View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10148_low_38 (Length: 281)
Name: NF10148_low_38
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 8182144 - 8182395
Alignment:
| Q |
18 |
aactatgcataatgtccttgatcatataactagctggcccccatgacacaaaccatttgtactagcttgtaatcttgtgcatgtacttcactggaattga |
117 |
Q |
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| T |
8182144 |
aactatgcataatgtccttgatcatataactagctggcccccatgacacaaaccatttgtactagcttgtaatcttgtgcatgtacttcactggaattga |
8182243 |
T |
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| Q |
118 |
gcatcaaagtagtgtttgatttggtgtcatgagggtcctgaattactcaataatctttaagtgttgggtaaacatacatgaagtggtgacgcacgtgggt |
217 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8182244 |
gcatcagagtagtgtttgatttggtgtcatgagggtcctgaattactcaataatctttaagtgttgggtaaacatacatgaagtggtgacgcacgtgggt |
8182343 |
T |
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| Q |
218 |
tgatatgttagtgtaggcttaagactttgaagtgtgctcctctatcgatctc |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8182344 |
tgatatgttagtgtaggcttaagactttgaagtgtgctcctctatcgatctc |
8182395 |
T |
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