaagg 240  Q
    |||||||||| ||| |||||||| |   || ||||||||||||||||||| |||||  ||  |  ||| ||||||||||||| ||||||| |||  |||     
T  9316889 aaggcgagctaacttgccatggcgagcaaaattactcgcgaggcgagttaaggcggcctaatccttcaaagctgacgtggcagaaacccactgggaaaga 9316790  T
Q  241 aacctcaactcgc 253  Q
    || ||||||||||    
T  9316789 aagctcaactcgc 9316777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 42151881 - 42151602
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  42151881 atcactcgcctcaaactcgccatggtgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcaagtggaaggc 42151782  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||  |||| || |||||||||||||||| ||||||||||| |   |||||| |||||||||||||||||||||| ||||||||||    
T  42151781 gagcatactcgccatggtgaatggatgtactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 42151682  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  42151681 caactcgccatggcgactgaaggagctcgcgaggcgagtggatacagaatcagaattctataaatagtccactcaaccat 42151602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 25893882 - 25894086
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| ||||||||||||||||||   |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  25893882 caactcgcaatggcgagtggaaggcgagaaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 25893981  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  25893982 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactca 25894081  T
Q  321 accat 325  Q
    |||||    
T  25894082 accat 25894086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 40957859 - 40958054
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||||||||||||||  |||||||||||| | || | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40957859 atggcgagtggaaggcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggcggtttagcctctcacagctgacgtggcacaaaccc 40957958  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  40957959 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcaaaattctataaatagcccactcaaccat 40958054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 46 - 373
Target Start/End: Complemental strand, 5877280 - 5876941
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| |||  |||||| |||||||||||| |||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  5877280 atcactcgcctccaactcgccatggctagcagcaaaggcgagcaattccagtgagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 5877182  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| ||||  | |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||||||| |||||||||    
T  5877181 cgagcgaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcacagatgacatggcacaaacccaatggtgaaggaacc 5877082  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactcaacc-----------atacttagt 332  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||           |||||||||    
T  5877081 tcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgcagaatcagaattctataaataagcccactcaaccatttcatggatatacttagt 5876982  T
Q  333 tttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  5876981 ttaatcttagtttttcatagtttttcacttgtaatattctt 5876941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 29413827 - 29414106
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  29413827 atcactcgcctccaactcgccatgacgagcttcaaaggcgagcaattcgagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 29413925  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| || |  | |||||||||||||||| ||||||||||| |   |||||| |||||||||||||||||||||| |||||||||    
T  29413926 cgagcaaactcgccatggcgaacgtgtctactcgcgaggcgagtgagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacc 29414025  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  29414026 tcaactcgccatggcgaatgaaggagctcgcgaggcgagtggatgcagaatcagaattctataaatagcccactcaaccat 29414106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 130 - 373
Target Start/End: Complemental strand, 22314807 - 22314553
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    |||||||||||||||||||   |||||||||||||||||  | |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||    
T  22314807 atggcgagtggaaggcgagagaactcgccatggcaaatgtgtgtactcgcgaggcgagttagggcggtttaactcttcacagatgacttggcacaaaccc 22314708  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc------ 323  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||          
T  22314707 aatggtgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggtgagttgatacaaaatcagaattctataaatagcccactcaaccatttca 22314608  T
Q  324 -----atacttag-ttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
         |||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  22314607 ttgatatacttagtttttatcttagtttttcatag-ttttcacttgtaacattctt 22314553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 49 - 325
Target Start/End: Complemental strand, 22361022 - 22360746
Alignment:
Q  49 actcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcga 147  Q
    ||||||||||||||||| |||||||||   ||||| |||||||| ||| |||||  |    | | ||||||  ||||||||| |||||||||||||||||    
T  22361022 actcgcctccaactcgccatggcgagcagaaaaggcgagcaatttcagtgagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaaggcga 22360924  T
Q  148 gcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctca 247  Q
    |   |||||||||||| ||||  | |||||||||||||||||||||||||||| |   |||||  |||||||||||||||||||||| ||||||||||||    
T  22360923 gagaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcacatatgacgtggcacaaacccaatggtgaaggaacctca 22360824  T
Q  248 actcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22360823 actcgccatggcgaatgaaggagctcgcgaggcgagttgatacagaatcagaattctataaatagctcactcaaccat 22360746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 2958859 - 2958655
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2958859 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2958760  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2958759 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2958660  T
Q  321 accat 325  Q
    |||||    
T  2958659 accat 2958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 2967328 - 2967124
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2967328 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2967229  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2967228 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2967129  T
Q  321 accat 325  Q
    |||||    
T  2967128 accat 2967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 29974958 - 29974754
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  29974958 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 29974859  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  29974858 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 29974759  T
Q  321 accat 325  Q
    |||||    
T  29974758 accat 29974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 29981461 - 29981257
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  29981461 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 29981362  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  29981361 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 29981262  T
Q  321 accat 325  Q
    |||||    
T  29981261 accat 29981257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 30021684 - 30021888
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  30021684 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 30021783  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  30021784 cacaaacccaatggggaagaaacttcaactcgccttggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 30021883  T
Q  321 accat 325  Q
    |||||    
T  30021884 accat 30021888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 321
Target Start/End: Complemental strand, 4974554 - 4974353
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  || ||||||| || |||  |||||||||||||||||||||||||||| || |||||| | |||||||    
T  4974554 caactcgcaatggcgagtagaaggcgagtttgttcaccatggcgaaggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgatgacgtg 4974455  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    |||||||||||||||  ||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||| | |||||| ||||||||||||| ||    
T  4974454 gcacaaacccaatggtaaaggaacttcaacttgccatggcgaatgaaggagctcgcgaggcgagtggatacagatttagaattttataaatagcccattc 4974355  T
Q  320 aa 321  Q
    ||    
T  4974354 aa 4974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 34356499 - 34356692
Alignment:
Q  132 ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaa 231  Q
    ||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  34356499 ggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaa 34356598  T
Q  232 tggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||||    
T  34356599 tggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagttaaggcagactcagaatcctataaatagcccactcaaccat 34356692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 34358290 - 34358483
Alignment:
Q  132 ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaa 231  Q
    ||||||| |||||||||  |  |||||||||| | || | | ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||    
T  34358290 ggcgagtagaaggcgagtgtgttcgccatggcgagtggaatgactcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaa 34358389  T
Q  232 tggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||| |||| ||| ||||||||||||||||||||||  ||| ||||||||||||| |  |||| ||||||| |||||||||||||||||||||||    
T  34358390 tggggaagaaacttcaactcgccatggcgaatgaagtagcccgcgaggcgagttaaggcagactcagaatcctataaatagcccactcaaccat 34358483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 318
Target Start/End: Original strand, 12505043 - 12505209
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||  ||  || |||| || ||| ||||| |||||||| ||| |||| |||||| |||    
T  12505043 actcgcaatggcgaatgcatttactcgcgaggcgagttagggcggcctaaactcctcaaaggtgatgtggctcaaacccactggtgaagtaacctc-act 12505141  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccact 318  Q
    |||||| |||||||||    ||||||||||||||||||  | | |  |||||||||||||||||||||    
T  12505142 cgccattgcgaatgaagttactcgcgaggcgagttgatgaataatgggaattctataaatagcccact 12505209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 2439743 - 2439580
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||| ||||| | |||| ||||||||||||| ||||||||||   ||  ||| ||| || ||||||||| |||||  ||||| |||| ||| ||||||    
T  2439743 actcgcaatggcgagtgaaattactcgcgaggcaagttagggcgccctaaactcctcagaggtgacgtggctcaaacttaatggtgaagaaacatcaact 2439644  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtca-gaattctataaatagcc 314  Q
    | |||||||||||| |    |||||||||||||||||| || | ||| |||||||||||||||||    
T  2439643 caccatggcgaatggagttactcgcgaggcgagttgatgca-aatcaggaattctataaatagcc 2439580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 30579487 - 30579594
Alignment:
Q  154 tcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcg 252  Q
    |||||||||| ||| ||| |||||||||||||||||| |||||   |  ||| ||| ||||||||||||| ||||||| ||| |||| ||| ||||||||    
T  30579487 tcgccatggcgaat-aatatactcgcgaggcgagttaaggcggccaaaactcctcagagctgacgtggcagaaacccactggtgaagaaacatcaactcg 30579585  T
Q  253 ccatggcga 261  Q
    |||||||||    
T  30579586 ccatggcga 30579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 337 - 370
Target Start/End: Complemental strand, 4974322 - 4974289
Alignment:
Q  337 tcttagtttttcatagtttttcacttgtaatatt 370  Q
    ||||||||||||||||||||||||||||||||||    
T  4974322 tcttagtttttcatagtttttcacttgtaatatt 4974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 266
Target Start/End: Complemental strand, 2823214 - 2823099
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||| ||||| | || |||||||| | |||||||||||||||| | |  ||| ||| || ||||||| |||| | ||| ||| |||| || |||||||    
T  2823214 actcgcaatggcgagtggatttactcacaaggcgagttagggcggctaaaactcctcagaggtgacgtgtcacagatccactggtgaagaaatctcaact 2823115  T
Q  251 cgccatggcgaatgaa 266  Q
    ||||||||||||||||    
T  2823114 cgccatggcgaatgaa 2823099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 25893744 - 25893794
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    ||||||||||||||||| || ||||| ||| ||||||| ||||||||||||    
T  25893744 atcactcgcctccaacttgccatggcaagcatcaaaggcgagcaattccag 25893794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 16816497 - 16816775
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16816497 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagtgagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 16816595  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  16816596 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 16816695  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||| |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  16816696 caactcgccatggcgaatgaaggagctcacgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 16816775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 16855654 - 16855932
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16855654 atcactcgcctccaactcgcca-ggcgagcttcaaaggcgagcaattccagtgagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 16855752  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| || |   |||||| |||||||||||||||||||||| ||||||||||    
T  16855753 gagcatactcgccatggcgaatggatgtacttgcgaggcgagttagggcggtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 16855852  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||| |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  16855853 caactcgccatggcgaatgaaggagctcacgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 16855932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 46 - 373
Target Start/End: Original strand, 21067086 - 21067415
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| |||||  || ||| ||||| |||||||||||||||||| ||| |||||    
T  21067086 atcactcgcctccaacttgccatggcgagcttcaaaggcgagcaattccagagagcatcagattttcattctccctcaactcgcatggcgggtgaaaggc 21067185  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctct-cacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    ||||  |||||||||||| |||| || | |||||||||||||||| |||||| ||  |||| |||||||||||||||||||||||||||| |||||||||    
T  21067186 gagcacactcgccatggcgaatggatgtgctcgcgaggcgagttatggcggtctaaactcttcacagctgacgtggcacaaacccaatggtgaaggaacc 21067285  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacca-tacttagttttatc-ttag 342  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||     ||| ||||    
T  21067286 gcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatacagagtcagaattttataaatagcccactcaaccatttcata-aaaaatctttag 21067384  T
Q  343 tttttcatagtttttcacttgtaatattctt 373  Q
    |||||||||||||||||||||||||||||||    
T  21067385 tttttcatagtttttcacttgtaatattctt 21067415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 122 - 373
Target Start/End: Original strand, 36781417 - 36781679
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36781417 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttaccctctcacagctgacgtgg 36781516  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  36781517 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 36781616  T
Q  321 acc-----------atacttagttttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    |||           |||||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  36781617 accatttcattgagatacttagttttctctgagtttttcata-cttttcacttgtaatattctt 36781679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 15853537 - 15853333
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15853537 caactcgcaatggcgagtggaaggcgagcccactcgccatggtgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 15853438  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  15853437 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 15853338  T
Q  321 accat 325  Q
    |||||    
T  15853337 accat 15853333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 42930615 - 42930818
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42930615 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtt-agcctctcacagctgacgtgg 42930713  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  42930714 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 42930813  T
Q  321 accat 325  Q
    |||||    
T  42930814 accat 42930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 43268847 - 43268643
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||| |||||||||||||    
T  43268847 caactcgcaatggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtgg 43268748  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  43268747 cacaaacccaatggcgaaggaacctcaactcgccatggcgattgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactca 43268648  T
Q  321 accat 325  Q
    |||||    
T  43268647 accat 43268643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 46 - 373
Target Start/End: Original strand, 2020606 - 2020945
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  2020606 atcactcgcctctaactcgccatggcgagcttcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 2020704  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| |||   | |||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||||| |||||||||    
T  2020705 cgagcgaactcgccatggcgaatatgtatactcgcgaggcgagttagggcggtttaactcttcacagatgacgtggcacaaacccaatggtgaaggaacc 2020804  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc-----------atacttagtt 333  Q
    ||||||||||||| |||||||| ||||||||||||| |||| || |||| |||||||||||||||||||||||||||||           ||||||||||    
T  2020805 tcaactcgccatgacgaatgaaagagctcgcgaggcaagttaatgcagaatcagaattctataaatagcccactcaaccatttcattgatatacttagtt 2020904  T
Q  334 tt-atcttagtttttcatagtttttcacttgtaatattctt 373  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  2020905 ttaatcttagtttttcatagtttttcacttgtaatattctt 2020945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 122 - 370
Target Start/End: Original strand, 21341174 - 21341422
Alignment:
Q  122 caactcgcatggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtgg 220  Q
    ||||||||||||||||| ||||||||||  |||||||||||| ||||| | |||||||||||||||||||||||  |||| ||| |||||||||||||||    
T  21341174 caactcgcatggcgagttgaaggcgagccaactcgccatggcgaatgattgtactcgcgaggcgagttagggcgacttagactcctcacagctgacgtgg 21341273  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  21341274 cacaaaaccaatggtgaaggaacctcaactcgccatggcgaatgaagaagctcgcgaggcgaattgatgcagaatcagaattctataaatagcccactca 21341373  T
Q  321 accatacttagtt--ttatcttagtttttcatagtttttcacttgtaatatt 370  Q
    |||||  ||  ||    ||||||||||||||||| |||||||||||||||||    
T  21341374 accat--ttcattaagaatcttagtttttcatag-ttttcacttgtaatatt 21341422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 181 - 325
Target Start/End: Complemental strand, 29485822 - 29485678
Alignment:
Q  181 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 280  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29485822 aggcgagttagggcagtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 29485723  T
Q  281 gagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  29485722 gagttgatgcagagtcagaattgtataaatagcccactcaaccat 29485678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 2158610 - 2158406
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2158610 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2158511  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2158510 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2158411  T
Q  321 accat 325  Q
    |||||    
T  2158410 accat 2158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 2165026 - 2164822
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2165026 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2164927  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2164926 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2164827  T
Q  321 accat 325  Q
    |||||    
T  2164826 accat 2164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 12951797 - 12951593
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  12951797 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 12951698  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||| ||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  12951697 cacaaacccaatggggaagaaacttcaactcgccatgacgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 12951598  T
Q  321 accat 325  Q
    |||||    
T  12951597 accat 12951593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 34840479 - 34840683
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  34840479 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 34840578  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  34840579 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 34840678  T
Q  321 accat 325  Q
    |||||    
T  34840679 accat 34840683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 45012982 - 45012778
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   |||||||||| |||| ||||||||||||||||| |  ||||||||||    
T  45012982 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggggagtaagggcggtttagcctctaaatgctgacgtgg 45012883  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  45012882 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 45012783  T
Q  321 accat 325  Q
    |||||    
T  45012782 accat 45012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 34834044 - 34834239
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||| ||||||||||||||||||| |||| |||| |   ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||    
T  34834044 atggcgagtagaaggcgagcttactcgccgtggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtggcacaaaccc 34834143  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| |||||||||||||||||||||||||||||||    
T  34834144 aatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactcaaccat 34834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 13901196 - 13901395
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| || ||||| |||||||||||||||||||||||| | || | | ||||||||||||||| | |||||||||||| ||||||||||||||||    
T  13901196 caactcgcaatgacgagtagaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcccctcacagctgacgtgg 13901295  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| |||||||||||||| |||||||  |||||     |||||||||| |||||||||||||||||||||||||||||||    
T  13901296 cacaaacccaatggggaagtaacttcaactcgccatggtgaatgaagtagctc-----gcgagttgatgcagagtcagaattctataaatagcccactca 13901390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 11909264 - 11909356
Alignment:
Q  173 tactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatg 264  Q
    |||||||||||||||||||||||| | |  || |||| ||||||||||||| ||||||| ||  |||| |||  |||||| ||||||||||||    
T  11909264 tactcgcgaggcgagttagggcggctaaaactcctcagagctgacgtggcagaaacccactgatgaagtaacagcaactcaccatggcgaatg 11909356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2158685 - 2158635
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  2158685 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 2158635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2165101 - 2165051
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  2165101 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 2165051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 12951872 - 12951822
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  12951872 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 12951822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 13901121 - 13901171
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  13901121 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 13901171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 29485914 - 29485868
Alignment:
Q  50 ctcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  29485914 ctcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 29485868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 34833960 - 34834010
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  34833960 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 34834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 34840404 - 34840454
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  34840404 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 34840454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 43268922 - 43268872
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||  ||||||| ||||||||||||    
T  43268922 atcactcgcctccaactcgccatggcaagtatcaaaggcgagcaattccag 43268872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 45013057 - 45013007
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  45013057 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 45013007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 11909160 - 11909200
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaa 170  Q
    ||||||||||||||||||||  |||||||||||||| ||||    
T  11909160 atggcgagtggaaggcgagcaaactcgccatggcaagtgaa 11909200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 34744644 - 34744692
Alignment:
Q  213 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 261  Q
    |||||||||| ||||||||||| |||| || |||| |||||||||||||    
T  34744644 tgacgtggcagaaacccaatggtgaagcaagctcacctcgccatggcga 34744692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 181; Significance: 1e-97; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 46 - 318
Target Start/End: Complemental strand, 71500 - 71228
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  71500 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcatttgccctcaactcgcatggcgagtggaaggc 71401  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||| ||| | || |   |||||| |||||||||||||||||||||| ||||||||||    
T  71400 gagcatactcaccatggcaaatggatgtactcgcgaggcgagttagcgcgatctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacct 71301  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccact 318  Q
    ||||||||||||||||||||| |||||||||||||||||  || |||| ||||||||||||||||||||||||    
T  71300 caactcgccatggcgaatgaaggagctcgcgaggcgagtgcatgcagaatcagaattctataaatagcccact 71228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 50689 - 50485
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  50689 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 50590  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  50589 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 50490  T
Q  321 accat 325  Q
    |||||    
T  50489 accat 50485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 50764 - 50714
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  50764 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 50714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 4e-97; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 46 - 373
Target Start/End: Complemental strand, 21643579 - 21643243
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||   ||| | |   |||||  ||||  ||||||||| |||| ||||||||    
T  21643579 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagaatgcaacaaagattaca--cgccaccaactcgcaatggctagtggaag 21643482  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | || |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21643481 gcgagcttactcgccatggcgagtgcattt-ctcgcgaggcgagctagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 21643383  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaacc-----------atacttagt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||    
T  21643382 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccatttcattgatatacttagt 21643283  T
Q  333 tttatcttagtttttcatagtttttcacttgtaatattctt 373  Q
    ||| ||| |||||||||||  ||||||||||||||||||||    
T  21643282 tttctctgagtttttcata-cttttcacttgtaatattctt 21643243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 60 - 325
Target Start/End: Complemental strand, 19090843 - 19090578
Alignment:
Q  60 actcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggcgagcttactcgcca 159  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19090843 actcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggcgagcatactcgcca 19090744  T
Q  160 tggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggc 259  Q
    |||| | || || |||| ||||||||||||||||| || || |   |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19090743 tggcgagtggatgtacttgcgaggcgagttagggcagtctaactcttcacagatgacgtggcacaaacccaatggtgaaggaacctcaactcgccatggc 19090644  T
Q  260 gaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  19090643 gaatgaaggagctcgcgaggcgagttcatgcagaatcagaattctataaatagcccactcaaccat 19090578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 36876617 - 36876338
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||    ||| | |  ||||||  ||||  ||||||||| |||||||||| ||    
T  36876617 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccataatgcaacaaaatttaca--cgccaccaactcgcaatggcgagtggcag 36876520  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | || | | || ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36876519 gcgagcttactcgccatggcgagtggaatgacccgcgaggcgagctagggcggtttagccgctcacagctgacgtggcacaaacccaatggcgaaggaac 36876420  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36876419 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 14288707 - 14288503
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| ||||||||||||||||||   |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  14288707 caactcgcaatggcgagtggaaggcgagaaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 14288608  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  14288607 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactca 14288508  T
Q  321 accat 325  Q
    |||||    
T  14288507 accat 14288503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 14299967 - 14299688
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgc-atggcgagtggaagg 144  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||  ||||  |    | | ||| ||  |||||||| |||||||||||||||    
T  14299967 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ccttcaccaccaactcgcaatggcgagtggaagg 14299869  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    ||||   |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14299868 cgagaaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 14299769  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  14299768 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 14299688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 9642150 - 9642354
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  ||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9642150 caactcgcaatggcgagtggaaggcgagcccactcgtcatggcgaatgattttactcacgaggcgagttagggcggtttagcctctcacagctgacgtgg 9642249  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  9642250 cacaaacccaatggcgaaggaacctcaactcgccctggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 9642349  T
Q  321 accat 325  Q
    |||||    
T  9642350 accat 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 51 - 325
Target Start/End: Original strand, 8192117 - 8192390
Alignment:
Q  51 tcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 149  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  8192117 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 8192215  T
Q  150 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 249  Q
      |||||||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8192216 acactcgccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 8192314  T
Q  250 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8192315 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 8192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 23613366 - 23613171
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||||||||||||||  |||||||||||| | || | | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  23613366 atggcgagtggaaggcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggaggtttagcctctcacagctgacgtggcacaaaccc 23613267  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23613266 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcggaattctataaatagcccactcaaccat 23613171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 51 - 325
Target Start/End: Original strand, 8184557 - 8184830
Alignment:
Q  51 tcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 149  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  8184557 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 8184655  T
Q  150 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 249  Q
      ||| |||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8184656 acactagccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 8184754  T
Q  250 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8184755 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 8184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 6020140 - 6020291
Alignment:
Q  174 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 273  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6020140 actcgcgaggcgagttagggcggtttagcctctcacatctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 6020239  T
Q  274 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  6020240 gcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 6020291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 122 - 373
Target Start/End: Complemental strand, 15950135 - 15949881
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| ||||||||| ||||| |||  |||||||||||| ||||  | |||||||||||||||||||||||||||| |   ||| || ||| ||||    
T  15950135 caactcgcaatggcgagtgaaaggcaagcgaactcgccatggcgaatgtgtctactcgcgaggcgagttagggcggtttaactcttcatagatgatgtgg 15950036  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  15950035 cacaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagttgatgtagagtcagaattctataaatagcccactca 15949936  T
Q  321 accatacttagtttt---atcttagtttttcatagtttttcacttgtaatattctt 373  Q
    ||||| || ||||||    | |||||||||||||||||||||||||||||||||||    
T  15949935 accat-ctcagtttttgggtattagtttttcatagtttttcacttgtaatattctt 15949881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 46 - 322
Target Start/End: Original strand, 3923255 - 3923531
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  3923255 atcactcgcctccaactcgccatggcaagcaacaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaagg 3923353  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    ||| |  |||||||||||| ||||  | |||||||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3923354 cgaacaaactcgccatggcgaatgtgtctactcgcgaggcgagtaagagcagtttagcctctcaccgctgacgtggcacaaacccaatggcgaaggaacc 3923453  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaac 322  Q
    | |||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  3923454 ttaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaac 3923531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 173 - 373
Target Start/End: Complemental strand, 15915562 - 15915360
Alignment:
Q  173 tactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagct 272  Q
    |||||||||||||||||||||||||||| |   |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  15915562 tactcgcgaggcgagttagggcggtttaactcttcacagatgacatggcacaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagct 15915463  T
Q  273 cgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccatacttagtttt---atcttagtttttcatagtttttcacttgtaatat 369  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||    | ||||||||||||||||||||| |||||||||    
T  15915462 tgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaatcat-ctcagtttttgggtattagtttttcatagtttttcaattgtaatat 15915364  T
Q  370 tctt 373  Q
    ||||    
T  15915363 tctt 15915360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 1379946 - 1379742
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  1379946 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 1379847  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  1379846 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 1379747  T
Q  321 accat 325  Q
    |||||    
T  1379746 accat 1379742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 5049135 - 5049339
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  5049135 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 5049234  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  5049235 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 5049334  T
Q  321 accat 325  Q
    |||||    
T  5049335 accat 5049339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 6796437 - 6796233
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  6796437 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 6796338  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  6796337 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 6796238  T
Q  321 accat 325  Q
    |||||    
T  6796237 accat 6796233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 2447647 - 2447443
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||| ||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  2447647 caactcgcaatggctagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 2447548  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  2447547 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 2447448  T
Q  321 accat 325  Q
    |||||    
T  2447447 accat 2447443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 8141683 - 8141887
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  8141683 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 8141782  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||| ||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  8141783 cacaaacccaatggggaagaaacttcaactcgccatggcgattgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 8141882  T
Q  321 accat 325  Q
    |||||    
T  8141883 accat 8141887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 26602964 - 26602768
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||||||||||||||  |||||||||||| ||||  | || |||||||| |||||||||||||||| |   |||||| |||||||||||||||||    
T  26602964 atggcgagtggaaggcgagcgaactcgccatggcgaatgtgtctattcgcgaggggagttagggcggtttaactcttcacagatgacgtggcacaaaccc 26602865  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactcaaccat 325  Q
    ||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  26602864 aatggtgaaggaacctcaactcaccatggcgaattaaggagctcgcgaggcgagttgatgcagaatcagaattctataaataagcccactcaaccat 26602768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 48346322 - 48346521
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| || ||     |||||||||||||| ||||||||||||||||| |  ||||||||||    
T  48346322 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaagga-----ctcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 48346416  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  48346417 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 48346516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 48352706 - 48352905
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| || ||     |||||||||||||| ||||||||||||||||| |  ||||||||||    
T  48352706 caactcgcaatggcgagtagaaggcgagcttactcgccgtggcgaagga-----ctcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 48352800  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  48352801 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 48352900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 152 - 313
Target Start/End: Complemental strand, 37026673 - 37026511
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| |  |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||  || ||    
T  37026673 actcgccatggcgagggaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaactgca-ct 37026575  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagc 313  Q
    |||| ||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||    
T  37026574 cgccctggcgaatgaaggagctcgcgaggcgagttgatacagaattagaatttctataaatagc 37026511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 373
Target Start/End: Original strand, 22853497 - 22853703
Alignment:
Q  168 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 266  Q
    |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  22853497 gaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaacttca-ctcgccctggcgaatgaa 22853595  T
Q  267 tgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat---acttagttttatcttagtttttcatagtttttcacttg 363  Q
     ||||||||||||||||||||| |||| | | |||| |||||||||| || |||| |||   | ||||      || |||||||||||||||||||||||    
T  22853596 ggagctcgcgaggcgagttgatgcagaattaaaattttataaatagctcattcaatcatttcatttag--gacactgagtttttcatagtttttcacttg 22853693  T
Q  364 taatattctt 373  Q
    ||||||||||    
T  22853694 taatattctt 22853703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 152 - 313
Target Start/End: Complemental strand, 39433854 - 39433693
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| |  |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||| ||||| |||||||| | | ||    
T  39433854 actcgccatggctagggaatgtactcgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacctaatggtgaaggaacttta-ct 39433756  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagc 313  Q
    |||| ||||||||||| |||||||||||||||||||||||||| | |||| |||||| |||||    
T  39433755 cgccttggcgaatgaaggagctcgcgaggcgagttgatacagaattagaagtctatatatagc 39433693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 222 - 356
Target Start/End: Original strand, 1947980 - 1948115
Alignment:
Q  222 acaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| ||||||| |||||||||| ||||||||    
T  1947980 acaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagctcacgaggtgagttcatgcagaatcagaatactataaatagaccactcaa 1948079  T
Q  322 ccatacttagtttt--atcttagtttttcatagtttt 356  Q
    ||||  | ||||||  |||||||||||||||| ||||    
T  1948080 ccat-ttcagtttttaatcttagtttttcatactttt 1948115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 152 - 315
Target Start/End: Original strand, 33849905 - 33850069
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| |||||  |||||||||||||||||| ||| |||||||| | ||||    
T  33849905 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactcctcacaaatgacgtggcacaaacccactggtgaaggaacttaaact 33850004  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaa-ttctataaatagccc 315  Q
    |||||||| ||||||| |||||||||||||||| |||  |||| |||||| || ||||||||||||    
T  33850005 cgccatggagaatgaaggagctcgcgaggcgaggtgaatcaga-tcagaatttatataaatagccc 33850069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8184489 - 8184539
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  8184489 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8184539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8192049 - 8192099
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  8192049 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 37027217 - 37027168
Alignment:
Q  47 tcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||    
T  37027217 tcactcgcctccaactcgccatggcgagcagcaaaggtgaggaattccag 37027168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 15953539 - 15953492
Alignment:
Q  49 actcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||||    
T  15953539 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattccag 15953492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 1380021 - 1379971
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  1380021 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 1379971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 1386125 - 1386075
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  1386125 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 1386075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 2447722 - 2447672
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  2447722 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 2447672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 5049060 - 5049110
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  5049060 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 5049110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 6020030 - 6020080
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  6020030 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccag 6020080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 6796512 - 6796462
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  6796512 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 6796462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8141608 - 8141658
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  8141608 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 8141658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 22853274 - 22853321
Alignment:
Q  47 tcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    ||||||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  22853274 tcactcgcctccaactcgccatggccag--tcaaaggtgagcaattccag 22853321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 39434099 - 39434057
Alignment:
Q  47 tcactcgcctccaactcgctatggcgagcttcaaaggtgagca 89  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  39434099 tcactcgcctccaactcgccatggcgagcagcaaaggtgagca 39434057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 48346247 - 48346297
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  48346247 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 48346297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 48352631 - 48352681
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  48352631 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 48352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 15925213 - 15925160
Alignment:
Q  49 actcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca 102  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||| || |||||    
T  15925213 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattctagtgagca 15925160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 26603045 - 26603001
Alignment:
Q  49 actcgcctccaactcgctatggcgagcttcaaaggtgagcaattc 93  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||    
T  26603045 actcgcctccaactcgccatggcgagcagcaaaggcgagcaattc 26603001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 368
Target Start/End: Original strand, 33850096 - 33850132
Alignment:
Q  332 ttttatcttagtttttcatagtttttcacttgtaata 368  Q
    |||||||| |||||||||||||||||||| |||||||    
T  33850096 ttttatctcagtttttcatagtttttcacgtgtaata 33850132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 45434413 - 45434369
Alignment:
Q  271 ctcgcgaggcgagttgatacagagtcagaattctataaatagccc 315  Q
    ||||||||||||||| || |||| | |||||||||||||||||||    
T  45434413 ctcgcgaggcgagtttatgcagattaagaattctataaatagccc 45434369  T

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Target: scaffold0513 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 11304 - 11583
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgcatggcgagtggaaggc 145  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11304 atcactcgcctccaactcgccatggcgagcttcaaaggcgagcaattccagggagcaccagtttttcattcgccctcaactcgcatggcgagtggaaggc 11403  T
Q  146 gagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacct 245  Q
    |||| || |||||||||| |||| || ||||||| |||| ||||||||||||||| |   |||||  |||||||||| ||||||| ||| |||||||||     
T  11404 gagcatagtcgccatggcgaatggatgtactcgcaaggcaagttagggcggtttaactcttcacatatgacgtggcataaacccactggtgaaggaacca 11503  T
Q  246 caactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  11504 caactcgccatggcgaatgaaggagtttgtgaggcgagttgatgcagaatcagaattctataaatagcccactcaaccat 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 55462007 - 55462211
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55462007 caactcgcaatggcgagtggaaggcgagcccactcgccatggcaaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 55462106  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  55462107 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 55462206  T
Q  321 accat 325  Q
    |||||    
T  55462207 accat 55462211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 13595095 - 13594891
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13595095 caactcgcaatggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 13594996  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  13594995 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactca 13594896  T
Q  321 accat 325  Q
    |||||    
T  13594895 accat 13594891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 37367470 - 37367749
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||    
T  37367470 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaagg 37367568  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37367569 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 37367668  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37367669 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 37367749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 8104859 - 8104664
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    ||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8104859 atggcgagtggaaggcgagcccactcgccatggcgaatgattttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 8104760  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  8104759 aatggcgaaggaacctcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactcaaccat 8104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 51 - 325
Target Start/End: Complemental strand, 27591368 - 27591094
Alignment:
Q  51 tcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 149  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  27591368 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggcgagtggaaggcgaga 27591270  T
Q  150 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 249  Q
      |||||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591269 aaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 27591170  T
Q  250 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  27591169 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 27591094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 30239288 - 30239009
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||| |||   ||||| ||||||||||||  |||| | |   |||||  ||||  ||||||||| |||||||||||||    
T  30239288 atcactcgcctccaactcgccatggcaagcagaaaaggcgagcaattccagaaagcaacaaagattaca--cgccaccaactcgcaatggcgagtggaag 30239191  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    ||||||  |||||||||||| | || | | |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30239190 gcgagcaaactcgccatggcgagtggaatgactcgcgaggcgagctagggcagtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 30239091  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30239090 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcggaattctataaatagcccactcaaccat 30239009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 51 - 325
Target Start/End: Complemental strand, 17457912 - 17457639
Alignment:
Q  51 tcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 149  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  17457912 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 17457814  T
Q  150 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 249  Q
      |||||||||||| | || | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17457813 acactcgccatggcgagtggaatgactcgcgaggcgagt-agggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 17457715  T
Q  250 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17457714 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 17457639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 7781312 - 7781107
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||  | |||||| || |||||||||||||||||| |   |||||| ||||||||    
T  7781312 caactcgcaatggcgagtggaaggcgagcgaactcgccatggcgaatgtgtctactcgtgaagcgagttagggcggtttaactcttcacagatgacgtgg 7781213  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaat-agcccactc 319  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||| ||||||||     
T  7781212 cacaaacccaatggtgaaggaacctcaactcgccatggcgaatgaaggagctcgtgaggcgagttgatgcagaatcagaattctataaataagcccactt 7781113  T
Q  320 aaccat 325  Q
    ||||||    
T  7781112 aaccat 7781107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 41373985 - 41373781
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  41373985 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 41373886  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||| ||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  41373885 cacaaacccaatggggaagaaacttcaactcgccacggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 41373786  T
Q  321 accat 325  Q
    |||||    
T  41373785 accat 41373781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 37355569 - 37355774
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||| ||    
T  37355569 caactcgcaatggcgagtagaaggcgagtttgttcgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacatg 37355668  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    || |||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  || |||| |||||||||||||||||||||||||    
T  37355669 gcgcaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgcagactcagaattctataaatagcccactc 37355768  T
Q  320 aaccat 325  Q
    ||||||    
T  37355769 aaccat 37355774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 16406281 - 16406132
Alignment:
Q  173 tactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagc 271  Q
    ||||| |||||||||||||||||||||| || |||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||    
T  16406281 tactcacgaggcgagttagggcggtttaagcttctcactgatgacgtggcacaaacccaatggtgaaggaacttcaactcgccatggcgaatgaagaagc 16406182  T
Q  272 tcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    ||||||||||||| ||| || | | ||||||||||||||||| |||||||    
T  16406181 tcgcgaggcgagtggatgcaaatttagaattctataaatagctcactcaa 16406132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 116 - 293
Target Start/End: Original strand, 5659761 - 5659939
Alignment:
Q  116 cgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagct 213  Q
    |||||||||||||||  ||||| ||||||||||||  |||||| |||||||||| |||||||||||||||||||||||| ||   |  || |||| |  |    
T  5659761 cgccctcaactcgcaaaggcgaatggaaggcgagca-actcgcaatggcaaatgcatttactcgcgaggcgagttagggtggccaaaactcctcaaaagt 5659859  T
Q  214 gacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacaga 293  Q
    ||||||||||||||| | ||| |||||||||| ||||||||| ||| ||||||    |||||||||||||||||| ||||    
T  5659860 gacgtggcacaaacctactggtgaaggaaccttaactcgccaaggcaaatgaagttactcgcgaggcgagttgatgcaga 5659939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 30210841 - 30210947
Alignment:
Q  182 ggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 280  Q
    |||||||||||||||  ||| ||| |||||| |||||||||||||||| | ||| |||||||| | |||||||||||||||||||| || ||||||||||    
T  30210841 ggcgagttagggcggcctagactcctcacagatgacgtggcacaaacctactggtgaaggaacttaaactcgccatggcgaatgaaggaactcgcgaggc 30210940  T
Q  281 gagttga 287  Q
    |||||||    
T  30210941 gagttga 30210947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 36754132 - 36754233
Alignment:
Q  213 tgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatag 312  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||    ||| |||||||||||||  ||||    |||||||||||||||    
T  36754132 tgacgtggcacaaacccactggtgaagtaacctcaactcgccatggcgaatgaagttactcacgaggcgagttgaggcagaacaggaattctataaatag 36754231  T
Q  313 cc 314  Q
    ||    
T  36754232 cc 36754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 27591436 - 27591386
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  27591436 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 27591386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 17457980 - 17457930
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| | ||||| ||||||||||||    
T  17457980 atcactcgcctccaactcgccatggcaagcattaaaggcgagcaattccag 17457930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 40975903 - 40976021
Alignment:
Q  143 ggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaa 242  Q
    |||||||| ||| |||||||| | | || ||||||||||||||||||| |||||  ||  | || | ||||||||||||| ||| ||| |||  ||| ||    
T  40975903 ggcgagctaacttgccatggcgagtaaaattactcgcgaggcgagttaaggcggcctaatcccttaaagctgacgtggcagaaatccactgggaaagaaa 40976002  T
Q  243 cctcaactcgccatggcga 261  Q
     |||||||| |||||||||    
T  40976003 gctcaactcaccatggcga 40976021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 41374060 - 41374010
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  41374060 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 41374010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 4e-88; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 4737539 - 4737818
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  4737539 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 4737637  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4737638 cgagcaaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 4737737  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  4737738 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattatataaatagcccactcaaccat 4737818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 130 - 322
Target Start/End: Original strand, 34710801 - 34710993
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaaccc 229  Q
    |||||||||||||||||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  34710801 atggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaaccc 34710900  T
Q  230 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaac 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34710901 aatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaac 34710993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 32327641 - 32327920
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  32327641 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 32327738  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | |  | | ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32327739 gcgagcttactcgccatggcgagtagaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtggcacaaacccaatggcgaaggaac 32327838  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32327839 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 32327920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 4187684 - 4187480
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  4187684 caactcgcaatggcgagtggaaggcgagcttactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 4187585  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||   ||||| ||||||||||||||||||||||||||    
T  4187584 cacaaacccaatggcgaaggaacttcaactcgccatggtgaatgaaggagctcgcgaggcgagttaggacagaatcagaattctataaatagcccactca 4187485  T
Q  321 accat 325  Q
    |||||    
T  4187484 accat 4187480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 31548841 - 31548690
Alignment:
Q  174 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31548841 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagccc 31548742  T
Q  274 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  31548741 gcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 31548690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 46 - 321
Target Start/End: Original strand, 7061663 - 7061938
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  7061663 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 7061760  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | || |   ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  7061761 gcgagcttactcgccatggcgagtggaaggactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaacccaatggggaagaaac 7061860  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
     ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7061861 ttcaactcgccatggcgaatgaagtagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaa 7061938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 46 - 321
Target Start/End: Original strand, 7068849 - 7069124
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  7068849 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 7068946  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | || |   ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  7068947 gcgagcttactcgccatggcgagtggaaggactcgcgaggcgagtgaaggcggtttagcctctcacagctgacgtggcacaaacccaatggggaagaaac 7069046  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
     ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7069047 ttcaactcgccatggcgaatgaagtagctcgcgaggcgagttgatgcagagtcagaattctataaatagcccactcaa 7069124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 46 - 296
Target Start/End: Original strand, 4668556 - 4668806
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  4668556 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 4668654  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| | || | | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4668655 cgagcaaactcgccatggcgagtggaatgactcgcaaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 4668754  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtc 296  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4668755 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtc 4668806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 9863995 - 9864200
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||| |  |||  |||||||||||||||||||||||||||| || |||||| |||||||||    
T  9863995 caactcgcaatggcgagtagaaggcgagtttgttcgccatggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcactgctgacgtg 9864094  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  9864095 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaaggagctcgcgaggcgagtagatgcagaatcagaattctataaatagcccactc 9864194  T
Q  320 aaccat 325  Q
    ||||||    
T  9864195 aaccat 9864200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 1427646 - 1427850
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  1427646 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 1427745  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  1427746 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 1427845  T
Q  321 accat 325  Q
    |||||    
T  1427846 accat 1427850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 4019458 - 4019662
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  4019458 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 4019557  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  4019558 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 4019657  T
Q  321 accat 325  Q
    |||||    
T  4019658 accat 4019662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 4025884 - 4026088
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  4025884 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 4025983  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  4025984 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 4026083  T
Q  321 accat 325  Q
    |||||    
T  4026084 accat 4026088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 4717763 - 4717967
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  4717763 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 4717862  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  4717863 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 4717962  T
Q  321 accat 325  Q
    |||||    
T  4717963 accat 4717967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 34649799 - 34649595
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  34649799 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 34649700  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  34649699 cacaaacccaatggggaagaaacttcaactcaccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 34649600  T
Q  321 accat 325  Q
    |||||    
T  34649599 accat 34649595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 34656250 - 34656046
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  34656250 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 34656151  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  34656150 cacaaacccaatgggaaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 34656051  T
Q  321 accat 325  Q
    |||||    
T  34656050 accat 34656046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 31128575 - 31128726
Alignment:
Q  174 actcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctc 273  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||||||||||||||||| |||| ||| |||||||||||||||||| |||  |||||    
T  31128575 actcgcgaggcgagtaaaggcggtttagcctctcaatgctgacgtggcacaaacccaatggggaagaaacttcaactcgccatggcgaaggaagtagctc 31128674  T
Q  274 gcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31128675 gcgaggcgagttgatgcagagtcagaattctataaatagcccactcaaccat 31128726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 122 - 321
Target Start/End: Original strand, 13671048 - 13671249
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||| ||| ||  |||||||||| | || |  |||||||||||||||||||||||||||| || |||||  | |||||||    
T  13671048 caactcgcaatggcgagtagaaggtgagtttgttcgccatggcgagtgcaagtactcgcgaggcgagttagggcggtttaagcttctcagtgatgacgtg 13671147  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| ||||||| ||||||||| ||| |||| | ||||||||||||||||| |||||    
T  13671148 gcacaaacccaatggtgaaggaacttcaactcgccatgacgaatgaaggagctcgggaggcgagtggatgcagatttagaattctataaatagctcactc 13671247  T
Q  320 aa 321  Q
    ||    
T  13671248 aa 13671249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 21261815 - 21262007
Alignment:
Q  130 atggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacc 228  Q
    ||||||||| |||||||||  |  |||||||||| | || |  ||||||||||||||||||||||||||||  || ||||| | |||||||||| |||||    
T  21261815 atggcgagtagaaggcgagtatgttcgccatggcgagtggaagtactcgcgaggcgagttagggcggtttaaacttctcactgatgacgtggcataaacc 21261914  T
Q  229 caatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaa 321  Q
    |||||| |||||||| |||  ||||||||||||||||| |||||||||||||| || |||||||| | |||| ||||||||||||||| ||||    
T  21261915 caatggtgaaggaacttcatttcgccatggcgaatgaaggagctcgcgaggcgggtggatacagatttagaaatctataaatagcccattcaa 21262007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 27670982 - 27670837
Alignment:
Q  168 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 266  Q
    |||| |||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  27670982 gaatgtactcgcgaggcgagttagggcggcttaggcttctcacggctgacgtggcacaaacccaatggtgaaggaacttca-ctcgccctggcgaatgaa 27670884  T
Q  267 tgagctcgcgaggcgagttgatacagagtcagaattctataaatagc 313  Q
     ||||||||||| ||| ||||| |||| | |||||||||||||||||    
T  27670883 ggagctcgcgagacgatttgatgcagaattagaattctataaatagc 27670837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 288
Target Start/End: Original strand, 1166694 - 1166891
Alignment:
Q  91 ttccagggagcactagttttacattcgccctcaactcgcat-ggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagtt 189  Q
    |||||| |||||| |||||| ||  |||||||||||||||  ||||| ||||||||||||  |||||| ||||  | || ||||||||||||||||||||    
T  1166694 ttccagagagcaccagtttt-cacacgccctcaactcgcaaaggcgaatggaaggcgagca-actcgcaatggtgagtgcatttactcgcgaggcgagtt 1166791  T
Q  190 agggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgat 288  Q
    ||||||| | |  ||| ||| || ||||||| |||||||||| ||| |||| ||||||||||||||| || |||||||    ||||||||||||||||||    
T  1166792 agggcggctaaaactcctcagaggtgacgtgtcacaaacccactggtgaagaaacctcaactcgccaaggtgaatgaagctactcgcgaggcgagttgat 1166891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4668493 - 4668543
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  4668493 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 4668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4737476 - 4737526
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  4737476 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 4737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 1427571 - 1427621
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  1427571 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 1427621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4019383 - 4019433
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  4019383 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 4019433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4025809 - 4025859
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  4025809 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 4025859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4717688 - 4717738
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  4717688 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 4717738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 21261731 - 21261781
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||| ||||||||||||| |||||||||  |||||| ||||||||||||    
T  21261731 atcacttgcctccaactcgccatggcgagcagcaaaggcgagcaattccag 21261781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 31548940 - 31548890
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||||||    
T  31548940 atcactcgcctccaactcgccatagcaagcatcaaaggcgagcaattccag 31548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 34649874 - 34649824
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  34649874 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 34649824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 34656325 - 34656275
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  34656325 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 34656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 27671172 - 27671123
Alignment:
Q  47 tcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    ||||||||||||||||||| |||||||||  || ||| ||||||||||||    
T  27671172 tcactcgcctccaactcgccatggcgagcagcacaggcgagcaattccag 27671123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 14121808 - 14121896
Alignment:
Q  173 tactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcga 261  Q
    ||||||||||||||| || |||||  || |||||   ||||||||||||| |||||||  || |||| || ||| ||||||||||||||    
T  14121808 tactcgcgaggcgagctaaggcggcctaacctcttcaagctgacgtggcagaaacccataggggaagaaagctcgactcgccatggcga 14121896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 4e-85; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 51 - 325
Target Start/End: Original strand, 36424894 - 36425168
Alignment:
Q  51 tcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaaggcgagc 149  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| ||||||||||||||||||     
T  36424894 tcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagat-ctttcgccaccaactcgcaatggcgagtggaaggcgaga 36424992  T
Q  150 ttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 249  Q
      |||||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36424993 aaactcgccatggcgagtggaatgactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaac 36425092  T
Q  250 tcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36425093 tcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36425168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 46 - 325
Target Start/End: Original strand, 36020896 - 36021175
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagca-ctagttttacattcgccctcaactcgca-tggcgagtggaag 143  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||   ||| | |   | |||  ||||  ||||||||| |||||||||||||    
T  36020896 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagaatgcaacaaagatcaca--cgccaccaactcgcaatggcgagtggaag 36020993  T
Q  144 gcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaac 243  Q
    |||||||||||||||||||| | || | | ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36020994 gcgagcttactcgccatggcgagtggaatgactcgcgaggcgagtgaaggcggtttagcctcttacagctgacgtggcacaaacccaatggcgaaggaac 36021093  T
Q  244 ctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36021094 ctcaactcgccatggcaaatgaatgagctcgcgaggcgagttgatgcagagtcagaattgtataaatagcccactcaaccat 36021175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 6463799 - 6464003
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  6463799 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 6463898  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  6463899 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 6463998  T
Q  321 accat 325  Q
    |||||    
T  6463999 accat 6464003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 7312346 - 7312142
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  7312346 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 7312247  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  7312246 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 7312147  T
Q  321 accat 325  Q
    |||||    
T  7312146 accat 7312142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 181 - 325
Target Start/End: Original strand, 11357467 - 11357611
Alignment:
Q  181 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  11357467 aggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaagtagctcgcgaggc 11357566  T
Q  281 gagttgatacagagtcagaattctataaatagcccactcaaccat 325  Q
    ||||  || |||| ||||||||||||||||||| |||||||||||    
T  11357567 gagtgaatgcagactcagaattctataaatagctcactcaaccat 11357611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 8012543 - 8012747
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  8012543 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 8012642  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||| ||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  8012643 cacaaacccaatggggaagaaacttcaactcgccatggcaaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 8012742  T
Q  321 accat 325  Q
    |||||    
T  8012743 accat 8012747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 36004707 - 36004911
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| || ||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  36004707 caactcgcaatgacgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 36004806  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  36004807 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 36004906  T
Q  321 accat 325  Q
    |||||    
T  36004907 accat 36004911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 122 - 370
Target Start/End: Original strand, 16709904 - 16710163
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| |||||||| ||||||||| ||  ||||| |||| |  |||  |||||||||||||||||||||||||||| || |||||  |||||||||    
T  16709904 caactcgcaatggcgagtagaaggcgagtttgttcgccgtggcgagggaaagtactcgcgaggcgagttagggcggtttaagcttctcattgctgacgtg 16710003  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  || || | |||||||||||||||||||||||||    
T  16710004 gcacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagtagctcgcgaggcgagtgaatgcatactcagaattctataaatagcccactc 16710103  T
Q  320 aaccat---------acttagttttatcttagtttttcatagtttttcacttgtaatatt 370  Q
    ||||||         |||||||||||||||||||| || |||||||||||||||||||||    
T  16710104 aaccatttcaaaaaaacttagttttatcttagtttctcttagtttttcacttgtaatatt 16710163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 122 - 325
Target Start/End: Complemental strand, 36076964 - 36076760
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  36076964 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 36076865  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||  |||| ||| |||||||||||||| |||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  36076864 cacaaacccaatgaggaagaaacttcaactcgccatggtgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 36076765  T
Q  321 accat 325  Q
    |||||    
T  36076764 accat 36076760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 122 - 370
Target Start/End: Complemental strand, 1239201 - 1238942
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggttta-gcctctcacagctgacgtg 219  Q
    ||||||||| ||| |||| |||||||||  |  |||||||||| | ||||  |||||||||||||||||| ||||||||| || | |||| | |||||||    
T  1239201 caactcgcaatggtgagtagaaggcgagtatgttcgccatggcgagtgaaagtactcgcgaggcgagttaaggcggtttaagcttttcactgatgacgtg 1239102  T
Q  220 gcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactc 319  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||| || ||||| | |||| ||||||||||||||| ||    
T  1239101 gcacaaacccaatggtgaaggaacttcaactcgccatggcgaatgaagaagctcgcgaggcgagtagacacagatttagaactctataaatagcccattc 1239002  T
Q  320 aaccat---------acttag-ttttatcttagtttttcatagtttttcacttgtaatatt 370  Q
    || |||         | |||| ||||||||||||||||||||| |||||||||||||||||    
T  1239001 aatcatttctttgggagttagtttttatcttagtttttcatag-ttttcacttgtaatatt 1238942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 152 - 293
Target Start/End: Complemental strand, 12769855 - 12769713
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttag-cctctcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||| ||||| | ||||  ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  12769855 actcgcaatggcgagtgaaagtactcgcgaggcgagttagggtggtttaggcctctcacagatgacgtggcacaaacccaatggtgaaggaacttcaact 12769756  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttgatacaga 293  Q
    |||||||||||||||| |||||||||||| |||| ||| ||||    
T  12769755 cgccatggcgaatgaaggagctcgcgaggtgagtggatgcaga 12769713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 156 - 287
Target Start/End: Complemental strand, 15013343 - 15013211
Alignment:
Q  156 gccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgcc 254  Q
    |||||||| | || || |||| |||||||||||||||||||| ||| ||| |||||| |||||||||||||||||| ||| |||||||  | ||||||||    
T  15013343 gccatggcgagtgcatgtacttgcgaggcgagttagggcggtctagactcctcacagatgacgtggcacaaacccactggtgaaggaatttaaactcgcc 15013244  T
Q  255 atggcgaatgaatgagctcgcgaggcgagttga 287  Q
    |||||||||||| ||||||||||||||||||||    
T  15013243 atggcgaatgaaggagctcgcgaggcgagttga 15013211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 154 - 315
Target Start/End: Original strand, 45067692 - 45067854
Alignment:
Q  154 tcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcg 252  Q
    |||||||||| | ||||||||||||||||||||||||||||||  ||  || ||||  | ||||||||| |||||  ||||| |||| ||| ||||||||    
T  45067692 tcgccatggcgagtgaatttactcgcgaggcgagttagggcggcctaaacttctcaagggtgacgtggctcaaacttaatggtgaagaaacatcaactcg 45067791  T
Q  253 ccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagccc 315  Q
    |||||||||||| |    ||||||||||||||||||  ||| | |||||||||||||||||||    
T  45067792 ccatggcgaatggagttactcgcgaggcgagttgatgtagattaagaattctataaatagccc 45067854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 15013507 - 15013432
Alignment:
Q  156 gccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaaccca 230  Q
    |||||||| | || || |||| |||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||    
T  15013507 gccatggcgagtgcatgtacttgcgaggcgagttagggcggtctagactcctcacagatgacgtggcacaaaccca 15013432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 12769932 - 12769882
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||| ||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  12769932 atcattcgcctccaactcgccatggcgagcatcaaaggcgagcaattccag 12769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 36424826 - 36424876
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  36424826 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 36424876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 6463724 - 6463774
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  6463724 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 6463774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 8012468 - 8012518
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  8012468 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 8012518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 36004632 - 36004682
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  36004632 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 36004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 36077039 - 36076989
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  36077039 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 36076989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 136; Significance: 7e-71; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 46 - 296
Target Start/End: Complemental strand, 8855 - 8605
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccagggagcactagttttacattcgccctcaactcgca-tggcgagtggaagg 144  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||  ||||  |    | | ||||||  ||||||||| |||| |||||||||    
T  8855 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccagtaagcatcaaagatcc-ttcgccaccaactcgcaatggctagtggaagg 8757  T
Q  145 cgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 244  Q
    |||||  |||||||||||| | || | | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8756 cgagcaaactcgccatggcgagtggaatgactcgcaaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacccaatggcgaaggaacc 8657  T
Q  245 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtc 296  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8656 tcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatgcagagtc 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 8918 - 8868
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  8918 atcactcgcctccaactcgccatggcaagcatcaaaggcgagcaattccag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 122 - 325
Target Start/End: Original strand, 4228 - 4432
Alignment:
Q  122 caactcgca-tggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtgg 220  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| |   ||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  4228 caactcgcaatggcgagtagaaggcgagcttactcgccatggcgaatggaaggactcgcgaggcgagtaagggcggtttagcctctaaatgctgacgtgg 4327  T
Q  221 cacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaatgagctcgcgaggcgagttgatacagagtcagaattctataaatagcccactca 320  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  4328 cacaaacccaatggggaagaaacttcaactcgccatggcgaatgaagcagctcgcgaggcgagtgaaggcagactcagaattctataaatagcccactca 4427  T
Q  321 accat 325  Q
    |||||    
T  4428 accat 4432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 4153 - 4203
Alignment:
Q  46 atcactcgcctccaactcgctatggcgagcttcaaaggtgagcaattccag 96  Q
    |||||||||||||||||||| ||||| |||  |||||| ||||||||||||    
T  4153 atcactcgcctccaactcgccatggcaagcagcaaaggcgagcaattccag 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 16116 - 15980
Alignment:
Q  152 actcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctc-tcacagctgacgtggcacaaacccaatggcgaaggaacctcaact 250  Q
    |||||||||||| | || || ||||||||||||||||||||||||  ||| ||| | |||| |||||||||||||||||| ||| |||||||| ||||||    
T  16116 actcgccatggcgagtgcatgtactcgcgaggcgagttagggcggcctagactccttacagatgacgtggcacaaacccactggtgaaggaacttcaact 16017  T
Q  251 cgccatggcgaatgaatgagctcgcgaggcgagttga 287  Q
    |||||||||||||||| ||||||||||||||||||||    
T  16016 cgccatggcgaatgaaggagctcgcgaggcgagttga 15980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 3604 - 3501
Alignment:
Q  168 gaatttactcgcgaggcgagttagggcggtttagcct-ctcacagctgacgtggcacaaacccaatggcgaaggaacctcaactcgccatggcgaatgaa 266  Q
    |||| ||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| |||||||| || ||||||| |||||||||||    
T  3604 gaatgtacccgcgaggcgagttagggcggcttaggcttctcacagctgacgtggcacaaacccaatggtgaaggaacttc-actcgccctggcgaatgaa 3506  T
Q  267 tgagc 271  Q
     ||||    
T  3505 ggagc 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 3486 - 3442
Alignment:
Q  268 gagctcgcgaggcgagttgatacagagtcagaattctataaatag 312  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||    
T  3486 gagctcgcgaggcgagttgatatagaattagaattctataaatag 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 1346 - 1478
Alignment:
Q  129 catggcgagtggaaggcgagcttactcgccatggcaaatgaatttactcgcgaggcgagttagggcggtttagcctctcacagctgacgtggcacaaacc 228  Q
    ||||||||||  | |||||||| ||| |||||||| |   || ||||||||||||||||||| |||||  ||  | |||| | ||||||||||| |||||    
T  1346 catggcgagttcatggcgagctaactagccatggcgagcaaaattactcgcgaggcgagttaaggcggcctaatccctcaaatctgacgtggcagaaacc 1445  T
Q  229 caatggcgaaggaacctcaactcgccatggcga 261  Q
    || |||  ||| || ||||||||||||||||||    
T  1446 cactggtaaagaaagctcaactcgccatggcga 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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