View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10148_high_7 (Length: 332)
Name: NF10148_high_7
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 16 - 328
Target Start/End: Complemental strand, 27739466 - 27739149
Alignment:
| Q |
16 |
ctaacatcttgatgatgttgcacagaatgagcctgcataaattggctgagaatctgaaaagaaaaaataatgtcagactagtgtcatagtgataaaatat |
115 |
Q |
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| T |
27739466 |
ctaacatcttgatgatgttgcacagaatgagcctgcataaattggctgagaatctgaaaagaaaaaataatgtcagactagtgtcataatgataaaatat |
27739367 |
T |
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| Q |
116 |
aagagacattaattgatctatcataaaatgctcagttataataagacatttttgg-----ttagatgattttgttattatgaatacaaaagagaatcttt |
210 |
Q |
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| T |
27739366 |
aagagacattaattgatctatcataaaatgctcagttataataagacatttttggttaggttagatgattttgttattatgaatacaaaagagaatcttt |
27739267 |
T |
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| Q |
211 |
tgcaaggagttagacataactaaatttgaggaatttaagtgacatgtggcatgtgattcaataggcaatgattggtgtgtagaaaattgatgagaatctc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27739266 |
tgcaaggagttagacataactaaatttgaggaatttaagtgacatgtggcatgtgattcaataggcaatgattggtgtgtagaaaattgatgagaatctc |
27739167 |
T |
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| Q |
311 |
tttttccctttgcttctc |
328 |
Q |
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||||||| |||| ||||| |
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| T |
27739166 |
tttttccttttgattctc |
27739149 |
T |
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