View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10148_high_18 (Length: 206)
Name: NF10148_high_18
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 45356564 - 45356396
Alignment:
| Q |
23 |
ccccctcccccaaatgatgatgttgttgatacatatatatggcctctacagtttagcaacctcattctaaaatgtgtatattgtttgatgttgtttcaag |
122 |
Q |
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| T |
45356564 |
ccccctcccccaaatgatgatgttgttgatacatatatatggcctctacagtttagcaacctcattctaaaatgtgtatattgtttgatgttgtttcaag |
45356465 |
T |
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| Q |
123 |
tgtttatatgtgaacctagcagagcgttcaaaatttacaaatggagaaattcaaacatttatgtctgtg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45356464 |
tgtttatatgtgaacctagcagagcgttcaaaatttacaaatggagaaattcaaacatttatgtctgtg |
45356396 |
T |
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