View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10148_low_21 (Length: 367)

Name: NF10148_low_21
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10148_low_21
NF10148_low_21
[»] chr4 (78 HSPs)
chr4 (15-227)||(26552328-26552541)
chr4 (230-354)||(31268960-31269068)
chr4 (228-356)||(51697837-51697953)
chr4 (232-354)||(8693639-8693745)
chr4 (232-354)||(31273449-31273555)
chr4 (232-289)||(55810257-55810314)
chr4 (292-354)||(5271480-5271542)
chr4 (227-354)||(37264625-37264736)
chr4 (232-354)||(37259938-37260044)
chr4 (232-292)||(19106547-19106607)
chr4 (232-292)||(32082197-32082257)
chr4 (299-354)||(13522053-13522108)
chr4 (292-354)||(33463417-33463479)
chr4 (232-289)||(32221207-32221264)
chr4 (232-292)||(8030583-8030643)
chr4 (299-354)||(12823956-12824011)
chr4 (232-298)||(12823996-12824062)
chr4 (292-354)||(16421001-16421063)
chr4 (292-354)||(47574597-47574659)
chr4 (292-353)||(5928281-5928342)
chr4 (299-356)||(13065827-13065884)
chr4 (291-352)||(19906222-19906283)
chr4 (293-354)||(31765859-31765920)
chr4 (235-292)||(33469080-33469137)
chr4 (232-292)||(5928326-5928386)
chr4 (248-296)||(13059354-13059402)
chr4 (232-292)||(16420958-16421017)
chr4 (232-284)||(19101905-19101957)
chr4 (302-354)||(42758816-42758868)
chr4 (303-354)||(12878222-12878273)
chr4 (232-291)||(31729479-31729538)
chr4 (292-354)||(13059382-13059444)
chr4 (292-354)||(47244220-47244282)
chr4 (232-292)||(5271526-5271584)
chr4 (292-353)||(8030538-8030599)
chr4 (292-353)||(33469035-33469096)
chr4 (307-356)||(51696989-51697038)
chr4 (303-354)||(55251703-55251753)
chr4 (294-356)||(1151357-1151419)
chr4 (307-349)||(32221163-32221205)
chr4 (299-356)||(19106598-19106655)
chr4 (248-292)||(47244192-47244236)
chr4 (232-284)||(55251649-55251700)
chr4 (319-354)||(653043-653078)
chr4 (315-354)||(10120869-10120908)
chr4 (236-279)||(23093112-23093155)
chr4 (319-354)||(36354176-36354211)
chr4 (319-354)||(36359294-36359329)
chr4 (319-354)||(39999069-39999104)
chr4 (319-354)||(40004027-40004062)
chr4 (319-354)||(54343203-54343238)
chr4 (319-354)||(54348357-54348392)
chr4 (303-349)||(12874522-12874568)
chr4 (316-354)||(24490028-24490066)
chr4 (235-276)||(13065916-13065957)
chr4 (232-276)||(13522115-13522160)
chr4 (246-298)||(47574566-47574619)
chr4 (302-354)||(2819826-2819878)
chr4 (235-275)||(48276762-48276802)
chr4 (299-354)||(6070566-6070621)
chr4 (232-278)||(8652129-8652176)
chr4 (232-278)||(8663936-8663983)
chr4 (319-354)||(8980345-8980380)
chr4 (319-354)||(8985465-8985500)
chr4 (319-354)||(13700510-13700545)
chr4 (319-354)||(21299893-21299928)
chr4 (316-355)||(39319628-39319667)
chr4 (319-354)||(41393245-41393280)
chr4 (314-353)||(48276706-48276745)
chr4 (319-354)||(51019433-51019468)
chr4 (319-354)||(53797629-53797664)
chr4 (319-354)||(54991486-54991521)
chr4 (321-355)||(8083087-8083121)
chr4 (316-354)||(10318840-10318878)
chr4 (304-354)||(19101961-19102011)
chr4 (316-349)||(34560494-34560527)
chr4 (312-353)||(40408190-40408231)
chr4 (316-348)||(3998123-3998155)
[»] chr7 (52 HSPs)
chr7 (232-353)||(10388427-10388544)
chr7 (292-354)||(4930205-4930267)
chr7 (232-292)||(8268221-8268281)
chr7 (299-354)||(3357693-3357748)
chr7 (299-354)||(9651028-9651083)
chr7 (292-354)||(26341171-26341233)
chr7 (235-292)||(4930164-4930221)
chr7 (228-354)||(13314297-13314407)
chr7 (232-292)||(44423244-44423305)
chr7 (302-354)||(4579490-4579542)
chr7 (241-292)||(26341136-26341187)
chr7 (292-354)||(42627258-42627321)
chr7 (233-292)||(42627305-42627364)
chr7 (292-354)||(8076022-8076084)
chr7 (303-353)||(27238225-27238275)
chr7 (292-353)||(44510739-44510800)
chr7 (232-353)||(26287220-26287337)
chr7 (232-292)||(30256782-30256842)
chr7 (299-354)||(23246994-23247049)
chr7 (299-354)||(29150913-29150968)
chr7 (303-354)||(16372381-16372432)
chr7 (295-354)||(25543423-25543482)
chr7 (232-285)||(8075977-8076031)
chr7 (299-353)||(9008142-9008196)
chr7 (304-354)||(44423198-44423248)
chr7 (317-354)||(23866065-23866102)
chr7 (316-353)||(24528351-24528388)
chr7 (318-353)||(8268291-8268326)
chr7 (302-353)||(12254061-12254112)
chr7 (319-354)||(33238002-33238037)
chr7 (319-354)||(47998975-47999010)
chr7 (316-354)||(9973459-9973497)
chr7 (232-289)||(3879924-3879981)
chr7 (232-276)||(9651090-9651135)
chr7 (321-354)||(33226416-33226449)
chr7 (319-355)||(43892858-43892894)
chr7 (252-292)||(44510784-44510824)
chr7 (236-279)||(15642154-15642197)
chr7 (319-354)||(16539472-16539507)
chr7 (319-354)||(16626155-16626190)
chr7 (319-354)||(21081101-21081136)
chr7 (232-279)||(21671111-21671158)
chr7 (319-354)||(32212714-32212749)
chr7 (319-354)||(33243179-33243214)
chr7 (319-354)||(42571945-42571980)
chr7 (319-354)||(47177179-47177214)
chr7 (319-354)||(47993800-47993835)
chr7 (303-353)||(21671178-21671228)
chr7 (292-354)||(30256826-30256888)
chr7 (316-349)||(27256239-27256272)
chr7 (234-273)||(6591083-6591123)
chr7 (249-292)||(23866023-23866067)
[»] chr3 (67 HSPs)
chr3 (232-356)||(3672512-3672620)
chr3 (232-356)||(3692544-3692652)
chr3 (232-354)||(7571279-7571385)
chr3 (227-354)||(23666184-23666295)
chr3 (227-354)||(24038432-24038543)
chr3 (232-354)||(39775789-39775895)
chr3 (292-356)||(3033614-3033678)
chr3 (232-354)||(8069605-8069712)
chr3 (232-292)||(29350166-29350226)
chr3 (230-298)||(29715568-29715636)
chr3 (235-354)||(758429-758532)
chr3 (292-354)||(18467195-18467257)
chr3 (292-353)||(8887900-8887961)
chr3 (232-292)||(23661557-23661617)
chr3 (291-354)||(49971485-49971548)
chr3 (292-354)||(3418965-3419027)
chr3 (292-354)||(8883140-8883202)
chr3 (292-354)||(14438756-14438818)
chr3 (292-354)||(27708848-27708910)
chr3 (235-292)||(3033573-3033630)
chr3 (232-292)||(3418920-3418981)
chr3 (232-354)||(20519980-20520086)
chr3 (232-292)||(3657347-3657407)
chr3 (236-292)||(8883100-8883156)
chr3 (236-292)||(8887860-8887916)
chr3 (232-354)||(12112702-12112820)
chr3 (228-292)||(12965980-12966044)
chr3 (232-292)||(14438802-14438862)
chr3 (233-354)||(55431242-55431347)
chr3 (299-354)||(29715621-29715676)
chr3 (292-345)||(18471978-18472031)
chr3 (232-292)||(18467151-18467211)
chr3 (232-292)||(18471934-18471994)
chr3 (299-354)||(29350217-29350272)
chr3 (299-353)||(12965935-12965989)
chr3 (292-353)||(2207769-2207830)
chr3 (302-354)||(12971694-12971746)
chr3 (292-354)||(3657301-3657363)
chr3 (316-354)||(33089403-33089441)
chr3 (236-281)||(27708808-27708853)
chr3 (232-292)||(2207814-2207874)
chr3 (318-354)||(25726854-25726890)
chr3 (252-292)||(32474785-32474825)
chr3 (319-354)||(15763090-15763125)
chr3 (319-354)||(15768251-15768286)
chr3 (236-279)||(16013650-16013693)
chr3 (319-354)||(20090722-20090757)
chr3 (319-354)||(20095847-20095882)
chr3 (292-354)||(32474741-32474801)
chr3 (232-271)||(49971552-49971591)
chr3 (232-353)||(17026167-17026284)
chr3 (316-354)||(20810369-20810407)
chr3 (316-354)||(26962056-26962094)
chr3 (316-354)||(53119524-53119562)
chr3 (319-354)||(3477006-3477041)
chr3 (319-354)||(17364063-17364098)
chr3 (319-354)||(17368719-17368754)
chr3 (315-354)||(27605196-27605235)
chr3 (319-354)||(34129229-34129264)
chr3 (316-355)||(53358239-53358278)
chr3 (316-354)||(13022024-13022062)
chr3 (318-348)||(21494369-21494399)
chr3 (321-354)||(10321444-10321477)
chr3 (316-349)||(10586248-10586281)
chr3 (321-353)||(1688948-1688980)
chr3 (315-355)||(7806611-7806651)
chr3 (302-354)||(28125097-28125148)
[»] scaffold0352 (1 HSPs)
scaffold0352 (232-354)||(7032-7138)
[»] chr8 (49 HSPs)
chr8 (232-354)||(40130747-40130853)
chr8 (232-354)||(17025863-17025969)
chr8 (232-354)||(17556355-17556461)
chr8 (235-356)||(4238374-4238479)
chr8 (232-354)||(31449927-31450033)
chr8 (232-354)||(33416475-33416581)
chr8 (235-356)||(4243113-4243218)
chr8 (232-292)||(19915075-19915135)
chr8 (292-356)||(34118438-34118502)
chr8 (232-292)||(38182343-38182403)
chr8 (299-354)||(24090606-24090661)
chr8 (292-354)||(1807444-1807506)
chr8 (232-298)||(1911070-1911136)
chr8 (232-292)||(18876473-18876533)
chr8 (294-354)||(19166608-19166668)
chr8 (294-354)||(44925984-44926044)
chr8 (295-354)||(40125946-40126005)
chr8 (292-354)||(18876428-18876489)
chr8 (231-292)||(28559761-28559822)
chr8 (232-292)||(1807400-1807460)
chr8 (302-354)||(1911030-1911082)
chr8 (299-354)||(23548693-23548748)
chr8 (292-354)||(28559715-28559777)
chr8 (292-354)||(36683551-36683613)
chr8 (299-354)||(17953934-17953989)
chr8 (316-354)||(19430011-19430049)
chr8 (316-354)||(19435513-19435551)
chr8 (316-354)||(19566160-19566198)
chr8 (316-354)||(19571662-19571700)
chr8 (316-354)||(31030525-31030563)
chr8 (232-278)||(43302832-43302878)
chr8 (232-285)||(34118394-34118447)
chr8 (318-354)||(33616787-33616823)
chr8 (315-354)||(13584346-13584385)
chr8 (319-354)||(32015700-32015735)
chr8 (315-354)||(38182298-38182337)
chr8 (303-354)||(43302780-43302831)
chr8 (318-352)||(15951584-15951618)
chr8 (238-292)||(28565276-28565330)
chr8 (238-292)||(28572899-28572953)
chr8 (232-354)||(2965547-2965664)
chr8 (302-354)||(15875729-15875781)
chr8 (294-353)||(29220240-29220297)
chr8 (295-354)||(24673386-24673445)
chr8 (236-278)||(10933371-10933413)
chr8 (310-354)||(30777078-30777123)
chr8 (316-349)||(34818764-34818797)
chr8 (316-349)||(37771708-37771741)
chr8 (232-276)||(44926046-44926090)
[»] chr2 (55 HSPs)
chr2 (232-354)||(1935054-1935160)
chr2 (232-354)||(19892527-19892633)
chr2 (232-354)||(9189864-9189970)
chr2 (232-354)||(30650857-30650963)
chr2 (232-354)||(25478358-25478468)
chr2 (292-356)||(31326711-31326775)
chr2 (292-354)||(9180785-9180847)
chr2 (292-354)||(10160785-10160847)
chr2 (236-354)||(28603230-28603332)
chr2 (236-353)||(19578476-19578589)
chr2 (232-292)||(30631507-30631567)
chr2 (232-292)||(42926868-42926927)
chr2 (292-354)||(25497386-25497448)
chr2 (292-354)||(30658235-30658297)
chr2 (292-353)||(12796897-12796958)
chr2 (232-354)||(18344359-18344465)
chr2 (232-292)||(9180831-9180891)
chr2 (232-292)||(10160831-10160891)
chr2 (232-292)||(29677696-29677755)
chr2 (232-292)||(30658191-30658251)
chr2 (232-292)||(35601850-35601910)
chr2 (232-292)||(35639104-35639164)
chr2 (232-353)||(40847657-40847777)
chr2 (292-354)||(35601894-35601956)
chr2 (232-292)||(31326667-31326727)
chr2 (299-353)||(19094557-19094611)
chr2 (292-354)||(29677353-29677415)
chr2 (300-353)||(7737913-7737966)
chr2 (232-331)||(20711360-20711456)
chr2 (302-349)||(29677749-29677796)
chr2 (292-354)||(35639058-35639120)
chr2 (299-349)||(42926827-42926877)
chr2 (235-292)||(29677313-29677369)
chr2 (236-292)||(7737958-7738014)
chr2 (232-292)||(15489821-15489881)
chr2 (232-283)||(12796853-12796904)
chr2 (319-354)||(42723511-42723546)
chr2 (319-354)||(42728680-42728715)
chr2 (319-354)||(44096302-44096337)
chr2 (319-354)||(44754656-44754691)
chr2 (319-354)||(44759822-44759857)
chr2 (316-354)||(42914639-42914677)
chr2 (314-355)||(160035-160076)
chr2 (292-333)||(15489796-15489837)
chr2 (318-355)||(39542900-39542937)
chr2 (318-354)||(5089277-5089313)
chr2 (316-355)||(19538382-19538421)
chr2 (299-346)||(30631558-30631605)
chr2 (228-279)||(35404848-35404899)
chr2 (319-354)||(40518532-40518567)
chr2 (316-349)||(6297951-6297984)
chr2 (305-346)||(21523788-21523829)
chr2 (232-272)||(25497456-25497496)
chr2 (300-348)||(32079358-32079406)
chr2 (315-355)||(39542565-39542605)
[»] chr6 (47 HSPs)
chr6 (228-292)||(12688895-12688959)
chr6 (291-354)||(11428014-11428077)
chr6 (232-356)||(19674241-19674349)
chr6 (232-292)||(6407967-6408027)
chr6 (233-292)||(17964637-17964696)
chr6 (232-352)||(8747710-8747814)
chr6 (232-354)||(11534739-11534845)
chr6 (232-354)||(11560249-11560355)
chr6 (292-354)||(11570810-11570872)
chr6 (232-354)||(12406414-12406530)
chr6 (299-354)||(2700167-2700222)
chr6 (242-292)||(11570856-11570906)
chr6 (294-354)||(33687664-33687724)
chr6 (299-354)||(6407921-6407976)
chr6 (232-292)||(21308962-21309019)
chr6 (300-353)||(12688951-12689004)
chr6 (228-353)||(29892323-29892443)
chr6 (310-354)||(12183061-12183105)
chr6 (292-356)||(21309003-21309067)
chr6 (295-354)||(13736739-13736798)
chr6 (316-354)||(19478145-19478183)
chr6 (232-298)||(33687704-33687770)
chr6 (232-292)||(2700213-2700274)
chr6 (296-349)||(2882821-2882874)
chr6 (316-353)||(3901909-3901946)
chr6 (310-354)||(5601033-5601077)
chr6 (316-356)||(11956760-11956800)
chr6 (304-356)||(20748343-20748395)
chr6 (319-354)||(22698303-22698338)
chr6 (235-354)||(24589225-24589342)
chr6 (292-353)||(25316628-25316689)
chr6 (292-353)||(26204122-26204183)
chr6 (302-353)||(2760304-2760355)
chr6 (319-354)||(21396699-21396734)
chr6 (319-354)||(21401755-21401790)
chr6 (236-279)||(22609487-22609530)
chr6 (319-354)||(24191443-24191478)
chr6 (319-354)||(24192540-24192575)
chr6 (319-354)||(31981560-31981595)
chr6 (319-354)||(34142080-34142115)
chr6 (319-354)||(34154696-34154731)
chr6 (303-349)||(2863518-2863564)
chr6 (316-354)||(13605152-13605190)
chr6 (294-332)||(22609548-22609586)
chr6 (319-352)||(6728397-6728430)
chr6 (232-289)||(25316676-25316737)
chr6 (232-289)||(26204170-26204231)
[»] chr5 (62 HSPs)
chr5 (292-356)||(36937570-36937634)
chr5 (232-354)||(7451686-7451792)
chr5 (232-354)||(29168034-29168140)
chr5 (232-354)||(36423565-36423671)
chr5 (232-354)||(37652891-37652997)
chr5 (232-354)||(39518338-39518444)
chr5 (232-354)||(42001362-42001468)
chr5 (232-353)||(556623-556728)
chr5 (232-353)||(561395-561500)
chr5 (292-356)||(36942324-36942388)
chr5 (232-292)||(37550108-37550168)
chr5 (292-354)||(26667244-26667306)
chr5 (292-354)||(26938841-26938903)
chr5 (235-292)||(11981386-11981443)
chr5 (235-353)||(36428640-36428742)
chr5 (232-354)||(37248856-37248962)
chr5 (232-354)||(41996593-41996699)
chr5 (232-353)||(10759882-10759990)
chr5 (292-354)||(12045200-12045262)
chr5 (292-354)||(12102997-12103059)
chr5 (232-354)||(12501960-12502067)
chr5 (292-354)||(39523021-39523083)
chr5 (232-292)||(12102952-12103013)
chr5 (292-354)||(6155480-6155542)
chr5 (292-354)||(20181124-20181186)
chr5 (292-354)||(41587221-41587283)
chr5 (236-289)||(6155529-6155582)
chr5 (232-292)||(12045246-12045307)
chr5 (236-292)||(6514708-6514764)
chr5 (232-292)||(26667200-26667260)
chr5 (232-292)||(26938797-26938857)
chr5 (232-354)||(35679936-35680045)
chr5 (232-292)||(41587267-41587327)
chr5 (299-354)||(3665911-3665966)
chr5 (292-354)||(6514662-6514724)
chr5 (299-349)||(12102897-12102947)
chr5 (292-354)||(40147867-40147929)
chr5 (232-284)||(39522976-39523029)
chr5 (237-298)||(40147828-40147889)
chr5 (316-354)||(14374132-14374170)
chr5 (232-285)||(20181177-20181231)
chr5 (232-292)||(3665859-3665920)
chr5 (317-353)||(32461611-32461647)
chr5 (252-292)||(36937618-36937658)
chr5 (252-292)||(36942372-36942412)
chr5 (294-354)||(12041993-12042055)
chr5 (319-354)||(13582750-13582785)
chr5 (319-354)||(24435929-24435964)
chr5 (234-291)||(32461648-32461702)
chr5 (316-354)||(7805068-7805106)
chr5 (232-292)||(12042041-12042099)
chr5 (319-354)||(17510058-17510093)
chr5 (319-354)||(26709102-26709137)
chr5 (319-354)||(26978836-26978871)
chr5 (319-354)||(36253826-36253861)
chr5 (319-354)||(41853548-41853583)
chr5 (319-354)||(42019573-42019608)
chr5 (315-349)||(13301551-13301585)
chr5 (231-276)||(12104205-12104250)
chr5 (316-349)||(31731540-31731573)
chr5 (237-281)||(13291447-13291491)
chr5 (319-355)||(41858593-41858629)
[»] chr1 (57 HSPs)
chr1 (235-356)||(3094045-3094150)
chr1 (232-354)||(23192878-23192984)
chr1 (232-354)||(25855099-25855205)
chr1 (232-354)||(47455447-47455553)
chr1 (232-292)||(16649719-16649779)
chr1 (235-298)||(38620624-38620687)
chr1 (292-354)||(10135428-10135490)
chr1 (232-292)||(19799120-19799180)
chr1 (232-292)||(25843740-25843800)
chr1 (232-292)||(26927829-26927889)
chr1 (232-292)||(51041568-51041628)
chr1 (232-356)||(47451284-47451392)
chr1 (292-354)||(40165952-40166014)
chr1 (232-292)||(40165908-40165968)
chr1 (232-354)||(16035530-16035642)
chr1 (292-354)||(10140061-10140123)
chr1 (232-284)||(33301295-33301347)
chr1 (299-354)||(26927783-26927838)
chr1 (232-285)||(16832029-16832082)
chr1 (232-292)||(10135384-10135444)
chr1 (302-354)||(11806341-11806393)
chr1 (302-354)||(19799074-19799126)
chr1 (232-279)||(46696598-46696645)
chr1 (299-353)||(8900233-8900287)
chr1 (316-354)||(10106100-10106138)
chr1 (316-354)||(38734272-38734310)
chr1 (300-354)||(39588428-39588482)
chr1 (232-354)||(12259913-12260030)
chr1 (316-353)||(13890810-13890847)
chr1 (232-289)||(39588477-39588534)
chr1 (317-353)||(16649674-16649710)
chr1 (304-352)||(16832085-16832133)
chr1 (229-292)||(18784655-18784719)
chr1 (316-355)||(8267890-8267929)
chr1 (232-279)||(28434705-28434752)
chr1 (319-354)||(36684775-36684810)
chr1 (316-354)||(5602485-5602523)
chr1 (232-274)||(8900164-8900206)
chr1 (304-354)||(33301241-33301291)
chr1 (316-354)||(39747225-39747263)
chr1 (302-354)||(18784610-18784661)
chr1 (310-354)||(38620683-38620727)
chr1 (319-354)||(3584601-3584636)
chr1 (314-353)||(4632988-4633027)
chr1 (319-354)||(5724979-5725014)
chr1 (319-354)||(5730105-5730140)
chr1 (319-354)||(11251173-11251208)
chr1 (231-270)||(11806270-11806309)
chr1 (319-354)||(27716443-27716478)
chr1 (319-354)||(34318284-34318319)
chr1 (319-354)||(37404476-37404511)
chr1 (319-354)||(37409597-37409632)
chr1 (316-354)||(19422938-19422976)
chr1 (316-353)||(26651227-26651264)
chr1 (316-349)||(41098017-41098050)
chr1 (317-354)||(51041523-51041559)
chr1 (232-292)||(10140017-10140077)
[»] scaffold0182 (1 HSPs)
scaffold0182 (232-354)||(9948-10054)
[»] scaffold0002 (3 HSPs)
scaffold0002 (232-354)||(4002-4108)
scaffold0002 (232-292)||(444039-444099)
scaffold0002 (292-329)||(444018-444055)
[»] scaffold0045 (1 HSPs)
scaffold0045 (299-354)||(83045-83100)
[»] scaffold0054 (2 HSPs)
scaffold0054 (232-292)||(25327-25387)
scaffold0054 (302-352)||(25381-25431)
[»] scaffold0057 (2 HSPs)
scaffold0057 (235-292)||(35565-35622)
scaffold0057 (292-354)||(35606-35668)
[»] scaffold0240 (1 HSPs)
scaffold0240 (232-349)||(3906-4020)
[»] scaffold0097 (1 HSPs)
scaffold0097 (232-331)||(15199-15295)
[»] scaffold0012 (2 HSPs)
scaffold0012 (299-354)||(166147-166202)
scaffold0012 (232-289)||(166196-166254)
[»] scaffold0067 (1 HSPs)
scaffold0067 (316-354)||(34029-34067)
[»] scaffold0184 (1 HSPs)
scaffold0184 (296-353)||(2285-2342)
[»] scaffold0055 (1 HSPs)
scaffold0055 (319-354)||(3058-3093)
[»] scaffold0052 (1 HSPs)
scaffold0052 (319-354)||(81442-81477)
[»] scaffold0132 (2 HSPs)
scaffold0132 (316-354)||(2832-2870)
scaffold0132 (316-354)||(10792-10830)
[»] scaffold0011 (2 HSPs)
scaffold0011 (316-354)||(1562-1600)
scaffold0011 (316-354)||(7043-7081)
[»] scaffold2020 (1 HSPs)
scaffold2020 (232-276)||(285-329)
[»] scaffold0009 (1 HSPs)
scaffold0009 (232-276)||(165166-165210)
[»] scaffold0594 (1 HSPs)
scaffold0594 (319-354)||(9268-9303)
[»] scaffold0517 (1 HSPs)
scaffold0517 (319-354)||(3563-3598)
[»] scaffold0166 (1 HSPs)
scaffold0166 (319-354)||(13800-13835)
[»] scaffold0060 (1 HSPs)
scaffold0060 (319-354)||(37010-37045)
[»] scaffold0014 (1 HSPs)
scaffold0014 (319-354)||(31545-31580)
[»] scaffold0020 (1 HSPs)
scaffold0020 (316-349)||(1291-1324)


Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 26552541 - 26552328
Alignment:
Q  15 atatcttcttcgtgtttcattcaattttaattagacaacc-attaatcaaaagtgggggataatgatttcaatcaaatcattattagaaatgttatgtta 113  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26552541 atatcttcttcgtgtttcattcaattttaattagacaacccattaatcaaaagtgggggatattgatttcaatcaaatcattattagaaatgttatgtta 26552442  T
Q  114 gttggacattgaatgagcttgcatgttgaacttagggtctgtttggcaaacaacatatttgagtgtcaagcttattcgtacattgaatgagcttgcattt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26552441 gttggacattgaatgagcttgcatgttgaacttagggtctgtttggcaaacaacatatttgagtgtcaagcttattcgtacattgaatgagcttgcattt 26552342  T
Q  214 tggacttaaggtcg 227  Q
    |||||||| |||||    
T  26552341 tggacttagggtcg 26552328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 354
Target Start/End: Original strand, 31268960 - 31269068
Alignment:
Q  230 tattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgac 329  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||    
T  31268960 tattgtttttgaatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgac 31269043  T
Q  330 caggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||    
T  31269044 caggtcgctctctttaagacgtttc 31269068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 228 - 356
Target Start/End: Original strand, 51697837 - 51697953
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacg 327  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |           ||||| |||||||||||||| ||||||||||||||    
T  51697837 attattgtttttggattttcaaactattgtatttggatttccaaattc-attct-----------attatctaccgaagttgttactaggttgagtcacg 51697924  T
Q  328 accaggtcgctctctttaagacgtttcat 356  Q
    ||||| ||||||| |||||||||||||||    
T  51697925 accagatcgctctttttaagacgtttcat 51697953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 8693639 - 8693745
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||                || ||||||||||| ||||||||||||||||||    
T  8693639 ttgtttttggattttcaaactgttgtatttggatttccaaattctattgtc----------------tatcgaagttgttactaggttgagtcacgacca 8693722  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  8693723 ggtcgctctctttaagacgtttc 8693745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 31273449 - 31273555
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  31273449 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 31273532  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  31273533 ggtcgctctctttaagacgtttc 31273555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 55810314 - 55810257
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55810314 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 5271542 - 5271480
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5271542 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 5271480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 37264736 - 37264625
Alignment:
Q  227 gattattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcac 326  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||                |||| |||||||||||||    
T  37264736 gattgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctatcgaagtt----------------gttactaggttgagtcac 37264653  T
Q  327 gaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||    
T  37264652 gaccaggtcgctctctttaagacgtttc 37264625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 37260044 - 37259938
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  37260044 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 37259961  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    ||||||| |||||||||||||||    
T  37259960 ggtcgctttctttaagacgtttc 37259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 19106547 - 19106607
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  19106547 ttgtttttggattttcaaattgctgtatttggatttccaaattctattatctaccgaagtt 19106607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 32082257 - 32082197
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  32082257 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatcaaccgaagtt 32082197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 13522108 - 13522053
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13522108 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 13522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 33463479 - 33463417
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33463479 tattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 33463417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 32221264 - 32221207
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 289  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32221264 ttgtttttggattttcaaattgttgtatttggattttcaaattctattatctaccgaa 32221207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 8030643 - 8030583
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8030643 ttgtttttgaattttcaaactgttgtatttgaattttcaaattctattatctaccgaagtt 8030583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 12824011 - 12823956
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  12824011 taccgaagttgttattaggttgagtcatgaccaggtcgctctctttaagacatttc 12823956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 12824062 - 12823996
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  12824062 ttgttttttgatttctaaactgttgtatttggatttccaaattctattttctaccgaagttgttatt 12823996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 16421001 - 16421063
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  16421001 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcattaagacatttc 16421063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 47574597 - 47574659
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  47574597 tattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttc 47574659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 5928342 - 5928281
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  5928342 tattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctctttaagatgttt 5928281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 13065884 - 13065827
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  13065884 taccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcat 13065827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 19906222 - 19906283
Alignment:
Q  291 ttattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtt 352  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  19906222 ttattatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgtt 19906283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 31765859 - 31765920
Alignment:
Q  293 attatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  31765859 attatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttc 31765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 33469137 - 33469080
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttcaaattctattatctactgaagtt 33469080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 5928386 - 5928326
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  5928386 ttgtttttagatttccaaactgttgtatttggagtttcaaattctattatctaccgaagtt 5928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 13059354 - 13059402
Alignment:
Q  248 aaactgttgtatttggatttccaaattctattatctaccgaagttatta 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13059354 aaactgttgtatttggattttcaaattctattatctaccgaagttatta 13059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 16420958 - 16421017
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  16420958 ttgtttttggatttccaaactgttgtatttagatttcc-aattctattatctaccgaagtt 16421017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 19101905 - 19101957
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatcta 284  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  19101905 ttgtttttggatttataaactgttgtatttggatttccaaattctattatcta 19101957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 42758868 - 42758816
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttc 42758816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 12878222 - 12878273
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12878222 gaagttgttactaggttgagtcacgatcaggtcgctctctttaagacgtttc 12878273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 31729538 - 31729479
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagt 291  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||    
T  31729538 ttgtttttggatttccaaactgctgtatttggatttccaagttctattatctactgaagt 31729479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 13059382 - 13059444
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||    
T  13059382 tattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttc 13059444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 47244220 - 47244282
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| || ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  47244220 tattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttc 47244282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 5271584 - 5271526
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||    
T  5271584 ttgtttttggatttccaaactgtt--atttgaatttccaaattctattatctaccgaagtt 5271526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 8030599 - 8030538
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| |||||||||||||| |||||||| |||| | ||||||||||||||||||||||||    
T  8030599 tattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctctttaagacgttt 8030538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 33469096 - 33469035
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| ||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  33469096 tattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagacgttt 33469035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 51696989 - 51697038
Alignment:
Q  307 ttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  51696989 ttgttactaggttgagtcacgaccaggtcgctctccttaagacgtttcat 51697038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 55251703 - 55251753
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  55251703 gaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttc 55251753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 1151419 - 1151357
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    ||||||| ||||||||||| ||||||||||| ||| ||| || ||||||||||||||||||||    
T  1151419 ttatttatcgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcat 1151357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 349
Target Start/End: Complemental strand, 32221205 - 32221163
Alignment:
Q  307 ttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  32221205 ttgttactaggttgagtcacgaccaggtcgctctctttaagac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 19106598 - 19106655
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||||||||||| ||||||||||||| | ||| ||||| |||||||||||||||||    
T  19106598 taccgaagttgttactaggttgagtcacaagcagatcgctttctttaagacgtttcat 19106655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 47244192 - 47244236
Alignment:
Q  248 aaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  47244192 aaactgttgtatttggatttccaaattatattatctatcgaagtt 47244236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 55251649 - 55251700
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatcta 284  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  55251649 ttgtttttcgatttccaaactgttgtatttggatttcc-aattctattatcta 55251700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 653043 - 653078
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttc 653078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 10120908 - 10120869
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  10120908 aggttgagtcacgatcaggtcgctctctttaagacgtttc 10120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 23093112 - 23093155
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  23093112 ttttggatttcaaaactgttgtatttggatttccaaattctatt 23093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 36354176 - 36354211
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttc 36354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 36359294 - 36359329
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttc 36359329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 39999069 - 39999104
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttc 39999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 40004027 - 40004062
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttc 40004062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 54343203 - 54343238
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttc 54343238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 54348357 - 54348392
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttc 54348392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Original strand, 12874522 - 12874568
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||    
T  12874522 gaagttgttattaggttgagtcacaatcagatcgctctctttaagac 12874568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 24490028 - 24490066
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttc 24490066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 13065957 - 13065916
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattct 276  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  13065957 tttttgaattttcaaactgttgtattttgatttccaaattct 13065916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 13522160 - 13522115
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattct 276  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  13522160 ttgtttttggattttcaaactgttgtattttggttttccaaattct 13522115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 47574566 - 47574619
Alignment:
Q  246 tcaaactgttgtatttggattt-ccaaattctattatctaccgaagttattatt 298  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| || |||||    
T  47574566 tcaaactgttgtattttgattttccaaattctattatctaccgaatttgttatt 47574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 2819826 - 2819878
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| ||| ||||||||||||||||||| | ||||||||| |||||    
T  2819826 cgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttc 2819878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 48276802 - 48276762
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattc 275  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  48276802 tttttggatttttaaattgttgtatttggatttccaaattc 48276762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 6070566 - 6070621
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| ||||||||| ||| |||||||| |||||| ||||||||||||||| |||||    
T  6070566 taccaaagttgttactagattgagtcatgaccagatcgctctctttaagatgtttc 6070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8652176 - 8652129
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttgga-tttccaaattctat 278  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||    
T  8652176 ttgtttttggatttccaaactgttgtattttgattttccaaattctat 8652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8663983 - 8663936
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttgga-tttccaaattctat 278  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||    
T  8663983 ttgtttttggatttccaaactgttgtattttgattttccaaattctat 8663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 8980380 - 8980345
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttc 8980345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 8985500 - 8985465
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttc 8985465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 13700510 - 13700545
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttc 13700545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 21299928 - 21299893
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttc 21299893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 39319628 - 39319667
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttca 39319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 41393245 - 41393280
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttc 41393280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 48276745 - 48276706
Alignment:
Q  314 taggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  48276745 taggttgaatcacgatcaggtcgctctctttaagacgttt 48276706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 51019468 - 51019433
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttc 51019433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 53797629 - 53797664
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttc 53797664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 54991486 - 54991521
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttc 54991521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 8083121 - 8083087
Alignment:
Q  321 agtcacgaccaggtcgctctctttaagacgtttca 355  Q
    |||||||| ||||||||||||||||||||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttca 8083087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 10318878 - 10318840
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttc 10318840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 19101961 - 19102011
Alignment:
Q  304 aagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||| |||||| ||||||||| ||||| |||| |||||||||||||    
T  19101961 aagttgttactaggttaagtcacgacgaggtcactctgtttaagacgtttc 19102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 40408190 - 40408231
Alignment:
Q  312 attaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||| |||||| ||||||||||| |||||||||||||||||    
T  40408190 attagtttgagttacgaccaggtcactctctttaagacgttt 40408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 3998155 - 3998123
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaaga 348  Q
    ||||||||||||||||||||||| |||||||||    
T  3998155 ggttgagtcacgaccaggtcgctttctttaaga 3998123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 10388544 - 10388427
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| |  |   |||  | ||| |||||||||||||| ||||||||||||||||||    
T  10388544 ttgtttttagattttcaagctgttgtatttggatttccaaattctattttgaaa--aag--aatatctaccgaagttgttactaggttgagtcacgacca 10388449  T
Q  332 ggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||    
T  10388448 ggtcgctctctttaagacgttt 10388427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 4930205 - 4930267
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4930205 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 4930267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 8268221 - 8268281
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  8268221 ttgtttttggatttccaaactgttgtatttgcatttccaaattctattatctaccgaagtt 8268281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 3357748 - 3357693
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3357748 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 3357693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 9651083 - 9651028
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9651083 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 9651028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 26341171 - 26341233
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  26341171 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttc 26341233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 4930164 - 4930221
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4930164 tttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 4930221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 13314407 - 13314297
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacg 327  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||                ||||| |||||||| ||||||||||||||    
T  13314407 attattgtttttgggtttccaaactgttgtatttggatttccaaattctactatc----------------taccgtagttgttactaggttgagtcacg 13314324  T
Q  328 accaggtcgctctctttaagacgtttc 354  Q
    ||||| |||||||||||||||||||||    
T  13314323 accagatcgctctctttaagacgtttc 13314297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 44423305 - 44423244
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggattt-ccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  44423305 ttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagtt 44423244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 4579490 - 4579542
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4579490 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 4579542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 26341136 - 26341187
Alignment:
Q  241 gattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26341136 gattttcaaactgttgtatttggatttccaaaatctattatctaccgaagtt 26341187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 42627321 - 42627258
Alignment:
Q  292 tattatttaccgaagttgtta-ttaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  42627321 tattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaagacgtttc 42627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 42627364 - 42627305
Alignment:
Q  233 tgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtatttgaatttccaaattctattatctaccgaagtt 42627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 8076022 - 8076084
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  8076022 tattatctactgaagttgttactgggttgagtcacgaccaggtcgctctctttaagacgtttc 8076084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 27238225 - 27238275
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27238225 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttt 27238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 44510800 - 44510739
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  44510800 tattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttt 44510739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 26287337 - 26287220
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| |      ||  || | | |||||||||||||| ||||||||||||||||||    
T  26287337 ttgtttttggatttcaaaactgttgtatttggatttccaaattctatttt----gaaaaataatctctaccgaagttgttactaggttgagtcacgacca 26287242  T
Q  332 ggtcgctctctttaagacgttt 353  Q
     | |||| ||||||||| ||||    
T  26287241 tgccgctttctttaagatgttt 26287220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30256782 - 30256842
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||||    
T  30256782 ttgtttttggatttataaactattgtatttggatttgcaaattctattatctaccgaagtt 30256842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 23247049 - 23246994
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  23247049 taccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttc 23246994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 29150913 - 29150968
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  29150913 taccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttc 29150968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 354
Target Start/End: Original strand, 16372381 - 16372432
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttc 16372432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 25543482 - 25543423
Alignment:
Q  295 tatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||||||||| ||||||||||||| | |||||||| ||||||||||||||||    
T  25543482 tatttatcgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttc 25543423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 8075977 - 8076031
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctac 285  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  8075977 ttgtttttggatttccaaactgttgtattttggttttccaaattctattatctac 8076031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 9008142 - 9008196
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  9008142 taccaaagttgttactaggttgagtcacgaccatgtccctctctttaagacgttt 9008196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 44423248 - 44423198
Alignment:
Q  304 aagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  44423248 aagttgttactaggttgagtcacgatcagatcgctctctttaagacgtttc 44423198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 23866065 - 23866102
Alignment:
Q  317 gttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttc 23866102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 24528351 - 24528388
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttt 24528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 8268291 - 8268326
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||||||||||||||||    
T  8268291 ttgagtcacgaccaggtcgctctctttaagacgttt 8268326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 12254061 - 12254112
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||| ||||    
T  12254061 cgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttt 12254112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 33238002 - 33238037
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttc 33238037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 47998975 - 47999010
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttc 47999010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 9973459 - 9973497
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttc 9973497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 3879924 - 3879981
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 289  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||| || ||||||    
T  3879924 ttgttcttggatttttaaattgttgtattttgatttccaaattctattttccaccgaa 3879981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 9651135 - 9651090
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattct 276  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  9651135 ttgtttttggattttcaaactgttgtattttggttttccaaattct 9651090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 33226416 - 33226449
Alignment:
Q  321 agtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttc 33226449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 43892858 - 43892894
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    |||||||||||||||||||| ||||||||||||||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttca 43892894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 44510824 - 44510784
Alignment:
Q  252 tgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  44510824 tgttgtttttgtatttccaaattctattatctaccgaagtt 44510784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 15642154 - 15642197
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||    
T  15642154 ttttggatttttaaactgctgtatttggattttcaaattctatt 15642197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 16539507 - 16539472
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttc 16539472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 16626155 - 16626190
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttc 16626190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 21081136 - 21081101
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttc 21081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 21671111 - 21671158
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    |||||||||||||| |||||  || |||||||||||||||||||||||    
T  21671111 ttgtttttggatttccaaacaattttatttggatttccaaattctatt 21671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 32212749 - 32212714
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttc 32212714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 33243179 - 33243214
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttc 33243214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 42571945 - 42571980
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttc 42571980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 47177214 - 47177179
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttc 47177179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 47993800 - 47993835
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||| |||||||||||||||||||||||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttc 47993835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 21671178 - 21671228
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||| |||||||||||||||| ||| | |||||||||||| ||||    
T  21671178 gaagttgttactaggttgagtcacgactaggaccctctctttaagaagttt 21671228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 30256826 - 30256888
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||||| | |||||||| ||||    
T  30256826 tattatctaccgaagtttttacaaggttgagtcacgaccagatcgctgtttttaagacatttc 30256888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 27256239 - 27256272
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  27256239 ggttgagtcacgaccaggtcgctttctttaagac 27256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 273
Target Start/End: Complemental strand, 6591123 - 6591083
Alignment:
Q  234 gtttttggattttcaaactgttgta-tttggatttccaaat 273  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  6591123 gtttttggattttcaaattgttgtattttggatttccaaat 6591083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 23866023 - 23866067
Alignment:
Q  249 aactgttgtattt-ggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||    
T  23866023 aactgttgtattttggttttccaaattctattatttaccgaagtt 23866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 232 - 356
Target Start/End: Original strand, 3672512 - 3672620
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  3672512 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 3672595  T
Q  332 ggtcgctctctttaagacgtttcat 356  Q
    |||||||||||||||||||||||||    
T  3672596 ggtcgctctctttaagacgtttcat 3672620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 232 - 356
Target Start/End: Original strand, 3692544 - 3692652
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  3692544 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 3692627  T
Q  332 ggtcgctctctttaagacgtttcat 356  Q
    |||||||||||||||||||||||||    
T  3692628 ggtcgctctctttaagacgtttcat 3692652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 7571385 - 7571279
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  7571385 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 7571302  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  7571301 ggtcgctctctttaagacgtttc 7571279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 23666295 - 23666184
Alignment:
Q  227 gattattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcac 326  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||                |||| |||||||||||||    
T  23666295 gattgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt----------------gttactaggttgagtcac 23666212  T
Q  327 gaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||    
T  23666211 gaccaggtcgctctctttaagacgtttc 23666184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 24038543 - 24038432
Alignment:
Q  227 gattattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcac 326  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||                |||| |||||||||||||    
T  24038543 gattgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt----------------gttactaggttgagtcac 24038460  T
Q  327 gaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||    
T  24038459 gaccaggtcgctctctttaagacgtttc 24038432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 39775895 - 39775789
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                ||||| || ||||||||||||||||||    
T  39775895 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgctactaggttgagtcacgacca 39775812  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  39775811 ggtcgctctctttaagacgtttc 39775789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 3033614 - 3033678
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3033614 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcat 3033678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 8069605 - 8069712
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||               ||| |||||||||||||| ||||||||||||||||||    
T  8069605 ttgtttttggatttccaaacagttgtatttggatttccaaattctatt---------------tatctaccgaagttgttactaggttgagtcacgacca 8069689  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  8069690 ggtcgctctctttaagacgtttc 8069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 29350166 - 29350226
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29350166 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 29350226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 29715568 - 29715636
Alignment:
Q  230 tattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  29715568 tattgtttttggatttccaaactgttgtatttagatttccaaattctattatctaccgaagttgttatt 29715636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 354
Target Start/End: Complemental strand, 758532 - 758429
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggt 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||| |    
T  758532 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgaccagat 758449  T
Q  335 cgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||    
T  758448 cgctctctttaagacgtttc 758429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 18467195 - 18467257
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18467195 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 18467257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 8887900 - 8887961
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8887900 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttt 8887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 23661617 - 23661557
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23661617 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 23661557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 49971548 - 49971485
Alignment:
Q  291 ttattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  49971548 ttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctctttaagacgtttc 49971485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 3418965 - 3419027
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  3418965 tattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctctttaagacgtttc 3419027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 8883140 - 8883202
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  8883140 tattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctctttaagacgtttc 8883202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 14438818 - 14438756
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14438818 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctctttaagacgtttc 14438756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 27708848 - 27708910
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  27708848 tattatataccgaagttgttactaggttgagtcacgaccaggtcgttctctttaagacgtttc 27708910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 3033573 - 3033630
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtatttggatttccaaattctattatctaccgaagtt 3033630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 3418920 - 3418981
Alignment:
Q  232 ttgtttttgg-attttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3418920 ttgtttttggtatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 3418981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 20519980 - 20520086
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||                || ||||||||||| ||||||||||||||||||    
T  20519980 ttgttttcgaattttcaaactgttgtatttggatttccaaattctattatc----------------tagcgaagttgttactaggttgagtcacgacca 20520063  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||| ||||||||||||||||||    
T  20520064 ggtcactctctttaagacgtttc 20520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 3657407 - 3657347
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3657407 ttgtgtttggattttcaaactgttgtatttgaatttctaaattctattatctaccgaagtt 3657347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 8883100 - 8883156
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8883100 ttttggatttccaaactgttgtatttggattttcaaattctattatctaccgaagtt 8883156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 8887860 - 8887916
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  8887860 ttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagtt 8887916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 12112820 - 12112702
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||| ||||| ||||| ||||||||||||||| ||||||||||| |  |   |||  || || |||||||||||||| |||||||| ||||||| |    
T  12112820 ttgttttttgatttacaaaccgttgtatttggattttcaaattctattttaaa---aaggaat-atctaccgaagttgttactaggttgaatcacgacta 12112725  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  12112724 ggtcgctctctttaagacgtttc 12112702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 12966044 - 12965980
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  12966044 attattgtttttgaattttcaaaccgttgtatttgggtttccaaattctatgatctaccgaagtt 12965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 14438862 - 14438802
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  14438862 ttgtttttggattcccaaactgttgtatttggatttccaagttctattatctaccgaagtt 14438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 354
Target Start/End: Original strand, 55431242 - 55431347
Alignment:
Q  233 tgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccag 332  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||                |||||||||||||||||||||| |||    
T  55431242 tgtttttggatttccaaacagttgtatttggatttccaaattctattatctgctgaag----------------ttgttattaggttgagtcacgatcag 55431325  T
Q  333 gtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||    
T  55431326 gtcgctctctttaagacgtttc 55431347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 29715621 - 29715676
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  29715621 taccgaagttgttattaggttgagtcacgaccagatcgctctttttaagacgtttc 29715676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 18471978 - 18472031
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctcttta 345  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  18471978 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18472031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 18467151 - 18467211
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18467151 ttgtttttgaatttccaaactgatgtatttggattttcaaattctattatctaccgaagtt 18467211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 18471934 - 18471994
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  18471934 ttgtttttgaatttctaaactgatgtatttggatttccaaattctattatctaccgaagtt 18471994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 29350217 - 29350272
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  29350217 taccgaagttgttactaggttgagtcacgaccatgtcgctttctttaagacgtttc 29350272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 12965989 - 12965935
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  12965989 taccgaagttgttactagattgagtcacaaccaggtcgctctctttaagacgttt 12965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 2207830 - 2207769
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||| ||||||||| | ||| ||||||||||||||||||||||| ||||||||||||    
T  2207830 tattatttatcgaagttgtcactagattgagtcacgaccaggtcgctctttttaagacgttt 2207769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 12971746 - 12971694
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  12971746 cgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttc 12971694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 3657363 - 3657301
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| || ||||||||||||  || |||||||||||||||||||||    
T  3657363 tattatctaccgaagttgttactatgttgagtcacgattagatcgctctctttaagacgtttc 3657301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 33089441 - 33089403
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttc 33089403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 27708808 - 27708853
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattat 281  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  27708808 tttttgatttccaaactgttgtatttggatttccaaattctattat 27708853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 2207874 - 2207814
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||| ||||||||||||||| ||||  |||||||||||| || |||||||    
T  2207874 ttgtttttggatttttaaactgttgtatttgaatttttaaattctattatttatcgaagtt 2207814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 25726890 - 25726854
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||    
T  25726890 ttgagtcacgaccaggtcgctctctttaagacgtttc 25726854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 32474825 - 32474785
Alignment:
Q  252 tgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  32474825 tgttgtttttggatttccaaattctattatctaccgaagtt 32474785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 15763125 - 15763090
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttc 15763090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 15768286 - 15768251
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  15768286 tgagtcacgaccaggtcgctctctttaagacgtttc 15768251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 16013650 - 16013693
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  16013650 ttttggatttccaaactgttgtatttggatttccaaagtctatt 16013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 20090757 - 20090722
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttc 20090722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 20095882 - 20095847
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttc 20095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 32474801 - 32474741
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||| ||||| ||||||||||||||||||  |||||||||||    
T  32474801 tattatctaccgaagttgttactagattgagccacgaccaggtcgctctc--taagacgtttc 32474741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 49971591 - 49971552
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaa 271  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  49971591 ttgtttttggatttccaaactgttgtatttggatttccaa 49971552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 17026284 - 17026167
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccga-agttattatttaccgaagttgttattaggttgagtcacgacc 330  Q
    ||||||| ||||||| ||||||||||||||||||| | |||||||||| |     || || || ||||||  ||| |||||| |||||| |||||||| |    
T  17026284 ttgttttaggatttttaaactgttgtatttggattcctaaattctatttt-----gatagataatatttattgaaattgttaataggttaagtcacgatc 17026190  T
Q  331 aggtcgctctctttaagacgttt 353  Q
    |  ||||||||||||||||||||    
T  17026189 aattcgctctctttaagacgttt 17026167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 20810369 - 20810407
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttc 20810407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 26962056 - 26962094
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  26962056 ggttgagtcacgaccagatcgctctctttaagacgtttc 26962094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 53119524 - 53119562
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttc 53119562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 3477041 - 3477006
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttc 3477006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 17364063 - 17364098
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttc 17364098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 17368719 - 17368754
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttc 17368754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 27605235 - 27605196
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  27605235 aggttgagtcacgaccaagtcgctctctttaagacatttc 27605196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 34129264 - 34129229
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttc 34129229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 53358239 - 53358278
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttca 53358278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 13022024 - 13022062
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttc 13022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 348
Target Start/End: Complemental strand, 21494399 - 21494369
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaaga 348  Q
    |||||||||||||||||||||||||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaaga 21494369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 10321444 - 10321477
Alignment:
Q  321 agtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||| |||||||||||||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttc 10321477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 10586281 - 10586248
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  10586281 ggttgagtcacgaccaggtcgctttctttaagac 10586248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 1688980 - 1688948
Alignment:
Q  321 agtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||||| ||||||||||||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttt 1688948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 7806651 - 7806611
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  7806651 aggttgagttgcgaccaggtcgctctctttaagacgattca 7806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 28125097 - 28125148
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| |||||| ||||||||||||||||||||| ||||| |||||||| ||||    
T  28125097 cgaaattgttactaggttgagtcacgaccaggttgctct-tttaagacatttc 28125148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 7032 - 7138
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  7032 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 7115  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  7116 ggtcgctctctttaagacgtttc 7138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 40130853 - 40130747
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  40130853 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 40130770  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  40130769 ggtcgctctctttaagacgtttc 40130747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 17025863 - 17025969
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  17025863 ttgtttttagattttcaaattgttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 17025946  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  17025947 ggtcgctctctttaagacgtttc 17025969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 17556355 - 17556461
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  17556355 ttgtttttagattttcaaattgttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 17556438  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  17556439 ggtcgctctctttaagacgtttc 17556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 4238479 - 4238374
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggt 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| |||||||||||||||||||||    
T  4238479 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgaccaggt 4238396  T
Q  335 cgctctctttaagacgtttcat 356  Q
    |||||||||||| |||||||||    
T  4238395 cgctctctttaacacgtttcat 4238374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 31450033 - 31449927
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||                |||| ||||||||||||||||||    
T  31450033 ttgtttttggatttccaaagtgttgtatttggatttccaaattctattatctatcgaagtt----------------gttactaggttgagtcacgacca 31449950  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  31449949 ggtcgctctctttaagacgtttc 31449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 33416475 - 33416581
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  33416475 ttgtttttggatttccaaactgttgtatttgaatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 33416558  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    ||||| |||||||||||||||||    
T  33416559 ggtcggtctctttaagacgtttc 33416581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 356
Target Start/End: Complemental strand, 4243218 - 4243113
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggt 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||                || ||||||||||| |||||||||||||||||||||    
T  4243218 tttttggatttccaaactgttgtatttggatttccaaattctattatc----------------tatcgaagttgttactaggttgagtcacgaccaggt 4243135  T
Q  335 cgctctctttaagacgtttcat 356  Q
    |||||||||||| |||||||||    
T  4243134 cgctctctttaacacgtttcat 4243113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 19915075 - 19915135
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  19915075 ttgtttttggatttacaaactgttgtatttgtatttccaaattctattatctaccgaagtt 19915135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 34118438 - 34118502
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34118438 tattatctactgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcat 34118502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 38182403 - 38182343
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38182403 ttgtttttgaattgtcaaactgttgtatttggatttccaaattctattatctaccgaagtt 38182343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 24090606 - 24090661
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24090606 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 24090661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 1807444 - 1807506
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1807444 tattatctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagacgtttc 1807506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 1911136 - 1911070
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  1911136 ttgtttttggatttccaaactgttgtatttggattttcaaattctattatctatcgaagttgttatt 1911070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 18876533 - 18876473
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  18876533 ttgtttttggatttccaaactgctgtatttggatttccaaattctattatataccgaagtt 18876473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 19166608 - 19166668
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  19166608 ttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttc 19166668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 44926044 - 44925984
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  44926044 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgtttc 44925984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 40126005 - 40125946
Alignment:
Q  295 tatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  40126005 tatttgccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttc 40125946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 18876489 - 18876428
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  18876489 tattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttc 18876428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 28559822 - 28559761
Alignment:
Q  231 attgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  28559822 attgtttttggatttccaaactgttgtatttggatttataaattatattatctaccgaagtt 28559761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 1807400 - 1807460
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||    
T  1807400 ttgtttttggattttcaaattgttgtatttgaattttccaattctattatctaccgaagtt 1807460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 1911082 - 1911030
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  1911082 cgaagttgttattaggttaagtcacgatcaggtcgctctctttaagacgtttc 1911030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 23548748 - 23548693
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  23548748 taccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttc 23548693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 28559777 - 28559715
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||| | |||||||||| |||||||||||    
T  28559777 tattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataagacgtttc 28559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 36683551 - 36683613
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  36683551 tattatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttc 36683613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 17953989 - 17953934
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||    
T  17953989 taccgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttc 17953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19430011 - 19430049
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttc 19430049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19435513 - 19435551
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttc 19435551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19566160 - 19566198
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttc 19566198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19571662 - 19571700
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttc 19571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 31030525 - 31030563
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttc 31030563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 43302878 - 43302832
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctat 278  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  43302878 ttgtttttggattttcaaactgttgtatatggatttccaagttctat 43302832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 34118394 - 34118447
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctac 285  Q
    |||||||||||||| ||||||  ||||||| |||||||||||||||||||||||    
T  34118394 ttgtttttggatttccaaactaatgtatttagatttccaaattctattatctac 34118447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 33616823 - 33616787
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttc 33616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 13584346 - 13584385
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  13584346 aggttgaatcacgaccaggtcgctctctttaagacgtttc 13584385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 32015700 - 32015735
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttc 32015735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 38182337 - 38182298
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  38182337 aggttgagtcacgaccaggtcgctctctttaaaacgtttc 38182298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 354
Target Start/End: Complemental strand, 43302831 - 43302780
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||| ||||| |||||| ||||| |||||||||||||||||    
T  43302831 gaagttgttattaggctgagttacgacccggtcgttctctttaagacgtttc 43302780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 352
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgtt 352  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 28565330 - 28565276
Alignment:
Q  238 ttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||| |||||| ||||| ||||| ||||||||| |||||||    
T  28565330 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagtt 28565276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 28572953 - 28572899
Alignment:
Q  238 ttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||| |||||| ||||| ||||| ||||||||| |||||||    
T  28572953 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagtt 28572899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 2965547 - 2965664
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||||| |  |  ||    | |||  ||| || |||||| |||| |||||||||||||    
T  2965547 ttgtttttggatttcgaaactgctgtatttgaatttccaaattctattttgaaaaga----aatatccaccaaatttgttactagg-tgagtcacgacca 2965641  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||| |||||||    
T  2965642 ggtcgctctctttaaaacgtttc 2965664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 15875781 - 15875729
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| ||  |||||| ||||||||||||||||||||| ||||||||    
T  15875781 cgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttc 15875729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 29220240 - 29220297
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||| ||||||||||||||||  |||  | |||||||||||||||    
T  29220240 ttatttaccgaagttgttagtaggttgagtcacgactgggt--cactctttaagacgttt 29220297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 24673445 - 24673386
Alignment:
Q  295 tatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||||||||| |||||||||| |||| ||| ||||||| ||||| |||||||    
T  24673445 tatttatcgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttc 24673386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 10933371 - 10933413
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctat 278  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  10933371 ttttggtttttcaaactgtagtatttggatttccaaaatctat 10933413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 30777078 - 30777123
Alignment:
Q  310 ttattaggttgagtcac-gaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  30777078 ttattaggttgagtcacagactaggtcactctctttaagacgtttc 30777123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 34818797 - 34818764
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  34818797 ggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 37771708 - 37771741
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  37771708 ggttgagtcacgaccaggtcgctttctttaagac 37771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 44926090 - 44926046
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattct 276  Q
    |||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  44926090 ttgttttttgatttccaaactgctgtatttggattttcaaattct 44926046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 1935160 - 1935054
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  1935160 ttgtttttgaattttcaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 1935077  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  1935076 ggtcgctctctttaagacgtttc 1935054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 19892633 - 19892527
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  19892633 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 19892550  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  19892549 ggtcgctctctttaagacgtttc 19892527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 9189970 - 9189864
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  9189970 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 9189887  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    ||| |||||||||||||||||||    
T  9189886 ggttgctctctttaagacgtttc 9189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 30650857 - 30650963
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  30650857 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 30650940  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    | |||||||||||||||||||||    
T  30650941 gatcgctctctttaagacgtttc 30650963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 25478468 - 25478358
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||| |           ||||| |||||||||||||| ||||||||||||| ||||    
T  25478468 ttgtttttggattttcaaactattgtatttggatttccaaattc-attct-----------attatctaccgaagttgttactaggttgagtcacaacca 25478381  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  25478380 ggtcgctctctttaagacgtttc 25478358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 31326711 - 31326775
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31326711 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcat 31326775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 9180847 - 9180785
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9180847 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 9180785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 10160847 - 10160785
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10160847 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 10160785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 236 - 354
Target Start/End: Original strand, 28603230 - 28603332
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggtc 335  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||||||    
T  28603230 ttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgaccaggtc 28603313  T
Q  336 gctctctttaagacgtttc 354  Q
    ||||||||||| |||||||    
T  28603314 gctctctttaaaacgtttc 28603332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 353
Target Start/End: Complemental strand, 19578589 - 19578476
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggtc 335  Q
    |||||||||| |||||| |||||||||||||| ||||||||| | |  |    ||  | ||| |||||||||||||||||||||||||||||||||| ||    
T  19578589 ttttggatttccaaactattgtatttggattttcaaattctactttgaa----agagaatatctaccgaagttgttattaggttgagtcacgaccagatc 19578494  T
Q  336 gctctctttaagacgttt 353  Q
    ||||||||||||||||||    
T  19578493 gctctctttaagacgttt 19578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30631507 - 30631567
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30631507 ttgtttttggatttccaaactgttgtatttggatttccaagttctattatctaccgaagtt 30631567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 42926927 - 42926868
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42926927 ttgtttttggattttcaaactgtt-tatttggatttccaaattctattatctaccgaagtt 42926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 25497448 - 25497386
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25497448 tattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 25497386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 30658235 - 30658297
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  30658235 tattatctaccgaagttgttactatgttgagtcacgaccaggtcgctctctttaagacgtttc 30658297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 12796897 - 12796958
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12796897 tattatctgccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttt 12796958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 18344359 - 18344465
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||                 ||||||||||||| ||| ||||||||||||||    
T  18344359 ttgtttttggatttccaaactgttgtatttggattttcaaattctattatc----------------aaccgaagttgttactagattgagtcacgacca 18344442  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  18344443 ggtcgctctctttaagacgtttc 18344465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 9180891 - 9180831
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9180891 ttgtttttgaatttccaaactgttgtatttggattttcaaattctattatctaccgaagtt 9180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 10160891 - 10160831
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10160891 ttgtttttggatttccaaactcttgtatttggatttctaaattctattatctaccgaagtt 10160831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 29677696 - 29677755
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29677696 ttgtttttggattt-caaactgttgtatttggatttccaaattctattatctagcgaagtt 29677755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 30658191 - 30658251
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  30658191 ttgtttttggatttccaaactgttgtatttgcatttccaagttctattatctaccgaagtt 30658251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 35601850 - 35601910
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  35601850 ttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagtt 35601910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 35639164 - 35639104
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  35639164 ttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagtt 35639104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 40847777 - 40847657
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattct-attatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacc 330  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||| | ||   |||  | ||  |||||||||||||| ||| |||||||||||||    
T  40847777 ttgtttttagattttcaaactgttgtatttggatttccaaattattattttttaaataag--aataactaccgaagttgttactagattgagtcacgacc 40847680  T
Q  331 aggtcgctctctttaagacgttt 353  Q
    | |||| ||||||||||||||||    
T  40847679 atgtcgttctctttaagacgttt 40847657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 35601894 - 35601956
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  35601894 tattatctaccgaagttgttactaggttgaatcacgaccaggtcgctctttttaagacgtttc 35601956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 31326667 - 31326727
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||    
T  31326667 ttgtttttggatttccaaaatgttgtaattgaatttccaaattctattatctaccgaagtt 31326727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 19094611 - 19094557
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  19094611 taccgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttt 19094557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 29677353 - 29677415
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| || ||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  29677353 tattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctctttaagacgtttc 29677415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 7737966 - 7737913
Alignment:
Q  300 accgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  7737966 accgaagttgttactaggttgagtcacgaccatgtcgctctctttaagaagttt 7737913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 20711360 - 20711456
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacc 330  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||| | |    |||  | ||| |||||||||||||| |||||||||||||||||    
T  20711360 ttgtttttggatttacaaactgttgtattttggttttccaaattctatttttt----aagaaaatatctaccgaagttgttactaggttgagtcacgacc 20711455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 29677749 - 29677796
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  29677749 cgaagttgttactaggttgagtcacgaccaggtcgctctcattaagac 29677796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 35639120 - 35639058
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| || ||||| |||||| ||||||||||| |||||||||||||    
T  35639120 tattatctaccgaagttgttactaagttgaatcacgatcaggtcgctctttttaagacgtttc 35639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 42926877 - 42926827
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  42926877 taccgaagttgttactaggttgagtcacgatcaggccgctctctttaagac 42926827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 29677313 - 29677369
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||||    
T  29677313 tttttggattt-caaactgttgtatttgaattttcaaattctattatctagcgaagtt 29677369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 7738014 - 7737958
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||  | |||||||||||||||||| |||||||||||||| |||||||||    
T  7738014 ttttggatttctatactgttgtatttggattttcaaattctattatccaccgaagtt 7737958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 15489881 - 15489821
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||  ||||||||| | |||| ||||||||||||||||||||||||    
T  15489881 ttgtttttggatttccaatatgttgtattagaattttcaaattctattatctaccgaagtt 15489821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 12796853 - 12796904
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatct 283  Q
    |||||||||||||| || ||||||||||||| |||| |||||||||||||||    
T  12796853 ttgtttttggatttccacactgttgtatttgaattttcaaattctattatct 12796904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 42723546 - 42723511
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttc 42723511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 42728715 - 42728680
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttc 42728680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 44096302 - 44096337
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttc 44096337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 44754691 - 44754656
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttc 44754656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 44759857 - 44759822
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttc 44759822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 42914639 - 42914677
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttc 42914677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 160035 - 160076
Alignment:
Q  314 taggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  160035 taggttgagacacgaccaggtcgctctctttaatacgtttca 160076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 15489837 - 15489796
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccagg 333  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  15489837 tattatctaccgaagttgttactaggttgagtcacgaccagg 15489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 39542900 - 39542937
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttca 39542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 5089277 - 5089313
Alignment:
Q  318 ttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttc 5089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 19538382 - 19538421
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttca 19538421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 30631558 - 30631605
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaa 346  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  30631558 taccgaagttgttactaggttgagtcacgattaggtcactctctttaa 30631605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 35404848 - 35404899
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    |||||||||||| | ||||||||  ||||||||||||||| |||||||||||    
T  35404848 attattgtttttagtttttcaaagagttgtatttggattttcaaattctatt 35404899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 40518567 - 40518532
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttc 40518532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 6297984 - 6297951
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagac 6297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 21523829 - 21523788
Alignment:
Q  305 agttgttattaggttgagtcacgaccaggtcgctctctttaa 346  Q
    |||||||| ||||||||||||||||||||| ||| |||||||    
T  21523829 agttgttaataggttgagtcacgaccaggttgctatctttaa 21523788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 25497496 - 25497456
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaa 272  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  25497496 ttgtttttggatttccaaactattgtatttagatttccaaa 25497456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 32079358 - 32079406
Alignment:
Q  300 accgaagttgttattaggttgagtcacgaccaggtcgctctctttaaga 348  Q
    ||||||||| ||||| || |||||||||| ||||| |||||||||||||    
T  32079358 accgaagttattattgggctgagtcacgatcaggttgctctctttaaga 32079406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 39542605 - 39542565
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||||||||| | ||| |||||||||||||||||||    
T  39542605 aggttgagtcacgactaagtcactctctttaagacgtttca 39542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 12688895 - 12688959
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12688895 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatccaccgaagtt 12688959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 11428014 - 11428077
Alignment:
Q  291 ttattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11428014 ttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgtttc 11428077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 356
Target Start/End: Original strand, 19674241 - 19674349
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||                ||||||||||||||||| ||||||||||||||||||    
T  19674241 ttgtttttggattttcaaactgttgtatttggattttcaaattctatt----------------atttaccgaagttgttactaggttgagtcacgacca 19674324  T
Q  332 ggtcgctctctttaagacgtttcat 356  Q
    |||| ||||||||||||||||||||    
T  19674325 ggtcactctctttaagacgtttcat 19674349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 6408027 - 6407967
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6408027 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 6407967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 17964696 - 17964637
Alignment:
Q  233 tgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17964696 tgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 17964637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 352
Target Start/End: Original strand, 8747710 - 8747814
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||      ||          |||||||||| ||||||||||||||||||    
T  8747710 ttgtttttggatttacaaactgttgtatttggatttccaaattctattatcta------tt----------gaagttgttactaggttgagtcacgacca 8747793  T
Q  332 ggtcgctctctttaagacgtt 352  Q
    |||||||||||||||||||||    
T  8747794 ggtcgctctctttaagacgtt 8747814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 11534845 - 11534739
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||                ||| |||||||||| |||||||||||| |||||    
T  11534845 ttgtttttggattttcaaactgttgtatttggatttcgaaattctattatc----------------tactgaagttgttactaggttgagtcaagacca 11534762  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  11534761 ggtcgctctctttaagacgtttc 11534739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 11560355 - 11560249
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||                ||| |||||||||| |||||||||||| |||||    
T  11560355 ttgtttttggattttcaaactgttgtatttggatttcgaaattctattatc----------------tactgaagttgttactaggttgagtcaagacca 11560272  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  11560271 ggtcgctctctttaagacgtttc 11560249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 11570872 - 11570810
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11570872 tattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttc 11570810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 12406530 - 12406414
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||||||||||||||||||||||||| ||| || | || | ||  |||     ||| |||||||||||||| ||| ||||||||||||||    
T  12406530 ttgtttttggattttcaaactgttgtatttggattttcaatttttttttt-taaagaa-----tatataccgaagttgttactagattgagtcacgacca 12406437  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||| ||||||||||    
T  12406436 ggtcgctctcttaaagacgtttc 12406414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 2700222 - 2700167
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  2700222 taccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttc 2700167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 11570906 - 11570856
Alignment:
Q  242 attttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11570906 attttcaaactgttgtatttggatttcgaaattctattatctaccgaagtt 11570856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 33687724 - 33687664
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  33687724 ttatctaccgaaattgttattaggttgagttaccaccaggtcgctctctttaagacgtttc 33687664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 6407976 - 6407921
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  6407976 taccgaagttgttactaggttgagtcacgatcaggtcgctctcttgaagacgtttc 6407921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 21308962 - 21309019
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||    
T  21308962 ttgtttttggattttcaaactgt---atttggatttccaaattctattatctatcgaagtt 21309019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 12688951 - 12689004
Alignment:
Q  300 accgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  12688951 accgaagttgttactaggttgagtcatgaccaggtcactctctttaagacgttt 12689004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 228 - 353
Target Start/End: Complemental strand, 29892443 - 29892323
Alignment:
Q  228 attattgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacg 327  Q
    ||||||| ||||||||||  ||||||||||||||||||||| ||||||  || | ||  |||     ||| || ||||||||||| ||||||||||||||    
T  29892443 attattggttttggatttataaactgttgtatttggatttctaaattcagttttttaaagaa-----tatctatcgaagttgttactaggttgagtcacg 29892349  T
Q  328 accaggtcgctctctttaagacgttt 353  Q
      ||||||||||||||||||| ||||    
T  29892348 gtcaggtcgctctctttaagaagttt 29892323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 12183105 - 12183061
Alignment:
Q  310 ttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  12183105 ttatcaggttgagtcacgaccaggtcgctctctttaagacgtttc 12183061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 21309003 - 21309067
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| || ||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||    
T  21309003 tattatctatcgaagttgttactaggttgagtcactaccatatcgctctctttaagacgtttcat 21309067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 13736798 - 13736739
Alignment:
Q  295 tatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||    
T  13736798 tatttaccgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttc 13736739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 19478145 - 19478183
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttc 19478183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 33687770 - 33687704
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||||||||||||| |||||||||||||||||||||  ||||| | |||||||||||| || |||||    
T  33687770 ttgtttttggatttccaaactgttgtatttggatttttaaattttgttatctaccgaaattgttatt 33687704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 2700274 - 2700213
Alignment:
Q  232 ttgtttttggattttcaaactgtt-gtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||||||||| ||| |||||||||||| ||||||||| ||||||||||||||    
T  2700274 ttgtttttgaattttcaaaccgttagtatttggattttcaaattctactatctaccgaagtt 2700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 2882874 - 2882821
Alignment:
Q  296 atttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||||||||||||    
T  2882874 atttactgaagttgttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 3901909 - 3901946
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttt 3901946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 5601077 - 5601033
Alignment:
Q  310 ttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  5601077 ttatcaggttgagtcacgaccaggtcgctttctttaagacgtttc 5601033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 11956800 - 11956760
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttcat 11956760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 20748395 - 20748343
Alignment:
Q  304 aagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    ||||||||| |||||||||||||||||||||||| |||||||| | |||||||    
T  20748395 aagttgttactaggttgagtcacgaccaggtcgccctctttaacatgtttcat 20748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 22698338 - 22698303
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttc 22698303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 354
Target Start/End: Complemental strand, 24589342 - 24589225
Alignment:
Q  235 tttttggattttcaaactgttgtattt-ggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccagg 333  Q
    |||||||||||| |||| ||||||||| || |||| |||||||||| ||||   |||  |  || || ||||||||||| || |||||||||||| |||     
T  24589342 tttttggattttaaaacggttgtattttggttttcgaaattctattttcta---aagagaacatctatcgaagttgttactaagttgagtcacgatcaga 24589246  T
Q  334 tcgctctctttaagacgtttc 354  Q
    ||||||||||||| |||||||    
T  24589245 tcgctctctttaaaacgtttc 24589225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 25316689 - 25316628
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| ||||||| |||||| ||| ||||||| ||||||||||||||  ||||||||||||    
T  25316689 tattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttt 25316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 26204183 - 26204122
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||| ||||||| |||||| ||| ||||||| ||||||||||||||  ||||||||||||    
T  26204183 tattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttt 26204122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 2760355 - 2760304
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||| |||||| ||| |||||||||||| ||||||||| ||||||    
T  2760355 cgaagttgttactaggttaagttacgaccaggtcgttctctttaaaacgttt 2760304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 21396699 - 21396734
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttc 21396734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 21401755 - 21401790
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttc 21401790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 22609487 - 22609530
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    |||||||||| | |||| ||||||||||||||||||||||||||    
T  22609487 ttttggatttccgaactattgtatttggatttccaaattctatt 22609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 24191478 - 24191443
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttc 24191443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 24192575 - 24192540
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttc 24192540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 31981560 - 31981595
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttc 31981595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 34142080 - 34142115
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttc 34142115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 34154696 - 34154731
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttc 34154731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 2863564 - 2863518
Alignment:
Q  303 gaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||||||| ||||||||||||| | || |||||||||||||||||    
T  2863564 gaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 13605190 - 13605152
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttc 13605152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 22609548 - 22609586
Alignment:
Q  294 ttatttaccgaagttgttattaggttgagtcacgaccag 332  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  22609548 ttatttatcgaagttgttattaggttaagtcacgaccag 22609586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtt 352  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 25316737 - 25316676
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaa----attctattatctaccgaa 289  Q
    ||||||||| |||| |||||| || |||||||||||||||    ||||||||||||||||||    
T  25316737 ttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaa 25316676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 26204231 - 26204170
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaa----attctattatctaccgaa 289  Q
    ||||||||| |||| |||||| || |||||||||||||||    ||||||||||||||||||    
T  26204231 ttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaa 26204170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 36937634 - 36937570
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36937634 tattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 36937570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 7451686 - 7451792
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  7451686 ttgtttttggattttcaaactgttgtatttgaattttcaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 7451769  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  7451770 ggtcgctctctttaagacgtttc 7451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 29168140 - 29168034
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||                |||| ||||||||||||||||||    
T  29168140 ttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagtt----------------gttactaggttgagtcacgacca 29168057  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  29168056 ggtcgctctctttaagacgtttc 29168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 36423565 - 36423671
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||                |||||||||||||| ||||||||||| ||||||    
T  36423565 ttgtttttggattttcaaactgttgtatttggatttccaaaatctattatc----------------taccgaagttgttactaggttgagtcgcgacca 36423648  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  36423649 ggtcgctctctttaagacgtttc 36423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 37652997 - 37652891
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||| ||    
T  37652997 ttgtttttggatttccaaattgttgtatttggatttccaaattctattatctaccgaagtt----------------gttattaggttgagtcacgatca 37652914  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  37652913 ggtcgctctctttaagacgtttc 37652891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 39518338 - 39518444
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                || ||||||||||| ||||||||||||||||||    
T  39518338 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------tatcgaagttgttactaggttgagtcacgacca 39518421  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  39518422 ggtcgctctctttaagacgtttc 39518444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 42001362 - 42001468
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  42001362 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 42001445  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  42001446 ggtcgctctctttaagacgtttc 42001468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 556623 - 556728
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  556623 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 556706  T
Q  332 ggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||    
T  556707 ggtcgctctctttaagacgttt 556728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 561395 - 561500
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  561395 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 561478  T
Q  332 ggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||    
T  561479 ggtcgctctctttaagacgttt 561500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 36942388 - 36942324
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcat 356  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36942388 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcat 36942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 37550168 - 37550108
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37550168 ttgtttttggattttcaaattgttgtatttggatttccaaattctattatctaccgaagtt 37550108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 26667244 - 26667306
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26667244 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 26667306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 26938841 - 26938903
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26938841 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 26938903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 11981443 - 11981386
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11981443 tttttggattttcaaactgttgtagttggatttccaaattctattatctaccgaagtt 11981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 235 - 353
Target Start/End: Original strand, 36428640 - 36428742
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggt 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||                || ||||||||||| |||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taacgaagttgttactaggttgagtcacgaccaggt 36428723  T
Q  335 cgctctctttaagacgttt 353  Q
    |||||||||||||||||||    
T  36428724 cgctctctttaagacgttt 36428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 37248962 - 37248856
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||                |||||||| ||||||||||||||||||    
T  37248962 ttgtttttggatttccaaactgttatatttggatttccaaattctattatctaccga----------------agttgttactaggttgagtcacgacca 37248879  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||| ||||    
T  37248878 ggtcgctctctttaagacatttc 37248856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 41996593 - 41996699
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  41996593 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 41996676  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    ||| |||||||||||||||||||    
T  41996677 ggttgctctctttaagacgtttc 41996699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 232 - 353
Target Start/End: Complemental strand, 10759990 - 10759882
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |           ||||| |||||||||||||| ||||||||||||||||||    
T  10759990 ttgtttttggatttccaaactgttgtatttggatttccaaattc-attct-----------attatctaccgaagttgttactaggttgagtcacgacca 10759903  T
Q  332 ggtcgctctctttaagacgttt 353  Q
    ||||||||| ||||||||||||    
T  10759902 ggtcgctct-tttaagacgttt 10759882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 12045262 - 12045200
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12045262 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctctttaagacgtttc 12045200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 12102997 - 12103059
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12102997 tattatctaccgaagttgttactaggttgagttacgaccaggtcgctctctttaagacgtttc 12103059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 12502067 - 12501960
Alignment:
Q  232 ttgtttttggattttcaaactgtt-gtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacc 330  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||                ||| |||||||||| |||||||||||| ||||    
T  12502067 ttgtttttggattttcaaactgttcgtatttggatttccaaattctattatc----------------tactgaagttgttactaggttgagtcatgacc 12501984  T
Q  331 aggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||    
T  12501983 aggtcgctctctttaagacgtttc 12501960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 39523021 - 39523083
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39523021 tattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 39523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 12102952 - 12103013
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggattt-ccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  12102952 ttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagtt 12103013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 6155542 - 6155480
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  6155542 tattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctctttaagacgtttc 6155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 20181186 - 20181124
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20181186 tattatctactgaaattgttattaggttgagtcacgaccaggtcactctctttaagacgtttc 20181124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 41587283 - 41587221
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  41587283 tattatctaccgaagttgttactagtttgagtcacgaccaggttgctctctttaagacgtttc 41587221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 6155582 - 6155529
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 289  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  6155582 ttttggttttccaaactgttgtatttggatttccaaattctattatctaccgaa 6155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 12045307 - 12045246
Alignment:
Q  232 ttgtttttggattttcaaactgttgtattt-ggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  12045307 ttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagtt 12045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 6514764 - 6514708
Alignment:
Q  236 ttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6514764 tttttgattttaaaactgttgtatttggatttccaaattctattatctaccaaagtt 6514708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 26667200 - 26667260
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  26667200 ttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagtt 26667260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 26938797 - 26938857
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  26938797 ttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagtt 26938857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 35680045 - 35679936
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||           |||||| |||||||| ||||| |||||||||||| |  ||    
T  35680045 ttgtttttggattttcaaattgttgtatttggatttccaaattc-atta-----------tattatctaccgaagctgttactaggttgagtcatg-gca 35679959  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  35679958 ggtcgctctctttaagacgtttc 35679936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 41587327 - 41587267
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||    
T  41587327 ttgtttttggatttctaaactgttgtatttgaattttcaaattctattatctaccgaagtt 41587267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 3665911 - 3665966
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  3665911 taccgaagttgttactaggttgagtcacgactaggtcgctctcttcaagacgtttc 3665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 6514724 - 6514662
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  6514724 tattatctaccaaagttgttactaggttgagtcacgaccaagtcactctctttaagacgtttc 6514662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 12102947 - 12102897
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  12102947 taccgaagttgttactaggttgagtcacgactaggtcgctctctttaagac 12102897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 40147867 - 40147929
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| || |||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  40147867 tattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtttc 40147929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 39522976 - 39523029
Alignment:
Q  232 ttgtttttggattttcaaactgtt-gtatttggatttccaaattctattatcta 284  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  39522976 ttgtttttggatttccaaactgttagtatttggatttccaaattctattatcta 39523029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 40147828 - 40147889
Alignment:
Q  237 tttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  40147828 tttgaatttccaaactattgtatttggatttccaaattctattatctatcgaagttgttatt 40147889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 14374132 - 14374170
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttc 14374170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 20181231 - 20181177
Alignment:
Q  232 ttgtttttggattttc-aaactgttgtatttggatttccaaattctattatctac 285  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  20181231 ttgtttttggattttttaaaccgttgtatttggatttccaaattctattatctac 20181177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 3665859 - 3665920
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  3665859 ttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagtt 3665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 32461647 - 32461611
Alignment:
Q  317 gttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  32461647 gttgagtcacgaccaggtcgctctctttaagacgttt 32461611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 36937658 - 36937618
Alignment:
Q  252 tgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  36937658 tgttgtttttggatttccaaattctattatctaccgaagtt 36937618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 36942412 - 36942372
Alignment:
Q  252 tgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  36942412 tgttgtttttggatttccaaattctattatctaccgaagtt 36942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 12042055 - 12041993
Alignment:
Q  294 ttatttaccgaagttgttattaggt--tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| ||| |||||||||| |||||  |||||||||||||||||| |||||||||||||||||    
T  12042055 ttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctctttaagacgtttc 12041993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 13582785 - 13582750
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttc 13582750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 24435964 - 24435929
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttc 24435929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 32461702 - 32461648
Alignment:
Q  234 gtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagt 291  Q
    |||||||||||| ||||   ||||||||||||||| ||||||||||||||||||||||    
T  32461702 gtttttggatttccaaa---ttgtatttggatttctaaattctattatctaccgaagt 32461648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 7805068 - 7805106
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttc 7805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 12042099 - 12042041
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||  ||||||||||| |||||| | |||||||| ||||||    
T  12042099 ttgtttttggattttcaaactgt--tatttggattttcaaattatgttatctactgaagtt 12042041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 17510058 - 17510093
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttc 17510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 26709102 - 26709137
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttc 26709137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 26978836 - 26978871
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttc 26978871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 36253826 - 36253861
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttc 36253861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 41853548 - 41853583
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttc 41853583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 42019573 - 42019608
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttc 42019608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 13301585 - 13301551
Alignment:
Q  315 aggttgagtcacgaccaggtcgctctctttaagac 349  Q
    |||||||||||||||||||||||| ||||||||||    
T  13301585 aggttgagtcacgaccaggtcgctttctttaagac 13301551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 12104250 - 12104205
Alignment:
Q  231 attgtttttggattttcaaactgttgtatttggatttccaaattct 276  Q
    |||||||||| |||| ||||| ||||||||||||||| ||||||||    
T  12104250 attgtttttgtatttccaaacagttgtatttggattttcaaattct 12104205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 31731540 - 31731573
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  31731540 ggttgagtcacgaccaggtcgctttctttaagac 31731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 13291491 - 13291447
Alignment:
Q  237 tttggattttcaaactgttgtatttggatttccaaattctattat 281  Q
    |||||||||| ||| ||||||||||||||||| ||| ||||||||    
T  13291491 tttggatttttaaattgttgtatttggatttcgaaagtctattat 13291447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 41858593 - 41858629
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  41858593 tgagtcacgatcaggtcgctttctttaagacgtttca 41858629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 356
Target Start/End: Original strand, 3094045 - 3094150
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgaccaggt 334  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||                |||||||||| |||||||||||||||||||||    
T  3094045 tttttggatttccaaactgttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgaccaggt 3094128  T
Q  335 cgctctctttaagacgtttcat 356  Q
    ||||||||||||||||||||||    
T  3094129 cgctctctttaagacgtttcat 3094150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 23192984 - 23192878
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||                |||| ||||||||||||||||||    
T  23192984 ttgtttttggattttcaaactgttgtgtttggttttccaaattctattatctaccgaagtt----------------gttactaggttgagtcacgacca 23192901  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  23192900 ggtcgctctctttaagacgtttc 23192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 25855099 - 25855205
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||                |||||||||| ||||||||||||||||||    
T  25855099 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctacc----------------gaagttgttactaggttgagtcacgacca 25855182  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  25855183 ggtcgctctctttaagacgtttc 25855205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 47455553 - 47455447
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||                |||||||||||||||||||||||    
T  47455553 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagtt----------------gttattaggttgagtcacgacca 47455470  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  47455469 ggtcgctctctttaagacgtttc 47455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 16649779 - 16649719
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16649779 ttgtttttggattttcaaactgttgtatttgaatttccaaattctattatctaccgaagtt 16649719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 38620624 - 38620687
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatt 298  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38620624 tttttgaattttcaaactgttgtatttggatttccaaattttattatctaccgaagttattatt 38620687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 10135428 - 10135490
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10135428 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 10135490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 19799180 - 19799120
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19799180 ttgtttttggattttcaaactgttgtatttggattttcaaattctattatctatcgaagtt 19799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 25843740 - 25843800
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25843740 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagtt 25843800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 26927889 - 26927829
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26927889 ttgtttttggattttcaaactgttgtatttggatttttaaattctattatctaccgaagtt 26927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 51041628 - 51041568
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  51041628 ttgtttttggatttccaaactgatgtatttggatttccaaattctattatctaccgaagtt 51041568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 232 - 356
Target Start/End: Complemental strand, 47451392 - 47451284
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||                ||| ||||||||||||||||||    
T  47451392 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaaatta----------------ttactaggttgagtcacgacca 47451309  T
Q  332 ggtcgctctctttaagacgtttcat 356  Q
    |||||||||||||||||||||||||    
T  47451308 ggtcgctctctttaagacgtttcat 47451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 40165952 - 40166014
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  40165952 tattatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttc 40166014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 40165908 - 40165968
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  40165908 ttgtttttagattttcaaactgttgtatttggattaccatattctattatctaccgaagtt 40165968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 16035530 - 16035642
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||          || | | ||| |||| ||||||||| ||||||||||||||||||    
T  16035530 ttgtttttggatttccaaactgttgtatttggattttcaaattcta----------aaatgaatatctaccaaagttgttactaggttgagtcacgacca 16035619  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||| |||||||    
T  16035620 ggtcgccctctttaacacgtttc 16035642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 10140061 - 10140123
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  10140061 tattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttc 10140123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 33301347 - 33301295
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatcta 284  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33301347 ttgtttttggatttccaatctgttgtatttggatttccaaattctattatcta 33301295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 26927838 - 26927783
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  26927838 taccgaagttgttactaggttgagtcacgactaagtcgctctctttaagacgtttc 26927783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 16832029 - 16832082
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctac 285  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  16832029 ttgtatttggatttccaaaccgttgtatttggatttccaaattctattatctac 16832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 10135384 - 10135444
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||| ||||||  ||||||||||||||||| ||||||||||||||||||||    
T  10135384 ttgtttttgtatttccaaactcctgtatttggatttccaagttctattatctaccgaagtt 10135444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 11806341 - 11806393
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  11806341 cgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttc 11806393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 19799126 - 19799074
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  19799126 cgaagttgttactaggttgagtcacgatcagatcgctctctttaagacgtttc 19799074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 46696598 - 46696645
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  46696598 ttgtttttggattttcaaactgttttatttagatttccaaattctatt 46696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 8900233 - 8900287
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||    
T  8900233 taccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttt 8900287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 10106100 - 10106138
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttc 10106138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 38734272 - 38734310
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttc 38734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 39588482 - 39588428
Alignment:
Q  300 accgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||| |||||| |||||| |||||||| |||||||||||||||||||||||||    
T  39588482 accgaaattgttactaggttaagtcacgatcaggtcgctctctttaagacgtttc 39588428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 12259913 - 12260030
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||| |  |    |  || ||| ||| |||||||||| | ||||||| ||||||||    
T  12259913 ttgtttttggatttccacactgttatatttggatttccaa-ttctattttgaa----aaataatatctactgaagttgttacttggttgagacacgacca 12260007  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
     ||||||||||||||||||||||    
T  12260008 tgtcgctctctttaagacgtttc 12260030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 13890810 - 13890847
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttt 13890847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 39588534 - 39588477
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 289  Q
    |||||||||||||| ||||  |||||||||||||||||||||| ||||||| ||||||    
T  39588534 ttgtttttggatttccaaatagttgtatttggatttccaaattatattatccaccgaa 39588477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 16649710 - 16649674
Alignment:
Q  317 gttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||||||||||||||||||||||||    
T  16649710 gttgagtcacgaccaggtcgctctctttaagacgttt 16649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 16832085 - 16832133
Alignment:
Q  304 aagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtt 352  Q
    ||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  16832085 aagttgttactatattgagtcacgaccaggtcgctctctttaagacgtt 16832133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 18784719 - 18784655
Alignment:
Q  229 ttattgtttttggattttcaaactgttgtat-ttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||||| ||||||||||||| |||| |||| |||||||||| |||| |||||||    
T  18784719 ttattgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagtt 18784655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 355
Target Start/End: Complemental strand, 8267929 - 8267890
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttca 355  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttca 8267890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 28434752 - 28434705
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctatt 279  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  28434752 ttgtttttggattttcaaactattgtatttgaattttcaaattctatt 28434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 36684810 - 36684775
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttc 36684775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 5602523 - 5602485
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttc 5602485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 8900164 - 8900206
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaatt 274  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  8900164 ttgtttttggattttcaaactgttgcatttgaatttccaaatt 8900206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 33301291 - 33301241
Alignment:
Q  304 aagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||| ||| |||| |||||||||||||| |||||||||||||||||    
T  33301291 aagttgttactagcttgaatcacgaccaggtcgttctctttaagacgtttc 33301241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 39747263 - 39747225
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttc 39747225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 18784661 - 18784610
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||    
T  18784661 cgaagttgttactaggttgagtcacgatcaggtcgctct-tttaagacatttc 18784610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 38620683 - 38620727
Alignment:
Q  310 ttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||    
T  38620683 ttattaggttgagtcgcgaccagatcactctctttaagacgtttc 38620727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 3584601 - 3584636
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttc 3584636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 4633027 - 4632988
Alignment:
Q  314 taggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  4633027 taggttgagtcacgactatgtcgctctctttaagacgttt 4632988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 5724979 - 5725014
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttc 5725014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 5730105 - 5730140
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttc 5730140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 11251208 - 11251173
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttc 11251173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 11806270 - 11806309
Alignment:
Q  231 attgtttttggattttcaaactgttgtatttggatttcca 270  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  11806270 attgtttttggattttcaaattgttatatttggatttcca 11806309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 27716443 - 27716478
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttc 27716478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 34318319 - 34318284
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||| ||||||||||||||||||||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttc 34318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 37404511 - 37404476
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttc 37404476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 37409632 - 37409597
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttc 37409597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 19422976 - 19422938
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  19422976 ggttgagtcacgatcagatcgctctctttaagacgtttc 19422938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 26651264 - 26651227
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttt 26651227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 41098050 - 41098017
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  41098050 ggttgagtcacgaccaggtcgctttctttaagac 41098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 51041559 - 51041523
Alignment:
Q  317 gttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||| |||||||||||||    
T  51041559 gttgagtcacgaccaggtcgctct-tttaagacgtttc 51041523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 10140017 - 10140077
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||| |||  ||||||  ||||||||||||| |||  |||||||||||||||||||    
T  10140017 ttgtttttgtattcccaaactactgtatttggattttcaagatctattatctaccgaagtt 10140077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 10054 - 9948
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||                |||| ||||||||||||||||||    
T  10054 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagtt----------------gttactaggttgagtcacgacca 9971  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||    
T  9970 ggtcgctctctttaagacgtttc 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 4002 - 4108
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||                |||||||||||||| ||||||||||||||||||    
T  4002 ttgtttttggatttccaaactgttgtatttggatttccaaattctattatc----------------taccgaagttgttactaggttgagtcacgacca 4085  T
Q  332 ggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||| ||||    
T  4086 ggtcgctctctttaagacatttc 4108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 444099 - 444039
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    ||||||||||||||| ||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  444099 ttgtttttggatttttaaactcttgtatttgtattttcaaattctattatttaccgaagtt 444039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 444055 - 444018
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgac 329  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  444055 tattatttaccgaagttgttactaggttgaatcacgac 444018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 83045 - 83100
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  83045 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 83100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 25327 - 25387
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  25327 ttgtctttggattttcaaactgctgtatttggatttccaaattctattatctatcgaagtt 25387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 25381 - 25431
Alignment:
Q  302 cgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtt 352  Q
    ||||||||||| ||||||||||||| |  ||||| ||||||||||||||||    
T  25381 cgaagttgttactaggttgagtcacaattaggtcactctctttaagacgtt 25431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 35565 - 35622
Alignment:
Q  235 tttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagtt 292  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  35565 tttttgcattttcaaactgttgtatttggatttccaaattctattatttactgaagtt 35622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 35606 - 35668
Alignment:
Q  292 tattatttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||| |||||||||| |||||| ||| ||||||| | ||||||||||||||||||||    
T  35606 tattatttactgaagttgttactaggttaagttacgaccatgccgctctctttaagacgtttc 35668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 3906 - 4020
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacca 331  Q
    ||||||||||||||| ||| ||| ||||||| |||| ||||||||||| |  |   ||   | ||| |||||||||||||| ||||||||||||||||||    
T  3906 ttgtttttggattttaaaattgtcgtatttgaattttcaaattctatttttga---aaaagaatatctaccgaagttgttactaggttgagtcacgacca 4002  T
Q  332 ggtcgctctctttaagac 349  Q
      ||||||||||||||||    
T  4003 tatcgctctctttaagac 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 15199 - 15295
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctaccgaagttattatttaccgaagttgttattaggttgagtcacgacc 330  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||| | |    |||  | ||| |||||||||||||| |||||||||||||||||    
T  15199 ttgtttttggatttacaaactgttgtattttggttttccaaattctatttttt----aagaaaatatctaccgaagttgttactaggttgagtcacgacc 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 166202 - 166147
Alignment:
Q  299 taccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||    
T  166202 taccgaaattgatactaggttgagtcacaaccaggtcgctctctttaagacgtttc 166147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 166254 - 166196
Alignment:
Q  232 ttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctaccgaa 289  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||| || |||||||||    
T  166254 ttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaa 166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 34067 - 34029
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttc 34029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 2285 - 2342
Alignment:
Q  296 atttaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgttt 353  Q
    ||||| |||||||||||||||||||||||| || ||||||| ||||||||| ||||||    
T  2285 atttatcgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttt 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 3058 - 3093
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttc 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 81477 - 81442
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    ||||||||||||||||||||||||||||||||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttc 81442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 2870 - 2832
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttc 2832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 10830 - 10792
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttc 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 1562 - 1600
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttc 1600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 7043 - 7081
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttc 7081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 285 - 329
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattct 276  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||    
T  285 ttgtttttggatttccaaactgttgtatttagatttcgaaattct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 165210 - 165166
Alignment:
Q  232 ttgtttttggattttcaaactgttgtatttggatttccaaattct 276  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||    
T  165210 ttgtttttggatttccaaactgttgtatttagatttcgaaattct 165166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 9303 - 9268
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttc 9268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 3563 - 3598
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttc 3598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Complemental strand, 13835 - 13800
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttc 13800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 37010 - 37045
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  37010 tgagtcacgaccaggtcgctttctttaagacgtttc 37045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 31545 - 31580
Alignment:
Q  319 tgagtcacgaccaggtcgctctctttaagacgtttc 354  Q
    |||||||||||||||||||| |||||||||||||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttc 31580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 1324 - 1291
Alignment:
Q  316 ggttgagtcacgaccaggtcgctctctttaagac 349  Q
    ||||||||||||||||||||||| ||||||||||    
T  1324 ggttgagtcacgaccaggtcgctttctttaagac 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University