View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10148_low_35 (Length: 295)
Name: NF10148_low_35
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 41517096 - 41516810
Alignment:
| Q |
1 |
agtcctgttttgttacaagaaggaattgaacttggtatcccaaaattttcaattacctgcactagaccaaggtggttgcaaaagaatgaaaattgattgt |
100 |
Q |
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| T |
41517096 |
agtcctgttttgttacaagaaggaattgaacttggtatcccaaaattttcaattacctgcgctagaccaaggtgattgcaaaagaatgaaaattgattgt |
41516997 |
T |
|
| Q |
101 |
tataattcaatattagtaacccacaaataaccacaagcattaccaaggggtatatattgcactaaaaatgtattctatcgttgtgccttattcctataag |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41516996 |
tataattcaatataagtaacccacaaataaccacaagcattaccaaggggtatatattgcactaaaaatgtattctatcgttgtgccttattcctataag |
41516897 |
T |
|
| Q |
201 |
ctggcaatagcagatacagttcataacacacgcgcccacaaaatcacagaataagcaatgaattatgctgttttatacacctatgct |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41516896 |
ctggcaatagcagatacagttcataacacacgcgcccacaaaatcacagaataagcaatgaattatgctgttttatacacctgtgct |
41516810 |
T |
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