View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10147_1 (Length: 364)
Name: NF10147_1
Description: NF10147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10147_1 |
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Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 34899733 - 34899398
Alignment:
| Q |
1 |
tggtatctcttgcctatcttattataacatttgcatatgcttgtgtggtacgttacgcataaaaaccaagtggaacatgtcaactgacccactaattgag |
100 |
Q |
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| T |
34899733 |
tggtatctcttgcctatcttattataacatttgcatatgcttgtgtggtac-ttacgcataaaaaccaagtggaacatgtcaactgacccactagttgag |
34899635 |
T |
|
| Q |
101 |
gttctcctaataactaagaacatttttagagacacattttcgatattcaattttctgcattcagctaccaactaattatttgtaagtcttagcagacact |
200 |
Q |
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| T |
34899634 |
gttctcctaataactaagaacatttttagagacacattttcgatattcaattttctgcattcagctaccaactaattatttgtaagtcttagcagacact |
34899535 |
T |
|
| Q |
201 |
tcttcatagannnnnnnngttgaagaagtcaaaaattatattaaacgaaaaagagatcccaataaatacaagttgagtttaagaaggatccaaatagcac |
300 |
Q |
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| T |
34899534 |
tcttcatagattttttttgttgaagaagtcaaaaattatattaaacgaaaaagagatcccaataaatacaagttgagtttaagaaggatccaaatagcac |
34899435 |
T |
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| Q |
301 |
cacaagaaacaattagagaagtgtcaaaacaaaaggg |
337 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
34899434 |
cacaagaaacaattagagaagtgtcaaaacaaaaggg |
34899398 |
T |
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