View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10146_low_14 (Length: 334)
Name: NF10146_low_14
Description: NF10146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10146_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 9641797 - 9642121
Alignment:
| Q |
1 |
tgcaaattgagaaattaacttccatattttttgagaggaaattaacttcatacatatacaaa-tataagttttagaatttacattattattttagtaaga |
99 |
Q |
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| T |
9641797 |
tgcaaattgagaaattaacttccatattttttgagaggaaattaacttcatgcatatacaaaatataagttttagaatttacattattattttagtaaga |
9641896 |
T |
|
| Q |
100 |
tgtttatatattactctacctaattggtgagtgcttatccattcctacatgtctt---attgttggtctcatttattattttcattaccaaaatagcaag |
196 |
Q |
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| T |
9641897 |
tatttatatattactctacctaattggtgagtgcttatccattcctacatgtcttcttattgttggtctcatttattattttcattaccaaaatagcaag |
9641996 |
T |
|
| Q |
197 |
caaattaggagattaacttcttacac--acacataaaagaaaaatatttacattcttttttgagtaagatatttacatattactctaactaattggtaag |
294 |
Q |
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||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9641997 |
caaattaagagattaacttcttacacacacacataaaagaaaaatatttacattcttttttgagtaagatatttacatattactctaactaattggtaag |
9642096 |
T |
|
| Q |
295 |
tgcttatccatttttatgtcttatt |
319 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
9642097 |
tgcttatccatttttatgtcttatt |
9642121 |
T |
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