View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10148_low_60 (Length: 228)
Name: NF10148_low_60
Description: NF10148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10148_low_60 |
 | |
|
| [»] chr7 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 8030195 - 8030353
Alignment:
| Q |
70 |
aaatgtgaaatagaatataaaaggggatgtaggaagcgaatcaaaaaccaaaatcatcaccggaatcataaatcgaaataaaaaccgatttgatatagca |
169 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8030195 |
aaatgtgaaatagaatataaaaggggatgtaggaagcgaatcaaaaaccaaaatcatcaccggaatcataaatcgaaatcaaaaccgatttgatatagca |
8030294 |
T |
|
| Q |
170 |
taacttacaatcttcaagcaatgattcagcaacattcagaatggtcctcaatttgcggt |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8030295 |
taacttacaatcttcaagcaatgattcagcaacattcagaatggtcctcaatttgcggt |
8030353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University