View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10148_low_22 (Length: 350)

Name: NF10148_low_22
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10148_low_22
NF10148_low_22
[»] chr4 (54 HSPs)
chr4 (1-332)||(51204509-51204840)
chr4 (116-260)||(20097393-20097537)
chr4 (114-261)||(33036106-33036252)
chr4 (114-260)||(2266760-2266902)
chr4 (114-187)||(1012367-1012440)
chr4 (213-261)||(35021197-35021245)
chr4 (138-261)||(2704513-2704630)
chr4 (114-261)||(28293137-28293284)
chr4 (141-260)||(9743590-9743705)
chr4 (213-261)||(32912742-32912790)
chr4 (213-261)||(34361653-34361701)
chr4 (213-260)||(27396618-27396665)
chr4 (214-261)||(38812260-38812307)
chr4 (213-261)||(3042612-3042660)
chr4 (213-261)||(4205117-4205165)
chr4 (213-261)||(4396327-4396375)
chr4 (213-261)||(4597994-4598042)
chr4 (213-261)||(9139248-9139296)
chr4 (217-261)||(28003152-28003196)
chr4 (213-261)||(30002786-30002834)
chr4 (213-261)||(37663901-37663949)
chr4 (213-261)||(39397919-39397967)
chr4 (213-261)||(46884196-46884244)
chr4 (117-185)||(51959922-51959990)
chr4 (214-261)||(38811814-38811861)
chr4 (213-260)||(47253751-47253798)
chr4 (214-261)||(55241267-55241314)
chr4 (214-260)||(36493851-36493897)
chr4 (212-261)||(47073655-47073704)
chr4 (213-261)||(7152268-7152316)
chr4 (213-261)||(7703518-7703566)
chr4 (213-261)||(17272012-17272060)
chr4 (213-261)||(19089615-19089663)
chr4 (139-187)||(22729782-22729830)
chr4 (139-187)||(22756860-22756908)
chr4 (213-261)||(25184114-25184162)
chr4 (213-261)||(29584360-29584408)
chr4 (217-261)||(35025754-35025798)
chr4 (217-261)||(38011855-38011899)
chr4 (1-41)||(47073591-47073631)
chr4 (213-261)||(55478057-55478105)
chr4 (213-260)||(17167715-17167762)
chr4 (213-260)||(17173292-17173339)
chr4 (213-260)||(34948259-34948306)
chr4 (215-262)||(37775669-37775716)
chr4 (213-260)||(52516599-52516646)
chr4 (217-259)||(5915802-5915844)
chr4 (114-261)||(54995703-54995846)
chr4 (213-261)||(49375967-49376016)
chr4 (213-261)||(25701219-25701267)
chr4 (215-259)||(42063006-42063050)
chr4 (215-259)||(47028103-47028147)
chr4 (217-261)||(50697243-50697287)
chr4 (213-261)||(53124288-53124336)
[»] chr2 (43 HSPs)
chr2 (1-261)||(22963401-22963661)
chr2 (1-261)||(22997816-22998076)
chr2 (114-260)||(41643874-41644016)
chr2 (118-261)||(6177776-6177915)
chr2 (142-258)||(18947530-18947642)
chr2 (114-261)||(34441827-34441968)
chr2 (114-256)||(30844850-30844991)
chr2 (114-272)||(42005379-42005530)
chr2 (118-261)||(19073358-19073498)
chr2 (137-248)||(18779328-18779435)
chr2 (114-187)||(15650919-15650992)
chr2 (213-261)||(4166923-4166971)
chr2 (213-261)||(13711465-13711513)
chr2 (213-261)||(18494422-18494470)
chr2 (213-261)||(19313853-19313901)
chr2 (213-261)||(41465510-41465558)
chr2 (114-250)||(27138925-27139056)
chr2 (216-261)||(35958910-35958955)
chr2 (213-261)||(4264231-4264279)
chr2 (213-261)||(4763629-4763677)
chr2 (213-261)||(26357578-26357626)
chr2 (213-261)||(41960884-41960932)
chr2 (213-260)||(33660522-33660569)
chr2 (114-261)||(43446362-43446509)
chr2 (214-260)||(36641988-36642034)
chr2 (216-261)||(5881535-5881580)
chr2 (213-261)||(11366535-11366583)
chr2 (213-261)||(17071891-17071939)
chr2 (213-261)||(19424782-19424830)
chr2 (213-261)||(33902069-33902117)
chr2 (213-261)||(37905710-37905757)
chr2 (217-261)||(39788580-39788624)
chr2 (214-261)||(17054251-17054298)
chr2 (214-261)||(19093414-19093461)
chr2 (214-261)||(29242293-29242340)
chr2 (214-261)||(31861896-31861943)
chr2 (214-260)||(3176941-3176987)
chr2 (140-189)||(58095-58144)
chr2 (213-261)||(2325524-2325572)
chr2 (213-261)||(31570888-31570936)
chr2 (213-261)||(33551140-33551188)
chr2 (130-166)||(38250058-38250094)
chr2 (213-261)||(44913663-44913710)
[»] chr6 (20 HSPs)
chr6 (114-261)||(19631750-19631893)
chr6 (114-261)||(11084058-11084199)
chr6 (213-261)||(8513234-8513282)
chr6 (213-260)||(30353493-30353540)
chr6 (217-262)||(20768086-20768131)
chr6 (213-261)||(3880074-3880122)
chr6 (213-261)||(4318958-4319006)
chr6 (213-261)||(5627392-5627440)
chr6 (114-182)||(34993907-34993975)
chr6 (213-260)||(6088910-6088957)
chr6 (214-260)||(6614036-6614082)
chr6 (211-261)||(24662187-24662237)
chr6 (217-259)||(25440961-25441003)
chr6 (213-261)||(7055350-7055398)
chr6 (214-261)||(26301923-26301970)
chr6 (213-261)||(1945834-1945883)
chr6 (214-262)||(3005393-3005441)
chr6 (148-204)||(4102864-4102920)
chr6 (217-261)||(7235173-7235217)
chr6 (213-261)||(18498434-18498482)
[»] chr3 (38 HSPs)
chr3 (118-261)||(40640542-40640681)
chr3 (114-261)||(19606818-19606961)
chr3 (114-261)||(49359532-49359675)
chr3 (140-261)||(45879428-45879545)
chr3 (4-95)||(42204620-42204711)
chr3 (114-261)||(42204343-42204489)
chr3 (114-261)||(7568623-7568766)
chr3 (114-259)||(4556543-4556689)
chr3 (118-259)||(38392536-38392673)
chr3 (140-261)||(47930597-47930713)
chr3 (213-260)||(46297898-46297945)
chr3 (114-261)||(53811880-53812023)
chr3 (213-261)||(35844318-35844366)
chr3 (213-262)||(29163838-29163887)
chr3 (114-187)||(44880862-44880934)
chr3 (213-261)||(4015452-4015500)
chr3 (213-261)||(21193598-21193646)
chr3 (213-261)||(26941396-26941444)
chr3 (114-261)||(32180655-32180794)
chr3 (213-261)||(37203059-37203107)
chr3 (213-261)||(51213117-51213165)
chr3 (213-261)||(55343420-55343468)
chr3 (118-236)||(43485333-43485451)
chr3 (213-262)||(11835742-11835791)
chr3 (213-261)||(3655338-3655386)
chr3 (114-162)||(7758327-7758375)
chr3 (217-261)||(22450960-22451004)
chr3 (213-261)||(37157700-37157748)
chr3 (213-261)||(40552395-40552443)
chr3 (213-261)||(48354933-48354981)
chr3 (214-261)||(11466816-11466863)
chr3 (213-252)||(29099356-29099395)
chr3 (114-161)||(47870289-47870335)
chr3 (214-261)||(52041060-52041107)
chr3 (217-259)||(5124671-5124713)
chr3 (214-260)||(53818509-53818555)
chr3 (224-261)||(39282645-39282682)
chr3 (213-261)||(44891499-44891546)
[»] chr5 (52 HSPs)
chr5 (114-261)||(22616495-22616637)
chr5 (114-262)||(21320751-21320895)
chr5 (118-262)||(10237414-10237554)
chr5 (114-236)||(25653607-25653728)
chr5 (114-261)||(36055778-36055921)
chr5 (1-95)||(21266306-21266399)
chr5 (114-187)||(31878454-31878527)
chr5 (213-261)||(7693231-7693279)
chr5 (213-262)||(31705737-31705786)
chr5 (213-261)||(8742013-8742061)
chr5 (114-260)||(33163515-33163659)
chr5 (214-261)||(12910351-12910398)
chr5 (4-101)||(10053503-10053603)
chr5 (114-187)||(10053294-10053367)
chr5 (213-262)||(32563149-32563198)
chr5 (114-260)||(41417483-41417625)
chr5 (213-261)||(9200234-9200282)
chr5 (213-261)||(19119860-19119908)
chr5 (213-261)||(26317810-26317858)
chr5 (213-261)||(36860424-36860472)
chr5 (213-261)||(36866763-36866811)
chr5 (213-261)||(40133386-40133434)
chr5 (214-261)||(5112440-5112487)
chr5 (213-260)||(25501052-25501099)
chr5 (215-262)||(35504167-35504214)
chr5 (213-269)||(7208989-7209046)
chr5 (114-259)||(13380498-13380643)
chr5 (213-261)||(1429271-1429319)
chr5 (213-261)||(5829898-5829946)
chr5 (213-261)||(8466746-8466794)
chr5 (213-261)||(13956471-13956519)
chr5 (217-261)||(14409456-14409500)
chr5 (213-261)||(15724491-15724539)
chr5 (213-261)||(22255182-22255230)
chr5 (217-261)||(25513772-25513816)
chr5 (213-261)||(27330307-27330355)
chr5 (213-261)||(35511603-35511651)
chr5 (213-261)||(38528362-38528410)
chr5 (214-261)||(22019633-22019680)
chr5 (214-261)||(35826610-35826657)
chr5 (214-261)||(39572820-39572867)
chr5 (43-101)||(12080911-12080969)
chr5 (114-187)||(12081171-12081245)
chr5 (227-261)||(17158173-17158207)
chr5 (139-261)||(26411294-26411416)
chr5 (114-176)||(27579110-27579172)
chr5 (213-261)||(16004502-16004551)
chr5 (213-262)||(22980793-22980842)
chr5 (213-253)||(5748437-5748477)
chr5 (213-269)||(5837548-5837604)
chr5 (213-261)||(22974208-22974256)
chr5 (213-261)||(23116348-23116396)
[»] chr7 (41 HSPs)
chr7 (114-254)||(22955216-22955352)
chr7 (133-261)||(4902341-4902465)
chr7 (117-261)||(8133466-8133608)
chr7 (114-246)||(37854200-37854326)
chr7 (118-261)||(23402279-23402418)
chr7 (114-248)||(7742933-7743063)
chr7 (213-261)||(17842723-17842771)
chr7 (213-261)||(37109848-37109896)
chr7 (213-268)||(24211710-24211765)
chr7 (214-261)||(4582895-4582942)
chr7 (213-260)||(8299192-8299239)
chr7 (114-260)||(19786282-19786428)
chr7 (114-187)||(49002297-49002368)
chr7 (213-262)||(38258520-38258569)
chr7 (217-261)||(241024-241068)
chr7 (213-261)||(5657618-5657666)
chr7 (213-261)||(6546495-6546543)
chr7 (213-261)||(12165728-12165776)
chr7 (213-261)||(18797305-18797353)
chr7 (213-261)||(26524464-26524512)
chr7 (213-261)||(27283720-27283768)
chr7 (213-261)||(32432433-32432481)
chr7 (213-261)||(32821190-32821238)
chr7 (140-260)||(4618685-4618801)
chr7 (213-260)||(23111167-23111214)
chr7 (214-260)||(3953733-3953779)
chr7 (214-271)||(31520861-31520918)
chr7 (217-262)||(48928704-48928749)
chr7 (213-261)||(8861261-8861309)
chr7 (213-261)||(31579206-31579254)
chr7 (213-261)||(43686017-43686065)
chr7 (222-261)||(10359360-10359399)
chr7 (213-260)||(25691682-25691729)
chr7 (214-261)||(37346998-37347045)
chr7 (214-261)||(40381941-40381988)
chr7 (213-259)||(10675331-10675377)
chr7 (227-261)||(30055502-30055536)
chr7 (213-261)||(12390767-12390815)
chr7 (213-261)||(15612895-15612943)
chr7 (213-261)||(21991612-21991660)
chr7 (215-259)||(34095888-34095932)
[»] chr1 (48 HSPs)
chr1 (118-261)||(13876827-13876966)
chr1 (1-95)||(17695675-17695769)
chr1 (114-261)||(16132476-16132619)
chr1 (118-246)||(16127536-16127660)
chr1 (114-261)||(27118331-27118474)
chr1 (118-199)||(10758208-10758289)
chr1 (213-261)||(18422648-18422696)
chr1 (114-187)||(31804988-31805061)
chr1 (213-261)||(1547284-1547332)
chr1 (213-261)||(2959745-2959793)
chr1 (214-261)||(10182140-10182187)
chr1 (213-270)||(37619027-37619084)
chr1 (217-261)||(4150490-4150534)
chr1 (213-261)||(15382930-15382978)
chr1 (213-261)||(16415642-16415690)
chr1 (213-261)||(19899900-19899948)
chr1 (213-261)||(30254855-30254903)
chr1 (213-261)||(38823211-38823259)
chr1 (213-260)||(15752027-15752074)
chr1 (213-260)||(28769651-28769698)
chr1 (161-256)||(34491456-34491551)
chr1 (214-261)||(43579243-43579290)
chr1 (215-261)||(42721036-42721082)
chr1 (213-261)||(3309145-3309193)
chr1 (213-261)||(8222128-8222176)
chr1 (213-261)||(21289662-21289710)
chr1 (213-261)||(22170751-22170799)
chr1 (213-261)||(23999344-23999392)
chr1 (1-41)||(26970335-26970375)
chr1 (213-261)||(27227608-27227656)
chr1 (213-261)||(30254421-30254469)
chr1 (213-261)||(30327083-30327131)
chr1 (213-261)||(32267031-32267079)
chr1 (213-261)||(34012508-34012556)
chr1 (213-261)||(48620634-48620682)
chr1 (213-252)||(37451292-37451331)
chr1 (139-209)||(28012115-28012185)
chr1 (213-274)||(11742481-11742542)
chr1 (217-262)||(14758037-14758082)
chr1 (118-187)||(15964171-15964240)
chr1 (114-236)||(25943224-25943342)
chr1 (212-261)||(26970262-26970311)
chr1 (214-259)||(42663785-42663830)
chr1 (213-261)||(7079205-7079253)
chr1 (217-261)||(31621688-31621732)
chr1 (215-259)||(45319610-45319654)
chr1 (217-261)||(47279160-47279204)
chr1 (213-261)||(47682624-47682672)
[»] chr8 (40 HSPs)
chr8 (114-261)||(4108818-4108959)
chr8 (213-261)||(1150247-1150295)
chr8 (213-261)||(15009242-15009290)
chr8 (213-261)||(34894967-34895015)
chr8 (114-260)||(35735884-35736030)
chr8 (1-46)||(41190953-41190998)
chr8 (213-261)||(13307623-13307671)
chr8 (213-261)||(16447017-16447065)
chr8 (213-261)||(27082980-27083028)
chr8 (213-261)||(36695108-36695156)
chr8 (213-261)||(41362518-41362566)
chr8 (213-260)||(465843-465890)
chr8 (214-261)||(6098661-6098708)
chr8 (217-260)||(6446709-6446752)
chr8 (214-261)||(28220955-28221002)
chr8 (214-256)||(23176763-23176805)
chr8 (213-261)||(1204927-1204975)
chr8 (213-261)||(10555344-10555392)
chr8 (213-261)||(12876109-12876157)
chr8 (114-186)||(18756571-18756642)
chr8 (213-261)||(34952173-34952221)
chr8 (213-261)||(40862419-40862467)
chr8 (213-261)||(43643737-43643785)
chr8 (213-260)||(7891090-7891137)
chr8 (222-261)||(7998363-7998402)
chr8 (213-256)||(37970661-37970704)
chr8 (214-261)||(38110354-38110401)
chr8 (114-199)||(3038465-3038550)
chr8 (214-259)||(5018013-5018058)
chr8 (214-255)||(8151412-8151453)
chr8 (114-187)||(34463487-34463560)
chr8 (224-261)||(39099262-39099299)
chr8 (213-261)||(4133150-4133198)
chr8 (213-261)||(5300088-5300136)
chr8 (213-261)||(16222863-16222911)
chr8 (213-261)||(23854573-23854621)
chr8 (213-261)||(30654725-30654773)
chr8 (217-261)||(33906224-33906268)
chr8 (213-261)||(38643978-38644026)
chr8 (213-253)||(41191018-41191058)
[»] scaffold0200 (1 HSPs)
scaffold0200 (118-261)||(24725-24864)
[»] scaffold0050 (1 HSPs)
scaffold0050 (113-204)||(5644-5735)
[»] scaffold0002 (2 HSPs)
scaffold0002 (213-261)||(135-183)
scaffold0002 (213-261)||(408705-408753)
[»] scaffold0318 (1 HSPs)
scaffold0318 (213-260)||(11908-11956)
[»] scaffold0262 (1 HSPs)
scaffold0262 (213-261)||(12137-12185)
[»] scaffold0009 (2 HSPs)
scaffold0009 (213-261)||(100822-100870)
scaffold0009 (213-261)||(42349-42397)
[»] scaffold0291 (1 HSPs)
scaffold0291 (213-260)||(7889-7936)
[»] scaffold0061 (1 HSPs)
scaffold0061 (213-260)||(43959-44006)
[»] scaffold0017 (1 HSPs)
scaffold0017 (213-260)||(154781-154828)
[»] scaffold0662 (1 HSPs)
scaffold0662 (215-259)||(6982-7026)


Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 51204840 - 51204509
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcaatat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51204840 atgtgaattttggagaagatgaattttgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcgatat 51204741  T
Q  101 ggnnnnnnngatgaaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaata 200  Q
    ||       ||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  51204740 ggaaaaaaagatgaaagatataatgacacaccttattagcaaatgtgcaatgcaccatataatctgatgtgacatggattaaatacacaaaagctcaata 51204641  T
Q  201 attaatcatgaagttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttttaatcaattgagtatctgtgcaaacaattgta 300  Q
    ||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51204640 attgatcatagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttttaatcgattgagtatctgtgcaaacaattgta 51204541  T
Q  301 aaggttaatatcttgagttaggtagtactaca 332  Q
    ||||||||||||||||||||||||||||||||    
T  51204540 aaggttaatatcttgagttaggtagtactaca 51204509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 260
Target Start/End: Original strand, 20097393 - 20097537
Alignment:
Q  116 agatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagtt 215  Q
    ||||||||||||| | ||||| | ||||| |||||||||| ||| ||||||| |||||||| |||||||||| ||| ||  ||| ||| |||||   |||    
T  20097393 agatataatgacacatcttatagacaaatatgcaatacactatataatctgacgtggcatgaattaaatacacaaatgcggaatgattgatcatagggtt 20097492  T
Q  216 aacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  20097493 aacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 33036106 - 33036252
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||| | ||  |||||||||||||||| || ||||||| ||| ||||| |||    
T  33036106 aaagatataatgacaaaccttataggcaaatgtgcaatacacaatataatctaacgtaacatggattaaatacag-aatgctcaatgattgatcataaag 33036204  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| | |  |||||||| ||| | ||||||| ||||||||||||||    
T  33036205 ttaacataaatagaaaagtaattgtgatgactttaccatagaattttc 33036252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 2266760 - 2266902
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||  ||||| | ||||||||||||||||||| ||| ||||||| ||| |  ||        
T  2266760 aaagatataatgacacaccttatagacaaatgtgtaatacaccatgtaatctaacgtggcatggattaaatacacaaatgctcaatgattgacgat---- 2266855  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||| |||||||||||| | |||||||||||||| ||||||    
T  2266856 ttaacttcactagaaaagtcattatcatgacttcaccatataatttt 2266902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 1012440 - 1012367
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  1012440 aaagatataatgacacaccttatgggcaaatgtgcaatacaccatataatctgacgtgacatggattaaataca 1012367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 35021197 - 35021245
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35021197 gttaacttcaccagaaaagtcattttcatgacttcaccatagaattttc 35021245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 2704630 - 2704513
Alignment:
Q  138 ggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcattt 237  Q
    |||||||||||||||||||||| |||  || ||| | || |||||||||| |||   ||||| ||| |||||    ||||||||||||||||||||||||    
T  2704630 ggcaaatgtgcaatacaccatataat--gacgtgacgtgaattaaatacacaaatattcaatgattgatcat----ttaacttcaccagaaaagtcattt 2704537  T
Q  238 ttatgacttcaccatagaattttc 261  Q
    | |||||||||||||| |||||||    
T  2704536 tcatgacttcaccataaaattttc 2704513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 28293137 - 28293284
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||| ||| | ||||| || |||||||||||||| |||| ||| |||||| ||||||||||||||||   |  |||||| ||| | |||   |    
T  28293137 aaagatataataacacatcttataggtaaatgtgcaatacatcatataatttgatgtagcatggattaaatacattgatactcaatgattgaccatatgg 28293236  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||  |||||||||| | ||||||||| | ||||||||||    
T  28293237 ttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattttc 28293284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 9743705 - 9743590
Alignment:
Q  141 aaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcattttta 240  Q
    ||||||||||||||||||| ||| ||| ||  ||||||||||||||| ||| | |||||||||  ||||    |||| ||||||| |||||||||||  |    
T  9743705 aaatgtgcaatacaccatataatatgacgttacatggattaaatacacaaatgttcaataattggtcat----ttaatttcaccaaaaaagtcatttaca 9743610  T
Q  241 tgacttcaccatagaatttt 260  Q
    |||||| |||||||||||||    
T  9743609 tgactttaccatagaatttt 9743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 32912742 - 32912790
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  32912742 gttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 32912790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 34361653 - 34361701
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34361653 gttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 34361701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 27396665 - 27396618
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  27396665 gttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 38812260 - 38812307
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttc 38812307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 3042660 - 3042612
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  3042660 gttaacttcaccaaaaaaatcatttttatgatttcaccatagaattttc 3042612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4205165 - 4205117
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||    
T  4205165 gttaacttcatcagaaaagtcattttcctgacttcaccatagaattttc 4205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4396375 - 4396327
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  4396375 gttaacttcactaaaaaagtcatttttatgacttcactatagaattttc 4396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4598042 - 4597994
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  4598042 gttaacttcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 9139296 - 9139248
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  9139296 gttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttc 9139248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 28003152 - 28003196
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  28003152 acttcaccagaaaagtcattctcatgacttcaccatagaattttc 28003196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 30002786 - 30002834
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  30002786 gttaacttcaccagaaaaatcattttaatgacttcaccatagagttttc 30002834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 37663901 - 37663949
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||||    
T  37663901 gttaacttcatcaaaaaagtcattcttatgacttcaccatagaattttc 37663949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 39397967 - 39397919
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  39397967 gttaacttcaccataaaagtcattctaatgacttcaccatagaattttc 39397919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 46884196 - 46884244
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  46884196 gttaacttcgccaaaaaagtcatttttatgacttcactatagaattttc 46884244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 51959990 - 51959922
Alignment:
Q  117 gatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaata 185  Q
    |||||||||||| || |||| |||||||||||||||||||||| ||||||| |||  || |||||||||    
T  51959990 gatataatgacacactttatgggcaaatgtgcaatacaccatataatctgacgtgatatagattaaata 51959922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 38811861 - 38811814
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttc 38811814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 47253798 - 47253751
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  47253798 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 55241267 - 55241314
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||    
T  55241267 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 55241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 36493851 - 36493897
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||    
T  36493851 ttaacttcaccaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 47073655 - 47073704
Alignment:
Q  212 agttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| |||||||||| | ||||||| ||||||||||||||    
T  47073655 agttaacttcaccaaaaaagtcattatcatgactttaccatagaattttc 47073704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 7152268 - 7152316
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| |||||||||||||||   ||||||||||||||||||||||    
T  7152268 gttaactttaccagaaaagtcattagcatgacttcaccatagaattttc 7152316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 7703566 - 7703518
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||||    
T  7703566 gttaacttcaccagaaaagtcattctcatgactttaacatagaattttc 7703518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 17272060 - 17272012
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||    
T  17272060 gttaacttcaccagaaaagtcattcccacgacttcaccatagaattttc 17272012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 19089615 - 19089663
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  19089615 gttaacttcatcaaaaaagttattcttatgacttcaccatagaattttc 19089663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 22729830 - 22729782
Alignment:
Q  139 gcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||||    
T  22729830 gcaaatgtgcaatacaccgtataatttgatgtggcatgcattaaataca 22729782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 22756860 - 22756908
Alignment:
Q  139 gcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||||    
T  22756860 gcaaatgtgcaatacaccgtataatttgatgtggcatgcattaaataca 22756908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 25184162 - 25184114
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  25184162 gttaacttcaccaaaatagtcattctcatgacttcaccatagaattttc 25184114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 29584360 - 29584408
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||    
T  29584360 gttaacttcaccagaaaagtcattcccacgacttcaccatagaattttc 29584408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 35025754 - 35025798
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||    
T  35025754 acttcaccagaaaaatcattttcatgacttcagcatagaattttc 35025798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 38011899 - 38011855
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| | |||| |||||||||||||||||    
T  38011899 acttcaccagaaaagtcattctcatgatttcaccatagaattttc 38011855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47073591 - 47073631
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagaca 41  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  47073591 atgtgaattttggagaagatgaattttgattaaccaagaca 47073631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 55478057 - 55478105
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  55478057 gttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 55478105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 17167762 - 17167715
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||| |||||||||||||||  | ||||||||||||||||||    
T  17167762 gttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 17173339 - 17173292
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||| |||||||||||||||  | ||||||||||||||||||    
T  17173339 gttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 34948259 - 34948306
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  34948259 gttaacttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 37775716 - 37775669
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  37775716 taacttcaccaaaaaaatcattttaatgacttcaccgtagaattttct 37775669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 52516646 - 52516599
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| |||||||||| | |||||||||||||| ||||||    
T  52516646 gttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 5915802 - 5915844
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||||||||| ||||||| | ||||||||||||||||||    
T  5915802 acttcaccagaaaaatcattttaacgacttcaccatagaattt 5915844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 54995703 - 54995846
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||||||| |||| || |||| | ||||||||||||||| |||| || ||||  || ||||||||||||||  ||| |  |||| |||   |||        
T  54995703 aaagatataaagacacacattatggacaaatgtgcaatacatcatataacctgacatgacatggattaaatacgcaaatgtacaatgattggccat---- 54995798  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||||| | ||||||||| | ||||||||||    
T  54995799 ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaattttc 54995846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 49376016 - 49375967
Alignment:
Q  213 gttaacttcaccagaaaa-gtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||||||||    
T  49376016 gttaacttcaccagaaaaagtcattctcatgacttcaccgtagaattttc 49375967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 25701219 - 25701267
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| |||| |||||||||| | |||||||||||||| |||||||    
T  25701219 gttaactttaccaaaaaagtcattatcatgacttcaccataaaattttc 25701267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 42063050 - 42063006
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||    
T  42063050 taacttcaccaaaaaagtcaattgaatgacttcaccatagaattt 42063006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 47028147 - 47028103
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||    
T  47028147 taacttcaccaaaaaagtcaattgaatgacttcaccatagaattt 47028103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 50697287 - 50697243
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| | |||| ||||||||||||||||||| ||||||||||    
T  50697287 acttcactaaaaaaatcatttttatgacttcaccgtagaattttc 50697243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 53124336 - 53124288
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||||| ||||||||| |||| |||||||    
T  53124336 gttaacttcaccaaaaaaatcattttaatgacttcatcatataattttc 53124288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 22963661 - 22963401
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcaatat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22963661 atgtgaattttggagaagatgaattttgattaagcaagacagtatggttggtgttggagcagatgaatttcggagagaaagggatgaacaaaatcgatat 22963562  T
Q  101 ggnnnnnnngatgaaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaata 200  Q
    ||       ||||||||||||||||||| ||||||    ||||| || | ||||||||| ||||||| || |||| ||||||||||| ||||||| |||     
T  22963561 ggaaaaaaagatgaaagatataatgacacaccttaagaacaaatatgtagtacaccatataatctgacgttgcattgattaaatacacaaaagctaaatg 22963462  T
Q  201 attaatcatgaagttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||  ||||    ||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  22963461 attggtcataggattaactttaccagaaaagtcattcttatgacttcaccataaaattttc 22963401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 22997816 - 22998076
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcaatat 100  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  22997816 atgtgagttttggagaagatgaattttgattaagcaagacagtatggttggtgttggagcagatgaatttcggagagaaagggatgaacaaaatcgatat 22997915  T
Q  101 ggnnnnnnngatgaaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaata 200  Q
    ||       |||||||||||||| |||| ||||||    ||||| || | ||||||||| ||||||| || |||| ||||||||||| ||||||| |||     
T  22997916 ggaaaaaaagatgaaagatataacgacacaccttaagaacaaatatgtagtacaccatataatctgacgttgcattgattaaatacacaaaagctaaatg 22998015  T
Q  201 attaatcatgaagttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||  ||||    ||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  22998016 attggtcataggattaactttaccagaaaagtcattcttatgacttcaccataaaattttc 22998076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 260
Target Start/End: Complemental strand, 41644016 - 41643874
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||   |||||||||||||||||||| ||||||| ||| |||| |||||||||| ||| ||||||| ||| | |||        
T  41644016 aaagatataatgacacaccttatgatcaaatgtgcaatacaccatataatctgacgtgacatgaattaaatacacaaatgctcaatgattgaccat---- 41643921  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttt 41643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 6177915 - 6177776
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| ||||||| |||||||| ||||||||||||| ||||||| ||| |||| |||||||||| ||| ||||||| ||| | |||    ||||    
T  6177915 atataatgacataccttatgggcaaatgcgcaatacaccatataatctgacgtgacatgaattaaatacacaaatgctcaatgattgaccat----ttaa 6177820  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||| | |||||||| || ||||||||||    
T  6177819 cttcaccagaaaagtcattctcatgacttcgccgtagaattttc 6177776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 18947530 - 18947642
Alignment:
Q  142 aatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcatttttat 241  Q
    ||||| |||||||||||| ||||||| ||| ||||||||||||||| ||| | ||||| ||| | |||    ||||||||||||||||||| ||||| ||    
T  18947530 aatgtacaatacaccatataatctgacgtgacatggattaaatacacaaatgttcaatgattgaccat----ttaacttcaccagaaaagttattttcat 18947625  T
Q  242 gacttcaccatagaatt 258  Q
    |||||||||||||||||    
T  18947626 gacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 34441827 - 34441968
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||||||| |||| | ||||| |||||||||||||||||||||| |||  || ||| |||| |||||||||| |||   |||||||||  ||||        
T  34441827 aaagatataacgacacatcttatgggcaaatgtgcaatacaccatataat--gacgtgacatgaattaaatacacaaatattcaataattggtcat---- 34441920  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttc 34441968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 30844991 - 30844850
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||| |||||||| | ||||| | ||||||||||||| | |||| ||||||| ||| |||||||||||||||| || ||||||| ||| ||||||       
T  30844991 aaagatttaatgacacatcttatggacaaatgtgcaatatatcatataatctgacgtgacatggattaaatacag-aatgctcaatgattgatcatggga 30844893  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaa 256  Q
    |||||||||||  |||||||||| | || ||||||||||||||    
T  30844892 ttaacttcaccttaaaagtcattctcataacttcaccatagaa 30844850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 272
Target Start/End: Complemental strand, 42005530 - 42005379
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||| |||||||| ||||||| ||||| |||||||||||||||| |||  || ||| ||||||||||||| | |||   |||||  || |||||        
T  42005530 aaagatgtaatgacacaccttatgggcaa-tgtgcaatacaccatataat--gacgtgacatggattaaataaacaaatattcaatggttgatcat---- 42005438  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttttaat 272  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||    
T  42005437 ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttctattttttaat 42005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 19073498 - 19073358
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| ||||||| | |||||||| ||||||||||| ||||||| ||| ||||||||||||||| |||  |||||| ||| | |||    ||||    
T  19073498 atataatgacacaccttatagacaaatgtggaatacaccatataatctgacgtgacatggattaaatacacaaattctcaatgattgaccat----ttaa 19073403  T
Q  218 cttcacc-agaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| | |||| ||||| | || |||||||||||||||||||    
T  19073402 cttcaccaaaaaaaatcattctcataacttcaccatagaattttc 19073358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 18779328 - 18779435
Alignment:
Q  137 tggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcatt 236  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||||||| ||| ||||||| ||| | |||    ||||||||| ||  |||||||||    
T  18779328 tggcaaatgtgcaataaaccatataatctgatgtgacatgaattaaatacacaaatgctcaatgattgaccat----ttaacttcatcaataaagtcatt 18779423  T
Q  237 tttatgacttca 248  Q
    ||||||||||||    
T  18779424 tttatgacttca 18779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 15650992 - 15650919
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||| ||||| | |||  ||||||||||||||    
T  15650992 aaagatataatgacacaccttatgggcaaatgtgaaatacaccatataatcttacgtgatatggattaaataca 15650919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4166971 - 4166923
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4166971 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttc 4166923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 13711513 - 13711465
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  13711513 gttaacttcaccagaaaagtcattctgatgacttcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 18494422 - 18494470
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  18494422 gttaacttcaccagaaaagtcattttcatgacttcaccacagaattttc 18494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 19313901 - 19313853
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19313901 gttaacttcaccagaaaagtcattctaatgacttcaccatagaattttc 19313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 41465558 - 41465510
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  41465558 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttc 41465510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 27138925 - 27139056
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| || |||| ||||||| ||||||||||| || ||||||| ||| |||||||| |||||| ||| | ||||| |||   |||        
T  27138925 aaagatataatgacacactttatgggcaaatatgcaatacaccgtataatctgacgtgacatggatt-aatacacaaatgatcaatgattggccat---- 27139019  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcacc 250  Q
    ||||||||| || |||||||||||| |||||||||||    
T  27139020 ttaacttcatcaaaaaagtcattttcatgacttcacc 27139056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 35958955 - 35958910
Alignment:
Q  216 aacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  35958955 aacttcaccaaaaaagtcatttttatgacttcatcatagaattttc 35958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 4264231 - 4264279
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  4264231 gttaactttaccagaaaagtcattatgatgacttcaccatagaattttc 4264279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4763677 - 4763629
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  4763677 gttaacttcatcagaaaagtcattttcatgacttcatcatagaattttc 4763629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 26357626 - 26357578
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  26357626 gttaacttcatcagaaaagtcattttcatgacttcaccataaaattttc 26357578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 41960932 - 41960884
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  41960932 gttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttc 41960884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 33660522 - 33660569
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||| || |||||||||||||| |||||||||||||||||||||    
T  33660522 gttaacttaactagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 43446362 - 43446509
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||| ||||| ||| |||  ||||| |||||| |||||||| ||| ||| |||| ||| |||| ||||  ||| | ||||| ||| |||||        
T  43446362 aaagatatagtgacataccctatgagcaaacgtgcaacacaccatataatttgacgtggtatgcattagatacgcaaatgttcaatgattgatcattctc 43446461  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
     ||||||||||  |||||||||| | ||||||||||||||||||||||    
T  43446462 ataacttcaccgaaaaagtcattctcatgacttcaccatagaattttc 43446509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 36642034 - 36641988
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||    
T  36642034 ttaatttcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 5881580 - 5881535
Alignment:
Q  216 aacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||    
T  5881580 aacttcaccagaaaagtcattttaatgacttcacaataaaattttc 5881535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 11366535 - 11366583
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| ||||||| |||||||||| |||||| |||||||||||||||||    
T  11366535 gttaatttcaccaaaaaagtcattcttatgatttcaccatagaattttc 11366583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 17071891 - 17071939
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  17071891 gttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttc 17071939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 19424782 - 19424830
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||| |||| | |||||||||||||| |||||||    
T  19424782 gttaacttcaccagaaaagccattctcatgacttcaccataaaattttc 19424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 33902117 - 33902069
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | | ||||||| ||||||||||||    
T  33902117 gttaacttcaccagaaaagtcattctaacgacttcatcatagaattttc 33902069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 37905757 - 37905710
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  37905757 gttaacttcaccaaaaaa-tcatttttataacttcaccatagaattttc 37905710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 39788580 - 39788624
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttc 39788624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 17054251 - 17054298
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||||    
T  17054251 ttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttc 17054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 19093461 - 19093414
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttc 19093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 29242293 - 29242340
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| ||||  |||||| ||||||||||||||||||||||    
T  29242293 ttaacttcaccaaaaaaaccattttcatgacttcaccatagaattttc 29242340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 31861943 - 31861896
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||||| | || |||||||||||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttc 31861896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 3176987 - 3176941
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||| |||||||||||||||  | ||||||||||||||||||    
T  3176987 ttaacttcatcagaaaagtcattttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 58144 - 58095
Alignment:
Q  140 caaatgtgcaatacaccatacaatctgatgtggcatggattaaatacaga 189  Q
    |||||||||||||||||||| ||| |||| || |||| ||||||||||||    
T  58144 caaatgtgcaatacaccatataatttgatctgacatgaattaaatacaga 58095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 2325524 - 2325572
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| ||||||||||||   || |||||||||||||||||||    
T  2325524 gttaacttcacgagaaaagtcattcacataacttcaccatagaattttc 2325572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 31570888 - 31570936
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| |||||||||||||| ||| | || |||||||||||||||||||    
T  31570888 gttaatttcaccagaaaagttattctcataacttcaccatagaattttc 31570936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 33551140 - 33551188
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| | |||||||||| | ||||||||||| ||||||||||    
T  33551140 gttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttc 33551188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 38250058 - 38250094
Alignment:
Q  130 accttattggcaaatgtgcaatacaccatacaatctg 166  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  38250058 accttattggcaaatgtgcaatacatcatataatctg 38250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 44913710 - 44913663
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| | ||||||||||||  |||||||||||||||||||||    
T  44913710 gttaacttcac-ataaaagtcattttcgtgacttcaccatagaattttc 44913663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 19631893 - 19631750
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||| ||||| | ||| ||||||||||||||| ||| | ||||| |||  ||||        
T  19631893 aaagatataatgaaacaccttataggcaaatgtgcaatacaccatataatctaacgtgacatggattaaatacacaaatgttcaatgattggtcat---- 19631798  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttc 19631750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 11084058 - 11084199
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||| ||  ||| ||| ||||||||||||||| |||   ||||| |||  ||||        
T  11084058 aaagatataatgacacaccttatgggcaaatgtgtaatacaccatataa--tgacgtgacatggattaaatacataaatattcaatgattggtcat---- 11084151  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttc 11084199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 8513282 - 8513234
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  8513282 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttc 8513234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 30353493 - 30353540
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  30353493 gttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 20768131 - 20768086
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||||||||||||| | |||||||||||||||||||||||    
T  20768131 acttcaccagaaaagtcattctcatgacttcaccatagaattttct 20768086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 3880074 - 3880122
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||    
T  3880074 gttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttc 3880122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 4318958 - 4319006
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  4318958 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttc 4319006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 5627440 - 5627392
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  5627440 gttaacttcaccaaaaaagtcattcttatgacttcaccttagaattttc 5627392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 34993975 - 34993907
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaa 182  Q
    ||||||||||| ||| || |||| | |||||||||||||||||||| ||||||||||| |||| |||||    
T  34993975 aaagatataataacatacattatggacaaatgtgcaatacaccatataatctgatgtgacatgaattaa 34993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 6088957 - 6088910
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||    
T  6088957 gttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 6614036 - 6614082
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  6614036 ttaacttcaccagaaaagtcattcttatgatttcaccatataatttt 6614082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 24662187 - 24662237
Alignment:
Q  211 aagttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  24662187 aagttaacttcactagaaaagtcattatcatgactttaccatagaattttc 24662237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 25441003 - 25440961
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  25441003 acttcaccagaaaagtcattttaacgacttcaccatagaattt 25440961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 7055350 - 7055398
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| |||||||||||||||| |||||||    
T  7055350 gttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttc 7055398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 26301923 - 26301970
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| | |||| |||||||||||||||||||||| |||||||    
T  26301923 ttaacttcacgaaaaaaatcatttttatgacttcaccatataattttc 26301970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1945883 - 1945834
Alignment:
Q  213 gttaacttcaccagaaaa-gtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| |||||| ||||||||||||| ||||||||||    
T  1945883 gttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaattttc 1945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 3005393 - 3005441
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||| || |||||||||| | ||||||||| |||||||||||||    
T  3005393 ttaacttcatcaaaaaagtcattctcatgacttcaacatagaattttct 3005441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 4102864 - 4102920
Alignment:
Q  148 caatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataatta 204  Q
    |||||||||||| ||| ||||||||||| ||||||||||| ||| | ||||| ||||    
T  4102864 caatacaccatataatatgatgtggcatagattaaatacacaaatgttcaatgatta 4102920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 7235173 - 7235217
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| ||||||||||| | || |||||||||||||||||||    
T  7235173 acttcaccggaaaagtcattctcataacttcaccatagaattttc 7235217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 18498482 - 18498434
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| ||||||||| | |||||||||| ||||| |||||    
T  18498482 gttaacttcaccaggaaagtcattctcatgacttcactatagatttttc 18498434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 40640542 - 40640681
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| | ||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||| ||| ||||||| ||| | |||    ||||    
T  40640542 atataatgacacatcttatgggcaaatgtgcaatacaccatataatatgacgtgacatggattaaatacacaaatgctcaatgattgaccat----ttaa 40640637  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  40640638 cttcaccagaaaagtcattctcatgacttcaccatagaattttc 40640681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 19606818 - 19606961
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||| |  |||||| |||||||||||| ||||||| ||| | || |||||||||| ||| ||||||| |||  ||||        
T  19606818 aaagatataatgacacaccttatggaaaaatgttcaatacaccatataatctgacgtgacctgaattaaatacacaaatgctcaatcattggtcat---- 19606913  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  19606914 ttaacttcaccagaaaagtcatttttataacttcaccatagaattttc 19606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 49359532 - 49359675
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||  |||||||||||||||| |||| ||| ||| ||| ||||||||||||||| ||| | ||||| |||   |||        
T  49359532 aaagatataatgacacaccttatgagcaaatgtgcaatacatcatataatatgacgtgtcatggattaaatacacaaatgttcaatgattggccat---- 49359627  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttc 49359675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 45879428 - 45879545
Alignment:
Q  140 caaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcattttt 239  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| |||   |||    ||||||| ||||||||||||||| |     
T  45879428 caaatgtgcaatacaccatataatctgacgtggcatggattaaatacacaaatgctcaatgattggccat----ttaactttaccagaaaagtcattctc 45879523  T
Q  240 atgacttcaccatagaattttc 261  Q
    ||||||||| ||||||||||||    
T  45879524 atgacttcagcatagaattttc 45879545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 42204711 - 42204620
Alignment:
Q  4 tgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatc 95  Q
    ||||||||||||||||||||| |||||| ||||||||  |||| || |||||||||||||| | ||| ||||||||||||||||||||||||    
T  42204711 tgaattttggagaagatgaattttgattgagcaagacggtatggtttgtgttggagcagatgagttttggagagaaagggatgaacaaaatc 42204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 42204489 - 42204343
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||| ||||| |||||||  | |||| |||||||||||||| |||| |||||| ||| ||||||||||| ||| ||||||||||   ||||   |    
T  42204489 aaagatata-tgacacaccttatgagtaaatatgcaatacaccatataatccgatgtgacatagattaaatacacaaatgctcaataataggtcatatgg 42204391  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||||||||||||| | | |||||||| |||||||||||    
T  42204390 ttaacttcatcagaaaagtcattctcacgacttcacgatagaattttc 42204343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 7568623 - 7568766
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| || ||||  |||||||||||||||  |||| ||||||| ||| |||| |||||||||| ||| ||||||| ||| | |||        
T  7568623 aaagatataatgacacactttatgtgcaaatgtgcaatactgcatataatctgacgtgacatgaattaaatacacaaatgctcaatgatttaccat---- 7568718  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||| ||||| ||||||||| ||| || |||||    
T  7568719 ttaacttcaccaaaaaagtaattttcatgacttcatcattgagttttc 7568766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 4556689 - 4556543
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaa----atacagaaaagctcaataattaatcat 209  Q
    ||||||||||||||| || ||||  ||||||||||||||| ||||| ||||||| ||| |||| |||||    ||||| |||  |||||| |||  ||||    
T  4556689 aaagatataatgacacacattatgagcaaatgtgcaatacgccatataatctgacgtgacatgaattaattaaatacacaaatactcaatgattggtcat 4556590  T
Q  210 gaagttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
      ||| |||||||| |||||||||||||| ||||||||||||||||||||    
T  4556589 --agt-aacttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 38392536 - 38392673
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| || |||| ||||||||||||||||| |||| ||||||   || ||||||||||||||| ||| | ||||| | | | |||    ||||    
T  38392536 atataatgacacacattatgggcaaatgtgcaatacatcatataatctgtcatgacatggattaaatacacaaatgttcaatgactgaccat----ttaa 38392631  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||| |||||||||| | |||||||||||||| |||||    
T  38392632 cttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 47930597 - 47930713
Alignment:
Q  140 caaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcattttt 239  Q
    |||| ||||||||||||||| |||| ||| |  ||||||||||||||| ||| | ||||| |||  ||||    ||||||||||||||||| |||||||     
T  47930597 caaaggtgcaatacaccatataatc-gatataacatggattaaatacacaaatgttcaatgattggtcat----ttaacttcaccagaaaaatcattttc 47930691  T
Q  240 atgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||    
T  47930692 atgacttcaccatagaattttc 47930713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 46297898 - 46297945
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  46297898 gttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 53811880 - 53812023
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||   |||||||| ||||||||||| ||||||| ||| ||||||||||||||| ||| | ||    | | | |||        
T  53811880 aaagatataatgacacaccttatgtacaaatgtggaatacaccatataatctgacgtgacatggattaaatacataaatgttc----actgaccatagca 53811975  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||||||||||||| | ||||||||||| ||||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttc 53812023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 35844366 - 35844318
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  35844366 gttaacttcaccagaaaagtcattatcatgacttcaccatagaattttc 35844318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 29163887 - 29163838
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  29163887 gttaacttcaccagaaaaatcattttaatgacttcaccataaaattttct 29163838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 44880934 - 44880862
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||  |||||| ||| |||||||||||||||    
T  44880934 aaagatataatgacac-ccttatgagcaaatgtgcaatacaccatattatctgacgtgacatggattaaataca 44880862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4015500 - 4015452
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  4015500 gttaacttcatcagaaaagtcattctcatgacttcaccatagaattttc 4015452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 21193646 - 21193598
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  21193646 gttaacttcaccagaaaagtcattctcatgactttaccatagaattttc 21193598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 26941396 - 26941444
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  26941396 gttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttc 26941444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 32180655 - 32180794
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||  | ||||||||||||||  | || ||||||| ||| |||  |||||||||| ||| ||||||| ||||| |||        
T  32180655 aaagatataatgacacacctta--gacaaatgtgcaatac--cgtataatctgacgtgacataaattaaatacacaaatgctcaatgattaaccat---- 32180746  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||| | || |||||||| || |||||||    
T  32180747 ttaacttcactagaaaagtcattctcataacttcaccgtacaattttc 32180794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 37203107 - 37203059
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || |||| ||||||||||||||||||||||||||||||    
T  37203107 gttaacttcatcaaaaaaatcatttttatgacttcaccatagaattttc 37203059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 51213117 - 51213165
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  51213117 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttc 51213165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 55343420 - 55343468
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||    
T  55343420 gttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttc 55343468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 43485451 - 43485333
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| | ||||  ||||||| |||||| ||||||| ||||||| |||||||| ||||||||   ||| | ||||| |||  ||||    ||||    
T  43485451 atataatgacacatcttaggggcaaatatgcaatgcaccatataatctgaagtggcatgaattaaatatgaaaatgttcaatgattggtcataggattaa 43485352  T
Q  218 cttcaccagaaaagtcatt 236  Q
    |||||||||||||||||||    
T  43485351 cttcaccagaaaagtcatt 43485333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 11835742 - 11835791
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||||||| |||| ||||| | |||||||||||||||||||||||    
T  11835742 gttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttct 11835791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 3655338 - 3655386
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| | || ||||||||||||||||||||||||||| |||||||    
T  3655338 gttaactttatcaaaaaagtcatttttatgacttcaccataaaattttc 3655386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 7758327 - 7758375
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaa 162  Q
    ||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  7758327 aaagatataatgacgcaccttatgggcaaatgtacaatacaccatacaa 7758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 22451004 - 22450960
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||    
T  22451004 acttcaccagaaaaatcattctcatgacttcaccatagaattttc 22450960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 37157748 - 37157700
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || ||||| |||||| ||||||||||||||||||||||    
T  37157748 gttaacttcatcaaaaaagccattttcatgacttcaccatagaattttc 37157700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 40552395 - 40552443
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  40552395 gttaacttctccaaaaaagtcattctcatgacttcaccatagaattttc 40552443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 48354981 - 48354933
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  48354981 gttaacttcaccataaaaatcattctcatgacttcaccatagaattttc 48354933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 11466863 - 11466816
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||||||||||||| | | ||||||||||||||||||||    
T  11466863 ttaacttcatcagaaaagtcattctcaagacttcaccatagaattttc 11466816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 29099395 - 29099356
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccat 252  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  29099395 gttaacttcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 47870335 - 47870289
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccataca 161  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  47870335 aaagatataatgacacaccttat-ggcaaatgtgcaatgcaccataca 47870289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 52041060 - 52041107
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||||    
T  52041060 ttaacttcaccagaaaagtcattctcatgacttcacctcagaattttc 52041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 5124713 - 5124671
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||| |||||||||||| |||| |||||||||||||||    
T  5124713 acttcaccaaaaaagtcattttaatgatttcaccatagaattt 5124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 260
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 39282682 - 39282645
Alignment:
Q  224 cagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  39282682 cagaaaaatcattttcatgacttcaccatagaattttc 39282645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 44891546 - 44891499
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  44891546 gttaacttcacca-aaaagtcattttcatgacttcaccgtataattttc 44891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 22616637 - 22616495
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| ||| ||| ||| |||||||||||||||  || ||||||| |||   |||        
T  22616637 aaagatataatgacacaccttatgggcaaatgtccaatacaccatataatatgacgtgacatggattaaataca-taatgctcaatgattggccat---- 22616543  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttc 22616495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 21320895 - 21320751
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||| | | |||||  |||||| |||||||||||||| |||||||||||||||   |||||||||  || ||||||| ||| |||||        
T  21320895 aaagatataatgatacatcttatatgcaaatatgcaatacaccatataatctgatgtggcattagttaaatacacgaatgctcaatgattgatcat---- 21320800  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  21320799 ttaacttcatcaaaaaagtcatttttattacttcaccatagaattttct 21320751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 10237554 - 10237414
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||| | ||||||| | |||||| ||||||||||||| ||||||| |||  ||| |||||||||| ||| ||||||| ||| | |||    ||||    
T  10237554 atataatgaaataccttatggacaaatgcgcaatacaccatataatctgacgtgaaatgaattaaatacacaaatgctcaatgattgaccat----ttaa 10237459  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||    
T  10237458 cttcactagaaaagtcattttcatgacttcacaatagaattttct 10237414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 25653728 - 25653607
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||  ||| |||||||||| |||  |||||| ||| |||||  ||    
T  25653728 aaagatataatgacacaccttatgagcaaatgtgcaatacaccatacaatctgacgtgatatgaattaaatacacaaatactcaatgattgatcatagag 25653629  T
Q  214 ttaacttcaccagaaaagtcatt 236  Q
    ||||||| |||| ||||||||||    
T  25653628 ttaactttacca-aaaagtcatt 25653607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 36055778 - 36055921
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||  ||||||||| | |||| ||||||| || ||| ||||||| ||| | |||        
T  36055778 aaagatataatgacacaccttatgagcaaatgtgcaatacaccatgtaatctgatgcgacatgaattaaattcacaaatgctcaatgattgaccat---- 36055873  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||| | ||||| |||||||| |||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttc 36055921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21266399 - 21266306
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatc 95  Q
    |||||||||||||| ||||||||| ||||||| |||||||  |||| |||||||||||||| || | ||| ||||||||||||||||||||||||    
T  21266399 atgtgaattttggaaaagatgaattttgatta-gcaagacggtatggttggtgttggagcatatgagttttggagagaaagggatgaacaaaatc 21266306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 31878527 - 31878454
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||| ||||||| ||| |||| ||||||||||    
T  31878527 aaagatataatgacacaccttatagacaaatgtgcaatacaccatataatctgacgtgacatgaattaaataca 31878454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 7693279 - 7693231
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7693279 gttaacttcaccagaaaagtcattttaatgacttcaccatagaattttc 7693231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 31705737 - 31705786
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  31705737 gttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttct 31705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 8742013 - 8742061
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  8742013 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttc 8742061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 260
Target Start/End: Complemental strand, 33163659 - 33163515
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacacc--atacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatga 211  Q
    |||||||||||| || ||||||| |  ||||||||||||||||  ||| ||||||||||||||| ||||||| ||| ||| | | ||| ||||  |||      
T  33163659 aaagatataatggcacaccttatggataaatgtgcaatacaccatatataatctgatgtggcatagattaaacacacaaatgtttaatgattagacat-- 33163562  T
Q  212 agttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
      |||||| ||||  |||| ||||||| |||||||||||||||||||||    
T  33163561 --ttaactccaccgaaaaaatcattttcatgacttcaccatagaatttt 33163515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 12910398 - 12910351
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  12910398 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttc 12910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 10053603 - 10053503
Alignment:
Q  4 tgaattttggagaagatgaatatt---gattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcaatat 100  Q
    ||||||||||||| ||||||| ||   |||||||||||||  |||| ||||||||||||||||  | ||| || |||||||||||| |||||||| ||||    
T  10053603 tgaattttggagaggatgaatttttttgattaagcaagacggtatggttggtgttggagcagacgagttttggggagaaagggatggacaaaatcgatat 10053504  T
Q  101 g 101  Q
    |    
T  10053503 g 10053503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 10053367 - 10053294
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||| |||| || ||  |||||||||||||||    
T  10053367 aaagatataatgacacaccttatgagcaaatgtgcaatacacgatataatccgacgtaacatggattaaataca 10053294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 32563198 - 32563149
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  32563198 gttaacttcatcagaaaaatcattttaatgacttcaccatagaattttct 32563149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 41417483 - 41417625
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||| ||||||| |||||||  |||||| |||||||||||||| |||||||  ||  ||  |||||||||| ||| | ||||| ||||| |||        
T  41417483 aaagataaaatgacacaccttatgagcaaatttgcaatacaccatataatctgacatgatataaattaaatacacaaatgttcaatgattaaccat---- 41417578  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||| |||||| ||||| ||| || ||||||||| ||||||    
T  41417579 ttaacttcactagaaaaatcattcttacgatttcaccatataatttt 41417625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 9200282 - 9200234
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  9200282 gttaacttcaccagaaaagttattttaatgacttcaccataaaattttc 9200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 19119908 - 19119860
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  19119908 gttaacttcaccacaaaagtcattctcatgacttcaccatagaattttc 19119860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 26317810 - 26317858
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  26317810 gttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttc 26317858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 36860472 - 36860424
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  36860472 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttc 36860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 36866811 - 36866763
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  36866811 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttc 36866763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 40133434 - 40133386
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  40133434 gttaacttcaccacaaaagtcattttcgtgacttcaccatagaattttc 40133386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 5112440 - 5112487
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||||||| |||||||||||||| |||||||    
T  5112440 ttaacttcaccaaaaaagtcattttcatgacttcaccataaaattttc 5112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 25501052 - 25501099
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||    
T  25501052 gttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 35504214 - 35504167
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  35504214 taacttcaccaaaaaaatcatttttatgacttcaacatagaattttct 35504167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 7208989 - 7209046
Alignment:
Q  213 gttaacttcaccagaaaa-gtcatttttatgacttcaccatagaattttctgtttttt 269  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||| | ||||||    
T  7208989 gttaacttcaccaaaaaaagtcatttttatgacttcaccgtagaattttttttttttt 7209046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 13380643 - 13380498
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |  |||| || ||||||||||||||||||  | | ||| ||   |  ||||||||||| |||  |||| ||| | |||||   |    
T  13380643 aaagatataatgacatattttatgggtaaatgtgcaatacaccatgtagtatgacgttataaagattaaatacacaaatactcattaagtgatcataggg 13380544  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||||| |||||||||||| | |||||||||||||| |||||    
T  13380543 ttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 1429271 - 1429319
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| || ||||||||| |||||||||||||||| |||||    
T  1429271 gttaacttcaccaaaagagtcattttcatgacttcaccatagatttttc 1429319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 5829946 - 5829898
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  5829946 gttaacttcaccaaaaaaatcatttttacgacttcaccctagaattttc 5829898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 8466794 - 8466746
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||| ||| ||||||||||||    
T  8466794 gttaacttcaccagaaaagtcattctcatgacctcatcatagaattttc 8466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 13956471 - 13956519
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||||||||    
T  13956471 gttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttc 13956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 14409456 - 14409500
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| ||||| | ||||||||||||||||||||||    
T  14409456 acttcaccagaaaaatcattctcatgacttcaccatagaattttc 14409500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 15724539 - 15724491
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | || |||||||||||||||||||    
T  15724539 gttaacttcaccaaaaaagtcattctcataacttcaccatagaattttc 15724491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 22255230 - 22255182
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||| ||||||||||||||||| |||| |||||    
T  22255230 gttaacttcaccaaaaaagttatttttatgacttcaccgtagagttttc 22255182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 25513816 - 25513772
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  25513816 acttcaccagaaaaatcattttaacgacttcaccatagaattttc 25513772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 27330355 - 27330307
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||    
T  27330355 gttaacttcaccagaaaagtcattcccacgacttcaccatagaattttc 27330307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 35511603 - 35511651
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||| |||||||| ||||||||||||||| ||||||    
T  35511603 gttaacttcatcagaaacgtcattttcatgacttcaccataggattttc 35511651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 38528362 - 38528410
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||    
T  38528362 gttaacttcatcagaaaaaccattttcatgacttcaccatagaattttc 38528410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 22019680 - 22019633
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| | || |||||||||||||| ||||    
T  22019680 ttaacttcaccagaaaagtcattctaataacttcaccatagaaatttc 22019633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 35826610 - 35826657
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||||    
T  35826610 ttaacttcacaaaaaaagtcattatcatgacttcaccatagaattttc 35826657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 39572867 - 39572820
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| || |||||||||||| | ||||||||||||||||||||||    
T  39572867 ttaacttaactagaaaagtcattctcatgacttcaccatagaattttc 39572820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 12080911 - 12080969
Alignment:
Q  43 tatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatcaatatg 101  Q
    |||| ||||||||||||||||| ||||| ||||||||| ||||||  |||||| |||||    
T  12080911 tatggttggtgttggagcagatgaattttggagagaaatggatgagaaaaatcgatatg 12080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 12081171 - 12081245
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatc-tgatgtggcatggattaaataca 187  Q
    |||||||||| |||| |||||||  ||||||||| ||||||||||| |||| ||||| | ||||||||| |||||    
T  12081171 aaagatataaggacacaccttataagcaaatgtgtaatacaccatataatcttgatgcgtcatggattatataca 12081245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 17158173 - 17158207
Alignment:
Q  227 aaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||| ||||||||||||||||||||||||||||||    
T  17158173 aaaaatcatttttatgacttcaccatagaattttc 17158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 26411416 - 26411294
Alignment:
Q  139 gcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcatttt 238  Q
    |||||||| |||||||||||| ||| ||| ||| |||| |||||||||| |||   ||||| |||  ||||     | ||||||||| |||| ||||| |    
T  26411416 gcaaatgtacaatacaccatataatttgacgtgacatgtattaaatacataaatattcaatgattggtcattctaatgacttcaccaaaaaaatcattct 26411317  T
Q  239 tatgacttcaccatagaattttc 261  Q
     ||||||||||||||||||||||    
T  26411316 aatgacttcaccatagaattttc 26411294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 27579172 - 27579110
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatg 176  Q
    ||||||||||||||  || |||| ||||||| |||||||||||||| ||||||| ||| ||||    
T  27579172 aaagatataatgacgcactttataggcaaatatgcaatacaccatataatctgacgtgacatg 27579110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 16004502 - 16004551
Alignment:
Q  213 gttaacttcaccagaaaagtc-atttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||| ||| | ||||||| ||||||||||||||    
T  16004502 gttaacttcaccagaaaagtcaattctcatgactttaccatagaattttc 16004551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 22980842 - 22980793
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||||||||||||||||| | || |||||| |||| ||||||||    
T  22980842 gttaacttcaccagaaaagtcattctcataacttcatcataaaattttct 22980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 5748477 - 5748437
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccata 253  Q
    ||||||||||||| |||||||||||| ||||||||| ||||    
T  5748477 gttaacttcaccaaaaaagtcattttcatgacttcatcata 5748437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 5837604 - 5837548
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgtttttt 269  Q
    |||| ||||||||||||||||||| | |||| |||||| |||||||||  |||||||    
T  5837604 gttaccttcaccagaaaagtcattctcatgaattcaccgtagaatttttcgtttttt 5837548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 22974208 - 22974256
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | || |||||||||||||||||||    
T  22974208 gttaacttcaccaaaaaaatcattctcataacttcaccatagaattttc 22974256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 23116348 - 23116396
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||  | |||||||||||| ||||| ||||||||||||||||    
T  23116348 gttaacttcataaaaaaagtcattttcatgacgtcaccatagaattttc 23116396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 254
Target Start/End: Original strand, 22955216 - 22955352
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||| ||| ||| ||| ||||||||||||||| ||| | ||||||||| | |||        
T  22955216 aaagatacaatgacataccttatgagcaaatgtgcaatacaccatataatttgacgtgacatggattaaatacacaaatgttcaataattgaccat---- 22955311  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatag 254  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  22955312 ttaacttcaccagaaaagtcattctcattacttcaccatag 22955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 4902465 - 4902341
Alignment:
Q  133 ttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagt 232  Q
    |||| ||||||||||| |||||||||| ||||||| ||| ||||||||||||||| ||| ||||||||||| |||||    |||| ||||||| |||| |    
T  4902465 ttatgggcaaatgtgctatacaccatataatctgacgtgacatggattaaatacataaatgctcaataattgatcat----ttaaattcaccaaaaaaat 4902370  T
Q  233 catttttatgacttcaccatagaattttc 261  Q
     ||||| |||||||||||||| |||||||    
T  4902369 tattttcatgacttcaccataaaattttc 4902341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 8133466 - 8133608
Alignment:
Q  117 gatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagtta 216  Q
    |||||||||||| |||||||  ||||| ||||||||||||||| ||||||| ||| | || |||||||||| ||| ||| ||| ||| |||||    |||    
T  8133466 gatataatgacagaccttataagcaaacgtgcaatacaccatataatctgacgtgtcttgaattaaatacacaaatgcttaatgattgatcat--tttta 8133563  T
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| |||||| ||| ||||||||||||  ||||||||||    
T  8133564 acttcaccaaaaaagttattcttatgacttcacagtagaattttc 8133608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 37854200 - 37854326
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||  ||| |||||||  ||||||||||||||||||||| ||| ||| ||| ||||||||||||||| ||| ||||||||||| | |||        
T  37854200 aaagatataa--acataccttatgagcaaatgtgcaatacaccatataatgtgacgtgacatggattaaatacacaaatgctcaataattgaccat---- 37854293  T
Q  214 ttaacttcaccagaaaagtcatttttatgactt 246  Q
    |||| |||||||||||||||||| | |||||||    
T  37854294 ttaatttcaccagaaaagtcattctcatgactt 37854326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 23402279 - 23402418
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| | ||||| | |||||| ||||||||||||| ||| ||| ||| |||| |||||||||| | | | ||||| ||| | |||    ||||    
T  23402279 atataatgacatatcttatggacaaatgcgcaatacaccatataatatgacgtgacatgaattaaatacacagatgttcaatgattgaccat----ttaa 23402374  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||| | |||||||| |||||||||||||    
T  23402375 cttcaccagaaaagtcattctcatgacttcgccatagaattttc 23402418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 248
Target Start/End: Complemental strand, 7743063 - 7742933
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||||||||||||  |||||| | ||||||| |||||||||||| ||||| | ||| ||| ||||||||||| |||  |||||| ||| |||||        
T  7743063 aaagatataatgacacgccttatggacaaatgtacaatacaccatataatctaacgtgacatagattaaatacacaaatactcaatgattgatcat---- 7742968  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttca 248  Q
    || |||||| || ||||||||||||||||||||||    
T  7742967 tttacttcatcaaaaaagtcatttttatgacttca 7742933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 17842723 - 17842771
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17842723 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttc 17842771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 37109896 - 37109848
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37109896 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttc 37109848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 24211765 - 24211710
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttt 268  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  24211765 gttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcttttttt 24211710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 4582942 - 4582895
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  4582942 ttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttc 4582895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 8299239 - 8299192
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  8299239 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 260
Target Start/End: Complemental strand, 19786428 - 19786282
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| ||||||  | |||||||||||| || |||| ||| ||| |||||||| |||||||||| ||| ||||||| | ||  |||        
T  19786428 aaagatataatgacacaccttacagacaaatgtgcaatgcatcatataatatgacgtggcatgaattaaatacacaaatgctcaattagtagacatatga 19786329  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||| |  |||||||||||| | ||||||||| | |||||||||    
T  19786328 ttaacttaataagaaaagtcattctcatgacttcatcgtagaatttt 19786282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 49002368 - 49002297
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    |||||||||||||||  |||||  || ||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  49002368 aaagatataatgaca--ccttaagggaaaatgtgcaatacaccatataatctgatatggtatggattaaataca 49002297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 38258569 - 38258520
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  38258569 gttaacttcaccaaaaaaatcatttttatgacttcaccgtagaattttct 38258520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 241024 - 241068
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttc 241068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 5657618 - 5657666
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  5657618 gttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 5657666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 6546543 - 6546495
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  6546543 gttaacttcactagaaaaatcattcttatgacttcaccatagaattttc 6546495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 12165776 - 12165728
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  12165776 gttaacttcaccagaaaagtcattttaacgacttcaccgtagaattttc 12165728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 18797353 - 18797305
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  18797353 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttc 18797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 26524464 - 26524512
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  26524464 gttaacatcaccagaaaagtcattctcatgacttcaccatagaattttc 26524512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 27283768 - 27283720
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  27283768 gttaacttcaccaaaaaaatcatttttataacttcaccatagaattttc 27283720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32432481 - 32432433
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  32432481 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttc 32432433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 32821190 - 32821238
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  32821190 gttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttc 32821238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 4618685 - 4618801
Alignment:
Q  140 caaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcattttt 239  Q
    |||||||||||||||||||| ||| ||| | | |||| |||||||||| ||| | ||||| |||| ||||    ||||||| |||| |||| |||||||     
T  4618685 caaatgtgcaatacaccatataatttgaagcgacatgaattaaatacacaaatgttcaatgattagtcat----ttaactttaccaaaaaaatcattttc 4618780  T
Q  240 atgacttcaccatagaatttt 260  Q
    ||||||| ||| |||||||||    
T  4618781 atgactttaccgtagaatttt 4618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 23111214 - 23111167
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  23111214 gttaacttcaccagaaaaatcattttcatgacttcaccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 31520861 - 31520918
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttttaa 271  Q
    |||||||||||| |||||||||||| ||||||||| |||| ||||||| ||| |||||    
T  31520861 ttaacttcaccaaaaaagtcattttcatgacttcatcataaaattttccgttatttaa 31520918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 48928704 - 48928749
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||    
T  48928704 acttcaccagaaaagtcattctcatgacttcaccataaaattttct 48928749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 8861309 - 8861261
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| | |||||||||||| | ||||||||||||||||||||||    
T  8861309 gttaacttcgcgagaaaagtcattctcatgacttcaccatagaattttc 8861261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 31579206 - 31579254
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||||    
T  31579206 gttaacttcaccaaaaaaattattcttatgacttcaccatagaattttc 31579254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 43686065 - 43686017
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  43686065 gttaacttcacccaaaaagtcattttcgtgacttcaccatagaattttc 43686017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 10359360 - 10359399
Alignment:
Q  222 accagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  10359360 accagaaaagtcattatcatgacttcaccatagaattttc 10359399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 25691682 - 25691729
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||    
T  25691682 gttaacttcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 37347045 - 37346998
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||| ||||||| |||||||||||||| |||||||    
T  37347045 ttaacttcaccaaaaaaatcattttcatgacttcaccataaaattttc 37346998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 40381988 - 40381941
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||| | || |||||||| ||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttc 40381941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 10675331 - 10675377
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||| |||| ||||||||||||| | ||||||||||||||||||||    
T  10675331 gttaatttcatcagaaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 30055536 - 30055502
Alignment:
Q  227 aaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||||||||||||||    
T  30055536 aaaagtcattcttatgacttcaccatagaattttc 30055502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 12390767 - 12390815
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||  | | ||||||||||||||||||||||    
T  12390767 gttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattttc 12390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 15612895 - 15612943
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| ||||| || ||| | ||||||||||||||||||||||    
T  15612895 gttaacttcacaagaaacgttattctcatgacttcaccatagaattttc 15612943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 21991660 - 21991612
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | ||||||||||| ||||||||||    
T  21991660 gttaacttcaccataaaaatcattctcatgacttcaccctagaattttc 21991612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 34095888 - 34095932
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||    
T  34095888 taacttcaccaaaaaagtcaattgaatgacttcaccatagaattt 34095932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 13876827 - 13876966
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| || |||| |||||||||| |||||||||||  || ||| ||||||| ||||||||||| |||  |||||| ||| |||||    ||||    
T  13876827 atataatgacacactttatgggcaaatgtgtaatacaccatatgatatgacgtggcattgattaaatacacaaatactcaatgattgatcat----ttaa 13876922  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| |||||||||||| || |||||||||||||||||||    
T  13876923 cttcaccataaaagtcattttcataacttcaccatagaattttc 13876966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17695675 - 17695769
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatgtttggtgttggagcagattaatttcggagagaaagggatgaacaaaatc 95  Q
    |||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||||||   ||| ||||||||||| ||||||||||||    
T  17695675 atgtgaattttggagaagatgaattttgattaagcaagacgatatgattggtgttggagcagatgggttttggagagaaaggaatgaacaaaatc 17695769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 16132619 - 16132476
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| || ||||  |||||||||||||||||| || ||||| | || |||||||||||||||| ||| |||||||||||   |||        
T  16132619 aaagatataatgacacacattatgtgcaaatgtgcaatacaccgtataatctcacgttgcatggattaaatacacaaatgctcaataatttgccat---- 16132524  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||| | |  |||||||||||||||||||||    
T  16132523 ttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttc 16132476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 16127660 - 16127536
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||||||| |||||||  | |||||||||||||| |||| ||||||| ||| ||||||||||||||| ||| | ||||| ||| | |||    ||||    
T  16127660 atataatgacacaccttatgagtaaatgtgcaatacatcatataatctgacgtgtcatggattaaatacacaaatgatcaatgattgaccat----ttaa 16127565  T
Q  218 cttcaccagaaaagtcatttttatgactt 246  Q
    ||||||||||||||||||||| |||||||    
T  16127564 cttcaccagaaaagtcattttcatgactt 16127536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 261
Target Start/End: Complemental strand, 27118474 - 27118331
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||||||||| |||||||   ||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||| |||| || |||||  ||        
T  27118474 aaagatataatgacacaccttatgaacaaatgtgcaatacatcatataatatgacgtggcatggattaaatacataaatgctccatgattaactat---- 27118379  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| | || |||||||||||| ||||||| | |||| |||||||    
T  27118378 ttaactttatcaaaaaagtcattttcatgactttatcataaaattttc 27118331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 10758208 - 10758289
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaat 199  Q
    ||||||||||| ||  ||| ||||||||| |||||||||||| |||||||||||||||| |||||||||| ||| |||||||    
T  10758208 atataatgacacacactataggcaaatgttcaatacaccatataatctgatgtggcatgaattaaatacacaaatgctcaat 10758289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 18422696 - 18422648
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18422696 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttc 18422648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 31804988 - 31805061
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| |  |||| |||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  31804988 aaagatataatgacatatgttatcggcaaatgtgcaatacaccatataatctaacgtggcatagattaaataca 31805061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1547332 - 1547284
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1547332 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttc 1547284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 2959793 - 2959745
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2959793 gttaacttcatcagaaaagtcattttcatgacttcaccatagaattttc 2959745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 10182140 - 10182187
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  10182140 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttc 10182187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 37619027 - 37619084
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgtttttta 270  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||||||  |||||||    
T  37619027 gttaacttcaccaaaaaagtcattcttataacttcaccatagaattttccttttttta 37619084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 4150490 - 4150534
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttc 4150534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 15382978 - 15382930
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  15382978 gttaatttcaccaaaaaagtcatttttataacttcaccatagaattttc 15382930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 16415690 - 16415642
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  16415690 gttaacttcaccagaaaagtcattctcatgacttcaccttagaattttc 16415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 19899900 - 19899948
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  19899900 gttaacttcaccaaaaaaatcattattatgacttcaccatagaattttc 19899948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 30254903 - 30254855
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||||    
T  30254903 gttaacttcatcaaaaaagtcattattatgacttcaccatagaattttc 30254855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 38823259 - 38823211
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  38823259 gttaacttaaccagaaaagtcattctcatgacttcaccatagaattttc 38823211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 15752074 - 15752027
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  15752074 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 28769698 - 28769651
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||    
T  28769698 gttaacttcacaaaaaaagttatttttatgacttcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 34491456 - 34491551
Alignment:
Q  161 aatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaacttcaccagaaaagtcatttttatgacttcaccatagaa 256  Q
    ||||||||||||||||||||||||||| ||| | | ||| ||| |||||  | ||||||||| ||||||| | ||| | || ||||||||||||||    
T  34491456 aatctgatgtggcatggattaaatacacaaatgtttaatgattgatcatagaattaacttcatcagaaaaattattctcatcacttcaccatagaa 34491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 43579290 - 43579243
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttc 43579243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 42721082 - 42721036
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  42721082 taacttcaccaaaaaaatcattttcatgacttcaccatagaattttc 42721036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 3309193 - 3309145
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||||||    
T  3309193 gttaactttaccagaaaagtcattctcatgactttaccatagaattttc 3309145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 8222176 - 8222128
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| | ||| |||||||||||||||||||| ||||||||||    
T  8222176 gttaacttcactaaaaaggtcatttttatgacttcaccgtagaattttc 8222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 21289710 - 21289662
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | |||||||||| ||||| |||||    
T  21289710 gttaacttcaccagaaaagtcattctcatgacttcacaatagatttttc 21289662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 22170799 - 22170751
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  22170799 gttaacttcattagaaaagtcattttcatgatttcaccatagaattttc 22170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 23999392 - 23999344
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| |||||||||||||||| |||||||    
T  23999392 gttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttc 23999344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26970375 - 26970335
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagaca 41  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  26970375 atgtgaattttggagaagatgaattttgattaatcaagaca 26970335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 27227608 - 27227656
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  27227608 gttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 27227656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 30254469 - 30254421
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || |||||||||| |||| |||||||||||||||||||    
T  30254469 gttaacttcaacaaaaaagtcattcttataacttcaccatagaattttc 30254421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 30327083 - 30327131
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| ||||| | ||||||||||||||||||||||| |||||||||||    
T  30327083 gttaaattcacaaaaaaagtcatttttatgacttcactatagaattttc 30327131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32267079 - 32267031
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| | |||||||||| |||||||||||||||| |||||||    
T  32267079 gttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttc 32267031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 34012508 - 34012556
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  34012508 gttaacttcatcataaacgtcattttcatgacttcaccatagaattttc 34012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 48620682 - 48620634
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||| |||||||||||||| || |||||| ||||||||||||    
T  48620682 gttaacttcacaagaaaagtcattttaataacttcaacatagaattttc 48620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 37451331 - 37451292
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccat 252  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  37451331 gttaactttaccaaaaaagtcatttttatgacttcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 28012185 - 28012115
Alignment:
Q  139 gcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcat 209  Q
    ||||||||||||||||||||| ||| | ||||| |||| |||||||||| |||  |||||| | |||||||    
T  28012185 gcaaatgtgcaatacaccatataatttaatgtgacatgcattaaatacacaaatactcaatgaataatcat 28012115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 11742481 - 11742542
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttctgttttttaatca 274  Q
    |||||||||||||||||||||||| | || ||||||| ||| |||||||  ||||| |||||    
T  11742481 gttaacttcaccagaaaagtcattctcataacttcacgataaaattttccttttttcaatca 11742542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 14758082 - 14758037
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttct 262  Q
    |||||||||||||||||||| | ||||||||||| || ||||||||    
T  14758082 acttcaccagaaaagtcattctcatgacttcaccgtaaaattttct 14758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 15964240 - 15964171
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||| | ||||| | |||||||||||||||| ||| ||| ||| ||| ||| |||||||||||    
T  15964240 atataatgacacatcttatggacaaatgtgcaatacactatataatttgacgtgacatagattaaataca 15964171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 25943342 - 25943224
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||||||||| ||  | ||||  ||||| ||||||||||||||| ||||||| ||| | | ||||||||| |  || ||||||||||| |||||        
T  25943342 aaagatataatggcacgcattatcagcaaacgtgcaatacaccatataatctgacgtgacgtcgattaaataaactaatgctcaataattgatcat---- 25943247  T
Q  214 ttaacttcaccagaaaagtcatt 236  Q
    |||||||||| |||||| |||||    
T  25943246 ttaacttcactagaaaattcatt 25943224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 26970311 - 26970262
Alignment:
Q  212 agttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||| |||||||||| | ||||||| |||||| |||||||    
T  26970311 agttaacttcaccaaaaaagtcattatcatgactttaccataaaattttc 26970262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 42663785 - 42663830
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 42663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 7079205 - 7079253
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||| |||||| |||||||    
T  7079205 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttc 7079253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 31621688 - 31621732
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| |||||||||||| | ||||||||||| ||||||||||    
T  31621688 acttcactagaaaagtcattctcatgacttcaccgtagaattttc 31621732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 45319654 - 45319610
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||    
T  45319654 taacttcaccaaaaaagtcaattgaatgacttcaccatagaattt 45319610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 47279204 - 47279160
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| |||||||||| | |||||||||||||||| |||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagatttttc 47279160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 47682624 - 47682672
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||| | | |||||||||||||| |||||||    
T  47682624 gttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttc 47682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 4108818 - 4108959
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||| ||  ||| |||||||  |||||||||| |||   ||||| |||  ||||        
T  4108818 aaagatataacgacacaccttatgggcaaatgtgcaatacaccatataa--tgacgtggcattaattaaatacacaaatattcaatgattggtcat---- 4108911  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||| |||| |||||||||||| |||||||||||||| |||||||    
T  4108912 ttaactttaccaaaaaagtcattttcatgacttcaccataaaattttc 4108959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 1150247 - 1150295
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  1150247 gttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 1150295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 15009290 - 15009242
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  15009290 gttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 15009242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 34895015 - 34894967
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  34895015 gttaacttcatcagaaaagtcattttcatgacttcaccatagaattttc 34894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 35735884 - 35736030
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaag 213  Q
    ||||||||| || || |||||||  ||||||||||||||||||||| ||| | | | | ||   |||||||||| ||| ||||||| |||  || |        
T  35735884 aaagatatagtggcacaccttatgagcaaatgtgcaatacaccatataatttaacgggacacacattaaatacacaaatgctcaatgattcgtcgtatga 35735983  T
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41190953 - 41190998
Alignment:
Q  1 atgtgaattttggagaagatgaatattgattaagcaagacactatg 46  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  41190953 atgtgaattttggagaagatgaattttgattaagcaagacagtatg 41190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 13307671 - 13307623
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  13307671 gttaacttcaccagaaaaatcattctcatgacttcaccatagaattttc 13307623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 16447017 - 16447065
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  16447017 gttaactttatcagaaaagtcattttcatgacttcaccatagaattttc 16447065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 27082980 - 27083028
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||    
T  27082980 gttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttc 27083028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 36695108 - 36695156
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||    
T  36695108 gttaacttcatcagaaaagtcattttcctgacttcaccatagaattttc 36695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 41362566 - 41362518
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||    
T  41362566 gttaacttcaccaaaaaagtcattttcataacttcaccatagaattttc 41362518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 465890 - 465843
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  465890 gttaacttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 6098661 - 6098708
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  6098661 ttaacttcaccaaaaaagttattttcatgacttcaccatagaattttc 6098708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 6446709 - 6446752
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttt 6446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 28220955 - 28221002
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  28220955 ttaacttcaccagaaaagtcattttcatgactttatcatagaattttc 28221002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 23176763 - 23176805
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaa 256  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaa 23176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1204975 - 1204927
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | ||||||||||| || |||||||    
T  1204975 gttaacttcaccagaaaagtcattctcatgacttcaccgtaaaattttc 1204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 10555344 - 10555392
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||| ||||||||||    
T  10555344 gttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttc 10555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 12876157 - 12876109
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  12876157 gttaacttcatcagaaaagtcattttcgtgacttaaccatagaattttc 12876109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 18756571 - 18756642
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatac 186  Q
    ||||||||||||||| | ||||| | ||||||||||||| |||||| ||| ||| || |||||||||||||||    
T  18756571 aaagatataatgacacatcttatagacaaatgtgcaatagaccatataatttgacgt-gcatggattaaatac 18756642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 34952173 - 34952221
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| ||||||||||||||||| ||||||| || |||||||||||    
T  34952173 gttaacttgaccagaaaagtcattttaatgactttactatagaattttc 34952221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 40862467 - 40862419
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| |||||  ||||||||| |||||||||||    
T  40862467 gttaacttcaccagaaaagttattttcgtgacttcactatagaattttc 40862419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 43643737 - 43643785
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  43643737 gttaacttcaccaaaatagtcattctcatgacttcaccatagaattttc 43643785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 7891090 - 7891137
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||| | |||||||||| | |||||||||||||||||||||    
T  7891090 gttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 7998402 - 7998363
Alignment:
Q  222 accagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattttc 7998363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 37970661 - 37970704
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaa 256  Q
    ||||||||||||| |||||||||| | |||||||||||||||||    
T  37970661 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 38110401 - 38110354
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||| ||||||| ||||||| |||||||||||||| |||||||    
T  38110401 ttaacttcatcagaaaaatcattttcatgacttcaccataaaattttc 38110354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 3038550 - 3038465
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaat 199  Q
    ||||||||||||||| ||||||| | || |||||||||||||  || ||||||| ||| |||  |||||||| | ||| |||||||    
T  3038550 aaagatataatgacacaccttatggacagatgtgcaatacactgtataatctgacgtgacataaattaaatagacaaatgctcaat 3038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 5018058 - 5018013
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    |||||||||| | |||||||||| | ||||||||||||||||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 5018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8151412 - 8151453
Alignment:
Q  214 ttaacttcaccagaaaagtcatttttatgacttcaccataga 255  Q
    |||||||||||| |||||||||||| |||||| |||||||||    
T  8151412 ttaacttcaccaaaaaagtcattttcatgactgcaccataga 8151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 34463560 - 34463487
Alignment:
Q  114 aaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaataca 187  Q
    ||||||||||||||| ||| |||   |||| ||||||||||| ||| ||| ||| |||| ||||||||||||||    
T  34463560 aaagatataatgacacaccatatgttcaaacgtgcaatacacaatataatgtgaagtggtatggattaaataca 34463487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 39099262 - 39099299
Alignment:
Q  224 cagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  39099262 cagaaaagtcattctcatgacttcaccatagaattttc 39099299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 4133150 - 4133198
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||| |||||| |||||||    
T  4133150 gttaacttcaccaaaaaagtcattctgatgacttgaccataaaattttc 4133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 5300088 - 5300136
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||  | |||||||||| | ||||||||||||||||||||||    
T  5300088 gttaacttcattaaaaaagtcattctcatgacttcaccatagaattttc 5300136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 16222911 - 16222863
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||| |||||||||||||||||| | |||| |||||| ||||||||||    
T  16222911 gttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttc 16222863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 23854573 - 23854621
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||||||||| | ||||||||||| |||| |||||    
T  23854573 gttaacttcaccaaaaaagtcattctcatgacttcaccgtagacttttc 23854621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 30654725 - 30654773
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||| | |||||||||||||||| |||||||    
T  30654725 gttaacttcaccaaaaaaatcactcttatgacttcaccataaaattttc 30654773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 33906268 - 33906224
Alignment:
Q  217 acttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||| | || | |||||||||||||||||    
T  33906268 acttcaccagaaaagtcattctcataatttcaccatagaattttc 33906224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 38644026 - 38643978
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||| |||| |||||||||| | |||| |||||||||||||||||    
T  38644026 gttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttc 38643978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 41191018 - 41191058
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccata 253  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  41191018 gttaacttcaccaaaaaagtcattttcataacttcaccata 41191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 24725 - 24864
Alignment:
Q  118 atataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataattaatcatgaagttaa 217  Q
    ||||||| ||| ||||||| |||||||| ||||||||||||| ||||||| ||| |||| |||||||||| ||| ||||||| ||| | |||    ||||    
T  24725 atataataacataccttatgggcaaatgcgcaatacaccatataatctgacgtgacatgaattaaatacacaaatgctcaatgattgaccat----ttaa 24820  T
Q  218 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
     |||||||||||| ||||| | || ||||  |||||||||||||    
T  24821 tttcaccagaaaaatcattctcataactttgccatagaattttc 24864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 5735 - 5644
Alignment:
Q  113 gaaagatataatgacaaaccttattggcaaatgtgcaatacaccatacaatctgatgtggcatggattaaatacagaaaagctcaataatta 204  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||| ||||| |  || |||| |||||||||| ||| ||||||| ||||    
T  5735 gaaatatataatgacacaccttataggcaaatgtgcaatacaccatataatctaacatgacatgaattaaatacacaaatgctcaatgatta 5644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 183 - 135
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  183 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttc 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 408705 - 408753
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  408705 gttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttc 408753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 11956 - 11908
Alignment:
Q  213 gttaacttcaccagaaaagtcattttt-atgacttcaccatagaatttt 260  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  11956 gttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 12137 - 12185
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||||||||| | || |||||| ||||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttc 12185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 100870 - 100822
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  100870 gttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 100822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 42397 - 42349
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 261  Q
    |||||||||||||||||| | ||| | |||||||||||||| |||||||    
T  42397 gttaacttcaccagaaaaattattctcatgacttcaccataaaattttc 42349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 7936 - 7889
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    |||||||||| || |||||||||| |||| ||||||||||||||||||    
T  7936 gttaacttcatcaaaaaagtcattcttataacttcaccatagaatttt 7889  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 44006 - 43959
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  44006 gttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 154781 - 154828
Alignment:
Q  213 gttaacttcaccagaaaagtcatttttatgacttcaccatagaatttt 260  Q
    ||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  154781 gttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

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Target: scaffold0662 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 7026 - 6982
Alignment:
Q  215 taacttcaccagaaaagtcatttttatgacttcaccatagaattt 259  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||    
T  7026 taacttcaccaaaaaagtcaattgaatgacttcaccatagaattt 6982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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