View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10148_high_10 (Length: 296)
Name: NF10148_high_10
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 51406057 - 51405776
Alignment:
| Q |
1 |
ttacgagtgaaatatgcaagaacaggtttgggcaccaaaataaaatagtaaaacatgaattttgtaaacaatgatatataaaattcaaaccatacattgt |
100 |
Q |
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| T |
51406057 |
ttacgagtgaaatatgcaagaacaagtttgggcaccaaaataaaatagtaaaacatgaattttgtaaacaatgatatataaaattcaaaccatacattgt |
51405958 |
T |
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| Q |
101 |
ctggggtacaataatgcgatataaatatccaacaactttaaaatgtcacggatatagactaataaagtgtctaattccgccagtatagtatagtcttgct |
200 |
Q |
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| T |
51405957 |
ctggg-tacaataatgcgatataaatatccaacaactttaaaatgtcacggatatagactaataaagtgtctaattccgccagtatagtatagtcttgct |
51405859 |
T |
|
| Q |
201 |
ctgaaagcttccaaagtcaccttcatttcatttatatatacataaagtacatataaaccatataaataaccaccatcattcct |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51405858 |
ctgaaagcttccaaagtcaccttcatttcatttatatatacataaagtacatataaaccatataaataaccaccatcattcct |
51405776 |
T |
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